Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000190

Physical Location & Seq

Genomic Coordinates Reverse (-)

23990317 .. 23994344

Gene Structure 4028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00236620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGCCCCATTATGCCCTCTCACATTCCAGGTGAATCGCTGCGAGCCGCGACTGATAACACCTGCAAAACCAACACCACATGAAACAAAGCTGCTGTCTGATATCGACGACAGGCAAACCCTCAGGTTCCATGTTCCATTCATCATTTCTTACGAGAACAATCCTTCAATATTGTTGAAACAAAATGACCCTGTTAAGGTGATTAGTGACGCGCTGAGTAGAGCACTGGTGTATTACTATCCTTTGGCCGGTAGACTCAGGGAAGTGCATAACAAAAAGCTTGTGGTGGACTGCACTGGAGAAGGCATCTTGTTCGTCGAGGCTAATGCCAACGTCACGCTCGACGAACTCAAGGATGCAATTCTACCACCTTGTCCATTCCTAGAGGAGTTCCTGTTTAACGTGCCAGGCTCTGATGGTATTCTTGGTTCTCCTTTGTTCTTGATACAGGTAACCCGTCTGACTTGCGGAGGTTTCATATTTGCATTGCTGTTAAACCACCCAATGTGTGACGGATTTGGTTTGGTTCAATTCTTGAACGCTGTAGGCGAGATTGCCCGAGGCGCAGAAGCACCTTCTACTCCACCAGTGTGGGAACGAGAGCTCTTGAACGCCCGAGATCCCCCACGAATTACATGTACACATCATGAATTTGATGATACCATTGATCGCTCGTATCTGAACTCTGCAGCGACGGTCCAACAATCTTTCTGTTTTGGTCCTGAGGAGATAAAGGCCCTTAAAAAGCATCTTCCACCACACCTTTCCACCTGTTCAGCCACATTTGATTTAATAACAGCTTGCGTGTGGAAATGTCGAACAATTTCACTTCAAATGGACCCGAAACAGATTGTCCGTCTGTCATGCATAGCTAATGCACGTGAGTCCGTTGGGATATGCAGTGGAGTTGGTGAAAAATCGAAAGCTAAAATGAGTGAAGAGTACTTAAGATCTGTGGCTGATTTTACGGTCATAAGAGGACGACCTCCACTTGCAATGAATGGCATTAGTGACTTTACAGTTTCGGATAACACACGAACAGGTGCTGGAGAAATTGATTTCGGGTGGGGAAAGCCAATATATGCTGGAGTTGCTAGGTCCACTGATCTGATTAGCTTCTATGTCAAGAAGACAAACAGGGATGAGCAATATGAAGTTCTGGTACCAATATGCTTGCCAGTATCGTCCATGGAGAGGTTTCAGCAAGAGTTCAAGAAGATGATTAGTTTCGACAAAGGCGAGGAATTCCTAGCAATGGAATCCCAAGCAGAAGCTCTTGGACAATTAACAACAGATGATCTTGAAGGAAAGGTGAAGGCTCATTGTCTTGGCTACCCATTCCATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0010327 GO:0010597 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019372 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0071704 GO:1901568

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

449

Amino Acids

49.93

Weight (kDa)

5.67

Isoelectric Point (pI)

