FvH4_1g08730

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000835
Physical Location & Seq
Forward (+)
4643091 .. 4646037
2947 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08730.t3

Sequence Viewer

Length: 1737 bp
ATGGAAACCCTAAACCCCACCTCCGCCACCGTAGACGACGACGGCGCGAACGTCGGCTTCTCAATCCTGATGCGGTTCACCGACGCCACGAGCCAAATCGACCTCGAAATTCGCAAGCTCATAACAGTAATCTGCCACGTACTGCGAGACCACAAGGCTCCTCCGACGCCGGTGTCCTACTTGCGCGCCGCGTGCTCCTCCCTGGACCTGATCGCCGCCGCGAGGCCCCGACCTTCCAGTGAAGAGCTCCACGCCCGCTTCGCAATCCTCTCCTTCGTCATCCCCAAAGTCCCGACCGCATTTCTCGTCAATAATCTCCAGATGGTCTGCAATTCCTTAGGCCCAGCTCTTCGGGTTGCCTCTCTGATGTGGCATGAAGCTGCCGCCTGCGCCGGAATTAAATGCATTGCTCAATTGCTCATCAGCGTCTCCAATTACAGCTGGTCACAAGTTTCCGAAACCTTTGGGTTCTTACTCAGCTATGCTAATGACAATATGAAGAGTTTTGAGGTGAGAAAACAAGCGCGTTTGATTGTTTACGATACACTCCAAAGTTTTGTAGCAACTCCGCTGCTGTTGGGACCTGCAACTAAAACGATTATGGACTTGTTCATGAACAAGTATCCTATCCGTCCGACCAGTGATGGCCTTATTAGCCTCAAGGCCAGGGATACTTTCGATCTTGTGATAGTATGCCTTGGCGTTATGTCAATCGAGGACAGAACTGCTGTGCTCGTCTACTTGAAAGAGCTCTTGGAACTGCACCATACAAATCTTACAAGGCTCATCACAGATGCTTTGCACAGACTTTTCCTCAACCCATCATTACCTGATGTTCCTCTCGAATTGTTGCTCGAGCTAATATGCTCAATATGTCTTTCTATCTCCCAACACAAGACCAAGTACATCCCGGAAACTGTAGCTAATTTGCTCATTATCGGAGTGCCAAAAATCTATTCCCTAAACAAGCAAATCTGCAAAAATGAACTCCCTATTGTGTTTGATGCACTCATTGTCTTGCTCGAACAGTCAGAAGAAGAAACAGACATCCTTGAAGCAGGAAATGCCTTTAAGTGTCTCATTGCTTATATTGATGACAGCTTGATTAAACAGGGAGTTAACCGTACTCTGATGAACGCAAATATGGACGATGGGAGCCAGTCTGAGCCAACTCTAATTGAAAAACTGTGTGCTACTTTTCAGAAGTTACTTTCTTATCCTGCTGTGCTACGCCTGGTTTTTGAAATTATCTCAGCTATGTTCGAAAAACTAGGAGAATACTCTTCTTATTTGATGAGGGATACAGTCAAAACCTTGGCAGACATGCAGAAATTGCGCGATAAAAGATTCTTTTTAATGGAGGAGGGTAAGCTTCTTCTGAAAATGGTTGTTGAGAAATGTGGGCTTGATGCTATTATGGCCATCATCCCTCAGGAACACATGGAACTGCTTGCAGAGATCAATCAACAACTGGGTTCTAAATCTGTGGATGCGAGTTCTCGCGTAGTCAAAGCAACTACATATGGAAATAACTTATCTCAGTCCATGAATATGCACAAGGATGATCTTAAATATGTAACATTCTTGAATTACAAACTGAAAATAGCTGGTAAAAAGTGTTTGTCTGATCGCCAGCTGAGAGCATGTTTGGATAAGCAGGCTAAGAGGCGTGCTGAGAAGGCCATCAGTGGAGGACTAGTAGGTGCAGCTAAGATGACAAAGAAGCTTAAACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

579

Amino Acids

64.46

Weight (kDa)

8.25

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 8 - 275 6.1e-43 RRP12-like, N-terminal HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 172
Acc36I ACCTGC 1 cut(s) 592
AccI GTMKAC 2 cut(s) 33, 738
AccII CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
AciI CCGC 9 cut(s) 24, 73, 189, 216, 219, 256, 297, 384, 569
AcoI YGGCCR 1 cut(s) 1419
AcsI RAATTY 1 cut(s) 108
