Rroxscaffold_3G00245400

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000190
Physical Location & Seq
Forward (+)
38354733 .. 38358115
3383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00245400.1

Sequence Viewer

Length: 1608 bp
ATGGCGTTGCCACGCTCCTTAGTATTTCAGGTTAATCGAACCCAGCCACAACTTATAACTCCGGCAAGGCCAACTCCTCGTGAAACAAAGATGCTGTCAGATATAGATGACCAGCAAGGCCTTAGGTTTCAGGTACCAGTCATCGCAGCCTTCAAGAACAATCCTTCAATGTCGAACCGAACAGACCCTGTTCAGGTGATTAGGGAAGCAATAAGTAGAGCATTGGTGTATTACTACCCTTTGGCAGGTAGGCTCAGGGAAGGGCCTAACAGAAAGCTTATGGTGGATTGCAACGGAGAAGGTGTCTTGTTCGTTGGGGCTAATGCTGACGTCACTCTCGAGGAAATTGGAGATGCTATTCTACCCCCTTGCCCTGTGTTAGAGGACTTCCTATGTAATGTCCCGGGCTCGGATGGCATTCTTGGTTGCCCTTTGTTGTTAGTTCAGGTGACCATTTTGGGATGCGGAGGTTTCATACTTGCATTGCGCGTGAACCACACAATGTGTGATGCGCCTGGATTGGTCCTGTTCTTGAACACGGTAGGGGAGATGGTTCAAGGAAAAAGTGCACCATCTATTCCACCAGTGTGGGAGCGAGAGATCTTGAATGCCCGAGATCCACCACGAATTACATGTATACATCACGAATACGAGGAAATTATTGATGACTACTCAGATGAGGGCTCTGATGCGGCAGTAATGGTGCAAAAATCTGTCTACTTTGGTCCCAATGAGATAAGGGCCCTGAAGAAACATCTTCCACAGCACCTTTCCAATTGCTCTACATTCGACCTCATAACATCCTGTTTGTGGAAGTGCCGCACAGTTGCACTAGAACTTAATCCGGAACAGGTTGTTCGGGTTTCATGCCTAGTCAATGCACGTGGGAAGCACAACAGTCTACGTCTTCCTTTGGGTTACTACGGCAATGCATTTGCATACCCAGCTGCTGTTTCGGGAGTGAAACAATTGTGTGAAAGTTCGTTGGGATATGCACTGGAGTTGGTGATGAAGGCAAAATATGAAATGAATGAAGAGTACATGAGATCAGTGGCAGATCTTATGGTCATAAGAGGACGGCCTCCATTTACATTGACCGGGAACTTCATAGTTTCAGATAATCGACGTACTCGCCTTGGAGATGTCAACTTGGGGTGGGGAAAGCCAGCATTTTCTGGACCTGCCAAGGCCTTGAACCTTATTAGTTTCTATGTTCAGCAAAAAAAGGAAAAAGAGGATGGGATTTTGGTGCCAGTGTGCTTGCCATCGTTGAGTATGGTGAGATTTCAGCAGGAACTCGAGAAGATGACGTCGTCGGAGATGGTGGAAAATATAAATAACACTAAATCTGCTAATACTAATGTTATTTTCTCTCCCACTGTAGCCACTTCGCCACCTTCGTTCTTCCTCCTCCGGTCACCGTTTGCTTCGATTCCAAAGGGAATCCCCGCTCTCTCGTCCCTCTACTCGTCCGTGGTGGTGATTCGTTGTGGGAAGCACCGTAGACGACGCTACAAGGCCGAGAAGTTGCACGGTGGAGCCGAAAATCACCCAAATTCGCCGACCTTGGTTCTCCCAACTCCGGCCACCATAGCTCGAGTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

535

Amino Acids

59.03

Weight (kDa)

8.66

Isoelectric Point (pI)

48.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 10 - 436 4.5e-77 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 56
AatII GACGTC 2 cut(s) 333, 1313
