Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0000190

Physical Location & Seq

Genomic Coordinates Reverse (-)

1331448 .. 1333919

Gene Structure 2472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g01300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGAAAAGAAACGAATCACATTCACAACGGGTGAAAACTTGGACGGAAGAATCGGGAACCCTATATTAGCATGCATACCACAAAATAAAAGTTCCAAAACCTTTGATCTTTTGCTGGTTCTTAAGCTCGTTAATGAAATGATGCCACTCTCAGTACTTCAGGTGAAACGATTGCAGCCGGAACTTATAACTCCGGCAAAGGCAACGCCTAAGGAAACAAAGTTTCTCTCAGATATTGACGATCAAGAAGGCTTGAGATTTCAGGTTCCAATTATAATGTGTTACAAAGACAACCCTTCACTTAATAAAAATCGTAATCCCGTTAAGGTGATTAGGGAAGCCTTAAGTAGAGCATTAGTGTATTACTACCCTTTAGCTGGAAGGCTTAGGGAAGGGCCTAACAGAAAGCTCATGGTCGATTGCAATGGTGAAGGTATCTTGTTCGTCGAGGCTTCTGCTGATGTCACACTTGAGCAACTAGGAGACAAAATTCTACCCCCTTGTCCACTCTTAGAGGAATTCTTATTTAATTTTCCAGGCTCTGATGGAATTATTGGTTGTCCTTTGCTGCTGGTTCAGGTGACCTGTCTTACATGTGGAGGTTTCATACTTGCATTGCGCCTAAACCACACAATGTATGATGCACCTGGATTGCTCTTGTTCCTGACCGCCATTGCGGAAATGGCAAGAGGTGCACATGCACCATCTATTCTACCAGTGTGGGAGAGAGAGTTGTTGTTCGCTCGAGATCCACCAAGAATTACATGTGCTCATCATGAATATGAAGACGTGATTGATCATTCTAATGACTCATACCCATCTAGTAACCAGTCAAACATGGTTCAACGATCTTTCTACTTTGGTGCCAAGGAGATGAGAGTTCTTCGAAAACAGATTCCACCCCACCTAATTTCCACTTGCTCCACATTTGACTTGGTCACAGCTTGTTTGTGGAAATGTCGCACTCTTGCACTTAAAATTAATCCAAAACAGGCTGTCCGCATTTCATGCACTGTCAATGCACGGGGAAAACACCACATTGTACGTCTTCCCTTGGGATACTATGGCAATGCATTTGCATTTCCAACTGCAATTTCAAAGGCTGAACCTCTATGCAAAAATCCATTGGGATATGCTTTGGAGTTGGTGAAGAAGGCTAAAGCTACCATGAATGAAGAATACTTAAGATCAGTGGCAGATCTTATGGTACTAAGAGGGCGACCTCAATATTCATCGACAGGAAGTTATTTTATAGTTTCTGATACAACACGTGCAGGTTTTGGAGATGTCAATTTTGGATGGGGACAGCCAGTATTTGCTGGACCCGCCAAGGCCTTGGATTTGATTAGCTTCTACGTTCAACACAAAAACGACACCGAGGATGGAATATTGGTACCAATGTGTTTGCCATTCTCGGCCATGGAGAGATTTCAGCAGGAACTAGAGAGGATTACTCAGGAAACTAAGGAGGATTTATGTAACAACCTTAGATCAACTAGGATCAAGTCAATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0010327 GO:0010597 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019372 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0071704 GO:1901568

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

506

Amino Acids

56.65

Weight (kDa)