40.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	11 - 296	7.3e-57	Transferase family
Transferase	PF02458	299 - 406	2.3e-10	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03480 AT5G17540
fragaria_vesca	FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica	MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica	Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis	pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis	RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata	RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora	Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa	Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha	Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana	Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	70
Acc36I	ACCTGC	1 cut(s)	70
Acc65I	GGTACC	1 cut(s)	1162
AccB1I	GGYRCC	1 cut(s)	1162
AccI	GTMKAC	1 cut(s)	253
AccII	CGCG	2 cut(s)	49, 212
AciI	CCGC	2 cut(s)	47, 468
AclWI	GGATC	1 cut(s)	614
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	2 cut(s)	650, 1244
AcvI	CACGTG	1 cut(s)	881
AfaI	GTAC	3 cut(s)	640, 944, 1164
AfiI	CCNNNNNNNGG	4 cut(s)	196, 248, 1194, 1255
AflII	CTTAAG	1 cut(s)	946
AflIII	ACRYGT	1 cut(s)	635
AgsI	TTSAA	8 cut(s)	168, 178, 530, 538, 610, 833, 1213, 1304
AjnI	CCWGG	2 cut(s)	27, 406
AleI	CACNNNNGTG	1 cut(s)	589
AluBI	AGCT	8 cut(s)	91, 280, 604, 800, 872, 926, 1116, 1274
AluI	AGCT	8 cut(s)	91, 280, 604, 800, 872, 926, 1116, 1274
Alw21I	GWGCWC	2 cut(s)	226, 606
AlwI	GGATC	1 cut(s)	614
AlwNI	CAGNNNCTG	2 cut(s)	413, 1046
Ama87I	CYCGRG	2 cut(s)	558, 615
AoxI	GGCC	3 cut(s)	3, 246, 735
ApeKI	GCWGC	3 cut(s)	39, 91, 689
ApoI	RAATTY	2 cut(s)	650, 1244
ArsI	GACNNNNNNTTYG	2 cut(s)	80, 112
Asp700I	GAANNNNTTC	1 cut(s)	823
Asp718I	GGTACC	1 cut(s)	1162
AspLEI	GCGC	2 cut(s)	214, 566
AspS9I	GGNCC	6 cut(s)	4, 697, 719, 736, 838, 1098
AsuHPI	GGTGA	4 cut(s)	43, 211, 923, 1324
AvaI	CYCGRG	2 cut(s)	558, 615
AvaII	GGWCC	4 cut(s)	697, 719, 838, 1098
AxyI	CCTNAGG	2 cut(s)	122, 723
BanI	GGYRCC	1 cut(s)	1162
BanII	GRGCYC	1 cut(s)	606
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BbrPI	CACGTG	1 cut(s)	881
BbsI	GAAGAC	1 cut(s)	1136
Bbv12I	GWGCWC	2 cut(s)	226, 606
BbvI	GCAGC	3 cut(s)	26, 78, 701
BccI	CCATC	1 cut(s)	410
BcgI	CGANNNNNNTGC	4 cut(s)	295, 308, 329, 342
BciT130I	CCWGG	2 cut(s)	29, 408
BfaI	CTAG	3 cut(s)	383, 1095, 1250
BfmI	CTRYAG	2 cut(s)	543, 687
BfrI	CTTAAG	1 cut(s)	946