AcyI GRCGYC 2 cut(s) 84, 167
AfaI GTAC 3 cut(s) 141, 905, 1126
AfiI CCNNNNNNNGG 1 cut(s) 222
AgsI TTSAA 5 cut(s) 745, 1055, 1181, 1244, 1588
AhlI ACTAGT 1 cut(s) 1696
AjnI CCWGG 3 cut(s) 201, 665, 1233
AjuI GAANNNNNNNTTGG 4 cut(s) 737, 769, 940, 972
Alw21I GWGCWC 4 cut(s) 197, 249, 735, 753
Alw26I GTCTC 3 cut(s) 141, 433, 1082
Ama87I CYCGRG 1 cut(s) 854
AoxI GGCC 6 cut(s) 224, 340, 646, 663, 1419, 1680
ApeKI GCWGC 3 cut(s) 380, 571, 1706
ApoI RAATTY 1 cut(s) 108
AspLEI GCGC 6 cut(s) 47, 186, 188, 392, 526, 1338
AspS9I GGNCC 4 cut(s) 205, 225, 341, 581
AsuC2I CCSGG 1 cut(s) 911
AsuHPI GGTGA 2 cut(s) 70, 523
AsuII TTCGAA 1 cut(s) 1263
AvaI CYCGRG 1 cut(s) 854
AvaII GGWCC 2 cut(s) 205, 581
AxyI CCTNAGG 2 cut(s) 337, 1431
BalI TGGCCA 1 cut(s) 1421
BanII GRGCYC 2 cut(s) 249, 753
BauI CACGAG 1 cut(s) 88
Bbv12I GWGCWC 4 cut(s) 197, 249, 735, 753
BbvI GCAGC 3 cut(s) 367, 558, 1718
BccI CCATC 6 cut(s) 316, 638, 829, 1145, 1430, 1691
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 3 cut(s) 203, 667, 1235
BciVI GTATCC 3 cut(s) 633, 664, 1294
BcnI CCSGG 1 cut(s) 911
BcoDI GTCTC 3 cut(s) 141, 433, 1082
BcuI ACTAGT 1 cut(s) 1696
BfaI CTAG 2 cut(s) 1271, 1697
BfmI CTRYAG 1 cut(s) 918
BfuAI ACCTGC 1 cut(s) 592
BfuI GTATCC 3 cut(s) 633, 664, 1294
BisI GCNGC 7 cut(s) 189, 216, 219, 381, 384, 572, 1707
BlsI GCNGC 7 cut(s) 190, 217, 220, 382, 385, 573, 1708
Bme1390I CCNGG 4 cut(s) 203, 667, 911, 1235
Bme18I GGWCC 2 cut(s) 205, 581
BmeT110I CYCGRG 1 cut(s) 854
BmgT120I GGNCC 4 cut(s) 205, 225, 341, 581
BmiI GGNNCC 4 cut(s) 159, 227, 582, 1157
BmrFI CCNGG 4 cut(s) 203, 667, 911, 1235
BmrI ACTGGG 1 cut(s) 1481
BmsI GCATC 5 cut(s) 60, 784, 994, 1399, 1480
BmuI ACTGGG 1 cut(s) 1481
BpmI CTGGAG 1 cut(s) 302
Bpu14I TTCGAA 1 cut(s) 1263
BpuEI CTTGAG 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 911
BsaAI YACGTR 1 cut(s) 139
BsaHI GRCGYC 2 cut(s) 84, 167
BsaI GGTCTC 1 cut(s) 141
BsaJI CCNNGG 4 cut(s) 201, 666, 697, 1314
BsaXI ACNNNNNCTCC 4 cut(s) 5, 35, 1683, 1713
Bsc4I CCNNNNNNNGG 1 cut(s) 222
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 4 cut(s) 237, 639, 1159, 1476
Bse21I CCTNAGG 2 cut(s) 337, 1431
Bse3DI GCAATG 2 cut(s) 405, 1080
BseBI CCWGG 3 cut(s) 203, 667, 1235
BseDI CCNNGG 4 cut(s) 201, 666, 697, 1314
BseGI GGATG 6 cut(s) 279, 906, 1047, 1425, 1495, 1567
BseLI CCNNNNNNNGG 1 cut(s) 222
BseMI GCAATG 2 cut(s) 405, 1080
BseMII CTCAG 7 cut(s) 490, 1155, 1266, 1445, 1553, 1628, 1665
