FvH4_5g06040

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000835
Physical Location & Seq
Reverse (-)
3534538 .. 3536833
2296 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06040.t1

Sequence Viewer

Length: 1680 bp
ATGGAGGACCTGGATTCCAACATCGGCAGCTCGAGCCTGATGCGCTTCACCGATTCGACTCGCAGTCACCACCTCGAAATCCGCAAAATCATCGCCGCGACTGCCCACGGTTTCGTTCCGCGGAGGATTGCTCCCACCGCCGTGTCCTACTTGGATGCCACGTGCTCCTCCTCCTCCGAAGATCACGTGATCGAGGCCGTCGTCACGATTCTCTCCGTACTCATCCCGCTTGTCTCCCCGGAAATTCTTATCGAGAAGGAGAGTGCCAACAAGTCTGTGTCGGCGGCGGTGGCGCGTGTTCTTCGATTCGACACTCGCAATTTGAATCGAGACGCCGCCGTTTTGGGATTGAAGTGCATTTCGCAACTGCTGACTGTCATCCTCACCAGCAATATGGACTCTGCTGCCTGGTCCCATGTCTCTTATTTGTACGAGCTTTTACTGGGTTTCGCAACTACGCGCATCAGTCATGTGCGGAAGCCGTCACATGTTGTGATTGCCGAGATAATGCAAAGTTTGCAAGGCACCGCAGATATTGTGCCTGCAAGTGAAGCCCTTGTTAACTTGTTTGAGAGATGGTGGCTTCCTCTGCTTGGCGGCAATGGCCCCAGTGTCTTGTCTAATGAAGCTGAACCCATCGAGTCCCGGTTTTGTTTGGATGTGATGAAAAGATGTGTGGTCCTGATGCCTACCAAGTTCAAGCTAACAATGCTCAACTGCTTCAAGACCATCTTGGAACTGGCGTTGCATAGAAACTCAATTACAATACGTGTTGAATGGATTTTGGAAAGGTTTTGTCTCCACCCATCAGCACCCAAAGACGTTCCTCCTCACCTGTTGCTTGATCTGTTATGCTTGATTTCGGACTCTGTCACCAAAAGAGCGGCGTTTGATCATGAGGGGACAACTACGGCTTCTATACTCAAAAATGGAGTGTCAACAGTTTACTCCTCCAACTGGGAACTCTGTGTGATCAAACTTCCTCTTGTGTTCGATGCACTCAAAGTTTTGATGGGGATACCTGCAGATCAGGAGGATCACGGGTATATAGAAGAGGACATCGATACAGCAGCACAAGCCTTTAAGCATCTCATTCATACTTGCATCGATGAAGGTTTGATTAATCAGGGACTTGACCAGATCAATAAAATTGCAAGCAGCAAGTCTGAGCCTCCTCAGCCGAAGGAGCTAACTGTAATTGAAAAAATGTGTGCGACTATTGAAAGCCTACTAGGTTATCACCGTACTGGTGCTCATACTTTCAGCATTGACCGTGCATTTGAAGTTGTTTTGACAATGTTTGATAAATTAGGGTCACACTCGTGTTGTTTCATGAGGGGTACACTGGAGAGCTTGGCAGACATGCACAAGTTTGCTGATGAACAATTCCCTTACAGGAAACAGGCTACACTTCTTCTAGGAAGGCTTGTTGAGGAAAAAATTGGGGTTGATGATATTAGTATTAGGGCTGTCCTGACTCAAGAAGAGCTCTTGGGACTGCTTGCAGATTATAGGGACCTTAAATCCAAGCAATCGTCACAACTTTCTCATCTGAAACGGAAGGCGTCAAGTATTGAGCTTATGCCAGATCGTTGTGGTCCATCAAGTATATGGGCTATGGCGGTTACAGTTAGAGAAATATCCAGCACAGAGAAGATGACAAAGAAGATTAAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

560

Amino Acids

62.07

Weight (kDa)

6.19

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 5 - 271 7.5e-43 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 355 - 478 1.4e-10 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1030
AccB1I GGYRCC 1 cut(s) 524
AccBSI CCGCTC 1 cut(s) 884
AccII CGCG 4 cut(s) 98, 121, 295, 460
AclWI GGATC 1 cut(s) 1044
AcsI RAATTY 1 cut(s) 243
AcvI CACGTG 2 cut(s) 162, 187
AcyI GRCGYC 2 cut(s) 333, 1565