BfuAI	ACCTGC	1 cut(s)	70
BglII	AGATCT	1 cut(s)	950
BisI	GCNGC	4 cut(s)	40, 47, 92, 690
BlsI	GCNGC	4 cut(s)	41, 48, 93, 691
BmcAI	AGTACT	1 cut(s)	944
Bme1390I	CCNGG	2 cut(s)	29, 408
Bme18I	GGWCC	4 cut(s)	697, 719, 838, 1098
BmeT110I	CYCGRG	2 cut(s)	558, 615
BmgT120I	GGNCC	6 cut(s)	4, 697, 719, 736, 838, 1098
BmiI	GGNNCC	4 cut(s)	6, 128, 840, 1164
BmrFI	CCNGG	2 cut(s)	29, 408
BmsI	GCATC	3 cut(s)	315, 346, 757
BpiI	GAAGAC	1 cut(s)	1136
BpmI	CTGGAG	3 cut(s)	318, 1068, 1107
BpuEI	CTTGAG	1 cut(s)	335
BsaAI	YACGTR	1 cut(s)	881
BsaJI	CCNNGG	2 cut(s)	559, 1188
BsaXI	ACNNNNNCTCC	2 cut(s)	380, 410
Bsc4I	CCNNNNNNNGG	4 cut(s)	196, 248, 1194, 1255
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	4 cut(s)	231, 301, 587, 1178
Bse21I	CCTNAGG	2 cut(s)	122, 723
Bse3DI	GCAATG	3 cut(s)	485, 1002, 1260
BseBI	CCWGG	2 cut(s)	29, 408
BseDI	CCNNGG	2 cut(s)	559, 1188
BseGI	GGATG	2 cut(s)	361, 1147
BseLI	CCNNNNNNNGG	4 cut(s)	196, 248, 1194, 1255
BseMI	GCAATG	3 cut(s)	485, 1002, 1260
BseMII	CTCAG	4 cut(s)	136, 206, 271, 714
BseNI	ACTGG	4 cut(s)	231, 301, 587, 1178
BseRI	GAGGAG	2 cut(s)	401, 740
BseXI	GCAGC	3 cut(s)	26, 78, 701
BsgI	GTGCAG	1 cut(s)	277
Bsh1236I	CGCG	2 cut(s)	49, 212
BshFI	GGCC	3 cut(s)	5, 248, 737
BshNI	GGYRCC	1 cut(s)	1162
BsiHKAI	GWGCWC	2 cut(s)	226, 606
BsiHKCI	CYCGRG	2 cut(s)	558, 615
BsiSI	CCGG	1 cut(s)	249
BslI	CCNNNNNNNGG	4 cut(s)	196, 248, 1194, 1255
BsnI	GGCC	3 cut(s)	5, 248, 737
BsoBI	CYCGRG	2 cut(s)	558, 615
Bsp1286I	GDGCHC	2 cut(s)	226, 606
Bsp1407I	TGTACA	1 cut(s)	638
Bsp143I	GATC	5 cut(s)	619, 667, 950, 1105, 1297
Bsp19I	CCATGG	1 cut(s)	1188
BspACI	CCGC	2 cut(s)	47, 468
BspANI	GGCC	3 cut(s)	5, 248, 737
BspCNI	CTCAG	4 cut(s)	135, 207, 270, 715
BspFNI	CGCG	2 cut(s)	49, 212
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	4 cut(s)	6, 128, 840, 1164
BspMAI	CTGCAG	1 cut(s)	691
BspMI	ACCTGC	1 cut(s)	70
BspPI	GGATC	1 cut(s)	614
BspT107I	GGYRCC	1 cut(s)	1162
BspTI	CTTAAG	1 cut(s)	946
BsrDI	GCAATG	3 cut(s)	485, 1002, 1260
BsrFI	RCCGGY	1 cut(s)	248
BsrGI	TGTACA	1 cut(s)	638
BsrI	ACTGG	4 cut(s)	231, 301, 587, 1178
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	2 cut(s)	559, 1188
BssMI	GATC	5 cut(s)	619, 667, 950, 1105, 1297
BssT1I	CCWWGG	1 cut(s)	1188
Bst2UI	CCWGG	2 cut(s)	29, 408
Bst4CI	ACNGT	3 cut(s)	697, 970, 1021
Bst6I	CTCTTC	1 cut(s)	933
BstAFI	CTTAAG	1 cut(s)	946
BstAUI	TGTACA	1 cut(s)	638
BstBAI	YACGTR	1 cut(s)	881