BseNI ACTGG 4 cut(s) 237, 639, 1159, 1476
BsePI GCGCGC 1 cut(s) 184
BseRI GAGGAG 3 cut(s) 150, 187, 1376
BseXI GCAGC 3 cut(s) 367, 558, 1718
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 2 cut(s) 746, 1725
Bsh1236I CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
Bsh1285I CGRYCG 1 cut(s) 297
BshFI GGCC 6 cut(s) 226, 342, 648, 665, 1421, 1682
BsiEI CGRYCG 1 cut(s) 297
BsiHKAI GWGCWC 4 cut(s) 197, 249, 735, 753
BsiHKCI CYCGRG 1 cut(s) 854
BsiSI CCGG 3 cut(s) 170, 393, 911
BslFI GGGAC 2 cut(s) 275, 594
BslI CCNNNNNNNGG 1 cut(s) 222
BsmAI GTCTC 3 cut(s) 141, 433, 1082
BsmBI CGTCTC 1 cut(s) 433
BsmFI GGGAC 2 cut(s) 275, 594
BsnI GGCC 6 cut(s) 226, 342, 648, 665, 1421, 1682
Bso31I GGTCTC 1 cut(s) 141
BsoBI CYCGRG 1 cut(s) 854
Bsp119I TTCGAA 1 cut(s) 1263
Bsp1286I GDGCHC 4 cut(s) 197, 249, 735, 753
Bsp143I GATC 5 cut(s) 210, 679, 1458, 1564, 1627
BspACI CCGC 9 cut(s) 24, 73, 189, 216, 219, 256, 297, 384, 569
BspANI GGCC 6 cut(s) 226, 342, 648, 665, 1421, 1682
BspCNI CTCAG 7 cut(s) 489, 1156, 1265, 1444, 1552, 1629, 1666
BspFNI CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
BspHI TCATGA 1 cut(s) 612
BspLI GGNNCC 4 cut(s) 159, 227, 582, 1157
BspMI ACCTGC 1 cut(s) 592
BspQI GCTCTTC 2 cut(s) 237, 354
BspT104I TTCGAA 1 cut(s) 1263
BspTNI GGTCTC 1 cut(s) 141
BsrDI GCAATG 2 cut(s) 405, 1080
BsrFI RCCGGY 1 cut(s) 169
BsrI ACTGG 4 cut(s) 237, 639, 1159, 1476
BssAI RCCGGY 1 cut(s) 169
BssECI CCNNGG 4 cut(s) 201, 666, 697, 1314
BssHII GCGCGC 1 cut(s) 184
BssMI GATC 5 cut(s) 210, 679, 1458, 1564, 1627
BssNI GRCGYC 2 cut(s) 84, 167
BssSI CACGAG 1 cut(s) 88
BssT1I CCWWGG 2 cut(s) 697, 1314
Bst2BI CACGAG 1 cut(s) 88
Bst2UI CCWGG 3 cut(s) 203, 667, 1235
Bst4CI ACNGT 7 cut(s) 31, 127, 919, 1029, 1124, 1188, 1306
Bst6I CTCTTC 4 cut(s) 237, 354, 494, 1288
BstACI GRCGYC 2 cut(s) 84, 167
BstAPI GCANNNNNTGC 2 cut(s) 1064, 1333
BstBAI YACGTR 1 cut(s) 139
BstBI TTCGAA 1 cut(s) 1263
BstC8I GCNNGC 9 cut(s) 116, 186, 193, 256, 388, 1452, 1634, 1659, 1671
BstF5I GGATG 6 cut(s) 279, 906, 1047, 1425, 1495, 1567
BstFNI CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
BstHHI GCGC 6 cut(s) 47, 186, 188, 392, 526, 1338
BstKTI GATC 5 cut(s) 213, 682, 1461, 1567, 1630
BstMAI GTCTC 3 cut(s) 141, 433, 1082
BstMBI GATC 5 cut(s) 210, 679, 1458, 1564, 1627
BstMCI CGRYCG 1 cut(s) 297
BstMWI GCNNNNNNNGC 8 cut(s) 192, 260, 389, 654, 1064, 1333, 1418, 1679
BstNI CCWGG 3 cut(s) 203, 667, 1235
BstNSI RCATGY 2 cut(s) 1327, 1647