8.61

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03480 AT5G17540
fragaria_vesca	FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica	MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica	Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis	pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis	RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata	RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora	Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa	Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha	Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana	Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	188, 275
Acc36I	ACCTGC	1 cut(s)	1265
Acc65I	GGTACC	1 cut(s)	1393
AccB1I	GGYRCC	2 cut(s)	863, 1393
AciI	CCGC	4 cut(s)	669, 677, 1000, 1326
AclWI	GGATC	2 cut(s)	743, 1508
AcoI	YGGCCR	1 cut(s)	1416
AcsI	RAATTY	2 cut(s)	489, 518
AcuI	CTGAAG	1 cut(s)	143
AcvI	CACGTG	1 cut(s)	1271
AfaI	GTAC	4 cut(s)	156, 1044, 1209, 1395
AfiI	CCNNNNNNNGG	1 cut(s)	377
AflII	CTTAAG	3 cut(s)	122, 343, 1183
AflIII	ACRYGT	3 cut(s)	593, 764, 1268
AgsI	TTSAA	3 cut(s)	845, 1098, 1361
AjiI	CACGTC	1 cut(s)	790
AjnI	CCWGG	2 cut(s)	535, 646
AjuI	GAANNNNNNNTTGG	2 cut(s)	1078, 1110
AluBI	AGCT	6 cut(s)	127, 377, 409, 944, 1163, 1350
AluI	AGCT	6 cut(s)	127, 377, 409, 944, 1163, 1350
Alw21I	GWGCWC	2 cut(s)	697, 772
Alw26I	GTCTC	1 cut(s)	477
Alw44I	GTGCAC	1 cut(s)	693
AlwI	GGATC	2 cut(s)	743, 1508
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	744
AoxI	GGCC	3 cut(s)	395, 1332, 1416
ApaLI	GTGCAC	1 cut(s)	693
ApeKI	GCWGC	2 cut(s)	175, 568
ApoI	RAATTY	2 cut(s)	489, 518
AseI	ATTAAT	1 cut(s)	981
Asp718I	GGTACC	1 cut(s)	1393
AspLEI	GCGC	1 cut(s)	621
AspS9I	GGNCC	2 cut(s)	395, 1322
AsuHPI	GGTGA	6 cut(s)	44, 175, 340, 440, 592, 1159
AsuII	TTCGAA	1 cut(s)	886
AvaI	CYCGRG	1 cut(s)	744
AvaII	GGWCC	1 cut(s)	1322
AxyI	CCTNAGG	1 cut(s)	210
BaeGI	GKGCMC	1 cut(s)	697
BaeI	ACNNNNGTAYC	2 cut(s)	1385, 1418
BanI	GGYRCC	2 cut(s)	863, 1393
BbrPI	CACGTG	1 cut(s)	1271
BbsI	GAAGAC	2 cut(s)	792, 1040
Bbv12I	GWGCWC	2 cut(s)	697, 772
BbvI	GCAGC	2 cut(s)	187, 555
BccI	CCATC	5 cut(s)	539, 712, 826, 1293, 1376
BcgI	CGANNNNNNTGC	2 cut(s)	437, 471
BciT130I	CCWGG	2 cut(s)	537, 648
BciVI	GTATCC	1 cut(s)	1052
BclI	TGATCA	1 cut(s)	796
BcoDI	GTCTC	1 cut(s)	477
BfaI	CTAG	4 cut(s)	479, 822, 1442, 1497
