Rroxscaffold_2G00146670

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000835
Physical Location & Seq
Forward (+)
84518745 .. 84521725
2981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00146670.1

Sequence Viewer

Length: 1752 bp
ATGGAAACCCTAAACCCCACCACCAGCACCACCGTGGACGACGCCGCGGCGAACATCGGCTTCTCAATCCTGATGCGCTTCTCTGACAGCCGTCGCGAAATCGACCTCGAAATCCGCAAGCTCATAACCGTCATGTGCCAGGTATTCCGAGACCACAAGGCTCCTCCGACGCCGCTGGCCTACTTGGGCGCCACGTGCTCCTCCCTCGACCTGATCGCCGCTTCGAAGCCCCGACCTTCCGATGACGTGCTCCACGCCCACATCACAATTCTGTCCATCGTCATCCCCAAAGTCCCGCAGGGATTTCTCATCAACAATCTCCAGTTGGTCTGCAATTCCTTAGCCCCAGCTCTCCGTTCTTCATCTCCAAGTGCAAGCTTCGACTGTGCCGCCTGCACAGGAGTTAAATACATAGCTCAGTTGCTCATTAGCAGCGCTAACTGCGTCAACAACTGGTCACAAGTTTCGAAACCCTTCAGGTCCTTGTTCAGCTTCGCTTATGTCGTCTTCAGCATCGAGGTAAGAGAACAAGCAGGTTTGTGTGTTCACGACACACTGCAAAGTTTTCGAGGAACTCCCCTGTTTGGCCCTGCAAGTAAAACCATTACTGACTTGTTAATGAAAAAGTATCTTCCGCCACGTGCGGAATCAAATACTGATGGAGTTAATAGAATCAACCAACTCAAGGCCATGTATACTTTGAATCTTGTGATGCTATGCCTTGGCGCTATGTCAACCGAGGACAGAACTGCTGTGCTCGTCTACTTTAAGGATCTCTTAGAACTGCACCATACCTATGTTACAAGACTCATCACAGATGCTCTGTACAGACTCTGCCTCATTCCATCATCACCAGATGTTGACCTTGAATTGTTGCTCGATCTAATATGCTCAATATGTCTTTCTGTCTCCCAACACAAGATGAATTTCATCATGAAAACTATAGCTGGTTTGCTCAATTTTGGAGTGCCTAAAGTCTATTCCCTGAACAAGGAAATCTGCAAAATTAAACTCCCTATTATGTTTGATGCACTCATTGTTTTACTCGAACAGTCTGACTTAAGGAACGTCCAAGATGCAGCAAACGCTCTTATGCGTCTTGTTGCTTATATTGATGAAGGCATGATTAAACAGGGAGTTGACCGTGCTCTGTTGAATTCAAATATGGATGATGGAAGCCAGTCTGAGCCAACTCTAATTGAAAAATTGTGTGCTACTTTTCCAAAGTTGCTTTCTTATCGCTGCACTAATATCTGGCACCTTGTTTTTGAAATAGTCTCAACAATGTTCAATAAATTAGGAGTACACTCTTCTTATTTGATGAGGGGTACAGTCAAGACCTTGGCAGACATGCAGATTTTGCCTGATAGAGAATTCCCTTTCAAGGAAGAGGTTAAGCTTCTTCTAGAAATGGTTAGTGAGAAATTTGGGCTTGATGCTATTTCAGCCATTATCCCTCAAGAACACATGGAACTGCTTGCAGAGATCAATCAACAACTGGGTTCTAAATCTGTGGATGCGAGTTCTCATGTATACAAAGCAACTACATCTGGGAATAACTTATCTCAGTCCAATTATATGGACAATTATCGTCGATACTACAATATGAAACGGAAATTGGCTGGTAAAGAGAGTTTGTCTGATCGCCAGTGGAGAGCAGTTTTGGATAGGCAGGCTAGGAGAGATGCCAAGCAGGCTATCAGTAAAGGGATATTAGGTGCAGCCAGGATGGCAAAGAAGCTTAAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

583

Amino Acids

65.1

Weight (kDa)

8.69

Isoelectric Point (pI)