BstSCI CCNGG 4 cut(s) 201, 665, 909, 1233
BstSFI CTRYAG 1 cut(s) 918
BstUI CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
BstV1I GCAGC 3 cut(s) 367, 558, 1718
Bsu36I CCTNAGG 2 cut(s) 337, 1431
BsuI GTATCC 3 cut(s) 633, 664, 1294
BsuRI GGCC 6 cut(s) 226, 342, 648, 665, 1421, 1682
BtsCI GGATG 6 cut(s) 279, 906, 1047, 1425, 1495, 1567
BtsIMutI CAGTG 3 cut(s) 244, 646, 1693
BveI ACCTGC 1 cut(s) 592
Cac8I GCNNGC 9 cut(s) 116, 186, 193, 256, 388, 1452, 1634, 1659, 1671
CciI TCATGA 1 cut(s) 612
CfoI GCGC 6 cut(s) 47, 186, 188, 392, 526, 1338
Cfr10I RCCGGY 1 cut(s) 169
Cfr13I GGNCC 4 cut(s) 205, 225, 341, 581
CseI GACGC 3 cut(s) 92, 175, 415
Csp6I GTAC 3 cut(s) 140, 904, 1125
CviAII CATG 6 cut(s) 374, 613, 1324, 1441, 1546, 1644
CviQI GTAC 3 cut(s) 140, 904, 1125
DpnI GATC 5 cut(s) 212, 681, 1460, 1566, 1629
DpnII GATC 5 cut(s) 210, 679, 1458, 1564, 1627
DrdI GACNNNNNNGTC 1 cut(s) 172
DseDI GACNNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 1 cut(s) 1419
Eam1104I CTCTTC 4 cut(s) 237, 354, 494, 1288
EarI CTCTTC 4 cut(s) 237, 354, 494, 1288
EciI GGCGGA 1 cut(s) 13
Ecl136II GAGCTC 2 cut(s) 247, 751
Eco130I CCWWGG 2 cut(s) 697, 1314
Eco24I GRGCYC 2 cut(s) 249, 753
Eco31I GGTCTC 1 cut(s) 141
Eco47I GGWCC 2 cut(s) 205, 581
Eco53kI GAGCTC 2 cut(s) 247, 751
Eco81I CCTNAGG 2 cut(s) 337, 1431
Eco88I CYCGRG 1 cut(s) 854
EcoICRI GAGCTC 2 cut(s) 247, 751
EcoO109I RGGNCCY 2 cut(s) 225, 581
EcoRII CCWGG 3 cut(s) 201, 665, 1233
EcoT14I CCWWGG 2 cut(s) 697, 1314
EcoT22I ATGCAT 1 cut(s) 407
EcoT38I GRGCYC 2 cut(s) 249, 753
ErhI CCWWGG 2 cut(s) 697, 1314
Esp3I CGTCTC 1 cut(s) 433
FaeI CATG 6 cut(s) 377, 616, 1327, 1444, 1549, 1647
FaqI GGGAC 2 cut(s) 275, 594
FatI CATG 6 cut(s) 373, 612, 1323, 1440, 1545, 1643
FauI CCCGC 1 cut(s) 263
FauNDI CATATG 1 cut(s) 1522
FblI GTMKAC 2 cut(s) 33, 738
Fnu4HI GCNGC 7 cut(s) 189, 216, 219, 381, 384, 572, 1707
FokI GGATG 6 cut(s) 266, 893, 1034, 1412, 1502, 1574
FriOI GRGCYC 2 cut(s) 249, 753
Fsp4HI GCNGC 7 cut(s) 189, 216, 219, 381, 384, 572, 1707
FspBI CTAG 2 cut(s) 1271, 1697
GlaI GCGC 6 cut(s) 46, 185, 187, 391, 525, 1337
GluI GCNGC 7 cut(s) 189, 216, 219, 381, 384, 572, 1707
GsaI CCCAGC 1 cut(s) 347
GsuI CTGGAG 1 cut(s) 302
HaeIII GGCC 6 cut(s) 226, 342, 648, 665, 1421, 1682
HapII CCGG 3 cut(s) 170, 393, 911
HgaI GACGC 3 cut(s) 92, 175, 415
HhaI GCGC 6 cut(s) 47, 186, 188, 392, 526, 1338
Hin1I GRCGYC 2 cut(s) 84, 167
Hin1II CATG 6 cut(s) 377, 616, 1327, 1444, 1549, 1647