BstC8I	GCNNGC	3 cut(s)	44, 802, 1175
BstDEI	CTNAG	4 cut(s)	122, 215, 257, 723
BstDSI	CCRYGG	1 cut(s)	1188
BstEII	GGTNACC	1 cut(s)	451
BstF5I	GGATG	2 cut(s)	361, 1147
BstFNI	CGCG	2 cut(s)	49, 212
BstHHI	GCGC	2 cut(s)	214, 566
BstKTI	GATC	5 cut(s)	622, 670, 953, 1108, 1300
BstMBI	GATC	5 cut(s)	619, 667, 950, 1105, 1297
BstMWI	GCNNNNNNNGC	2 cut(s)	563, 1091
BstNI	CCWGG	2 cut(s)	29, 408
BstNSI	RCATGY	1 cut(s)	639
BstPI	GGTNACC	1 cut(s)	451
BstSCI	CCNGG	2 cut(s)	27, 406
BstSFI	CTRYAG	2 cut(s)	543, 687
BstUI	CGCG	2 cut(s)	49, 212
BstV1I	GCAGC	3 cut(s)	26, 78, 701
BstV2I	GAAGAC	1 cut(s)	1136
BstX2I	RGATCY	2 cut(s)	619, 950
BstXI	CCANNNNNNTGG	1 cut(s)	591
BstYI	RGATCY	2 cut(s)	619, 950
Bsu36I	CCTNAGG	2 cut(s)	122, 723
BsuRI	GGCC	3 cut(s)	5, 248, 737
BtgI	CCRYGG	1 cut(s)	1188
BtsCI	GGATG	2 cut(s)	361, 1147
BtsI	GCAGTG	1 cut(s)	907
BtsIMutI	CAGTG	5 cut(s)	224, 294, 594, 907, 1101
BveI	ACCTGC	1 cut(s)	70
Cac8I	GCNNGC	3 cut(s)	44, 802, 1175
CaiI	CAGNNNCTG	2 cut(s)	413, 1046
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	2 cut(s)	214, 566
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	6 cut(s)	4, 697, 719, 736, 838, 1098
CseI	GACGC	1 cut(s)	218
Csp6I	GTAC	3 cut(s)	639, 943, 1163
CviAII	CATG	7 cut(s)	80, 131, 636, 647, 864, 1189, 1343
CviQI	GTAC	3 cut(s)	639, 943, 1163
DdeI	CTNAG	4 cut(s)	122, 215, 257, 723
DpnI	GATC	5 cut(s)	621, 669, 952, 1107, 1299
DpnII	GATC	5 cut(s)	619, 667, 950, 1105, 1297
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	1 cut(s)	933
EarI	CTCTTC	1 cut(s)	933
Ecl136II	GAGCTC	1 cut(s)	604
Eco130I	CCWWGG	1 cut(s)	1188
Eco24I	GRGCYC	1 cut(s)	606
Eco32I	GATATC	1 cut(s)	103
Eco47I	GGWCC	4 cut(s)	697, 719, 838, 1098
Eco53kI	GAGCTC	1 cut(s)	604
Eco72I	CACGTG	1 cut(s)	881
Eco81I	CCTNAGG	2 cut(s)	122, 723
Eco88I	CYCGRG	2 cut(s)	558, 615
Eco91I	GGTNACC	1 cut(s)	451
EcoICRI	GAGCTC	1 cut(s)	604
EcoO109I	RGGNCCY	1 cut(s)	736
EcoO65I	GGTNACC	1 cut(s)	451
EcoRI	GAATTC	1 cut(s)	1244
EcoRII	CCWGG	2 cut(s)	27, 406
EcoRV	GATATC	1 cut(s)	103
EcoT14I	CCWWGG	1 cut(s)	1188
EcoT22I	ATGCAT	1 cut(s)	869
EcoT38I	GRGCYC	1 cut(s)	606
ErhI	CCWWGG	1 cut(s)	1188
FaeI	CATG	7 cut(s)	83, 134, 639, 650, 867, 1192, 1346
FatI	CATG	7 cut(s)	79, 130, 635, 646, 863, 1188, 1342
FblI	GTMKAC	1 cut(s)	253
Fnu4HI	GCNGC	4 cut(s)	40, 47, 92, 690
FokI	GGATG	2 cut(s)	368, 1154
FriOI	GRGCYC	1 cut(s)	606
Fsp4HI	GCNGC	4 cut(s)	40, 47, 92, 690
FspBI	CTAG	3 cut(s)	383, 1095, 1250
