MD12G1039400.v1.1

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000190
Physical Location & Seq
Reverse (-)
4282845 .. 4287833
4989 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1039400.v1.1.491

Sequence Viewer

Length: 1371 bp
ATGGCATCCCTTCCTAGTTCTTTGGTGTTCACAGTGCGGAGGTGCCAACCAGAACTGGTAGCGCCGGCGAAGGCCACGCCGTATGAGTTTCGGCAACTTTCTGATATCGATGACCAAGAAGGTCTTCGGTTTCAGATGCCCGGGCTACAGTTTTATCGGTACGATCCTTCTATGCAAGGGAGGGACCCCGTACATGTCATTAGAGAGGCAATTGCACAAACTCTAGTGTTTTACTACCCTTTTGCAGGTAGGCTCAGGGAAGGGCCTAACCGGAAGCTTGCAGTGGAATGCACGGCTGAGGGTATCATGTTCATTGAGGCTGACGCTGACATTACCCTAAAGCAGTTTGGTGACAACCTTCAGCCGCCGTTTCCCTGCTTGGAAGAGCTTCTTTATAATGTTCCTGGTTCCGATGGGGTCCTTAATTGCCCACTCTTACTAATTCAGGTGACGCGCCTCCAGTGCGGTGGTTTCATCTTCGCCCTCCGTCTTAACCACACCATGAGCGACGCGGCGGGGCTCGTCCAATTCATGACTGCCGTAGGAGAGATAGCGCGCGGCGCAACTTTCCCTACCGTCCAGCCCGTGTGGCAGCGGGAGCTGCTCAATGCGCGTGACCCACTCCGCGTGACATGCCCGCACCGCGAGTACGAAGAAGTGGAAAACACCAAAGGCACCATAATCCCACCTGATGACATGGTCCTCCGGTCCTTTTTCTTCCGCCCCACCGAGGTGTCCGCCATCCGAAGATTTGTCCCGCAGTACCTTAGCAAAAGCTCCACGTTCGAGGTCCTCACGGCCTGCCTCTGGCGCTGCCGTACCATCGCGCTCCAGAAAGACCCAAATGAGGAGGTGCGCGTGTTGTGCGTTGTGAACGCGCGGTCCAAGTTCAACCCTCCGTTGCCGGTGGGTTACTACGGCAACGCGCTTGCGTACCCGGTGGCGGTGACGACGGCAGGGAGGCTATGCAACAATCCATTGGGGTACGCGTTGGAGCTGGTGAGGAAGGCCAAGGCGGACATGACGGAGGAGCACATGCGGTCGTTGGCTGCCCTCATGGTTATTAAGGGTAGGCCCCACTTCACGGTGGTGAATTCTTACGTTATGTCGGATTTAACCCGTGCTGGGTTCCGAGAGGTGGATTTTGGGTGGGGGAAAGCGGCTTATGGTGGGCCAGCGAAGGGCAGGGTCGTCGCTAGCTATTACATACCGTTTAGAGACAATAGAGGGGAAGATGGGATTGTGGTTCCCGTTTGTTTACCGGCCGTGGCGATGGAGAAATTTATCAAGGAACTAGATGCCATGTTGAATGCGGATGAAGAACTGATTAGGGTTCATAGCTCTACTAAATATATTTTGTCTGCCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

457

Amino Acids

51.08

Weight (kDa)

6.99

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 15 - 433 3.9e-81 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
Acc36I ACCTGC 1 cut(s) 236
AccB1I GGYRCC 2 cut(s) 42, 674
AclWI GGATC 1 cut(s) 158
AcoI YGGCCR 1 cut(s) 1263
AcsI RAATTY 2 cut(s) 1093, 1280
AcuI CTGAAG 1 cut(s) 344
AfaI GTAC 7 cut(s) 161, 192, 650, 764, 820, 935, 986
AfiI CCNNNNNNNGG 9 cut(s) 245, 730, 807, 847, 943, 1084, 1125, 1138, 1181
AflIII ACRYGT 2 cut(s) 193, 987
AgsI TTSAA 2 cut(s) 892, 1309
AjnI CCWGG 1 cut(s) 403
