MD02G1014800.v1.1

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000190
Physical Location & Seq
Reverse (-)
962399 .. 965134
2736 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1014800.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGATGCCACTCTCAGTACTTCAGGTAAAACGATTGCAATTGGAACTTATAACTCCGGCAAAGCCAACTCCTCAAGAAACAAAGTTTCTCTCAGATATTGACGACCAAGAAGGCTTGAGATTTCAGGTTCCAGTCATAATGTGTTACAAAGATAACCCTTCACTTAATAAAAATTGTAATCCCGTTAAGGTGATTAGGGAAGCCTTAAGTAGAGCATTAGTGTATTACTACCCTTTAGCTGGAAGGCTTAAGGAAGGGCCTAACAGAAAGCTCATGGTCGATTGCAACGGTGAAGGTATCTTGTTTGTTGAGGCTTCTGCTGATGTCACACTTGAGCAACTAGGAGACAAAATTCTACCCCCTTGTCCACTTTTAGAGGAGTTCTTATTTAATTTTCCAGGCTCTGATGGAATTATTGGTTGTCCTTTGCTGCTGGTTCAGGTGACCTGTCTTACATGCGGAGGTTTCATACTTGCATTGCGCGCAAACCACACAATGTGTGATGCACCTGGATTGCTCCTGTTCCTGACCGCCATTGCGGAGATGGCAAGAGGCGCACATGCACCATCTATTCTACCAGTGTGGGAGAGAGAGCTCTTGTTCGCTCGAGATCCACCAAGAATTACATGTGTTCATCATGAATATGAAGACGTGATTGATCATTCTAATGGCTCATACGCATCCAGTAACCAGTCAAACATGGTTCAACGATCTTTCTACTTTGGTGCCAAGGAGATGAGAGTCCTTCAAAAACATATTCCACCCCACGTAATTTCCACTTGCTCCACATTTGACTTGATCACAGCTTGTTTGTGGAAATGTCGCACTCTTGCACTTAAAATTAATCCAAAACAGGCTGTTCGAGTTTCATGCATTGTCAATGCACGGGGAAAGCACCACAATGTACGTCTTCCCTTGGGATACTATGGCAATGCATTTGCATTTCCAACTGCAGTTTCAAAGGCTGAACCTCTATGCAAAAATCCACTGGGATATGCTTTGGAGTTGGTGAAGAAGGCTAAAGCTACCATGAATGAAGAATACTTAAGATCAGTGGCAGATCTTATGGTACTAAGAGGGCGACCTCAATATTCATCGACAGGAAGTTATTTAATAGTTTCTGATAATACGCGTGCAGGTTTTGGAGATGTCAATTTTGGATGGGGACAGCCGGTATTTGCTGGACCCGCCAAGGCCTTGGATTTGATTAGCTTCTACGTTCAACACAAAAACAACACTGAGGATGGAATATTGGTACCAATGTGTTTGCCATCCTCGGCCATGGAGAGATTTCAGCAGGAACTAGAGAGGATTACTCAGGAACCTAAGGAGGATATATGTAACAACCTTAGATCAACTAGGATCATGTCAATGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

460

Amino Acids

51.18

Weight (kDa)

8.08

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 9 - 436 1.5e-81 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 50
Acc36I ACCTGC 1 cut(s) 1127
Acc65I GGTACC 1 cut(s) 1255
AccB1I GGYRCC 2 cut(s) 725, 1255
AccII CGCG 2 cut(s) 483, 1132
AciI CCGC 4 cut(s) 459, 531, 539, 1188
AclWI GGATC 2 cut(s) 605, 1370
AcoI YGGCCR 1 cut(s) 1278
AcsI RAATTY 1 cut(s) 351
AcuI CTGAAG 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 498
