MD03G1080200.v1.1

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000190
Physical Location & Seq
Forward (+)
6456917 .. 6459229
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1080200.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGACGTCGCTGCCATGTTCACGAGTACTTCAGGTGAACCGATTAGCGTCACAGCTCGTAACGCCGGCAAAGCCAACACCTCATGAAACAAAACTGCTATCAGATATTGACGACCAGGAAGGCCTTAGGTTTCAAACTCCAGTTCTAATGTCCTACAAAAATAATCCTCTTATACCGAAAGATCGAACCGATCCCGTTAAGGTGCTTAAAGAAGCACTGAGTAAAGCATTGGTGTTTTACTACCCTCTAGCTGGCAGGCTCAGGGAAGGACCTAACAGAAAGCTTATGGTGGAGTGCACTGGAGAAGGTGTGTTGTTCATAGAGGCTGATGCTGATGTAACGCTTGAGCAACTCGGGGATGCACTTGTACCCCCGTGTCCATTCTTAGAGGAGTTCCTATGTGATGCGCCAGGATCTGATGGTATTCTCGGTTGCCCCTTGCTGTTAGTTCAGGTGACCCGTCTGAAATGTGGAGGTTTCATATTTGCATTGCGCATAAACCACACGATGTGTGATGGATTTGGGATGGTCCAGTTCTTGAACGGAGTCGGGGAAATGGCTCATGGTGCACATACACCATCTATTCCGCCTGTGTGGCAGCGTGAGCTCTTTGACGCTCGAAATCCTCTACGAATTACATGTACACATCATGAATACGAGGAAGCGATTGATTCTGATGAGGGCTTGTTTGCGGTTAGAGACCAACAAAACATGGTCCAAAAGTCTTTCTATTTTGGTGCCGAGGAGTTGAACGCCATTCGGAAACATCTTCCAGCACACCATTCTCCTTCCTCCACATTTGACTTGATAACAGCTTGCTTGTGGAAATGTCGAACTCTAGCCCTTGAGATGAATCAGAAAGAGGTTGTGTATATTTCGTGTATATCTACTGCACGAAATGCGCGTCTTCCATTGGGATACTATGGCAATGCATTTGCACTCCCATCCGAAGTTTCAACGGTCGAAAGCTTATGTAAAAATCCGATAGGATATGCGTTGGAGTTGGTCAAGAAGGGGAAAGCTAAAATGAGTGACGAGTACATAAAATCAGTGGCGGACCTTATGGTAATGAGAGGACGACCTGACTTTTCTTCGACAAGGAACTTTGTGGTTGGTGACACAACGCGTGCTGGTTTTGGTGAGGTTGATTTCGGATGGGGGAAGCCGGTGTTTGCTGGACCGGCCAAGTGCGTTAATATGATAAACTTGTATGTTCGGCACAAAAACAAAGAAGAAAATGGGATTCTGGTACTAACATGCTTGCCGCTATCGGCGGTGGAGAGGTTTCAGCAGGAGCTTAAGAGGATGACTGTGGAACCGGTTGAGGATAACACTAAACCTGTTAGGATTAAGTCAACACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

455

Amino Acids

50.54

Weight (kDa)

6.57

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 11 - 434 1.8e-77 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
Acc16I TGCGCA 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 737
AccII CGCG 2 cut(s) 904, 1126
AciI CCGC 5 cut(s) 587, 692, 1055, 1265, 1274
AclWI GGATC 2 cut(s) 185, 421
AcoI YGGCCR 1 cut(s) 1182
AcuI CTGAAG 1 cut(s) 14
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 510
AfaI GTAC 5 cut(s) 27, 369, 643, 1040, 1251