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AleI CACNNNNGTG 2 cut(s) 731, 1088
AloI GAACNNNNNNTCC 2 cut(s) 866, 898
AluBI AGCT 7 cut(s) 277, 388, 601, 777, 997, 1200, 1341
AluI AGCT 7 cut(s) 277, 388, 601, 777, 997, 1200, 1341
Alw21I GWGCWC 1 cut(s) 1035
Alw26I GTCTC 1 cut(s) 1212
AlwI GGATC 1 cut(s) 158
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 7 cut(s) 72, 263, 798, 1008, 1073, 1172, 1263
ApeKI GCWGC 4 cut(s) 592, 601, 813, 1049
ApoI RAATTY 2 cut(s) 1093, 1280
Asp700I GAANNNNTTC 2 cut(s) 123, 387
AspS9I GGNCC 9 cut(s) 184, 263, 418, 700, 708, 790, 882, 1074, 1172
AsuC2I CCSGG 3 cut(s) 141, 142, 938
AsuHPI GGTGA 5 cut(s) 362, 460, 958, 1012, 1102
AsuNHI GCTAGC 1 cut(s) 1196
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 6 cut(s) 184, 418, 700, 708, 790, 882
BanI GGYRCC 2 cut(s) 42, 674
BanII GRGCYC 1 cut(s) 522
BbsI GAAGAC 1 cut(s) 116
Bbv12I GWGCWC 1 cut(s) 1035
BbvCI CCTCAGC 1 cut(s) 297
BbvI GCAGC 4 cut(s) 588, 604, 800, 1036
BccI CCATC 5 cut(s) 407, 749, 830, 1229, 1267
BceAI ACGGC 9 cut(s) 64, 309, 352, 524, 801, 813, 934, 969, 1250
BcgI CGANNNNNNTGC 2 cut(s) 1174, 1208
BciT130I CCWGG 1 cut(s) 405
BcnI CCSGG 3 cut(s) 141, 142, 938
BcoDI GTCTC 1 cut(s) 1212
BfaI CTAG 4 cut(s) 15, 224, 1197, 1295
BfmI CTRYAG 1 cut(s) 146
BfoI RGCGCY 2 cut(s) 65, 814
BfuAI ACCTGC 1 cut(s) 236
BglI GCCNNNNNGGC 1 cut(s) 589
BisI GCNGC 8 cut(s) 365, 513, 559, 593, 602, 814, 1050, 1161
BlsI GCNGC 8 cut(s) 366, 514, 560, 594, 603, 815, 1051, 1162
Bme1390I CCNGG 4 cut(s) 141, 142, 405, 938
Bme18I GGWCC 6 cut(s) 184, 418, 700, 708, 790, 882
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 9 cut(s) 184, 263, 418, 700, 708, 790, 882, 1074, 1172
BmiI GGNNCC 9 cut(s) 44, 185, 186, 409, 419, 676, 1076, 1130, 1248
BmrFI CCNGG 4 cut(s) 141, 142, 405, 938
BmsI GCATC 3 cut(s) 14, 126, 1288
BmtI GCTAGC 1 cut(s) 1200
BpiI GAAGAC 1 cut(s) 116
BpmI CTGGAG 2 cut(s) 443, 815
Bpu10I CCTNAGC 3 cut(s) 254, 297, 767
BpuMI CCSGG 3 cut(s) 141, 142, 938
Bsa29I ATCGAT 1 cut(s) 108
BsaJI CCNNGG 4 cut(s) 140, 729, 1011, 1266
BsaWI WCCGGW 2 cut(s) 270, 705
Bsc4I CCNNNNNNNGG 9 cut(s) 245, 730, 807, 847, 943, 1084, 1125, 1138, 1181
Bse118I RCCGGY 3 cut(s) 64, 904, 1261
Bse1I ACTGG 2 cut(s) 60, 460