BfrI	CTTAAG	3 cut(s)	122, 343, 1183
BfuAI	ACCTGC	1 cut(s)	1265
BfuI	GTATCC	1 cut(s)	1052
BglII	AGATCT	1 cut(s)	1198
BisI	GCNGC	2 cut(s)	176, 569
BlsI	GCNGC	2 cut(s)	177, 570
BmcAI	AGTACT	1 cut(s)	156
Bme1390I	CCNGG	2 cut(s)	537, 648
Bme18I	GGWCC	1 cut(s)	1322
BmeT110I	CYCGRG	1 cut(s)	744
BmgBI	CACGTC	1 cut(s)	790
BmgT120I	GGNCC	2 cut(s)	395, 1322
BmiI	GGNNCC	5 cut(s)	59, 267, 865, 1324, 1395
BmrFI	CCNGG	2 cut(s)	537, 648
BmsI	GCATC	2 cut(s)	132, 631
BpiI	GAAGAC	2 cut(s)	792, 1040
BplI	GAGNNNNNCTC	2 cut(s)	1438, 1470
Bpu10I	CCTNAGC	1 cut(s)	386
Bpu14I	TTCGAA	1 cut(s)	886
BpuEI	CTTGAG	2 cut(s)	274, 491
BsaAI	YACGTR	1 cut(s)	1271
BsaJI	CCNNGG	6 cut(s)	867, 1053, 1329, 1335, 1377, 1419
BsaXI	ACNNNNNCTCC	2 cut(s)	716, 746
Bsc4I	CCNNNNNNNGG	1 cut(s)	377
Bse1I	ACTGG	3 cut(s)	716, 829, 1310
Bse21I	CCTNAGG	1 cut(s)	210
Bse3DI	GCAATG	4 cut(s)	430, 614, 672, 1075
BseBI	CCWGG	2 cut(s)	537, 648
BseDI	CCNNGG	6 cut(s)	867, 1053, 1329, 1335, 1377, 1419
BseGI	GGATG	2 cut(s)	1304, 1387
BseLI	CCNNNNNNNGG	1 cut(s)	377
BseMI	GCAATG	4 cut(s)	430, 614, 672, 1075
BseMII	CTCAG	3 cut(s)	165, 243, 1469
BseNI	ACTGG	3 cut(s)	716, 829, 1310
BseSI	GKGCMC	1 cut(s)	697
BseXI	GCAGC	2 cut(s)	187, 555
BsgI	GTGCAG	1 cut(s)	1293
BshFI	GGCC	3 cut(s)	397, 1334, 1418
BshNI	GGYRCC	2 cut(s)	863, 1393
BsiHKAI	GWGCWC	2 cut(s)	697, 772
BsiHKCI	CYCGRG	1 cut(s)	744
BsiSI	CCGG	2 cut(s)	179, 194
BslFI	GGGAC	1 cut(s)	1317
BslI	CCNNNNNNNGG	1 cut(s)	377
BsmAI	GTCTC	1 cut(s)	477
BsmFI	GGGAC	1 cut(s)	1317
BsnI	GGCC	3 cut(s)	397, 1334, 1418
BsoBI	CYCGRG	1 cut(s)	744
Bsp119I	TTCGAA	1 cut(s)	886
Bsp1286I	GDGCHC	2 cut(s)	697, 772
Bsp143I	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
Bsp19I	CCATGG	1 cut(s)	1419
BspACI	CCGC	4 cut(s)	669, 677, 1000, 1326
BspANI	GGCC	3 cut(s)	397, 1334, 1418
BspCNI	CTCAG	3 cut(s)	164, 242, 1468
BspHI	TCATGA	1 cut(s)	775
BspLI	GGNNCC	5 cut(s)	59, 267, 865, 1324, 1395
BspMI	ACCTGC	1 cut(s)	1265
BspPI	GGATC	2 cut(s)	743, 1508
BspT104I	TTCGAA	1 cut(s)	886
BspT107I	GGYRCC	2 cut(s)	863, 1393
BspTI	CTTAAG	3 cut(s)	122, 343, 1183
BsrDI	GCAATG	4 cut(s)	430, 614, 672, 1075
BsrI	ACTGG	3 cut(s)	716, 829, 1310
BssECI	CCNNGG	6 cut(s)	867, 1053, 1329, 1335, 1377, 1419
BssMI	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
BssT1I	CCWWGG	5 cut(s)	867, 1053, 1329, 1335, 1419
Bst2UI	CCWGG	2 cut(s)	537, 648
Bst4CI	ACNGT	1 cut(s)	1015