AfaI GTAC 4 cut(s) 18, 906, 1071, 1257
AfiI CCNNNNNNNGG 1 cut(s) 239
AflII CTTAAG 3 cut(s) 205, 248, 1045
AflIII ACRYGT 2 cut(s) 626, 1130
AgsI TTSAA 4 cut(s) 707, 749, 960, 1223
AjiI CACGTC 1 cut(s) 652
AjnI CCWGG 2 cut(s) 397, 508
AjuI GAANNNNNNNTTGG 2 cut(s) 940, 972
AluBI AGCT 6 cut(s) 239, 271, 595, 806, 1025, 1212
AluI AGCT 6 cut(s) 239, 271, 595, 806, 1025, 1212
Alw21I GWGCWC 1 cut(s) 597
Alw26I GTCTC 1 cut(s) 339
AlwI GGATC 2 cut(s) 605, 1370
AlwNI CAGNNNCTG 1 cut(s) 404
Ama87I CYCGRG 1 cut(s) 606
AoxI GGCC 3 cut(s) 257, 1194, 1278
ApeKI GCWGC 1 cut(s) 430
ApoI RAATTY 1 cut(s) 351
AseI ATTAAT 1 cut(s) 843
Asp718I GGTACC 1 cut(s) 1255
AspLEI GCGC 3 cut(s) 483, 485, 557
AspS9I GGNCC 2 cut(s) 257, 1184
AsuHPI GGTGA 4 cut(s) 202, 302, 454, 1021
AvaI CYCGRG 1 cut(s) 606
AvaII GGWCC 1 cut(s) 1184
AxyI CCTNAGG 1 cut(s) 1326
BaeI ACNNNNGTAYC 2 cut(s) 1247, 1280
BanI GGYRCC 2 cut(s) 725, 1255
BanII GRGCYC 1 cut(s) 597
BbsI GAAGAC 2 cut(s) 654, 902
Bbv12I GWGCWC 1 cut(s) 597
BbvI GCAGC 1 cut(s) 417
BccI CCATC 6 cut(s) 401, 538, 574, 1155, 1238, 1279
BcgI CGANNNNNNTGC 2 cut(s) 852, 886
BciT130I CCWGG 2 cut(s) 399, 510
BciVI GTATCC 1 cut(s) 914
BclI TGATCA 2 cut(s) 658, 798
BcoDI GTCTC 1 cut(s) 339
BfaI CTAG 3 cut(s) 341, 1304, 1359
BfmI CTRYAG 1 cut(s) 951
BfrI CTTAAG 3 cut(s) 205, 248, 1045
BfuAI ACCTGC 1 cut(s) 1127
BfuI GTATCC 1 cut(s) 914
BglII AGATCT 1 cut(s) 1060
BisI GCNGC 1 cut(s) 431
BlsI GCNGC 1 cut(s) 432
BmcAI AGTACT 1 cut(s) 18
Bme1390I CCNGG 2 cut(s) 399, 510
Bme18I GGWCC 1 cut(s) 1184
BmeT110I CYCGRG 1 cut(s) 606
BmgBI CACGTC 1 cut(s) 652
BmgT120I GGNCC 2 cut(s) 257, 1184
BmiI GGNNCC 5 cut(s) 129, 727, 1186, 1257, 1323
BmrFI CCNGG 2 cut(s) 399, 510
BmrI ACTGGG 1 cut(s) 998
BmsI GCATC 2 cut(s) 493, 689
BmuI ACTGGG 1 cut(s) 998
BpiI GAAGAC 2 cut(s) 654, 902
BplI GAGNNNNNCTC 2 cut(s) 1300, 1332
BpuEI CTTGAG 3 cut(s) 57, 136, 353
BsaAI YACGTR 1 cut(s) 769
BsaJI CCNNGG 6 cut(s) 729, 915, 1191, 1197, 1275, 1281
Bsc4I CCNNNNNNNGG 1 cut(s) 239
Bse118I RCCGGY 1 cut(s) 1171
Bse1I ACTGG 5 cut(s) 131, 578, 684, 691, 993
Bse21I CCTNAGG 1 cut(s) 1326
Bse3DI GCAATG 3 cut(s) 476, 534, 937
BseBI CCWGG 2 cut(s) 399, 510
BseDI CCNNGG 6 cut(s) 729, 915, 1191, 1197, 1275, 1281