BseBI CCWGG 1 cut(s) 405
BseCI ATCGAT 1 cut(s) 108
BseDI CCNNGG 4 cut(s) 140, 729, 1011, 1266
BseGI GGATG 3 cut(s) 5, 741, 1321
BseLI CCNNNNNNNGG 9 cut(s) 245, 730, 807, 847, 943, 1084, 1125, 1138, 1181
BseMII CTCAG 2 cut(s) 268, 288
BseNI ACTGG 2 cut(s) 60, 460
BsePI GCGCGC 1 cut(s) 554
BseRI GAGGAG 2 cut(s) 863, 1043
BseX3I CGGCCG 1 cut(s) 1263
BseXI GCAGC 4 cut(s) 588, 604, 800, 1036
BseYI CCCAGC 1 cut(s) 1124
Bsh1285I CGRYCG 2 cut(s) 1043, 1266
BshFI GGCC 7 cut(s) 74, 265, 800, 1010, 1075, 1174, 1265
BshNI GGYRCC 2 cut(s) 42, 674
BshVI ATCGAT 1 cut(s) 108
BsiEI CGRYCG 2 cut(s) 1043, 1266
BsiHKAI GWGCWC 1 cut(s) 1035
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 7 cut(s) 65, 141, 271, 706, 905, 938, 1262
BslFI GGGAC 2 cut(s) 197, 740
BslI CCNNNNNNNGG 9 cut(s) 245, 730, 807, 847, 943, 1084, 1125, 1138, 1181
BsmAI GTCTC 1 cut(s) 1212
BsmFI GGGAC 2 cut(s) 197, 740
BsmI GAATGC 2 cut(s) 293, 1315
BsnI GGCC 7 cut(s) 74, 265, 800, 1010, 1075, 1174, 1265
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 2 cut(s) 522, 1035
Bsp143I GATC 1 cut(s) 163
BspANI GGCC 7 cut(s) 74, 265, 800, 1010, 1075, 1174, 1265
BspCNI CTCAG 2 cut(s) 267, 289
BspDI ATCGAT 1 cut(s) 108
BspHI TCATGA 1 cut(s) 531
BspLI GGNNCC 9 cut(s) 44, 185, 186, 409, 419, 676, 1076, 1130, 1248
BspMI ACCTGC 1 cut(s) 236
BspOI GCTAGC 1 cut(s) 1200
BspPI GGATC 1 cut(s) 158
BspQI GCTCTTC 1 cut(s) 378
BspT107I GGYRCC 2 cut(s) 42, 674
BsrFI RCCGGY 3 cut(s) 64, 904, 1261
BsrI ACTGG 2 cut(s) 60, 460
BssAI RCCGGY 3 cut(s) 64, 904, 1261
BssECI CCNNGG 4 cut(s) 140, 729, 1011, 1266
BssHII GCGCGC 1 cut(s) 554
BssMI GATC 1 cut(s) 163
BssT1I CCWWGG 1 cut(s) 1011
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 5 cut(s) 34, 150, 577, 1087, 1212
Bst6I CTCTTC 1 cut(s) 378
BstC8I GCNNGC 8 cut(s) 66, 279, 556, 638, 802, 930, 1176, 1198
BstDEI CTNAG 3 cut(s) 254, 297, 767
BstDSI CCRYGG 1 cut(s) 1266
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 3 cut(s) 5, 741, 1321
BstH2I RGCGCY 2 cut(s) 65, 814
BstKTI GATC 1 cut(s) 166
BstMAI GTCTC 1 cut(s) 1212
BstMBI GATC 1 cut(s) 163
BstMCI CGRYCG 2 cut(s) 1043, 1266
BstNI CCWGG 1 cut(s) 405
BstNSI RCATGY 3 cut(s) 197, 636, 1039
BstSCI CCNGG 4 cut(s) 139, 140, 403, 936
BstSFI CTRYAG 1 cut(s) 146