Hin6I GCGC 6 cut(s) 45, 184, 186, 390, 524, 1336
HinP1I GCGC 6 cut(s) 45, 184, 186, 390, 524, 1336
HincII GTYRAC 1 cut(s) 1120
HindII GTYRAC 1 cut(s) 1120
HindIII AAGCTT 2 cut(s) 1370, 1724
HinfI GANTC 1 cut(s) 1347
HpaI GTTAAC 1 cut(s) 1120
HpaII CCGG 3 cut(s) 170, 393, 911
HphI GGTGA 2 cut(s) 70, 523
Hpy166II GTNNAC 5 cut(s) 34, 78, 538, 739, 1120
Hpy188III TCNNGA 7 cut(s) 67, 292, 319, 613, 842, 1433, 1585
Hpy8I GTNNAC 5 cut(s) 34, 78, 538, 739, 1120
Hpy99I CGWCG 5 cut(s) 41, 44, 56, 86, 169
HpyAV CCTTC 3 cut(s) 243, 283, 1672
HpyCH4III ACNGT 7 cut(s) 31, 127, 919, 1029, 1124, 1188, 1306
HpyCH4IV ACGT 2 cut(s) 51, 138
HpyF10VI GCNNNNNNNGC 8 cut(s) 192, 260, 389, 654, 1064, 1333, 1418, 1679
HpySE526I ACGT 2 cut(s) 51, 138
Hsp92I GRCGYC 2 cut(s) 84, 167
Hsp92II CATG 6 cut(s) 377, 616, 1327, 1444, 1549, 1647
HspAI GCGC 6 cut(s) 45, 184, 186, 390, 524, 1336
KspAI GTTAAC 1 cut(s) 1120
Kzo9I GATC 5 cut(s) 210, 679, 1458, 1564, 1627
LguI GCTCTTC 2 cut(s) 237, 354
LmnI GCTCC 4 cut(s) 163, 200, 252, 1155
Lsp1109I GCAGC 3 cut(s) 367, 558, 1718
LweI GCATC 5 cut(s) 60, 784, 994, 1399, 1480
MaeI CTAG 2 cut(s) 1271, 1697
MaeII ACGT 2 cut(s) 51, 138
MaeIII GTNAC 3 cut(s) 444, 1206, 1576
MalI GATC 5 cut(s) 212, 681, 1460, 1566, 1629
MboI GATC 5 cut(s) 210, 679, 1458, 1564, 1627
MboII GAAGA 7 cut(s) 254, 341, 511, 1046, 1049, 1275, 1367
MfeI CAATTG 1 cut(s) 413
MhlI GDGCHC 4 cut(s) 197, 249, 735, 753
MlsI TGGCCA 1 cut(s) 1421
MluNI TGGCCA 1 cut(s) 1421
MmeI TCCRAC 2 cut(s) 188, 659
Mox20I TGGCCA 1 cut(s) 1421
Mph1103I ATGCAT 1 cut(s) 407
MscI TGGCCA 1 cut(s) 1421
MseI TTAA 8 cut(s) 399, 1071, 1107, 1119, 1355, 1569, 1728, 1735
MslI CAYNNNNRTG 2 cut(s) 1550, 1560
Msp20I TGGCCA 1 cut(s) 1421
MspA1I CMGCKG 3 cut(s) 441, 571, 1636
MspI CCGG 3 cut(s) 170, 393, 911
MspR9I CCNGG 4 cut(s) 203, 667, 911, 1235
MunI CAATTG 1 cut(s) 413
MvaI CCWGG 3 cut(s) 203, 667, 1235
MvnI CGCG 7 cut(s) 47, 186, 191, 221, 526, 1338, 1503
MwoI GCNNNNNNNGC 8 cut(s) 192, 260, 389, 654, 1064, 1333, 1418, 1679
NciI CCSGG 1 cut(s) 911
NdeI CATATG 1 cut(s) 1522
NdeII GATC 5 cut(s) 210, 679, 1458, 1564, 1627
NlaIII CATG 6 cut(s) 377, 616, 1327, 1444, 1549, 1647
NlaIV GGNNCC 4 cut(s) 159, 227, 582, 1157
NmuCI GTSAC 1 cut(s) 444
NsiI ATGCAT 1 cut(s) 407
NspI RCATGY 2 cut(s) 1327, 1647
NspV TTCGAA 1 cut(s) 1263
PaeR7I CTCGAG 1 cut(s) 854
PagI TCATGA 1 cut(s) 612
PauI GCGCGC 1 cut(s) 184
PciSI GCTCTTC 2 cut(s) 237, 354