41.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 9 - 283 4.8e-53 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 358 - 487 1e-14 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 524
AccB1I GGYRCC 2 cut(s) 188, 1257
AccI GTMKAC 3 cut(s) 695, 762, 1533
AccII CGCG 2 cut(s) 47, 96
AciI CCGC 9 cut(s) 45, 47, 115, 173, 219, 296, 390, 635, 644
AclWI GGATC 1 cut(s) 780
AcsI RAATTY 4 cut(s) 925, 1156, 1373, 1424
AcuI CTGAAG 2 cut(s) 460, 493
AcvI CACGTG 2 cut(s) 195, 641
AcyI GRCGYC 3 cut(s) 42, 170, 189
AfaI GTAC 3 cut(s) 827, 1305, 1330
AfeI AGCGCT 1 cut(s) 436
AfiI CCNNNNNNNGG 4 cut(s) 584, 685, 991, 1384
AflII CTTAAG 1 cut(s) 1060
AgsI TTSAA 8 cut(s) 703, 869, 1156, 1161, 1202, 1271, 1291, 1384
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 2 cut(s) 138, 1724
AjuI GAANNNNNNNTTGG 4 cut(s) 1216, 1248, 1601, 1633
AleI CACNNNNGTG 1 cut(s) 32
AluBI AGCT 8 cut(s) 121, 350, 378, 416, 492, 947, 1399, 1741
AluI AGCT 8 cut(s) 121, 350, 378, 416, 492, 947, 1399, 1741
Alw21I GWGCWC 4 cut(s) 200, 252, 759, 1150
Alw26I GTCTC 3 cut(s) 144, 913, 1282
AlwI GGATC 1 cut(s) 780
AlwNI CAGNNNCTG 1 cut(s) 834
Aor51HI AGCGCT 1 cut(s) 436
AoxI GGCC 3 cut(s) 177, 586, 687
ApeKI GCWGC 4 cut(s) 432, 1079, 1242, 1721
ApoI RAATTY 4 cut(s) 925, 1156, 1373, 1424
Asp700I GAANNNNTTC 1 cut(s) 473
AspLEI GCGC 4 cut(s) 78, 191, 437, 728
AspS9I GGNCC 2 cut(s) 480, 587
AsuHPI GGTGA 1 cut(s) 843
AsuII TTCGAA 2 cut(s) 224, 467
AvaII GGWCC 1 cut(s) 480
BanI GGYRCC 2 cut(s) 188, 1257
BbrPI CACGTG 2 cut(s) 195, 641
BbsI GAAGAC 1 cut(s) 499
Bbv12I GWGCWC 4 cut(s) 200, 252, 759, 1150
BbvI GCAGC 4 cut(s) 444, 1091, 1229, 1733
BccI CCATC 5 cut(s) 284, 653, 853, 1166, 1723
BceAI ACGGC 1 cut(s) 75
BcgI CGANNNNNNTGC 2 cut(s) 548, 582
BciT130I CCWGG 2 cut(s) 140, 1726
BcoDI GTCTC 3 cut(s) 144, 913, 1282
BfaI CTAG 2 cut(s) 1406, 1677
BfmI CTRYAG 1 cut(s) 942
BfoI RGCGCY 3 cut(s) 192, 438, 729
BfrI CTTAAG 1 cut(s) 1060
BfuAI ACCTGC 1 cut(s) 524
BglI GCCNNNNNGGC 2 cut(s) 1694, 1730
BisI GCNGC 9 cut(s) 45, 48, 173, 219, 390, 433, 1080, 1243, 1722
BlsI GCNGC 9 cut(s) 46, 49, 174, 220, 391, 434, 1081, 1244, 1723
Bme1390I CCNGG 2 cut(s) 140, 1726
Bme18I GGWCC 1 cut(s) 480
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 2 cut(s) 480, 587
BmiI GGNNCC 3 cut(s) 162, 190, 1259
BmrFI CCNGG 2 cut(s) 140, 1726
BmrI ACTGGG 1 cut(s) 1508
BmsI GCATC 9 cut(s) 63, 522, 702, 808, 1018, 1066, 1426, 1507, 1675
BmuI ACTGGG 1 cut(s) 1508
BoxI GACNNNNGTC 1 cut(s) 90
BpiI GAAGAC 1 cut(s) 499
BpmI CTGGAG 1 cut(s) 305
Bpu10I CCTNAGC 1 cut(s) 340
Bpu14I TTCGAA 2 cut(s) 224, 467
BpuEI CTTGAG 2 cut(s) 668, 1443