AfiI CCNNNNNNNGG 1 cut(s) 251
AflII CTTAAG 1 cut(s) 1298
AflIII ACRYGT 2 cut(s) 638, 1124
AgeI ACCGGT 1 cut(s) 1318
AgsI TTSAA 4 cut(s) 134, 541, 751, 957
AjnI CCWGG 2 cut(s) 114, 409
AluBI AGCT 8 cut(s) 55, 251, 283, 607, 815, 969, 1022, 1297
AluI AGCT 8 cut(s) 55, 251, 283, 607, 815, 969, 1022, 1297
Alw21I GWGCWC 3 cut(s) 299, 571, 609
Alw26I GTCTC 1 cut(s) 693
Alw44I GTGCAC 2 cut(s) 295, 567
AlwI GGATC 2 cut(s) 185, 421
AlwNI CAGNNNCTG 1 cut(s) 416
Ama87I CYCGRG 1 cut(s) 353
AoxI GGCC 2 cut(s) 121, 1182
ApaLI GTGCAC 2 cut(s) 295, 567
ApeKI GCWGC 2 cut(s) 10, 598
ArsI GACNNNNNNTTYG 2 cut(s) 889, 921
AsiGI ACCGGT 1 cut(s) 1318
AspLEI GCGC 3 cut(s) 409, 495, 904
AspS9I GGNCC 5 cut(s) 269, 529, 715, 1057, 1178
AsuHPI GGTGA 4 cut(s) 46, 466, 1127, 1151
AvaI CYCGRG 1 cut(s) 353
AvaII GGWCC 5 cut(s) 269, 529, 715, 1057, 1178
AxyI CCTNAGG 1 cut(s) 125
BaeGI GKGCMC 2 cut(s) 299, 571
BanI GGYRCC 1 cut(s) 737
BanII GRGCYC 1 cut(s) 609
BauI CACGAG 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 899
Bbv12I GWGCWC 3 cut(s) 299, 571, 609
BbvI GCAGC 1 cut(s) 610
BccI CCATC 6 cut(s) 413, 509, 520, 586, 952, 1149
BciT130I CCWGG 2 cut(s) 116, 411
BciVI GTATCC 1 cut(s) 911
BcoDI GTCTC 1 cut(s) 693
BfaI CTAG 2 cut(s) 248, 839
BfrI CTTAAG 1 cut(s) 1298
BfuI GTATCC 1 cut(s) 911
BglI GCCNNNNNGGC 1 cut(s) 595
BisI GCNGC 3 cut(s) 11, 599, 1265
BlsI GCNGC 3 cut(s) 12, 600, 1266
BmcAI AGTACT 1 cut(s) 27
Bme1390I CCNGG 2 cut(s) 116, 411
Bme18I GGWCC 5 cut(s) 269, 529, 715, 1057, 1178
BmeT110I CYCGRG 1 cut(s) 353
BmgT120I GGNCC 5 cut(s) 269, 529, 715, 1057, 1178
BmiI GGNNCC 2 cut(s) 739, 1317
BmrFI CCNGG 2 cut(s) 116, 411
BmsI GCATC 3 cut(s) 319, 349, 394
BpiI GAAGAC 1 cut(s) 899
BpmI CTGGAG 2 cut(s) 123, 321
Bpu10I CCTNAGC 1 cut(s) 260
BpuEI CTTGAG 2 cut(s) 365, 866
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 693
BsaJI CCNNGG 1 cut(s) 741
BsaWI WCCGGW 1 cut(s) 1318
BsaXI ACNNNNNCTCC 2 cut(s) 294, 324
Bsc4I CCNNNNNNNGG 1 cut(s) 251
Bse118I RCCGGY 4 cut(s) 64, 1165, 1180, 1318
Bse1I ACTGG 3 cut(s) 140, 304, 532
Bse21I CCTNAGG 1 cut(s) 125
Bse3DI GCAATG 2 cut(s) 488, 934
BseBI CCWGG 2 cut(s) 116, 411
BseDI CCNNGG 1 cut(s) 741