BseGI GGATG 4 cut(s) 680, 1166, 1249, 1271
BseLI CCNNNNNNNGG 1 cut(s) 239
BseMI GCAATG 3 cut(s) 476, 534, 937
BseMII CTCAG 4 cut(s) 27, 105, 1230, 1331
BseNI ACTGG 5 cut(s) 131, 578, 684, 691, 993
BsePI GCGCGC 1 cut(s) 481
BseRI GAGGAG 2 cut(s) 60, 392
BseXI GCAGC 1 cut(s) 417
BsgI GTGCAG 1 cut(s) 1155
Bsh1236I CGCG 2 cut(s) 483, 1132
BshFI GGCC 3 cut(s) 259, 1196, 1280
BshNI GGYRCC 2 cut(s) 725, 1255
BsiHKAI GWGCWC 1 cut(s) 597
BsiHKCI CYCGRG 1 cut(s) 606
BsiSI CCGG 2 cut(s) 56, 1172
BslFI GGGAC 1 cut(s) 1179
BslI CCNNNNNNNGG 1 cut(s) 239
BsmAI GTCTC 1 cut(s) 339
BsmFI GGGAC 1 cut(s) 1179
BsnI GGCC 3 cut(s) 259, 1196, 1280
BsoBI CYCGRG 1 cut(s) 606
Bsp1286I GDGCHC 1 cut(s) 597
Bsp143I GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
Bsp19I CCATGG 1 cut(s) 1281
BspACI CCGC 4 cut(s) 459, 531, 539, 1188
BspANI GGCC 3 cut(s) 259, 1196, 1280
BspCNI CTCAG 4 cut(s) 26, 104, 1231, 1330
BspFNI CGCG 2 cut(s) 483, 1132
BspHI TCATGA 1 cut(s) 637
BspLI GGNNCC 5 cut(s) 129, 727, 1186, 1257, 1323
BspMAI CTGCAG 1 cut(s) 955
BspMI ACCTGC 1 cut(s) 1127
BspPI GGATC 2 cut(s) 605, 1370
BspT107I GGYRCC 2 cut(s) 725, 1255
BspTI CTTAAG 3 cut(s) 205, 248, 1045
BsrDI GCAATG 3 cut(s) 476, 534, 937
BsrFI RCCGGY 1 cut(s) 1171
BsrI ACTGG 5 cut(s) 131, 578, 684, 691, 993
BssAI RCCGGY 1 cut(s) 1171
BssECI CCNNGG 6 cut(s) 729, 915, 1191, 1197, 1275, 1281
BssHII GCGCGC 1 cut(s) 481
BssMI GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
BssT1I CCWWGG 5 cut(s) 729, 915, 1191, 1197, 1281
Bst2UI CCWGG 2 cut(s) 399, 510
Bst4CI ACNGT 1 cut(s) 290
BstAFI CTTAAG 3 cut(s) 205, 248, 1045
BstBAI YACGTR 1 cut(s) 769
BstC8I GCNNGC 2 cut(s) 483, 1134
BstDEI CTNAG 7 cut(s) 13, 91, 1073, 1239, 1317, 1326, 1349
BstDSI CCRYGG 1 cut(s) 1281
BstEII GGTNACC 1 cut(s) 442
BstF5I GGATG 4 cut(s) 680, 1166, 1249, 1271
BstFNI CGCG 2 cut(s) 483, 1132
BstHHI GCGC 3 cut(s) 483, 485, 557
BstKTI GATC 8 cut(s) 613, 661, 713, 801, 1052, 1063, 1355, 1365
BstMAI GTCTC 1 cut(s) 339
BstMBI GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
BstMWI GCNNNNNNNGC 4 cut(s) 482, 545, 554, 1187
BstNI CCWGG 2 cut(s) 399, 510
BstNSI RCATGY 3 cut(s) 459, 563, 630
BstPI GGTNACC 1 cut(s) 442