Acc36I ACCTGC 2 cut(s) 236, 1189
Acc65I GGTACC 1 cut(s) 133
AccB1I GGYRCC 2 cut(s) 133, 1249
AccBSI CCGCTC 1 cut(s) 1451
AccI GTMKAC 4 cut(s) 637, 717, 901, 1504
AccII CGCG 1 cut(s) 489
AccIII TCCGGA 1 cut(s) 844
AciI CCGC 4 cut(s) 465, 692, 820, 1449
AclWI GGATC 1 cut(s) 611
AcoI YGGCCR 1 cut(s) 1584
AcsI RAATTY 1 cut(s) 1555
AcuI CTGAAG 1 cut(s) 767
AcvI CACGTG 1 cut(s) 884
AcyI GRCGYC 2 cut(s) 330, 1310
AdeI CACNNNGTG 1 cut(s) 504
AfaI GTAC 3 cut(s) 135, 1040, 1129
AfiI CCNNNNNNNGG 5 cut(s) 193, 245, 409, 810, 1582
AflIII ACRYGT 1 cut(s) 632
AgsI TTSAA 6 cut(s) 154, 168, 535, 557, 607, 1195
AjnI CCWGG 1 cut(s) 514
AleI CACNNNNGTG 1 cut(s) 586
AluBI AGCT 3 cut(s) 277, 947, 1595
AluI AGCT 3 cut(s) 277, 947, 1595
Alw21I GWGCWC 1 cut(s) 571
Alw44I GTGCAC 1 cut(s) 567
AlwI GGATC 1 cut(s) 611
AlwNI CAGNNNCTG 2 cut(s) 188, 950
Ama87I CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
Aor13HI TCCGGA 1 cut(s) 844
AoxI GGCC 8 cut(s) 68, 118, 263, 741, 1079, 1188, 1518, 1584
ApaI GGGCCC 1 cut(s) 745
ApaLI GTGCAC 1 cut(s) 567
ApeKI GCWGC 2 cut(s) 146, 947
ApoI RAATTY 1 cut(s) 1555
ArsI GACNNNNNNTTYG 2 cut(s) 80, 112
Asp718I GGTACC 1 cut(s) 133
AspLEI GCGC 2 cut(s) 489, 514
AspS9I GGNCC 6 cut(s) 263, 523, 725, 741, 742, 1178
AsuC2I CCSGG 3 cut(s) 404, 405, 1099
AsuHPI GGTGA 7 cut(s) 208, 460, 1018, 1291, 1410, 1492, 1541
AvaI CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
AvaII GGWCC 3 cut(s) 523, 725, 1178
AxyI CCTNAGG 1 cut(s) 122
BaeGI GKGCMC 2 cut(s) 571, 745
BanI GGYRCC 2 cut(s) 133, 1249
BanII GRGCYC 3 cut(s) 410, 686, 745
BauI CACGAG 1 cut(s) 78
BbrPI CACGTG 1 cut(s) 884
BbsI GAAGAC 1 cut(s) 899
Bbv12I GWGCWC 1 cut(s) 571
BbvI GCAGC 2 cut(s) 158, 934
BccI CCATC 6 cut(s) 407, 544, 580, 1232, 1273, 1315
BceAI ACGGC 2 cut(s) 940, 1094
BciT130I CCWGG 1 cut(s) 516
BcnI CCSGG 3 cut(s) 404, 405, 1099
BfaI CTAG 2 cut(s) 833, 872
BfmI CTRYAG 1 cut(s) 1380
BfuAI ACCTGC 2 cut(s) 236, 1189
BglII AGATCT 2 cut(s) 600, 1057
BisI GCNGC 4 cut(s) 147, 693, 820, 948
BlsI GCNGC 4 cut(s) 148, 694, 821, 949
Bme1390I CCNGG 4 cut(s) 404, 405, 516, 1099
Bme18I GGWCC 3 cut(s) 523, 725, 1178
BmeT110I CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