AfaI GTAC 4 cut(s) 219, 431, 1246, 1342
AfiI CCNNNNNNNGG 2 cut(s) 593, 957
AflIII ACRYGT 2 cut(s) 487, 769
AgsI TTSAA 8 cut(s) 325, 352, 700, 724, 776, 1202, 1223, 1283
AhdI GACNNNNNGTC 1 cut(s) 63
AjnI CCWGG 2 cut(s) 9, 407
AleI CACNNNNGTG 2 cut(s) 140, 1321
AluBI AGCT 9 cut(s) 30, 436, 629, 703, 1189, 1353, 1489, 1579, 1675
AluI AGCT 9 cut(s) 30, 436, 629, 703, 1189, 1353, 1489, 1579, 1675
Alw21I GWGCWC 3 cut(s) 167, 1255, 1491
Alw26I GTCTC 4 cut(s) 238, 324, 424, 803
AlwI GGATC 1 cut(s) 1044
Ama87I CYCGRG 1 cut(s) 31
AoxI GGCC 2 cut(s) 195, 604
ApeKI GCWGC 4 cut(s) 27, 404, 1070, 1158
ApoI RAATTY 1 cut(s) 243
ArsI GACNNNNNNTTYG 2 cut(s) 1262, 1294
AseI ATTAAT 1 cut(s) 1122
AspLEI GCGC 3 cut(s) 45, 295, 462
AspS9I GGNCC 6 cut(s) 7, 411, 605, 679, 1516, 1598
AsuC2I CCSGG 2 cut(s) 239, 646
AsuHPI GGTGA 6 cut(s) 40, 59, 376, 824, 865, 1232
AvaI CYCGRG 1 cut(s) 31
AvaII GGWCC 5 cut(s) 7, 411, 679, 1516, 1598
BanI GGYRCC 1 cut(s) 524
BanII GRGCYC 1 cut(s) 1491
BauI CACGAG 1 cut(s) 1321
BbrPI CACGTG 2 cut(s) 162, 187
Bbv12I GWGCWC 3 cut(s) 167, 1255, 1491
BbvCI CCTCAGC 1 cut(s) 1176
BbvI GCAGC 4 cut(s) 39, 391, 1082, 1170
BccI CCATC 6 cut(s) 570, 644, 737, 814, 1006, 1609
BceAI ACGGC 5 cut(s) 125, 182, 323, 466, 927
BcgI CGANNNNNNTGC 4 cut(s) 22, 56, 73, 107
BciT130I CCWGG 2 cut(s) 11, 409
BciVI GTATCC 1 cut(s) 1011
BclI TGATCA 2 cut(s) 892, 972
BcnI CCSGG 2 cut(s) 239, 646
BcoDI GTCTC 4 cut(s) 238, 324, 424, 803
BfaI CTAG 2 cut(s) 1232, 1418
BfmI CTRYAG 1 cut(s) 1023
BfuAI ACCTGC 1 cut(s) 1030
BfuI GTATCC 1 cut(s) 1011
BisI GCNGC 9 cut(s) 28, 96, 285, 336, 405, 598, 885, 1071, 1159
BlsI GCNGC 9 cut(s) 29, 97, 286, 337, 406, 599, 886, 1072, 1160
Bme1390I CCNGG 4 cut(s) 11, 239, 409, 646
Bme18I GGWCC 5 cut(s) 7, 411, 679, 1516, 1598
BmeRI GACNNNNNGTC 1 cut(s) 63
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 6 cut(s) 7, 411, 605, 679, 1516, 1598
BmiI GGNNCC 4 cut(s) 413, 526, 607, 1517
BmrFI CCNGG 4 cut(s) 11, 239, 409, 646
BmrI ACTGGG 3 cut(s) 452, 603, 967
BmsI GCATC 7 cut(s) 30, 145, 471, 675, 985, 1096, 1113
BmuI ACTGGG 3 cut(s) 452, 603, 967
BplI GAGNNNNNCTC 2 cut(s) 115, 147
BpmI CTGGAG 1 cut(s) 1367
Bpu10I CCTNAGC 1 cut(s) 1176
BpuEI CTTGAG 1 cut(s) 1464
BpuMI CCSGG 2 cut(s) 239, 646
Bsa29I ATCGAT 2 cut(s) 1062, 1107
BsaAI YACGTR 3 cut(s) 162, 187, 770
BsaHI GRCGYC 2 cut(s) 333, 1565
BsaJI CCNNGG 3 cut(s) 106, 119, 237
Bsc4I CCNNNNNNNGG 2 cut(s) 593, 957