BstV1I GCAGC 4 cut(s) 588, 604, 800, 1036
BstV2I GAAGAC 1 cut(s) 116
BstXI CCANNNNNNTGG 1 cut(s) 467
BstZI CGGCCG 1 cut(s) 1263
Bsu15I ATCGAT 1 cut(s) 108
BsuRI GGCC 7 cut(s) 74, 265, 800, 1010, 1075, 1174, 1265
BsuTUI ATCGAT 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 1266
BtgZI GCGATG 2 cut(s) 808, 1286
BtsCI GGATG 3 cut(s) 5, 741, 1321
BtsI GCAGTG 1 cut(s) 288
BtsIMutI CAGTG 3 cut(s) 39, 288, 467
BveI ACCTGC 1 cut(s) 236
Cac8I GCNNGC 8 cut(s) 66, 279, 556, 638, 802, 930, 1176, 1198
CciI TCATGA 1 cut(s) 531
Cfr10I RCCGGY 3 cut(s) 64, 904, 1261
Cfr13I GGNCC 9 cut(s) 184, 263, 418, 700, 708, 790, 882, 1074, 1172
Cfr9I CCCGGG 1 cut(s) 140
ClaI ATCGAT 1 cut(s) 108
CseI GACGC 3 cut(s) 332, 460, 518
Csp6I GTAC 7 cut(s) 160, 191, 649, 763, 819, 934, 985
CviQI GTAC 7 cut(s) 160, 191, 649, 763, 819, 934, 985
DdeI CTNAG 3 cut(s) 254, 297, 767
DpnI GATC 1 cut(s) 165
DpnII GATC 1 cut(s) 163
EaeI YGGCCR 1 cut(s) 1263
EagI CGGCCG 1 cut(s) 1263
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
EciI GGCGGA 3 cut(s) 710, 727, 1031
EclXI CGGCCG 1 cut(s) 1263
Eco130I CCWWGG 1 cut(s) 1011
Eco24I GRGCYC 1 cut(s) 522
Eco32I GATATC 1 cut(s) 106
Eco47I GGWCC 6 cut(s) 184, 418, 700, 708, 790, 882
Eco52I CGGCCG 1 cut(s) 1263
Eco57I CTGAAG 1 cut(s) 344
Eco88I CYCGRG 1 cut(s) 140
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoO109I RGGNCCY 5 cut(s) 184, 263, 418, 790, 1074
EcoRI GAATTC 1 cut(s) 1093
EcoRII CCWGG 1 cut(s) 403
EcoRV GATATC 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 1011
EcoT38I GRGCYC 1 cut(s) 522
ErhI CCWWGG 1 cut(s) 1011
FalI AAGNNNNNCTT 4 cut(s) 108, 140, 375, 407
FaqI GGGAC 2 cut(s) 197, 740
FauI CCCGC 4 cut(s) 508, 588, 645, 765
Fnu4HI GCNGC 8 cut(s) 365, 513, 559, 593, 602, 814, 1050, 1161
FokI GGATG 2 cut(s) 728, 1328
FriOI GRGCYC 1 cut(s) 522
Fsp4HI GCNGC 8 cut(s) 365, 513, 559, 593, 602, 814, 1050, 1161
FspBI CTAG 4 cut(s) 15, 224, 1197, 1295
GluI GCNGC 8 cut(s) 365, 513, 559, 593, 602, 814, 1050, 1161
GsaI CCCAGC 1 cut(s) 1128
GsuI CTGGAG 2 cut(s) 443, 815
HaeII RGCGCY 2 cut(s) 65, 814
HaeIII GGCC 7 cut(s) 74, 265, 800, 1010, 1075, 1174, 1265
HapII CCGG 7 cut(s) 65, 141, 271, 706, 905, 938, 1262
HgaI GACGC 3 cut(s) 332, 460, 518