BmgT120I GGNCC 6 cut(s) 263, 523, 725, 741, 742, 1178
BmiI GGNNCC 5 cut(s) 135, 727, 743, 1251, 1540
BmrFI CCNGG 4 cut(s) 404, 405, 516, 1099
BmsI GCATC 5 cut(s) 81, 343, 452, 499, 679
BpiI GAAGAC 1 cut(s) 899
BpmI CTGGAG 1 cut(s) 1019
Bpu10I CCTNAGC 1 cut(s) 254
BpuMI CCSGG 3 cut(s) 404, 405, 1099
BsaAI YACGTR 1 cut(s) 884
BsaHI GRCGYC 2 cut(s) 330, 1310
BsaJI CCNNGG 5 cut(s) 403, 1135, 1185, 1473, 1566
BsaWI WCCGGW 2 cut(s) 844, 1413
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 245, 409, 810, 1582
Bse1I ACTGG 4 cut(s) 137, 584, 1002, 1253
Bse21I CCTNAGG 1 cut(s) 122
Bse3DI GCAATG 2 cut(s) 482, 934
BseAI TCCGGA 1 cut(s) 844
BseBI CCWGG 1 cut(s) 516
BseDI CCNNGG 5 cut(s) 403, 1135, 1185, 1473, 1566
BseGI GGATG 4 cut(s) 418, 467, 800, 1243
BseLI CCNNNNNNNGG 5 cut(s) 193, 245, 409, 810, 1582
BseMI GCAATG 2 cut(s) 482, 934
BseMII CTCAG 2 cut(s) 268, 687
BseNI ACTGG 4 cut(s) 137, 584, 1002, 1253
BseRI GAGGAG 2 cut(s) 66, 1400
BseSI GKGCMC 2 cut(s) 571, 745
BseXI GCAGC 2 cut(s) 158, 934
BseYI CCCAGC 2 cut(s) 42, 943
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 8 cut(s) 70, 120, 265, 743, 1081, 1190, 1520, 1586
BshNI GGYRCC 2 cut(s) 133, 1249
BsiHKAI GWGCWC 1 cut(s) 571
BsiHKCI CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
BsiSI CCGG 6 cut(s) 62, 404, 845, 1098, 1414, 1583
BslFI GGGAC 3 cut(s) 386, 711, 1444
BslI CCNNNNNNNGG 5 cut(s) 193, 245, 409, 810, 1582
BsmFI GGGAC 3 cut(s) 386, 711, 1444
BsmI GAATGC 2 cut(s) 417, 613
BsnI GGCC 8 cut(s) 70, 120, 265, 743, 1081, 1190, 1520, 1586
BsoBI CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
Bsp120I GGGCCC 1 cut(s) 741
Bsp1286I GDGCHC 4 cut(s) 410, 571, 686, 745
Bsp13I TCCGGA 1 cut(s) 844
Bsp143I GATC 4 cut(s) 600, 616, 1046, 1057
BspACI CCGC 4 cut(s) 465, 692, 820, 1449
BspANI GGCC 8 cut(s) 70, 120, 265, 743, 1081, 1190, 1520, 1586
BspCNI CTCAG 2 cut(s) 267, 686
BspEI TCCGGA 1 cut(s) 844
BspFNI CGCG 1 cut(s) 489
BspLI GGNNCC 5 cut(s) 135, 727, 743, 1251, 1540
BspMI ACCTGC 2 cut(s) 236, 1189
BspPI GGATC 1 cut(s) 611
BspT107I GGYRCC 2 cut(s) 133, 1249
BsrBI CCGCTC 1 cut(s) 1451
BsrDI GCAATG 2 cut(s) 482, 934