BseGI GGATG 5 cut(s) 364, 531, 944, 1160, 1311
BseLI CCNNNNNNNGG 1 cut(s) 251
BseMI GCAATG 2 cut(s) 488, 934
BseMII CTCAG 2 cut(s) 209, 274
BseNI ACTGG 3 cut(s) 140, 304, 532
BseRI GAGGAG 2 cut(s) 404, 758
BseSI GKGCMC 2 cut(s) 299, 571
BseXI GCAGC 1 cut(s) 610
BsgI GTGCAG 1 cut(s) 876
Bsh1236I CGCG 2 cut(s) 904, 1126
Bsh1285I CGRYCG 1 cut(s) 963
BshFI GGCC 2 cut(s) 123, 1184
BshNI GGYRCC 1 cut(s) 737
BshTI ACCGGT 1 cut(s) 1318
BsiEI CGRYCG 1 cut(s) 963
BsiHKAI GWGCWC 3 cut(s) 299, 571, 609
BsiHKCI CYCGRG 1 cut(s) 353
BsiSI CCGG 4 cut(s) 65, 1166, 1181, 1319
BslI CCNNNNNNNGG 1 cut(s) 251
BsmAI GTCTC 1 cut(s) 693
BsnI GGCC 2 cut(s) 123, 1184
Bso31I GGTCTC 1 cut(s) 693
BsoBI CYCGRG 1 cut(s) 353
Bsp1286I GDGCHC 3 cut(s) 299, 571, 609
Bsp1407I TGTACA 1 cut(s) 641
Bsp143I GATC 3 cut(s) 181, 190, 413
BspACI CCGC 5 cut(s) 587, 692, 1055, 1265, 1274
BspANI GGCC 2 cut(s) 123, 1184
BspCNI CTCAG 2 cut(s) 210, 273
BspFNI CGCG 2 cut(s) 904, 1126
BspHI TCATGA 2 cut(s) 82, 649
BspLI GGNNCC 2 cut(s) 739, 1317
BspPI GGATC 2 cut(s) 185, 421
BspT107I GGYRCC 1 cut(s) 737
BspTI CTTAAG 1 cut(s) 1298
BspTNI GGTCTC 1 cut(s) 693
BsrDI GCAATG 2 cut(s) 488, 934
BsrFI RCCGGY 4 cut(s) 64, 1165, 1180, 1318
BsrGI TGTACA 1 cut(s) 641
BsrI ACTGG 3 cut(s) 140, 304, 532
BssAI RCCGGY 4 cut(s) 64, 1165, 1180, 1318
BssECI CCNNGG 1 cut(s) 741
BssMI GATC 3 cut(s) 181, 190, 413
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 21
Bst2BI CACGAG 1 cut(s) 21
Bst2UI CCWGG 2 cut(s) 116, 411
Bst4CI ACNGT 3 cut(s) 961, 1312, 1362
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1298
BstAPI GCANNNNNTGC 1 cut(s) 899
BstAUI TGTACA 1 cut(s) 641
BstC8I GCNNGC 6 cut(s) 66, 253, 257, 817, 1128, 1262
BstDEI CTNAG 4 cut(s) 125, 218, 260, 385
BstEII GGTNACC 1 cut(s) 454
BstF5I GGATG 5 cut(s) 364, 531, 944, 1160, 1311
BstFNI CGCG 2 cut(s) 904, 1126
BstHHI GCGC 3 cut(s) 409, 495, 904
BstKTI GATC 3 cut(s) 184, 193, 416
BstMAI GTCTC 1 cut(s) 693
BstMBI GATC 3 cut(s) 181, 190, 413
BstMCI CGRYCG 1 cut(s) 963
BstMWI GCNNNNNNNGC 7 cut(s) 61, 70, 566, 595, 604, 899, 1181
BstNI CCWGG 2 cut(s) 116, 411
BstNSI RCATGY 2 cut(s) 642, 1260
BstPI GGTNACC 1 cut(s) 454
BstSCI CCNGG 2 cut(s) 114, 409
BstSLI GKGCMC 2 cut(s) 299, 571