GlaI	GCGC	2 cut(s)	213, 565
GluI	GCNGC	4 cut(s)	40, 47, 92, 690
GsuI	CTGGAG	3 cut(s)	318, 1068, 1107
HaeIII	GGCC	3 cut(s)	5, 248, 737
HapII	CCGG	1 cut(s)	249
HgaI	GACGC	1 cut(s)	218
HhaI	GCGC	2 cut(s)	214, 566
Hin1II	CATG	7 cut(s)	83, 134, 639, 650, 867, 1192, 1346
Hin6I	GCGC	2 cut(s)	212, 564
HinP1I	GCGC	2 cut(s)	212, 564
HindIII	AAGCTT	1 cut(s)	278
HinfI	GANTC	4 cut(s)	34, 255, 884, 1259
HpaII	CCGG	1 cut(s)	249
HphI	GGTGA	4 cut(s)	43, 211, 923, 1324
Hpy166II	GTNNAC	4 cut(s)	254, 289, 641, 1101
Hpy188I	TCNGA	6 cut(s)	100, 415, 462, 681, 1027, 1110
Hpy188III	TCNNGA	8 cut(s)	442, 535, 607, 647, 722, 1126, 1213, 1301
Hpy8I	GTNNAC	4 cut(s)	254, 289, 641, 1101
Hpy99I	CGWCG	4 cut(s)	110, 320, 347, 697
HpyAV	CCTTC	5 cut(s)	174, 296, 585, 1298, 1309
HpyCH4III	ACNGT	3 cut(s)	697, 970, 1021
HpyCH4IV	ACGT	3 cut(s)	333, 402, 880
HpyF10VI	GCNNNNNNNGC	2 cut(s)	563, 1091
HpyF3I	CTNAG	4 cut(s)	122, 215, 257, 723
HpySE526I	ACGT	3 cut(s)	333, 402, 880
Hsp92II	CATG	7 cut(s)	83, 134, 639, 650, 867, 1192, 1346
HspAI	GCGC	2 cut(s)	212, 564
KpnI	GGTACC	1 cut(s)	1166
Kzo9I	GATC	5 cut(s)	619, 667, 950, 1105, 1297
Lsp1109I	GCAGC	3 cut(s)	26, 78, 701
LweI	GCATC	3 cut(s)	315, 346, 757
MaeI	CTAG	3 cut(s)	383, 1095, 1250
MaeII	ACGT	3 cut(s)	333, 402, 880
MaeIII	GTNAC	5 cut(s)	206, 334, 451, 509, 1010
MalI	GATC	5 cut(s)	621, 669, 952, 1107, 1299
MboI	GATC	5 cut(s)	619, 667, 950, 1105, 1297
MboII	GAAGA	4 cut(s)	743, 950, 1141, 1228
MflI	RGATCY	2 cut(s)	619, 950
MhlI	GDGCHC	2 cut(s)	226, 606
MluCI	AATT	8 cut(s)	360, 530, 630, 650, 822, 1053, 1244, 1283
MlyI	GAGTC	2 cut(s)	249, 893
MmeI	TCCRAC	1 cut(s)	724
Mph1103I	ATGCAT	1 cut(s)	869
MroXI	GAANNNNTTC	1 cut(s)	823
MseI	TTAA	7 cut(s)	195, 399, 494, 741, 791, 947, 1286
MslI	CAYNNNNRTG	1 cut(s)	589
MspCI	CTTAAG	1 cut(s)	946
MspI	CCGG	1 cut(s)	249
MspR9I	CCNGG	2 cut(s)	29, 408
MvaI	CCWGG	2 cut(s)	29, 408
MvnI	CGCG	2 cut(s)	49, 212
MwoI	GCNNNNNNNGC	2 cut(s)	563, 1091
NcoI	CCATGG	1 cut(s)	1188
NdeII	GATC	5 cut(s)	619, 667, 950, 1105, 1297
NlaIII	CATG	7 cut(s)	83, 134, 639, 650, 867, 1192, 1346
NlaIV	GGNNCC	4 cut(s)	6, 128, 840, 1164
NmuCI	GTSAC	4 cut(s)	206, 334, 509, 1010
NsiI	ATGCAT	1 cut(s)	869
NspI	RCATGY	1 cut(s)	639
OliI	CACNNNNGTG	1 cut(s)	589
PagI	TCATGA	1 cut(s)	646
PaqCI	CACCTGC	1 cut(s)	70
PciI	ACATGT	1 cut(s)	635
PcsI	WCGNNNNNNNCGW	3 cut(s)	339, 546, 1236
PdmI	GAANNNNTTC	1 cut(s)	823
PfeI	GAWTC	2 cut(s)	34, 1259