BsrI ACTGG 4 cut(s) 137, 584, 1002, 1253
BssECI CCNNGG 5 cut(s) 403, 1135, 1185, 1473, 1566
BssMI GATC 4 cut(s) 600, 616, 1046, 1057
BssNAI GTATAC 1 cut(s) 638
BssNI GRCGYC 2 cut(s) 330, 1310
BssSI CACGAG 1 cut(s) 78
BssT1I CCWWGG 3 cut(s) 1135, 1185, 1566
Bst1107I GTATAC 1 cut(s) 638
Bst2BI CACGAG 1 cut(s) 78
Bst2UI CCWGG 1 cut(s) 516
Bst4CI ACNGT 7 cut(s) 541, 826, 899, 1381, 1422, 1502, 1535
Bst6I CTCTTC 1 cut(s) 1029
BstACI GRCGYC 2 cut(s) 330, 1310
BstBAI YACGTR 1 cut(s) 884
BstC8I GCNNGC 2 cut(s) 1167, 1262
BstDEI CTNAG 4 cut(s) 19, 122, 254, 673
BstDSI CCRYGG 1 cut(s) 1473
BstEII GGTNACC 2 cut(s) 448, 1416
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 4 cut(s) 418, 467, 800, 1243
BstFNI CGCG 1 cut(s) 489
BstHHI GCGC 2 cut(s) 489, 514
BstKTI GATC 4 cut(s) 603, 619, 1049, 1060
BstMBI GATC 4 cut(s) 600, 616, 1046, 1057
BstMWI GCNNNNNNNGC 3 cut(s) 414, 944, 1592
BstNI CCWGG 1 cut(s) 516
BstNSI RCATGY 1 cut(s) 636
BstPI GGTNACC 2 cut(s) 448, 1416
BstSCI CCNGG 4 cut(s) 402, 403, 514, 1097
BstSFI CTRYAG 1 cut(s) 1380
BstSLI GKGCMC 2 cut(s) 571, 745
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 2 cut(s) 158, 934
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 3 cut(s) 600, 616, 1057
BstXI CCANNNNNNTGG 1 cut(s) 588
BstYI RGATCY 3 cut(s) 600, 616, 1057
BstZ17I GTATAC 1 cut(s) 638
Bsu36I CCTNAGG 1 cut(s) 122
BsuRI GGCC 8 cut(s) 70, 120, 265, 743, 1081, 1190, 1520, 1586
BtgI CCRYGG 1 cut(s) 1473
BtgZI GCGATG 1 cut(s) 127
BtsCI GGATG 4 cut(s) 418, 467, 800, 1243
BtsIMutI CAGTG 5 cut(s) 591, 995, 1056, 1260, 1377
BveI ACCTGC 2 cut(s) 236, 1189
Cac8I GCNNGC 2 cut(s) 1167, 1262
CaiI CAGNNNCTG 2 cut(s) 188, 950
CfoI GCGC 2 cut(s) 489, 514
Cfr13I GGNCC 6 cut(s) 263, 523, 725, 741, 742, 1178
Cfr9I CCCGGG 1 cut(s) 403
CseI GACGC 1 cut(s) 1518
Csp6I GTAC 3 cut(s) 134, 1039, 1128
CspCI CAANNNNNGTGG 2 cut(s) 865, 900
CviAII CATG 3 cut(s) 633, 867, 1042
CviQI GTAC 3 cut(s) 134, 1039, 1128
DdeI CTNAG 4 cut(s) 19, 122, 254, 673
DpnI GATC 4 cut(s) 602, 618, 1048, 1059
DpnII GATC 4 cut(s) 600, 616, 1046, 1057
DraIII CACNNNGTG 1 cut(s) 504
EaeI YGGCCR 1 cut(s) 1584
Eam1104I CTCTTC 1 cut(s) 1029
EarI CTCTTC 1 cut(s) 1029