BsaAI YACGTR 2 cut(s) 195, 641
BsaHI GRCGYC 3 cut(s) 42, 170, 189
BsaI GGTCTC 1 cut(s) 144
BsaJI CCNNGG 5 cut(s) 33, 45, 721, 738, 1341
Bsc4I CCNNNNNNNGG 4 cut(s) 584, 685, 991, 1384
Bse1I ACTGG 5 cut(s) 322, 458, 1180, 1503, 1648
BseBI CCWGG 2 cut(s) 140, 1726
BseDI CCNNGG 5 cut(s) 33, 45, 721, 738, 1341
BseGI GGATG 4 cut(s) 282, 1174, 1522, 1734
BseLI CCNNNNNNNGG 4 cut(s) 584, 685, 991, 1384
BseMII CTCAG 3 cut(s) 431, 1176, 1580
BseNI ACTGG 5 cut(s) 322, 458, 1180, 1503, 1648
BseRI GAGGAG 2 cut(s) 153, 190
BseXI GCAGC 4 cut(s) 444, 1091, 1229, 1733
BseYI CCCAGC 1 cut(s) 346
BsgI GTGCAG 4 cut(s) 379, 770, 1228, 1740
Bsh1236I CGCG 2 cut(s) 47, 96
BshFI GGCC 3 cut(s) 179, 588, 689
BshNI GGYRCC 2 cut(s) 188, 1257
BsiHKAI GWGCWC 4 cut(s) 200, 252, 759, 1150
BslFI GGGAC 1 cut(s) 278
BslI CCNNNNNNNGG 4 cut(s) 584, 685, 991, 1384
BsmAI GTCTC 3 cut(s) 144, 913, 1282
BsmFI GGGAC 1 cut(s) 278
BsnI GGCC 3 cut(s) 179, 588, 689
Bso31I GGTCTC 1 cut(s) 144
Bsp119I TTCGAA 2 cut(s) 224, 467
Bsp1286I GDGCHC 4 cut(s) 200, 252, 759, 1150
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 5 cut(s) 213, 772, 880, 1485, 1642
Bsp68I TCGCGA 1 cut(s) 96
BspACI CCGC 9 cut(s) 45, 47, 115, 173, 219, 296, 390, 635, 644
BspANI GGCC 3 cut(s) 179, 588, 689
BspCNI CTCAG 3 cut(s) 430, 1177, 1579
BspFNI CGCG 2 cut(s) 47, 96
BspHI TCATGA 1 cut(s) 933
BspLI GGNNCC 3 cut(s) 162, 190, 1259
BspMI ACCTGC 1 cut(s) 524
BspPI GGATC 1 cut(s) 780
BspT104I TTCGAA 2 cut(s) 224, 467
BspT107I GGYRCC 2 cut(s) 188, 1257
BspTI CTTAAG 1 cut(s) 1060
BspTNI GGTCTC 1 cut(s) 144
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 5 cut(s) 322, 458, 1180, 1503, 1648
BssECI CCNNGG 5 cut(s) 33, 45, 721, 738, 1341
BssMI GATC 5 cut(s) 213, 772, 880, 1485, 1642
BssNAI GTATAC 2 cut(s) 696, 1534
BssNI GRCGYC 3 cut(s) 42, 170, 189
BssT1I CCWWGG 2 cut(s) 721, 1341
Bst1107I GTATAC 2 cut(s) 696, 1534
Bst2UI CCWGG 2 cut(s) 140, 1726
Bst4CI ACNGT 6 cut(s) 34, 130, 386, 1053, 1145, 1333
Bst6I CTCTTC 2 cut(s) 1315, 1383
BstACI GRCGYC 3 cut(s) 42, 170, 189
BstAFI CTTAAG 1 cut(s) 1060
BstAPI GCANNNNNTGC 1 cut(s) 1360
BstAUI TGTACA 1 cut(s) 825
BstBAI YACGTR 2 cut(s) 195, 641
BstBI TTCGAA 2 cut(s) 224, 467
BstC8I GCNNGC 7 cut(s) 119, 177, 376, 394, 1479, 1674, 1695
BstDEI CTNAG 5 cut(s) 340, 417, 778, 1185, 1566
BstDSI CCRYGG 2 cut(s) 33, 45
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 4 cut(s) 282, 1174, 1522, 1734
BstFNI CGCG 2 cut(s) 47, 96
BstH2I RGCGCY 3 cut(s) 192, 438, 729
BstHHI GCGC 4 cut(s) 78, 191, 437, 728
BstKTI GATC 5 cut(s) 216, 775, 883, 1488, 1645
BstMAI GTCTC 3 cut(s) 144, 913, 1282