BstUI CGCG 2 cut(s) 904, 1126
BstV1I GCAGC 1 cut(s) 610
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 1 cut(s) 413
BstYI RGATCY 1 cut(s) 413
Bsu36I CCTNAGG 1 cut(s) 125
BsuI GTATCC 1 cut(s) 911
BsuRI GGCC 2 cut(s) 123, 1184
BtsCI GGATG 5 cut(s) 364, 531, 944, 1160, 1311
BtsIMutI CAGTG 4 cut(s) 215, 297, 1056, 1358
Cac8I GCNNGC 6 cut(s) 66, 253, 257, 817, 1128, 1262
CaiI CAGNNNCTG 1 cut(s) 416
CciI TCATGA 2 cut(s) 82, 649
CfoI GCGC 3 cut(s) 409, 495, 904
Cfr10I RCCGGY 4 cut(s) 64, 1165, 1180, 1318
Cfr13I GGNCC 5 cut(s) 269, 529, 715, 1057, 1178
CseI GACGC 3 cut(s) 36, 623, 893
Csp6I GTAC 5 cut(s) 26, 368, 642, 1039, 1250
CspAI ACCGGT 1 cut(s) 1318
CviAII CATG 7 cut(s) 15, 83, 563, 639, 650, 712, 1257
CviQI GTAC 5 cut(s) 26, 368, 642, 1039, 1250
DdeI CTNAG 4 cut(s) 125, 218, 260, 385
DpnI GATC 3 cut(s) 183, 192, 415
DpnII GATC 3 cut(s) 181, 190, 413
DraIII CACNNNGTG 1 cut(s) 510
EaeI YGGCCR 1 cut(s) 1182
EciI GGCGGA 2 cut(s) 576, 1070
Ecl136II GAGCTC 1 cut(s) 607
Eco147I AGGCCT 1 cut(s) 123
Eco24I GRGCYC 1 cut(s) 609
Eco31I GGTCTC 1 cut(s) 693
Eco47I GGWCC 5 cut(s) 269, 529, 715, 1057, 1178
Eco53kI GAGCTC 1 cut(s) 607
Eco57I CTGAAG 1 cut(s) 14
Eco81I CCTNAGG 1 cut(s) 125
Eco88I CYCGRG 1 cut(s) 353
Eco91I GGTNACC 1 cut(s) 454
EcoICRI GAGCTC 1 cut(s) 607
EcoO109I RGGNCCY 1 cut(s) 269
EcoO65I GGTNACC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 114, 409
EcoT22I ATGCAT 1 cut(s) 934
EcoT38I GRGCYC 1 cut(s) 609
FaeI CATG 7 cut(s) 18, 86, 566, 642, 653, 715, 1260
FatI CATG 7 cut(s) 14, 82, 562, 638, 649, 711, 1256
Fnu4HI GCNGC 3 cut(s) 11, 599, 1265
FokI GGATG 5 cut(s) 371, 538, 931, 1167, 1318
FriOI GRGCYC 1 cut(s) 609
Fsp4HI GCNGC 3 cut(s) 11, 599, 1265
FspBI CTAG 2 cut(s) 248, 839
FspI TGCGCA 1 cut(s) 494
GlaI GCGC 3 cut(s) 408, 494, 903
GluI GCNGC 3 cut(s) 11, 599, 1265
GsuI CTGGAG 2 cut(s) 123, 321
HaeIII GGCC 2 cut(s) 123, 1184
HapII CCGG 4 cut(s) 65, 1166, 1181, 1319
HgaI GACGC 3 cut(s) 36, 623, 893
HhaI GCGC 3 cut(s) 409, 495, 904
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 7 cut(s) 18, 86, 566, 642, 653, 715, 1260
Hin6I GCGC 3 cut(s) 407, 493, 902
HinP1I GCGC 3 cut(s) 407, 493, 902