BstAFI	CTTAAG	3 cut(s)	122, 343, 1183
BstAPI	GCANNNNNTGC	2 cut(s)	692, 1008
BstBAI	YACGTR	1 cut(s)	1271
BstBI	TTCGAA	1 cut(s)	886
BstC8I	GCNNGC	1 cut(s)	73
BstDEI	CTNAG	9 cut(s)	151, 210, 229, 386, 511, 1211, 1455, 1464, 1487
BstDSI	CCRYGG	1 cut(s)	1419
BstEII	GGTNACC	1 cut(s)	580
BstF5I	GGATG	2 cut(s)	1304, 1387
BstHHI	GCGC	1 cut(s)	621
BstKTI	GATC	9 cut(s)	109, 244, 751, 799, 851, 1190, 1201, 1493, 1503
BstMAI	GTCTC	1 cut(s)	477
BstMBI	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
BstMWI	GCNNNNNNNGC	4 cut(s)	683, 692, 1008, 1325
BstNI	CCWGG	2 cut(s)	537, 648
BstNSI	RCATGY	4 cut(s)	75, 597, 701, 768
BstPI	GGTNACC	1 cut(s)	580
BstSCI	CCNGG	2 cut(s)	535, 646
BstSLI	GKGCMC	1 cut(s)	697
BstV1I	GCAGC	2 cut(s)	187, 555
BstV2I	GAAGAC	2 cut(s)	792, 1040
BstX2I	RGATCY	2 cut(s)	748, 1198
BstXI	CCANNNNNNTGG	1 cut(s)	1336
BstYI	RGATCY	2 cut(s)	748, 1198
Bsu36I	CCTNAGG	1 cut(s)	210
BsuI	GTATCC	1 cut(s)	1052
BsuRI	GGCC	3 cut(s)	397, 1334, 1418
BtgI	CCRYGG	1 cut(s)	1419
BtrI	CACGTC	1 cut(s)	790
BtsCI	GGATG	2 cut(s)	1304, 1387
BtsIMutI	CAGTG	3 cut(s)	723, 1011, 1197
BveI	ACCTGC	1 cut(s)	1265
Cac8I	GCNNGC	1 cut(s)	73
CaiI	CAGNNNCTG	1 cut(s)	542
CciI	TCATGA	1 cut(s)	775
CfoI	GCGC	1 cut(s)	621
Cfr13I	GGNCC	2 cut(s)	395, 1322
Csp6I	GTAC	4 cut(s)	155, 1043, 1208, 1394
CviQI	GTAC	4 cut(s)	155, 1043, 1208, 1394
DdeI	CTNAG	9 cut(s)	151, 210, 229, 386, 511, 1211, 1455, 1464, 1487
DpnI	GATC	9 cut(s)	108, 243, 750, 798, 850, 1189, 1200, 1492, 1502
DpnII	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
EaeI	YGGCCR	1 cut(s)	1416
Eco130I	CCWWGG	5 cut(s)	867, 1053, 1329, 1335, 1419
Eco147I	AGGCCT	1 cut(s)	1334
Eco47I	GGWCC	1 cut(s)	1322
Eco57I	CTGAAG	1 cut(s)	143
Eco72I	CACGTG	1 cut(s)	1271
Eco81I	CCTNAGG	1 cut(s)	210
Eco88I	CYCGRG	1 cut(s)	744
Eco91I	GGTNACC	1 cut(s)	580
EcoO109I	RGGNCCY	1 cut(s)	395
EcoO65I	GGTNACC	1 cut(s)	580
EcoRI	GAATTC	1 cut(s)	518
EcoRII	CCWGG	2 cut(s)	535, 646
EcoT14I	CCWWGG	5 cut(s)	867, 1053, 1329, 1335, 1419
EcoT22I	ATGCAT	2 cut(s)	77, 1075
ErhI	CCWWGG	5 cut(s)	867, 1053, 1329, 1335, 1419
FaqI	GGGAC	1 cut(s)	1317
FauI	CCCGC	1 cut(s)	1333
FbaI	TGATCA	1 cut(s)	796
Fnu4HI	GCNGC	2 cut(s)	176, 569
FokI	GGATG	2 cut(s)	1311, 1394
Fsp4HI	GCNGC	2 cut(s)	176, 569
FspBI	CTAG	4 cut(s)	479, 822, 1442, 1497
GlaI	GCGC	1 cut(s)	620
GluI	GCNGC	2 cut(s)	176, 569