BstSCI CCNGG 2 cut(s) 397, 508
BstSFI CTRYAG 1 cut(s) 951
BstUI CGCG 2 cut(s) 483, 1132
BstV1I GCAGC 1 cut(s) 417
BstV2I GAAGAC 2 cut(s) 654, 902
BstX2I RGATCY 2 cut(s) 610, 1060
BstXI CCANNNNNNTGG 1 cut(s) 1198
BstYI RGATCY 2 cut(s) 610, 1060
Bsu36I CCTNAGG 1 cut(s) 1326
BsuI GTATCC 1 cut(s) 914
BsuRI GGCC 3 cut(s) 259, 1196, 1280
BtgI CCRYGG 1 cut(s) 1281
BtrI CACGTC 1 cut(s) 652
BtsCI GGATG 4 cut(s) 680, 1166, 1249, 1271
BtsIMutI CAGTG 4 cut(s) 585, 986, 1059, 1236
BveI ACCTGC 1 cut(s) 1127
Cac8I GCNNGC 2 cut(s) 483, 1134
CaiI CAGNNNCTG 1 cut(s) 404
CciI TCATGA 1 cut(s) 637
CfoI GCGC 3 cut(s) 483, 485, 557
Cfr10I RCCGGY 1 cut(s) 1171
Cfr13I GGNCC 2 cut(s) 257, 1184
Csp6I GTAC 4 cut(s) 17, 905, 1070, 1256
CviQI GTAC 4 cut(s) 17, 905, 1070, 1256
DdeI CTNAG 7 cut(s) 13, 91, 1073, 1239, 1317, 1326, 1349
DpnI GATC 8 cut(s) 612, 660, 712, 800, 1051, 1062, 1354, 1364
DpnII GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
DraIII CACNNNGTG 1 cut(s) 498
EaeI YGGCCR 1 cut(s) 1278
Ecl136II GAGCTC 1 cut(s) 595
Eco130I CCWWGG 5 cut(s) 729, 915, 1191, 1197, 1281
Eco147I AGGCCT 1 cut(s) 1196
Eco24I GRGCYC 1 cut(s) 597
Eco47I GGWCC 1 cut(s) 1184
Eco53kI GAGCTC 1 cut(s) 595
Eco57I CTGAAG 1 cut(s) 5
Eco81I CCTNAGG 1 cut(s) 1326
Eco88I CYCGRG 1 cut(s) 606
Eco91I GGTNACC 1 cut(s) 442
EcoICRI GAGCTC 1 cut(s) 595
EcoO109I RGGNCCY 1 cut(s) 257
EcoO65I GGTNACC 1 cut(s) 442
EcoRII CCWGG 2 cut(s) 397, 508
EcoT14I CCWWGG 5 cut(s) 729, 915, 1191, 1197, 1281
EcoT22I ATGCAT 2 cut(s) 875, 937
EcoT38I GRGCYC 1 cut(s) 597
ErhI CCWWGG 5 cut(s) 729, 915, 1191, 1197, 1281
FaqI GGGAC 1 cut(s) 1179
FauI CCCGC 1 cut(s) 1195
FbaI TGATCA 2 cut(s) 658, 798
Fnu4HI GCNGC 1 cut(s) 431
FokI GGATG 4 cut(s) 667, 1173, 1256, 1258
FriOI GRGCYC 1 cut(s) 597
Fsp4HI GCNGC 1 cut(s) 431
FspBI CTAG 3 cut(s) 341, 1304, 1359
GlaI GCGC 3 cut(s) 482, 484, 556
GluI GCNGC 1 cut(s) 431
HaeIII GGCC 3 cut(s) 259, 1196, 1280
HapII CCGG 2 cut(s) 56, 1172
HhaI GCGC 3 cut(s) 483, 485, 557
Hin6I GCGC 3 cut(s) 481, 483, 555
HinP1I GCGC 3 cut(s) 481, 483, 555
HinfI GANTC 1 cut(s) 741
HpaII CCGG 2 cut(s) 56, 1172
HphI GGTGA 4 cut(s) 202, 302, 454, 1021
Hpy166II GTNNAC 1 cut(s) 368