Bse1I ACTGG 6 cut(s) 447, 609, 744, 962, 1252, 1350
Bse3DI GCAATG 1 cut(s) 607
BseBI CCWGG 2 cut(s) 11, 409
BseCI ATCGAT 2 cut(s) 1062, 1107
BseDI CCNNGG 3 cut(s) 106, 119, 237
BseGI GGATG 4 cut(s) 160, 222, 378, 664
BseLI CCNNNNNNNGG 2 cut(s) 593, 957
BseMI GCAATG 1 cut(s) 607
BseMII CTCAG 2 cut(s) 1158, 1190
BseNI ACTGG 6 cut(s) 447, 609, 744, 962, 1252, 1350
BseRI GAGGAG 6 cut(s) 157, 160, 163, 819, 940, 1164
BseXI GCAGC 4 cut(s) 39, 391, 1082, 1170
Bsh1236I CGCG 4 cut(s) 98, 121, 295, 460
BshFI GGCC 2 cut(s) 197, 606
BshNI GGYRCC 1 cut(s) 524
BshVI ATCGAT 2 cut(s) 1062, 1107
BsiHKAI GWGCWC 3 cut(s) 167, 1255, 1491
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 2 cut(s) 239, 646
BslFI GGGAC 6 cut(s) 397, 628, 916, 1143, 1509, 1529
BslI CCNNNNNNNGG 2 cut(s) 593, 957
BsmAI GTCTC 4 cut(s) 238, 324, 424, 803
BsmBI CGTCTC 1 cut(s) 324
BsmFI GGGAC 6 cut(s) 397, 628, 916, 1143, 1509, 1529
BsnI GGCC 2 cut(s) 197, 606
BsoBI CYCGRG 1 cut(s) 31
Bsp1286I GDGCHC 3 cut(s) 167, 1255, 1491
Bsp143I GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
BspANI GGCC 2 cut(s) 197, 606
BspCNI CTCAG 2 cut(s) 1159, 1189
BspDI ATCGAT 2 cut(s) 1062, 1107
BspFNI CGCG 4 cut(s) 98, 121, 295, 460
BspHI TCATGA 2 cut(s) 895, 1332
BspLI GGNNCC 4 cut(s) 413, 526, 607, 1517
BspMAI CTGCAG 1 cut(s) 1027
BspMI ACCTGC 1 cut(s) 1030
BspPI GGATC 1 cut(s) 1044
BspQI GCTCTTC 1 cut(s) 1479
BspT107I GGYRCC 1 cut(s) 524
BsrBI CCGCTC 1 cut(s) 884
BsrDI GCAATG 1 cut(s) 607
BsrI ACTGG 6 cut(s) 447, 609, 744, 962, 1252, 1350
BssECI CCNNGG 3 cut(s) 106, 119, 237
BssMI GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
BssNI GRCGYC 2 cut(s) 333, 1565
BssSI CACGAG 1 cut(s) 1321
Bst2BI CACGAG 1 cut(s) 1321
Bst2UI CCWGG 2 cut(s) 11, 409
Bst4CI ACNGT 7 cut(s) 110, 376, 943, 1195, 1244, 1274, 1630
Bst6I CTCTTC 2 cut(s) 1047, 1479
BstACI GRCGYC 2 cut(s) 333, 1565
BstAPI GCANNNNNTGC 1 cut(s) 517
BstBAI YACGTR 3 cut(s) 162, 187, 770
BstC8I GCNNGC 3 cut(s) 543, 1156, 1503
BstDEI CTNAG 2 cut(s) 1167, 1176
BstDSI CCRYGG 2 cut(s) 106, 119
BstF5I GGATG 4 cut(s) 160, 222, 378, 664
BstFNI CGCG 4 cut(s) 98, 121, 295, 460
BstHHI GCGC 3 cut(s) 45, 295, 462
BstKTI GATC 9 cut(s) 184, 192, 847, 895, 975, 1030, 1039, 1143, 1591
BstMAI GTCTC 4 cut(s) 238, 324, 424, 803
BstMBI GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
BstNI CCWGG 2 cut(s) 11, 409
BstNSI RCATGY 2 cut(s) 491, 1366
BstSCI CCNGG 4 cut(s) 9, 237, 407, 644
BstSFI CTRYAG 1 cut(s) 1023