Eco130I CCWWGG 3 cut(s) 1135, 1185, 1566
Eco147I AGGCCT 2 cut(s) 120, 1190
Eco24I GRGCYC 3 cut(s) 410, 686, 745
Eco47I GGWCC 3 cut(s) 523, 725, 1178
Eco57I CTGAAG 1 cut(s) 767
Eco72I CACGTG 1 cut(s) 884
Eco81I CCTNAGG 1 cut(s) 122
Eco88I CYCGRG 5 cut(s) 338, 403, 612, 1298, 1596
Eco91I GGTNACC 2 cut(s) 448, 1416
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoO109I RGGNCCY 3 cut(s) 263, 741, 742
EcoO65I GGTNACC 2 cut(s) 448, 1416
EcoRII CCWGG 1 cut(s) 514
EcoT14I CCWWGG 3 cut(s) 1135, 1185, 1566
EcoT22I ATGCAT 1 cut(s) 934
EcoT38I GRGCYC 3 cut(s) 410, 686, 745
ErhI CCWWGG 3 cut(s) 1135, 1185, 1566
FaeI CATG 3 cut(s) 636, 870, 1045
FaqI GGGAC 3 cut(s) 386, 711, 1444
FatI CATG 3 cut(s) 632, 866, 1041
FauI CCCGC 1 cut(s) 1456
FblI GTMKAC 4 cut(s) 637, 717, 901, 1504
Fnu4HI GCNGC 4 cut(s) 147, 693, 820, 948
FokI GGATG 4 cut(s) 425, 474, 787, 1250
FriOI GRGCYC 3 cut(s) 410, 686, 745
Fsp4HI GCNGC 4 cut(s) 147, 693, 820, 948
FspBI CTAG 2 cut(s) 833, 872
GlaI GCGC 2 cut(s) 488, 513
GluI GCNGC 4 cut(s) 147, 693, 820, 948
GsaI CCCAGC 2 cut(s) 46, 947
GsuI CTGGAG 1 cut(s) 1019
HaeIII GGCC 8 cut(s) 70, 120, 265, 743, 1081, 1190, 1520, 1586
HapII CCGG 6 cut(s) 62, 404, 845, 1098, 1414, 1583
HgaI GACGC 1 cut(s) 1518
HhaI GCGC 2 cut(s) 489, 514
Hin1I GRCGYC 2 cut(s) 330, 1310
Hin1II CATG 3 cut(s) 636, 870, 1045
Hin6I GCGC 2 cut(s) 487, 512
HinP1I GCGC 2 cut(s) 487, 512
HincII GTYRAC 1 cut(s) 1147
HindII GTYRAC 1 cut(s) 1147
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 3 cut(s) 1432, 1443, 1483
HpaII CCGG 6 cut(s) 62, 404, 845, 1098, 1414, 1583
HphI GGTGA 7 cut(s) 208, 460, 1018, 1291, 1410, 1492, 1541
Hpy166II GTNNAC 7 cut(s) 493, 569, 638, 718, 902, 1147, 1505
Hpy188I TCNGA 6 cut(s) 100, 412, 676, 688, 1117, 1318
Hpy8I GTNNAC 7 cut(s) 493, 569, 638, 718, 902, 1147, 1505
Hpy99I CGWCG 4 cut(s) 1128, 1315, 1318, 1512
HpyAV CCTTC 6 cut(s) 160, 174, 254, 293, 1006, 1407
HpyCH4III ACNGT 7 cut(s) 541, 826, 899, 1381, 1422, 1502, 1535
HpyCH4IV ACGT 5 cut(s) 330, 883, 904, 1126, 1310
HpyF10VI GCNNNNNNNGC 3 cut(s) 414, 944, 1592
HpyF3I CTNAG 4 cut(s) 19, 122, 254, 673
HpySE526I ACGT 5 cut(s) 330, 883, 904, 1126, 1310