HincII GTYRAC 1 cut(s) 1356
HindII GTYRAC 1 cut(s) 1356
HindIII AAGCTT 2 cut(s) 281, 967
HinfI GANTC 4 cut(s) 546, 671, 853, 1243
HpaII CCGG 4 cut(s) 65, 1166, 1181, 1319
HphI GGTGA 4 cut(s) 46, 466, 1127, 1151
Hpy166II GTNNAC 6 cut(s) 20, 37, 297, 569, 644, 1356
Hpy188I TCNGA 9 cut(s) 103, 418, 465, 676, 762, 858, 949, 984, 1154
Hpy188III TCNNGA 5 cut(s) 21, 83, 538, 650, 1009
Hpy8I GTNNAC 6 cut(s) 20, 37, 297, 569, 644, 1356
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 5 cut(s) 113, 260, 299, 798, 1006
HpyCH4III ACNGT 3 cut(s) 961, 1312, 1362
HpyCH4IV ACGT 1 cut(s) 5
HpyCH4V TGCA 7 cut(s) 297, 362, 488, 569, 893, 932, 938
HpyF10VI GCNNNNNNNGC 7 cut(s) 61, 70, 566, 595, 604, 899, 1181
HpyF3I CTNAG 4 cut(s) 125, 218, 260, 385
HpySE526I ACGT 1 cut(s) 5
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 7 cut(s) 18, 86, 566, 642, 653, 715, 1260
HspAI GCGC 3 cut(s) 407, 493, 902
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Kzo9I GATC 3 cut(s) 181, 190, 413
LmnI GCTCC 1 cut(s) 1294
Lsp1109I GCAGC 1 cut(s) 610
LweI GCATC 3 cut(s) 319, 349, 394
MaeI CTAG 2 cut(s) 248, 839
MaeII ACGT 1 cut(s) 5
MaeIII GTNAC 6 cut(s) 48, 58, 337, 454, 1031, 1115
MalI GATC 3 cut(s) 183, 192, 415
MboI GATC 3 cut(s) 181, 190, 413
MboII GAAGA 4 cut(s) 761, 899, 1083, 1244
MflI RGATCY 1 cut(s) 413
MhlI GDGCHC 3 cut(s) 299, 571, 609
MluCI AATT 1 cut(s) 633
MluI ACGCGT 1 cut(s) 1124
MlyI GAGTC 1 cut(s) 555
MmeI TCCRAC 1 cut(s) 978
Mph1103I ATGCAT 1 cut(s) 934
MroNI GCCGGC 1 cut(s) 64
MseI TTAA 5 cut(s) 198, 207, 1194, 1299, 1350
MspCI CTTAAG 1 cut(s) 1298
MspI CCGG 4 cut(s) 65, 1166, 1181, 1319
MspR9I CCNGG 2 cut(s) 116, 411
MvaI CCWGG 2 cut(s) 116, 411
MvnI CGCG 2 cut(s) 904, 1126
MwoI GCNNNNNNNGC 7 cut(s) 61, 70, 566, 595, 604, 899, 1181
NaeI GCCGGC 1 cut(s) 66
NdeII GATC 3 cut(s) 181, 190, 413
NgoMIV GCCGGC 1 cut(s) 64
NlaIII CATG 7 cut(s) 18, 86, 566, 642, 653, 715, 1260
NlaIV GGNNCC 2 cut(s) 739, 1317
NmeAIII GCCGAG 1 cut(s) 766
NmuCI GTSAC 4 cut(s) 48, 454, 1031, 1115
NsbI TGCGCA 1 cut(s) 494
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 2 cut(s) 642, 1260
PagI TCATGA 2 cut(s) 82, 649
PceI AGGCCT 1 cut(s) 123
PciI ACATGT 1 cut(s) 638