BstUI CGCG 4 cut(s) 98, 121, 295, 460
BstV1I GCAGC 4 cut(s) 39, 391, 1082, 1170
BstXI CCANNNNNNTGG 1 cut(s) 394
Bsu15I ATCGAT 2 cut(s) 1062, 1107
BsuI GTATCC 1 cut(s) 1011
BsuRI GGCC 2 cut(s) 197, 606
BsuTUI ATCGAT 2 cut(s) 1062, 1107
BtgI CCRYGG 2 cut(s) 106, 119
BtgZI GCGATG 1 cut(s) 76
BtsCI GGATG 4 cut(s) 160, 222, 378, 664
BtsIMutI CAGTG 2 cut(s) 616, 1343
BveI ACCTGC 1 cut(s) 1030
Cac8I GCNNGC 3 cut(s) 543, 1156, 1503
CciI TCATGA 2 cut(s) 895, 1332
CfoI GCGC 3 cut(s) 45, 295, 462
Cfr13I GGNCC 6 cut(s) 7, 411, 605, 679, 1516, 1598
Cfr42I CCGCGG 1 cut(s) 122
ClaI ATCGAT 2 cut(s) 1062, 1107
CseI GACGC 2 cut(s) 341, 1554
Csp6I GTAC 4 cut(s) 218, 430, 1245, 1341
CviAII CATG 6 cut(s) 416, 470, 488, 896, 1333, 1363
CviQI GTAC 4 cut(s) 218, 430, 1245, 1341
DdeI CTNAG 2 cut(s) 1167, 1176
DpnI GATC 9 cut(s) 183, 191, 846, 894, 974, 1029, 1038, 1142, 1590
DpnII GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
DriI GACNNNNNGTC 1 cut(s) 63
Eam1104I CTCTTC 2 cut(s) 1047, 1479
Eam1105I GACNNNNNGTC 1 cut(s) 63
EarI CTCTTC 2 cut(s) 1047, 1479
Ecl136II GAGCTC 1 cut(s) 1489
Eco24I GRGCYC 1 cut(s) 1491
Eco47I GGWCC 5 cut(s) 7, 411, 679, 1516, 1598
Eco53kI GAGCTC 1 cut(s) 1489
Eco72I CACGTG 2 cut(s) 162, 187
Eco88I CYCGRG 1 cut(s) 31
EcoICRI GAGCTC 1 cut(s) 1489
EcoO109I RGGNCCY 2 cut(s) 7, 1516
EcoRII CCWGG 2 cut(s) 9, 407
EcoT38I GRGCYC 1 cut(s) 1491
Esp3I CGTCTC 1 cut(s) 324
FaeI CATG 6 cut(s) 419, 473, 491, 899, 1336, 1366
FalI AAGNNNNNCTT 2 cut(s) 716, 748
FaqI GGGAC 6 cut(s) 397, 628, 916, 1143, 1509, 1529
FatI CATG 6 cut(s) 415, 469, 487, 895, 1332, 1362
FauI CCCGC 1 cut(s) 234
FbaI TGATCA 2 cut(s) 892, 972
Fnu4HI GCNGC 9 cut(s) 28, 96, 285, 336, 405, 598, 885, 1071, 1159
FokI GGATG 4 cut(s) 167, 209, 365, 671
FriOI GRGCYC 1 cut(s) 1491
Fsp4HI GCNGC 9 cut(s) 28, 96, 285, 336, 405, 598, 885, 1071, 1159
FspBI CTAG 2 cut(s) 1232, 1418
GlaI GCGC 3 cut(s) 44, 294, 461
GluI GCNGC 9 cut(s) 28, 96, 285, 336, 405, 598, 885, 1071, 1159
GsuI CTGGAG 1 cut(s) 1367
HaeIII GGCC 2 cut(s) 197, 606
HapII CCGG 2 cut(s) 239, 646
HgaI GACGC 2 cut(s) 341, 1554
HhaI GCGC 3 cut(s) 45, 295, 462
Hin1I GRCGYC 2 cut(s) 333, 1565
Hin1II CATG 6 cut(s) 419, 473, 491, 899, 1336, 1366
Hin6I GCGC 3 cut(s) 43, 293, 460
HinP1I GCGC 3 cut(s) 43, 293, 460
HincII GTYRAC 2 cut(s) 562, 939
HindII GTYRAC 2 cut(s) 562, 939
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 2 cut(s) 239, 646