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PfeI GAWTC 1 cut(s) 1347
PfoI TCCNGGA 1 cut(s) 909
PkrI GCNGC 7 cut(s) 190, 217, 220, 382, 385, 573, 1708
Ppu21I YACGTR 1 cut(s) 139
PpuMI RGGWCCY 1 cut(s) 581
Psp124BI GAGCTC 2 cut(s) 249, 753
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 3 cut(s) 201, 665, 1233
PspFI CCCAGC 1 cut(s) 343
PspGI CCWGG 3 cut(s) 201, 665, 1233
PspN4I GGNNCC 4 cut(s) 159, 227, 582, 1157
PspPI GGNCC 4 cut(s) 205, 225, 341, 581
PspPPI RGGWCCY 1 cut(s) 581
PspXI VCTCGAGB 1 cut(s) 854
PteI GCGCGC 1 cut(s) 184
PvuII CAGCTG 2 cut(s) 441, 1636
RsaI GTAC 3 cut(s) 141, 905, 1126
RsaNI GTAC 3 cut(s) 140, 904, 1125
RseI CAYNNNNRTG 2 cut(s) 1550, 1560
SacI GAGCTC 2 cut(s) 249, 753
SapI GCTCTTC 2 cut(s) 237, 354
SaqAI TTAA 8 cut(s) 399, 1071, 1107, 1119, 1355, 1569, 1728, 1735
SatI GCNGC 7 cut(s) 189, 216, 219, 381, 384, 572, 1707
Sau3AI GATC 5 cut(s) 210, 679, 1458, 1564, 1627
Sau96I GGNCC 4 cut(s) 205, 225, 341, 581
ScrFI CCNGG 4 cut(s) 203, 667, 911, 1235
SduI GDGCHC 4 cut(s) 197, 249, 735, 753
SfaNI GCATC 5 cut(s) 60, 784, 994, 1399, 1480
SfcI CTRYAG 1 cut(s) 918
Sfr274I CTCGAG 1 cut(s) 854
SfuI TTCGAA 1 cut(s) 1263
SgrAI CRCCGGYG 1 cut(s) 169
SinI GGWCC 2 cut(s) 205, 581
SlaI CTCGAG 1 cut(s) 854
SmiMI CAYNNNNRTG 2 cut(s) 1550, 1560
SmlI CTYRAG 2 cut(s) 659, 854
SmoI CTYRAG 2 cut(s) 659, 854
SpeI ACTAGT 1 cut(s) 1696
SsiI CCGC 9 cut(s) 24, 73, 189, 216, 219, 256, 297, 384, 569
SspMI CTAG 2 cut(s) 1271, 1697
SstI GAGCTC 2 cut(s) 249, 753
StyD4I CCNGG 4 cut(s) 201, 665, 909, 1233
StyI CCWWGG 2 cut(s) 697, 1314
TaaI ACNGT 7 cut(s) 31, 127, 919, 1029, 1124, 1188, 1306
TaiI ACGT 2 cut(s) 54, 141
TaqI TCGA 8 cut(s) 99, 105, 678, 714, 843, 855, 1023, 1263
TatI WGTACW 1 cut(s) 903
TauI GCSGC 4 cut(s) 191, 218, 221, 386
TfiI GAWTC 1 cut(s) 1347
Tru1I TTAA 8 cut(s) 399, 1071, 1107, 1119, 1355, 1569, 1728, 1735
Tru9I TTAA 8 cut(s) 399, 1071, 1107, 1119, 1355, 1569, 1728, 1735
TscAI CASTG 3 cut(s) 244, 646, 1693
TseFI GTSAC 1 cut(s) 444
TseI GCWGC 3 cut(s) 380, 571, 1706
Tsp45I GTSAC 1 cut(s) 444
TspDTI ATGAA 7 cut(s) 390, 512, 601, 629, 999, 1148, 1562
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 3 cut(s) 244, 646, 1693
VpaK11BI GGWCC 2 cut(s) 205, 581
XapI RAATTY 1 cut(s) 108
XceI RCATGY 2 cut(s) 1327, 1647
XhoI CTCGAG 1 cut(s) 854
XmiI GTMKAC 2 cut(s) 33, 738
XspI CTAG 2 cut(s) 1271, 1697
Zsp2I ATGCAT 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.