BstMBI GATC 5 cut(s) 213, 772, 880, 1485, 1642
BstMWI GCNNNNNNNGC 7 cut(s) 195, 441, 1085, 1360, 1445, 1694, 1730
BstNI CCWGG 2 cut(s) 140, 1726
BstNSI RCATGY 1 cut(s) 1354
BstPAI GACNNNNGTC 1 cut(s) 90
BstSCI CCNGG 2 cut(s) 138, 1724
BstSFI CTRYAG 1 cut(s) 942
BstUI CGCG 2 cut(s) 47, 96
BstV1I GCAGC 4 cut(s) 444, 1091, 1229, 1733
BstV2I GAAGAC 1 cut(s) 499
BstX2I RGATCY 1 cut(s) 772
BstXI CCANNNNNNTGG 1 cut(s) 1579
BstYI RGATCY 1 cut(s) 772
BstZ17I GTATAC 2 cut(s) 696, 1534
BsuRI GGCC 3 cut(s) 179, 588, 689
BtgI CCRYGG 2 cut(s) 33, 45
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 4 cut(s) 282, 1174, 1522, 1734
BtsI GCAGTG 1 cut(s) 554
BtsIMutI CAGTG 2 cut(s) 554, 1655
BtuMI TCGCGA 1 cut(s) 96
BveI ACCTGC 1 cut(s) 524
Cac8I GCNNGC 7 cut(s) 119, 177, 376, 394, 1479, 1674, 1695
CaiI CAGNNNCTG 1 cut(s) 834
CciI TCATGA 1 cut(s) 933
CfoI GCGC 4 cut(s) 78, 191, 437, 728
Cfr13I GGNCC 2 cut(s) 480, 587
Cfr42I CCGCGG 1 cut(s) 48
CseI GACGC 4 cut(s) 50, 178, 433, 1085
Csp6I GTAC 3 cut(s) 826, 1304, 1329
CviAII CATG 7 cut(s) 133, 691, 934, 1123, 1351, 1468, 1529
CviQI GTAC 3 cut(s) 826, 1304, 1329
DdeI CTNAG 5 cut(s) 340, 417, 778, 1185, 1566
DinI GGCGCC 1 cut(s) 190
DpnI GATC 5 cut(s) 215, 774, 882, 1487, 1644
DpnII GATC 5 cut(s) 213, 772, 880, 1485, 1642
Eam1104I CTCTTC 2 cut(s) 1315, 1383
EarI CTCTTC 2 cut(s) 1315, 1383
EciI GGCGGA 1 cut(s) 624
Eco130I CCWWGG 2 cut(s) 721, 1341
Eco31I GGTCTC 1 cut(s) 144
Eco47I GGWCC 1 cut(s) 480
Eco47III AGCGCT 1 cut(s) 436
Eco57I CTGAAG 2 cut(s) 460, 493
Eco72I CACGTG 2 cut(s) 195, 641
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 480
EcoRI GAATTC 2 cut(s) 1156, 1373
EcoRII CCWGG 2 cut(s) 138, 1724
EcoT14I CCWWGG 2 cut(s) 721, 1341
EgeI GGCGCC 1 cut(s) 190
EheI GGCGCC 1 cut(s) 190
ErhI CCWWGG 2 cut(s) 721, 1341
FaeI CATG 7 cut(s) 136, 694, 937, 1126, 1354, 1471, 1532
FalI AAGNNNNNCTT 2 cut(s) 761, 793
FaqI GGGAC 1 cut(s) 278
FatI CATG 7 cut(s) 132, 690, 933, 1122, 1350, 1467, 1528
FauI CCCGC 1 cut(s) 303
FblI GTMKAC 3 cut(s) 695, 762, 1533
Fnu4HI GCNGC 9 cut(s) 45, 48, 173, 219, 390, 433, 1080, 1243, 1722
FokI GGATG 4 cut(s) 269, 1181, 1529, 1741
Fsp4HI GCNGC 9 cut(s) 45, 48, 173, 219, 390, 433, 1080, 1243, 1722
FspBI CTAG 2 cut(s) 1406, 1677
GlaI GCGC 4 cut(s) 77, 190, 436, 727
GluI GCNGC 9 cut(s) 45, 48, 173, 219, 390, 433, 1080, 1243, 1722
GsaI CCCAGC 1 cut(s) 350
GsuI CTGGAG 1 cut(s) 305
HaeII RGCGCY 3 cut(s) 192, 438, 729
HaeIII GGCC 3 cut(s) 179, 588, 689
HgaI GACGC 4 cut(s) 50, 178, 433, 1085
HhaI GCGC 4 cut(s) 78, 191, 437, 728
Hin1I GRCGYC 3 cut(s) 42, 170, 189