HphI GGTGA 6 cut(s) 40, 59, 376, 824, 865, 1232
Hpy166II GTNNAC 4 cut(s) 562, 939, 946, 1343
Hpy188I TCNGA 4 cut(s) 178, 865, 1168, 1554
Hpy8I GTNNAC 4 cut(s) 562, 939, 946, 1343
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 5 cut(s) 250, 1106, 1177, 1416, 1555
HpyCH4III ACNGT 7 cut(s) 110, 376, 943, 1195, 1244, 1274, 1630
HpyCH4IV ACGT 4 cut(s) 161, 186, 769, 822
HpyF3I CTNAG 2 cut(s) 1167, 1176
HpySE526I ACGT 4 cut(s) 161, 186, 769, 822
Hsp92I GRCGYC 2 cut(s) 333, 1565
Hsp92II CATG 6 cut(s) 419, 473, 491, 899, 1336, 1366
HspAI GCGC 3 cut(s) 43, 293, 460
Ksp22I TGATCA 2 cut(s) 892, 972
KspAI GTTAAC 1 cut(s) 562
KspI CCGCGG 1 cut(s) 122
Kzo9I GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
LguI GCTCTTC 1 cut(s) 1479
LmnI GCTCC 3 cut(s) 136, 170, 1186
Lsp1109I GCAGC 4 cut(s) 39, 391, 1082, 1170
LweI GCATC 7 cut(s) 30, 145, 471, 675, 985, 1096, 1113
MaeI CTAG 2 cut(s) 1232, 1418
MaeII ACGT 4 cut(s) 161, 186, 769, 822
MaeIII GTNAC 7 cut(s) 65, 202, 483, 871, 1314, 1536, 1624
MalI GATC 9 cut(s) 183, 191, 846, 894, 974, 1029, 1038, 1142, 1590
MbiI CCGCTC 1 cut(s) 884
MboI GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
MboII GAAGA 7 cut(s) 191, 293, 1064, 1406, 1496, 1666, 1678
MhlI GDGCHC 3 cut(s) 167, 1255, 1491
MluCI AATT 8 cut(s) 243, 319, 759, 1149, 1197, 1307, 1385, 1440
MlyI GAGTC 5 cut(s) 52, 392, 650, 860, 1471
MmeI TCCRAC 2 cut(s) 42, 978
MseI TTAA 5 cut(s) 561, 1083, 1122, 1521, 1671
MslI CAYNNNNRTG 2 cut(s) 140, 1321
MspA1I CMGCKG 1 cut(s) 121
MspI CCGG 2 cut(s) 239, 646
MspR9I CCNGG 4 cut(s) 11, 239, 409, 646
MvaI CCWGG 2 cut(s) 11, 409
MvnI CGCG 4 cut(s) 98, 121, 295, 460
NciI CCSGG 2 cut(s) 239, 646
NdeII GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
NlaIII CATG 6 cut(s) 419, 473, 491, 899, 1336, 1366
NlaIV GGNNCC 4 cut(s) 413, 526, 607, 1517
NmeAIII GCCGAG 1 cut(s) 526
NmuCI GTSAC 6 cut(s) 65, 202, 483, 871, 1314, 1536
NspI RCATGY 2 cut(s) 491, 1366
OliI CACNNNNGTG 2 cut(s) 140, 1321
PaeR7I CTCGAG 1 cut(s) 31
PagI TCATGA 2 cut(s) 895, 1332
PciI ACATGT 1 cut(s) 487
PciSI GCTCTTC 1 cut(s) 1479
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 5 cut(s) 14, 53, 208, 306, 325
PflFI GACNNNGTC 1 cut(s) 869
PkrI GCNGC 9 cut(s) 29, 97, 286, 337, 406, 599, 886, 1072, 1160
PleI GAGTC 5 cut(s) 52, 392, 649, 860, 1471
PmaCI CACGTG 2 cut(s) 162, 187
PmlI CACGTG 2 cut(s) 162, 187
PpsI GAGTC 5 cut(s) 52, 392, 649, 860, 1471
Ppu21I YACGTR 3 cut(s) 162, 187, 770