Hpy188I TCNGA 3 cut(s) 94, 406, 1123
Hpy188III TCNNGA 5 cut(s) 74, 526, 608, 638, 1319
Hpy8I GTNNAC 1 cut(s) 368
HpyAV CCTTC 7 cut(s) 104, 168, 237, 248, 287, 755, 1009
HpyCH4III ACNGT 1 cut(s) 290
HpyCH4IV ACGT 4 cut(s) 651, 768, 907, 1218
HpyF10VI GCNNNNNNNGC 4 cut(s) 482, 545, 554, 1187
HpyF3I CTNAG 7 cut(s) 13, 91, 1073, 1239, 1317, 1326, 1349
HpySE526I ACGT 4 cut(s) 651, 768, 907, 1218
HspAI GCGC 3 cut(s) 481, 483, 555
KpnI GGTACC 1 cut(s) 1259
Ksp22I TGATCA 2 cut(s) 658, 798
Kzo9I GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
LmnI GCTCC 2 cut(s) 522, 788
Lsp1109I GCAGC 1 cut(s) 417
LweI GCATC 2 cut(s) 493, 689
MaeI CTAG 3 cut(s) 341, 1304, 1359
MaeII ACGT 4 cut(s) 651, 768, 907, 1218
MaeIII GTNAC 5 cut(s) 143, 325, 442, 686, 1340
MalI GATC 8 cut(s) 612, 660, 712, 800, 1051, 1062, 1354, 1364
MboI GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
MboII GAAGA 4 cut(s) 659, 902, 1024, 1049
MfeI CAATTG 1 cut(s) 38
MflI RGATCY 2 cut(s) 610, 1060
MhlI GDGCHC 1 cut(s) 597
MluCI AATT 9 cut(s) 38, 172, 351, 391, 411, 621, 771, 840, 1153
MluI ACGCGT 1 cut(s) 1130
MlyI GAGTC 1 cut(s) 750
MmeI TCCRAC 1 cut(s) 971
Mph1103I ATGCAT 2 cut(s) 875, 937
MseI TTAA 9 cut(s) 165, 186, 206, 249, 390, 837, 843, 1046, 1112
MslI CAYNNNNRTG 4 cut(s) 642, 666, 900, 1370
MspCI CTTAAG 3 cut(s) 205, 248, 1045
MspI CCGG 2 cut(s) 56, 1172
MspR9I CCNGG 2 cut(s) 399, 510
MunI CAATTG 1 cut(s) 38
MvaI CCWGG 2 cut(s) 399, 510
MvnI CGCG 2 cut(s) 483, 1132
MwoI GCNNNNNNNGC 4 cut(s) 482, 545, 554, 1187
NcoI CCATGG 1 cut(s) 1281
NdeII GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
NlaIV GGNNCC 5 cut(s) 129, 727, 1186, 1257, 1323
NmeAIII GCCGAG 1 cut(s) 1256
NmuCI GTSAC 2 cut(s) 325, 442
NsiI ATGCAT 2 cut(s) 875, 937
NspI RCATGY 3 cut(s) 459, 563, 630
PaeR7I CTCGAG 1 cut(s) 606
PagI TCATGA 1 cut(s) 637
PauI GCGCGC 1 cut(s) 481
PceI AGGCCT 1 cut(s) 1196
PciI ACATGT 1 cut(s) 626
PkrI GCNGC 1 cut(s) 432
PleI GAGTC 1 cut(s) 749
PpsI GAGTC 1 cut(s) 749
Ppu21I YACGTR 1 cut(s) 769
PscI ACATGT 1 cut(s) 626
PshBI ATTAAT 1 cut(s) 843
PsiI TTATAA 1 cut(s) 50
Psp124BI GAGCTC 1 cut(s) 597
Psp6I CCWGG 2 cut(s) 397, 508
PspEI GGTNACC 1 cut(s) 442
PspGI CCWGG 2 cut(s) 397, 508