HindIII AAGCTT 1 cut(s) 275
HpaII CCGG 7 cut(s) 65, 141, 271, 706, 905, 938, 1262
HphI GGTGA 5 cut(s) 362, 460, 958, 1012, 1102
Hpy166II GTNNAC 3 cut(s) 30, 874, 1259
Hpy188I TCNGA 6 cut(s) 103, 135, 412, 746, 1111, 1133
Hpy188III TCNNGA 2 cut(s) 532, 832
Hpy8I GTNNAC 3 cut(s) 30, 874, 1259
Hpy99I CGWCG 3 cut(s) 512, 955, 1196
HpyAV CCTTC 8 cut(s) 20, 64, 113, 177, 254, 368, 1000, 1174
HpyCH4III ACNGT 5 cut(s) 34, 150, 577, 1087, 1212
HpyCH4IV ACGT 2 cut(s) 782, 1101
HpyCH4V TGCA 6 cut(s) 175, 215, 245, 281, 291, 969
HpyF3I CTNAG 3 cut(s) 254, 297, 767
HpySE526I ACGT 2 cut(s) 782, 1101
KflI GGGWCCC 1 cut(s) 184
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Kzo9I GATC 1 cut(s) 163
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 5 cut(s) 598, 782, 834, 994, 1030
Lsp1109I GCAGC 4 cut(s) 588, 604, 800, 1036
LweI GCATC 3 cut(s) 14, 126, 1288
MaeI CTAG 4 cut(s) 15, 224, 1197, 1295
MaeII ACGT 2 cut(s) 782, 1101
MaeIII GTNAC 6 cut(s) 350, 448, 614, 628, 911, 946
MalI GATC 1 cut(s) 165
MboI GATC 1 cut(s) 163
MboII GAAGA 8 cut(s) 116, 395, 469, 665, 709, 759, 1244, 1331
MfeI CAATTG 1 cut(s) 210
MhlI GDGCHC 2 cut(s) 522, 1035
MluCI AATT 6 cut(s) 210, 424, 441, 527, 1093, 1280
MluI ACGCGT 1 cut(s) 987
MmeI TCCRAC 2 cut(s) 972, 1089
MreI CGCCGGCG 1 cut(s) 64
MroNI GCCGGC 1 cut(s) 64
MroXI GAANNNNTTC 2 cut(s) 123, 387
MseI TTAA 4 cut(s) 423, 492, 1065, 1115
MslI CAYNNNNRTG 2 cut(s) 731, 1088
MspA1I CMGCKG 1 cut(s) 595
MspI CCGG 7 cut(s) 65, 141, 271, 706, 905, 938, 1262
MspR9I CCNGG 4 cut(s) 141, 142, 405, 938
MteI GCGCNGCGC 1 cut(s) 559
MunI CAATTG 1 cut(s) 210
Mva1269I GAATGC 2 cut(s) 293, 1315
MvaI CCWGG 1 cut(s) 405
NaeI GCCGGC 1 cut(s) 66
NciI CCSGG 3 cut(s) 141, 142, 938
NdeII GATC 1 cut(s) 163
NgoMIV GCCGGC 1 cut(s) 64
NheI GCTAGC 1 cut(s) 1196
NlaIV GGNNCC 9 cut(s) 44, 185, 186, 409, 419, 676, 1076, 1130, 1248
NmuCI GTSAC 5 cut(s) 350, 448, 614, 628, 946
NspI RCATGY 3 cut(s) 197, 636, 1039
OliI CACNNNNGTG 2 cut(s) 731, 1088
PagI TCATGA 1 cut(s) 531
PauI GCGCGC 1 cut(s) 554
PciI ACATGT 1 cut(s) 193
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 2 cut(s) 293, 1315
PdiI GCCGGC 1 cut(s) 66
PdmI GAANNNNTTC 2 cut(s) 123, 387
PflFI GACNNNGTC 1 cut(s) 698
PkrI GCNGC 8 cut(s) 366, 514, 560, 594, 603, 815, 1051, 1162