Hsp92I GRCGYC 2 cut(s) 330, 1310
Hsp92II CATG 3 cut(s) 636, 870, 1045
HspAI GCGC 2 cut(s) 487, 512
Kpn2I TCCGGA 1 cut(s) 844
KpnI GGTACC 1 cut(s) 137
Kzo9I GATC 4 cut(s) 600, 616, 1046, 1057
LmnI GCTCC 3 cut(s) 20, 592, 1538
Lsp1109I GCAGC 2 cut(s) 158, 934
LweI GCATC 5 cut(s) 81, 343, 452, 499, 679
MaeI CTAG 2 cut(s) 833, 872
MaeII ACGT 5 cut(s) 330, 883, 904, 1126, 1310
MaeIII GTNAC 4 cut(s) 331, 448, 917, 1416
MalI GATC 4 cut(s) 602, 618, 1048, 1059
MbiI CCGCTC 1 cut(s) 1451
MboI GATC 4 cut(s) 600, 616, 1046, 1057
MboII GAAGA 6 cut(s) 749, 760, 899, 1046, 1315, 1396
MfeI CAATTG 2 cut(s) 775, 968
MflI RGATCY 3 cut(s) 600, 616, 1057
MhlI GDGCHC 4 cut(s) 410, 571, 686, 745
MluCI AATT 6 cut(s) 345, 627, 657, 775, 968, 1555
MmeI TCCRAC 1 cut(s) 1296
Mph1103I ATGCAT 1 cut(s) 934
MroI TCCGGA 1 cut(s) 844
MseI TTAA 2 cut(s) 33, 840
MslI CAYNNNNRTG 1 cut(s) 586
MspA1I CMGCKG 1 cut(s) 947
MspI CCGG 6 cut(s) 62, 404, 845, 1098, 1414, 1583
MspR9I CCNGG 4 cut(s) 404, 405, 516, 1099
MunI CAATTG 2 cut(s) 775, 968
Mva1269I GAATGC 2 cut(s) 417, 613
MvaI CCWGG 1 cut(s) 516
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 3 cut(s) 414, 944, 1592
NciI CCSGG 3 cut(s) 404, 405, 1099
NdeII GATC 4 cut(s) 600, 616, 1046, 1057
NlaIII CATG 3 cut(s) 636, 870, 1045
NlaIV GGNNCC 5 cut(s) 135, 727, 743, 1251, 1540
NmeAIII GCCGAG 1 cut(s) 1546
NmuCI GTSAC 3 cut(s) 331, 448, 1416
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 1 cut(s) 636
OliI CACNNNNGTG 1 cut(s) 586
PaeR7I CTCGAG 3 cut(s) 338, 1298, 1596
PceI AGGCCT 2 cut(s) 120, 1190
PciI ACATGT 1 cut(s) 632
PcsI WCGNNNNNNNCGW 3 cut(s) 336, 1397, 1539
PctI GAATGC 2 cut(s) 417, 613
PfeI GAWTC 3 cut(s) 1432, 1443, 1483
PflFI GACNNNGTC 1 cut(s) 1312
PkrI GCNGC 4 cut(s) 148, 694, 821, 949
PmaCI CACGTG 1 cut(s) 884
PmlI CACGTG 1 cut(s) 884
Ppu21I YACGTR 1 cut(s) 884
PscI ACATGT 1 cut(s) 632
PsiI TTATAA 1 cut(s) 56
Psp6I CCWGG 1 cut(s) 514
PspCI CACGTG 1 cut(s) 884
PspEI GGTNACC 2 cut(s) 448, 1416
PspFI CCCAGC 2 cut(s) 42, 943
PspGI CCWGG 1 cut(s) 514
PspN4I GGNNCC 5 cut(s) 135, 727, 743, 1251, 1540
PspOMI GGGCCC 1 cut(s) 741
PspPI GGNCC 6 cut(s) 263, 523, 725, 741, 742, 1178