PcsI WCGNNNNNNNCGW 1 cut(s) 901
PdiI GCCGGC 1 cut(s) 66
PfeI GAWTC 3 cut(s) 671, 853, 1243
PinAI ACCGGT 1 cut(s) 1318
PkrI GCNGC 3 cut(s) 12, 600, 1266
PleI GAGTC 1 cut(s) 554
PpsI GAGTC 1 cut(s) 554
PpuMI RGGWCCY 1 cut(s) 269
PscI ACATGT 1 cut(s) 638
Psp124BI GAGCTC 1 cut(s) 609
Psp5II RGGWCCY 1 cut(s) 269
Psp6I CCWGG 2 cut(s) 114, 409
PspEI GGTNACC 1 cut(s) 454
PspGI CCWGG 2 cut(s) 114, 409
PspN4I GGNNCC 2 cut(s) 739, 1317
PspPI GGNCC 5 cut(s) 269, 529, 715, 1057, 1178
PspPPI RGGWCCY 1 cut(s) 269
PstNI CAGNNNCTG 1 cut(s) 416
PsuI RGATCY 1 cut(s) 413
RsaI GTAC 5 cut(s) 27, 369, 643, 1040, 1251
RsaNI GTAC 5 cut(s) 26, 368, 642, 1039, 1250
SacI GAGCTC 1 cut(s) 609
SaqAI TTAA 5 cut(s) 198, 207, 1194, 1299, 1350
SatI GCNGC 3 cut(s) 11, 599, 1265
Sau3AI GATC 3 cut(s) 181, 190, 413
Sau96I GGNCC 5 cut(s) 269, 529, 715, 1057, 1178
ScaI AGTACT 1 cut(s) 27
SchI GAGTC 1 cut(s) 555
ScrFI CCNGG 2 cut(s) 116, 411
SduI GDGCHC 3 cut(s) 299, 571, 609
SfaNI GCATC 3 cut(s) 319, 349, 394
SinI GGWCC 5 cut(s) 269, 529, 715, 1057, 1178
SmlI CTYRAG 3 cut(s) 344, 845, 1298
SmoI CTYRAG 3 cut(s) 344, 845, 1298
Sse9I AATT 1 cut(s) 633
SseBI AGGCCT 1 cut(s) 123
SsiI CCGC 5 cut(s) 587, 692, 1055, 1265, 1274
SspMI CTAG 2 cut(s) 248, 839
SstI GAGCTC 1 cut(s) 609
StuI AGGCCT 1 cut(s) 123
StyD4I CCNGG 2 cut(s) 114, 409
TaaI ACNGT 3 cut(s) 961, 1312, 1362
TaiI ACGT 1 cut(s) 8
TaqI TCGA 5 cut(s) 184, 619, 832, 963, 1094
TasI AATT 1 cut(s) 633
TatI WGTACW 3 cut(s) 25, 641, 1038
TauI GCSGC 1 cut(s) 1267
TfiI GAWTC 3 cut(s) 671, 853, 1243
Tru1I TTAA 5 cut(s) 198, 207, 1194, 1299, 1350
Tru9I TTAA 5 cut(s) 198, 207, 1194, 1299, 1350
TscAI CASTG 4 cut(s) 222, 304, 1056, 1365
TseFI GTSAC 4 cut(s) 48, 454, 1031, 1115
TseI GCWGC 2 cut(s) 10, 598
Tsp45I GTSAC 4 cut(s) 48, 454, 1031, 1115
TspDTI ATGAA 5 cut(s) 99, 307, 469, 666, 866
TspGWI ACGGA 1 cut(s) 558
TspRI CASTG 4 cut(s) 222, 304, 1056, 1365
Vha464I CTTAAG 1 cut(s) 1298
VneI GTGCAC 2 cut(s) 295, 567
VpaK11BI GGWCC 5 cut(s) 269, 529, 715, 1057, 1178
XceI RCATGY 2 cut(s) 642, 1260
XspI CTAG 2 cut(s) 248, 839
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 27
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.