HaeIII	GGCC	3 cut(s)	397, 1334, 1418
HapII	CCGG	2 cut(s)	179, 194
HhaI	GCGC	1 cut(s)	621
Hin6I	GCGC	1 cut(s)	619
HinP1I	GCGC	1 cut(s)	619
HinfI	GANTC	4 cut(s)	15, 51, 809, 895
HpaII	CCGG	2 cut(s)	179, 194
HphI	GGTGA	6 cut(s)	44, 175, 340, 440, 592, 1159
Hpy166II	GTNNAC	2 cut(s)	506, 695
Hpy188I	TCNGA	3 cut(s)	232, 544, 1261
Hpy188III	TCNNGA	6 cut(s)	55, 245, 664, 746, 776, 1457
Hpy8I	GTNNAC	2 cut(s)	506, 695
Hpy99I	CGWCG	1 cut(s)	449
HpyAV	CCTTC	6 cut(s)	242, 306, 375, 386, 425, 1147
HpyCH4III	ACNGT	1 cut(s)	1015
HpyCH4IV	ACGT	4 cut(s)	789, 1045, 1270, 1356
HpyF10VI	GCNNNNNNNGC	4 cut(s)	683, 692, 1008, 1325
HpyF3I	CTNAG	9 cut(s)	151, 210, 229, 386, 511, 1211, 1455, 1464, 1487
HpySE526I	ACGT	4 cut(s)	789, 1045, 1270, 1356
HspAI	GCGC	1 cut(s)	619
KpnI	GGTACC	1 cut(s)	1397
Ksp22I	TGATCA	1 cut(s)	796
Kzo9I	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
LmnI	GCTCC	1 cut(s)	926
Lsp1109I	GCAGC	2 cut(s)	187, 555
LweI	GCATC	2 cut(s)	132, 631
MaeI	CTAG	4 cut(s)	479, 822, 1442, 1497
MaeII	ACGT	4 cut(s)	789, 1045, 1270, 1356
MaeIII	GTNAC	6 cut(s)	281, 463, 580, 824, 937, 1478
MalI	GATC	9 cut(s)	108, 243, 750, 798, 850, 1189, 1200, 1492, 1502
MboI	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
MboII	GAAGA	6 cut(s)	60, 797, 875, 1040, 1162, 1187
MflI	RGATCY	2 cut(s)	748, 1198
MhlI	GDGCHC	2 cut(s)	697, 772
MlyI	GAGTC	1 cut(s)	803
MmeI	TCCRAC	1 cut(s)	1109
Mph1103I	ATGCAT	2 cut(s)	77, 1075
MseI	TTAA	9 cut(s)	123, 132, 303, 324, 344, 528, 975, 981, 1184
MslI	CAYNNNNRTG	2 cut(s)	780, 804
MspCI	CTTAAG	3 cut(s)	122, 343, 1183
MspI	CCGG	2 cut(s)	179, 194
MspR9I	CCNGG	2 cut(s)	537, 648
MvaI	CCWGG	2 cut(s)	537, 648
MwoI	GCNNNNNNNGC	4 cut(s)	683, 692, 1008, 1325
NcoI	CCATGG	1 cut(s)	1419
NdeII	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
NlaIV	GGNNCC	5 cut(s)	59, 267, 865, 1324, 1395
NmeAIII	GCCGAG	1 cut(s)	1394
NmuCI	GTSAC	3 cut(s)	463, 580, 937
NsiI	ATGCAT	2 cut(s)	77, 1075
NspI	RCATGY	4 cut(s)	75, 597, 701, 768
NspV	TTCGAA	1 cut(s)	886
PaeI	GCATGC	1 cut(s)	75
PaeR7I	CTCGAG	1 cut(s)	744
PagI	TCATGA	1 cut(s)	775
PceI	AGGCCT	1 cut(s)	1334
PciI	ACATGT	2 cut(s)	593, 764
PfeI	GAWTC	3 cut(s)	15, 51, 895
PflFI	GACNNNGTC	1 cut(s)	935
PkrI	GCNGC	2 cut(s)	177, 570
PleI	GAGTC	1 cut(s)	803
PmaCI	CACGTG	1 cut(s)	1271
PmlI	CACGTG	1 cut(s)	1271
PpsI	GAGTC	1 cut(s)	803
Ppu21I	YACGTR	1 cut(s)	1271