PkrI	GCNGC	4 cut(s)	41, 48, 93, 691
PleI	GAGTC	2 cut(s)	249, 892
PmaCI	CACGTG	1 cut(s)	881
PmlI	CACGTG	1 cut(s)	881
PpsI	GAGTC	2 cut(s)	249, 892
Ppu21I	YACGTR	1 cut(s)	881
PscI	ACATGT	1 cut(s)	635
Psp124BI	GAGCTC	1 cut(s)	606
Psp6I	CCWGG	2 cut(s)	27, 406
PspCI	CACGTG	1 cut(s)	881
PspEI	GGTNACC	1 cut(s)	451
PspGI	CCWGG	2 cut(s)	27, 406
PspN4I	GGNNCC	4 cut(s)	6, 128, 840, 1164
PspPI	GGNCC	6 cut(s)	4, 697, 719, 736, 838, 1098
PsrI	GAACNNNNNNTAC	2 cut(s)	412, 444
PstI	CTGCAG	1 cut(s)	691
PstNI	CAGNNNCTG	2 cut(s)	413, 1046
PsuI	RGATCY	2 cut(s)	619, 950
RsaI	GTAC	3 cut(s)	640, 944, 1164
RsaNI	GTAC	3 cut(s)	639, 943, 1163
RseI	CAYNNNNRTG	1 cut(s)	589
SacI	GAGCTC	1 cut(s)	606
SaqAI	TTAA	7 cut(s)	195, 399, 494, 741, 791, 947, 1286
SatI	GCNGC	4 cut(s)	40, 47, 92, 690
Sau3AI	GATC	5 cut(s)	619, 667, 950, 1105, 1297
Sau96I	GGNCC	6 cut(s)	4, 697, 719, 736, 838, 1098
ScaI	AGTACT	1 cut(s)	944
SchI	GAGTC	2 cut(s)	249, 893
ScrFI	CCNGG	2 cut(s)	29, 408
SduI	GDGCHC	2 cut(s)	226, 606
SfaNI	GCATC	3 cut(s)	315, 346, 757
SfcI	CTRYAG	2 cut(s)	543, 687
SinI	GGWCC	4 cut(s)	697, 719, 838, 1098
SmiMI	CAYNNNNRTG	1 cut(s)	589
SmlI	CTYRAG	2 cut(s)	350, 946
SmoI	CTYRAG	2 cut(s)	350, 946
Sse9I	AATT	8 cut(s)	360, 530, 630, 650, 822, 1053, 1244, 1283
SsiI	CCGC	2 cut(s)	47, 468
SspI	AATATT	1 cut(s)	171
SspMI	CTAG	3 cut(s)	383, 1095, 1250
SstI	GAGCTC	1 cut(s)	606
StyD4I	CCNGG	2 cut(s)	27, 406
StyI	CCWWGG	1 cut(s)	1188
TaaI	ACNGT	3 cut(s)	697, 970, 1021
TaiI	ACGT	3 cut(s)	336, 405, 883
TaqI	TCGA	6 cut(s)	105, 318, 342, 817, 920, 1230
TasI	AATT	8 cut(s)	360, 530, 630, 650, 822, 1053, 1244, 1283
TatI	WGTACW	2 cut(s)	638, 942
TauI	GCSGC	1 cut(s)	49
TfiI	GAWTC	2 cut(s)	34, 1259
Tru1I	TTAA	7 cut(s)	195, 399, 494, 741, 791, 947, 1286
Tru9I	TTAA	7 cut(s)	195, 399, 494, 741, 791, 947, 1286
TscAI	CASTG	5 cut(s)	231, 301, 594, 907, 1108
TseFI	GTSAC	4 cut(s)	206, 334, 509, 1010
TseI	GCWGC	3 cut(s)	39, 91, 689
Tsp45I	GTSAC	4 cut(s)	206, 334, 509, 1010
TspDTI	ATGAA	6 cut(s)	96, 130, 466, 663, 1013, 1167
TspGWI	ACGGA	3 cut(s)	528, 845, 877
TspRI	CASTG	5 cut(s)	231, 301, 594, 907, 1108
Vha464I	CTTAAG	1 cut(s)	946
VpaK11BI	GGWCC	4 cut(s)	697, 719, 838, 1098
XapI	RAATTY	2 cut(s)	650, 1244
XceI	RCATGY	1 cut(s)	639
XmiI	GTMKAC	1 cut(s)	253
XmnI	GAANNNNTTC	1 cut(s)	823
XspI	CTAG	3 cut(s)	383, 1095, 1250
ZrmI	AGTACT	1 cut(s)	944
Zsp2I	ATGCAT	1 cut(s)	869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.