PpuMI RGGWCCY 3 cut(s) 184, 418, 790
PscI ACATGT 1 cut(s) 193
PsiI TTATAA 1 cut(s) 396
Psp5II RGGWCCY 3 cut(s) 184, 418, 790
Psp6I CCWGG 1 cut(s) 403
PspFI CCCAGC 1 cut(s) 1124
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 9 cut(s) 44, 185, 186, 409, 419, 676, 1076, 1130, 1248
PspPI GGNCC 9 cut(s) 184, 263, 418, 700, 708, 790, 882, 1074, 1172
PspPPI RGGWCCY 3 cut(s) 184, 418, 790
PsyI GACNNNGTC 1 cut(s) 698
PteI GCGCGC 1 cut(s) 554
RsaI GTAC 7 cut(s) 161, 192, 650, 764, 820, 935, 986
RsaNI GTAC 7 cut(s) 160, 191, 649, 763, 819, 934, 985
RseI CAYNNNNRTG 2 cut(s) 731, 1088
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 4 cut(s) 423, 492, 1065, 1115
SatI GCNGC 8 cut(s) 365, 513, 559, 593, 602, 814, 1050, 1161
Sau3AI GATC 1 cut(s) 163
Sau96I GGNCC 9 cut(s) 184, 263, 418, 700, 708, 790, 882, 1074, 1172
ScrFI CCNGG 4 cut(s) 141, 142, 405, 938
SduI GDGCHC 2 cut(s) 522, 1035
SfaNI GCATC 3 cut(s) 14, 126, 1288
SfcI CTRYAG 1 cut(s) 146
SgrAI CRCCGGYG 1 cut(s) 64
SinI GGWCC 6 cut(s) 184, 418, 700, 708, 790, 882
SmaI CCCGGG 1 cut(s) 142
SmiMI CAYNNNNRTG 2 cut(s) 731, 1088
SrfI GCCCGGGC 1 cut(s) 142
Sse9I AATT 6 cut(s) 210, 424, 441, 527, 1093, 1280
SspMI CTAG 4 cut(s) 15, 224, 1197, 1295
StyD4I CCNGG 4 cut(s) 139, 140, 403, 936
StyI CCWWGG 1 cut(s) 1011
TaaI ACNGT 5 cut(s) 34, 150, 577, 1087, 1212
TaiI ACGT 2 cut(s) 785, 1104
TaqI TCGA 2 cut(s) 108, 786
TasI AATT 6 cut(s) 210, 424, 441, 527, 1093, 1280
TauI GCSGC 4 cut(s) 367, 515, 561, 1163
Tru1I TTAA 4 cut(s) 423, 492, 1065, 1115
Tru9I TTAA 4 cut(s) 423, 492, 1065, 1115
TscAI CASTG 3 cut(s) 39, 288, 467
TseFI GTSAC 5 cut(s) 350, 448, 614, 628, 946
TseI GCWGC 4 cut(s) 592, 601, 813, 1049
Tsp45I GTSAC 5 cut(s) 350, 448, 614, 628, 946
TspDTI ATGAA 5 cut(s) 301, 463, 520, 1325, 1332
TspGWI ACGGA 3 cut(s) 476, 888, 1040
TspMI CCCGGG 1 cut(s) 140
TspRI CASTG 3 cut(s) 39, 288, 467
Tth111I GACNNNGTC 1 cut(s) 698
VpaK11BI GGWCC 6 cut(s) 184, 418, 700, 708, 790, 882
XagI CCTNNNNNAGG 1 cut(s) 243
XapI RAATTY 2 cut(s) 1093, 1280
XceI RCATGY 3 cut(s) 197, 636, 1039
XmaI CCCGGG 1 cut(s) 140
XmnI GAANNNNTTC 2 cut(s) 123, 387
XspI CTAG 4 cut(s) 15, 224, 1197, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.