PscI	ACATGT	2 cut(s)	593, 764
PshBI	ATTAAT	1 cut(s)	981
PsiI	TTATAA	2 cut(s)	188, 275
Psp6I	CCWGG	2 cut(s)	535, 646
PspCI	CACGTG	1 cut(s)	1271
PspEI	GGTNACC	1 cut(s)	580
PspGI	CCWGG	2 cut(s)	535, 646
PspN4I	GGNNCC	5 cut(s)	59, 267, 865, 1324, 1395
PspPI	GGNCC	2 cut(s)	395, 1322
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	2 cut(s)	748, 1198
PsyI	GACNNNGTC	1 cut(s)	935
RsaI	GTAC	4 cut(s)	156, 1044, 1209, 1395
RsaNI	GTAC	4 cut(s)	155, 1043, 1208, 1394
RseI	CAYNNNNRTG	2 cut(s)	780, 804
SaqAI	TTAA	9 cut(s)	123, 132, 303, 324, 344, 528, 975, 981, 1184
SatI	GCNGC	2 cut(s)	176, 569
Sau3AI	GATC	9 cut(s)	106, 241, 748, 796, 848, 1187, 1198, 1490, 1500
Sau96I	GGNCC	2 cut(s)	395, 1322
ScaI	AGTACT	1 cut(s)	156
SchI	GAGTC	1 cut(s)	803
ScrFI	CCNGG	2 cut(s)	537, 648
SduI	GDGCHC	2 cut(s)	697, 772
SfaNI	GCATC	2 cut(s)	132, 631
Sfr274I	CTCGAG	1 cut(s)	744
SfuI	TTCGAA	1 cut(s)	886
SinI	GGWCC	1 cut(s)	1322
SlaI	CTCGAG	1 cut(s)	744
SmiMI	CAYNNNNRTG	2 cut(s)	780, 804
SmlI	CTYRAG	6 cut(s)	122, 253, 343, 470, 744, 1183
SmoI	CTYRAG	6 cut(s)	122, 253, 343, 470, 744, 1183
SphI	GCATGC	1 cut(s)	75
SseBI	AGGCCT	1 cut(s)	1334
SsiI	CCGC	4 cut(s)	669, 677, 1000, 1326
SspI	AATATT	2 cut(s)	1229, 1389
SspMI	CTAG	4 cut(s)	479, 822, 1442, 1497
StuI	AGGCCT	1 cut(s)	1334
StyD4I	CCNGG	2 cut(s)	535, 646
StyI	CCWWGG	5 cut(s)	867, 1053, 1329, 1335, 1419
TaaI	ACNGT	1 cut(s)	1015
TaiI	ACGT	4 cut(s)	792, 1048, 1273, 1359
TaqI	TCGA	5 cut(s)	417, 447, 745, 886, 1235
TatI	WGTACW	1 cut(s)	154
TfiI	GAWTC	3 cut(s)	15, 51, 895
Tru1I	TTAA	9 cut(s)	123, 132, 303, 324, 344, 528, 975, 981, 1184
Tru9I	TTAA	9 cut(s)	123, 132, 303, 324, 344, 528, 975, 981, 1184
TscAI	CASTG	3 cut(s)	723, 1018, 1197
TseFI	GTSAC	3 cut(s)	463, 580, 937
TseI	GCWGC	2 cut(s)	175, 568
Tsp45I	GTSAC	3 cut(s)	463, 580, 937
TspDTI	ATGAA	8 cut(s)	150, 595, 792, 798, 996, 1184, 1188, 1221
TspGWI	ACGGA	1 cut(s)	60
TspRI	CASTG	3 cut(s)	723, 1018, 1197
Tth111I	GACNNNGTC	1 cut(s)	935
Vha464I	CTTAAG	3 cut(s)	122, 343, 1183
VneI	GTGCAC	1 cut(s)	693
VpaK11BI	GGWCC	1 cut(s)	1322
VspI	ATTAAT	1 cut(s)	981
XapI	RAATTY	2 cut(s)	489, 518
XceI	RCATGY	4 cut(s)	75, 597, 701, 768
XcmI	CCANNNNNNNNNTGG	2 cut(s)	679, 931
XhoI	CTCGAG	1 cut(s)	744
XspI	CTAG	4 cut(s)	479, 822, 1442, 1497
ZrmI	AGTACT	1 cut(s)	156
Zsp2I	ATGCAT	2 cut(s)	77, 1075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.