PspN4I GGNNCC 5 cut(s) 129, 727, 1186, 1257, 1323
PspPI GGNCC 2 cut(s) 257, 1184
PstI CTGCAG 1 cut(s) 955
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 2 cut(s) 610, 1060
PteI GCGCGC 1 cut(s) 481
RsaI GTAC 4 cut(s) 18, 906, 1071, 1257
RsaNI GTAC 4 cut(s) 17, 905, 1070, 1256
RseI CAYNNNNRTG 4 cut(s) 642, 666, 900, 1370
SacI GAGCTC 1 cut(s) 597
SaqAI TTAA 9 cut(s) 165, 186, 206, 249, 390, 837, 843, 1046, 1112
SatI GCNGC 1 cut(s) 431
Sau3AI GATC 8 cut(s) 610, 658, 710, 798, 1049, 1060, 1352, 1362
Sau96I GGNCC 2 cut(s) 257, 1184
ScaI AGTACT 1 cut(s) 18
SchI GAGTC 1 cut(s) 750
ScrFI CCNGG 2 cut(s) 399, 510
SduI GDGCHC 1 cut(s) 597
SfaNI GCATC 2 cut(s) 493, 689
SfcI CTRYAG 1 cut(s) 951
Sfr274I CTCGAG 1 cut(s) 606
SinI GGWCC 1 cut(s) 1184
SlaI CTCGAG 1 cut(s) 606
SmiMI CAYNNNNRTG 4 cut(s) 642, 666, 900, 1370
SmlI CTYRAG 7 cut(s) 72, 115, 205, 248, 332, 606, 1045
SmoI CTYRAG 7 cut(s) 72, 115, 205, 248, 332, 606, 1045
Sse9I AATT 9 cut(s) 38, 172, 351, 391, 411, 621, 771, 840, 1153
SseBI AGGCCT 1 cut(s) 1196
SsiI CCGC 4 cut(s) 459, 531, 539, 1188
SspI AATATT 2 cut(s) 1091, 1251
SspMI CTAG 3 cut(s) 341, 1304, 1359
SstI GAGCTC 1 cut(s) 597
StuI AGGCCT 1 cut(s) 1196
StyD4I CCNGG 2 cut(s) 397, 508
StyI CCWWGG 5 cut(s) 729, 915, 1191, 1197, 1281
TaaI ACNGT 1 cut(s) 290
TaiI ACGT 4 cut(s) 654, 771, 910, 1221
TaqI TCGA 4 cut(s) 279, 607, 862, 1097
TasI AATT 9 cut(s) 38, 172, 351, 391, 411, 621, 771, 840, 1153
TatI WGTACW 1 cut(s) 16
Tru1I TTAA 9 cut(s) 165, 186, 206, 249, 390, 837, 843, 1046, 1112
Tru9I TTAA 9 cut(s) 165, 186, 206, 249, 390, 837, 843, 1046, 1112
TscAI CASTG 4 cut(s) 585, 993, 1059, 1243
TseFI GTSAC 2 cut(s) 325, 442
TseI GCWGC 1 cut(s) 430
Tsp45I GTSAC 2 cut(s) 325, 442
TspDTI ATGAA 8 cut(s) 457, 623, 654, 660, 858, 1046, 1050, 1083
TspRI CASTG 4 cut(s) 585, 993, 1059, 1243
Vha464I CTTAAG 3 cut(s) 205, 248, 1045
VpaK11BI GGWCC 1 cut(s) 1184
VspI ATTAAT 1 cut(s) 843
XapI RAATTY 1 cut(s) 351
XceI RCATGY 3 cut(s) 459, 563, 630
XcmI CCANNNNNNNNNTGG 1 cut(s) 541
XhoI CTCGAG 1 cut(s) 606
XspI CTAG 3 cut(s) 341, 1304, 1359
ZrmI AGTACT 1 cut(s) 18
Zsp2I ATGCAT 2 cut(s) 875, 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.