PspXI VCTCGAGB 1 cut(s) 1596
PstNI CAGNNNCTG 2 cut(s) 188, 950
PsuI RGATCY 3 cut(s) 600, 616, 1057
PsyI GACNNNGTC 1 cut(s) 1312
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 3 cut(s) 135, 1040, 1129
RsaNI GTAC 3 cut(s) 134, 1039, 1128
RseI CAYNNNNRTG 1 cut(s) 586
SaqAI TTAA 2 cut(s) 33, 840
SatI GCNGC 4 cut(s) 147, 693, 820, 948
Sau3AI GATC 4 cut(s) 600, 616, 1046, 1057
Sau96I GGNCC 6 cut(s) 263, 523, 725, 741, 742, 1178
ScrFI CCNGG 4 cut(s) 404, 405, 516, 1099
SduI GDGCHC 4 cut(s) 410, 571, 686, 745
SfaNI GCATC 5 cut(s) 81, 343, 452, 499, 679
SfcI CTRYAG 1 cut(s) 1380
Sfr274I CTCGAG 3 cut(s) 338, 1298, 1596
SinI GGWCC 3 cut(s) 523, 725, 1178
SlaI CTCGAG 3 cut(s) 338, 1298, 1596
SmaI CCCGGG 1 cut(s) 405
SmiMI CAYNNNNRTG 1 cut(s) 586
SmlI CTYRAG 3 cut(s) 338, 1298, 1596
SmoI CTYRAG 3 cut(s) 338, 1298, 1596
Sse9I AATT 6 cut(s) 345, 627, 657, 775, 968, 1555
SseBI AGGCCT 2 cut(s) 120, 1190
SsiI CCGC 4 cut(s) 465, 692, 820, 1449
SspMI CTAG 2 cut(s) 833, 872
StuI AGGCCT 2 cut(s) 120, 1190
StyD4I CCNGG 4 cut(s) 402, 403, 514, 1097
StyI CCWWGG 3 cut(s) 1135, 1185, 1566
TaaI ACNGT 7 cut(s) 541, 826, 899, 1381, 1422, 1502, 1535
TaiI ACGT 5 cut(s) 333, 886, 907, 1129, 1313
TaqI TCGA 8 cut(s) 37, 173, 339, 789, 1123, 1299, 1430, 1597
TasI AATT 6 cut(s) 345, 627, 657, 775, 968, 1555
TatI WGTACW 1 cut(s) 1038
TauI GCSGC 2 cut(s) 695, 822
TfiI GAWTC 3 cut(s) 1432, 1443, 1483
Tru1I TTAA 2 cut(s) 33, 840
Tru9I TTAA 2 cut(s) 33, 840
TscAI CASTG 5 cut(s) 591, 1002, 1056, 1260, 1384
TseFI GTSAC 3 cut(s) 331, 448, 1416
TseI GCWGC 2 cut(s) 146, 947
Tsp45I GTSAC 3 cut(s) 331, 448, 1416
TspDTI ATGAA 7 cut(s) 463, 855, 1025, 1038, 1043, 1047, 1096
TspGWI ACGGA 2 cut(s) 309, 1462
TspMI CCCGGG 1 cut(s) 403
TspRI CASTG 5 cut(s) 591, 1002, 1056, 1260, 1384
Tth111I GACNNNGTC 1 cut(s) 1312
VneI GTGCAC 1 cut(s) 567
VpaK11BI GGWCC 3 cut(s) 523, 725, 1178
XagI CCTNNNNNAGG 1 cut(s) 243
XapI RAATTY 1 cut(s) 1555
XceI RCATGY 1 cut(s) 636
XhoI CTCGAG 3 cut(s) 338, 1298, 1596
XmaI CCCGGG 1 cut(s) 403
XmiI GTMKAC 4 cut(s) 637, 717, 901, 1504
XspI CTAG 2 cut(s) 833, 872
ZraI GACGTC 2 cut(s) 331, 1311
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.