PpuMI RGGWCCY 2 cut(s) 7, 1516
PscI ACATGT 1 cut(s) 487
PshBI ATTAAT 1 cut(s) 1122
Psp124BI GAGCTC 1 cut(s) 1491
Psp5II RGGWCCY 2 cut(s) 7, 1516
Psp6I CCWGG 2 cut(s) 9, 407
PspCI CACGTG 2 cut(s) 162, 187
PspGI CCWGG 2 cut(s) 9, 407
PspN4I GGNNCC 4 cut(s) 413, 526, 607, 1517
PspPI GGNCC 6 cut(s) 7, 411, 605, 679, 1516, 1598
PspPPI RGGWCCY 2 cut(s) 7, 1516
PspXI VCTCGAGB 1 cut(s) 31
PstI CTGCAG 1 cut(s) 1027
PsyI GACNNNGTC 1 cut(s) 869
RsaI GTAC 4 cut(s) 219, 431, 1246, 1342
RsaNI GTAC 4 cut(s) 218, 430, 1245, 1341
RseI CAYNNNNRTG 2 cut(s) 140, 1321
SacI GAGCTC 1 cut(s) 1491
SacII CCGCGG 1 cut(s) 122
SapI GCTCTTC 1 cut(s) 1479
SaqAI TTAA 5 cut(s) 561, 1083, 1122, 1521, 1671
SatI GCNGC 9 cut(s) 28, 96, 285, 336, 405, 598, 885, 1071, 1159
Sau3AI GATC 9 cut(s) 181, 189, 844, 892, 972, 1027, 1036, 1140, 1588
Sau96I GGNCC 6 cut(s) 7, 411, 605, 679, 1516, 1598
SchI GAGTC 5 cut(s) 52, 392, 650, 860, 1471
ScrFI CCNGG 4 cut(s) 11, 239, 409, 646
SduI GDGCHC 3 cut(s) 167, 1255, 1491
SfaNI GCATC 7 cut(s) 30, 145, 471, 675, 985, 1096, 1113
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 31
Sfr303I CCGCGG 1 cut(s) 122
SgrBI CCGCGG 1 cut(s) 122
SinI GGWCC 5 cut(s) 7, 411, 679, 1516, 1598
SlaI CTCGAG 1 cut(s) 31
SmiMI CAYNNNNRTG 2 cut(s) 140, 1321
SmlI CTYRAG 2 cut(s) 31, 1479
SmoI CTYRAG 2 cut(s) 31, 1479
Sse9I AATT 8 cut(s) 243, 319, 759, 1149, 1197, 1307, 1385, 1440
SspMI CTAG 2 cut(s) 1232, 1418
SstI GAGCTC 1 cut(s) 1491
StyD4I CCNGG 4 cut(s) 9, 237, 407, 644
TaaI ACNGT 7 cut(s) 110, 376, 943, 1195, 1244, 1274, 1630
TaiI ACGT 4 cut(s) 164, 189, 772, 825
TasI AATT 8 cut(s) 243, 319, 759, 1149, 1197, 1307, 1385, 1440
TauI GCSGC 5 cut(s) 98, 287, 338, 600, 887
TfiI GAWTC 5 cut(s) 14, 53, 208, 306, 325
Tru1I TTAA 5 cut(s) 561, 1083, 1122, 1521, 1671
Tru9I TTAA 5 cut(s) 561, 1083, 1122, 1521, 1671
TscAI CASTG 2 cut(s) 616, 1350
TseFI GTSAC 6 cut(s) 65, 202, 483, 871, 1314, 1536
TseI GCWGC 4 cut(s) 27, 404, 1070, 1158
Tsp45I GTSAC 6 cut(s) 65, 202, 483, 871, 1314, 1536
TspDTI ATGAA 6 cut(s) 639, 680, 1085, 1125, 1321, 1395
TspGWI ACGGA 2 cut(s) 205, 1573
TspRI CASTG 2 cut(s) 616, 1350
Tth111I GACNNNGTC 1 cut(s) 869
VpaK11BI GGWCC 5 cut(s) 7, 411, 679, 1516, 1598
VspI ATTAAT 1 cut(s) 1122
XapI RAATTY 1 cut(s) 243
XceI RCATGY 2 cut(s) 491, 1366
XcmI CCANNNNNNNNNTGG 2 cut(s) 736, 1608
XhoI CTCGAG 1 cut(s) 31
XspI CTAG 2 cut(s) 1232, 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.