Hin1II CATG 7 cut(s) 136, 694, 937, 1126, 1354, 1471, 1532
Hin6I GCGC 4 cut(s) 76, 189, 435, 726
HinP1I GCGC 4 cut(s) 76, 189, 435, 726
HincII GTYRAC 4 cut(s) 448, 735, 862, 1141
HindII GTYRAC 4 cut(s) 448, 735, 862, 1141
HindIII AAGCTT 3 cut(s) 376, 1397, 1739
HinfI GANTC 5 cut(s) 647, 672, 703, 807, 831
HphI GGTGA 1 cut(s) 843
Hpy188I TCNGA 8 cut(s) 85, 149, 168, 241, 1057, 1186, 1642, 1751
Hpy188III TCNNGA 7 cut(s) 70, 95, 548, 934, 1336, 1406, 1460
Hpy99I CGWCG 4 cut(s) 44, 96, 172, 1596
HpyAV CCTTC 3 cut(s) 246, 484, 1112
HpyCH4III ACNGT 6 cut(s) 34, 130, 386, 1053, 1145, 1333
HpyCH4IV ACGT 4 cut(s) 194, 246, 640, 1068
HpyF10VI GCNNNNNNNGC 7 cut(s) 195, 441, 1085, 1360, 1445, 1694, 1730
HpyF3I CTNAG 5 cut(s) 340, 417, 778, 1185, 1566
HpySE526I ACGT 4 cut(s) 194, 246, 640, 1068
Hsp92I GRCGYC 3 cut(s) 42, 170, 189
Hsp92II CATG 7 cut(s) 136, 694, 937, 1126, 1354, 1471, 1532
HspAI GCGC 4 cut(s) 76, 189, 435, 726
KasI GGCGCC 1 cut(s) 188
KspI CCGCGG 1 cut(s) 48
Kzo9I GATC 5 cut(s) 213, 772, 880, 1485, 1642
LmnI GCTCC 3 cut(s) 166, 203, 255
Lsp1109I GCAGC 4 cut(s) 444, 1091, 1229, 1733
LweI GCATC 9 cut(s) 63, 522, 702, 808, 1018, 1066, 1426, 1507, 1675
MaeI CTAG 2 cut(s) 1406, 1677
MaeII ACGT 4 cut(s) 194, 246, 640, 1068
MaeIII GTNAC 2 cut(s) 456, 799
MalI GATC 5 cut(s) 215, 774, 882, 1487, 1644
MboI GATC 5 cut(s) 213, 772, 880, 1485, 1642
MboII GAAGA 6 cut(s) 351, 499, 623, 1302, 1394, 1400
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 4 cut(s) 200, 252, 759, 1150
Mly113I GGCGCC 1 cut(s) 189
MlyI GAGTC 2 cut(s) 801, 825
MmeI TCCRAC 1 cut(s) 191
MroXI GAANNNNTTC 1 cut(s) 473
MseI TTAA 9 cut(s) 405, 617, 666, 768, 1008, 1061, 1128, 1395, 1743
MslI CAYNNNNRTG 2 cut(s) 32, 795
MspA1I CMGCKG 2 cut(s) 47, 175
MspCI CTTAAG 1 cut(s) 1060
MspR9I CCNGG 2 cut(s) 140, 1726
MvaI CCWGG 2 cut(s) 140, 1726
MvnI CGCG 2 cut(s) 47, 96
MwoI GCNNNNNNNGC 7 cut(s) 195, 441, 1085, 1360, 1445, 1694, 1730
NarI GGCGCC 1 cut(s) 189
NdeII GATC 5 cut(s) 213, 772, 880, 1485, 1642
NlaIII CATG 7 cut(s) 136, 694, 937, 1126, 1354, 1471, 1532
NlaIV GGNNCC 3 cut(s) 162, 190, 1259
NmuCI GTSAC 1 cut(s) 456
NruI TCGCGA 1 cut(s) 96
NspI RCATGY 1 cut(s) 1354
NspV TTCGAA 2 cut(s) 224, 467
OliI CACNNNNGTG 1 cut(s) 32
PagI TCATGA 1 cut(s) 933
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PdmI GAANNNNTTC 1 cut(s) 473
PfeI GAWTC 3 cut(s) 647, 672, 703
PkrI GCNGC 9 cut(s) 46, 49, 174, 220, 391, 434, 1081, 1244, 1723
PleI GAGTC 2 cut(s) 801, 825
PluTI GGCGCC 1 cut(s) 192
PmaCI CACGTG 2 cut(s) 195, 641
PmlI CACGTG 2 cut(s) 195, 641
PpsI GAGTC 2 cut(s) 801, 825
Ppu21I YACGTR 2 cut(s) 195, 641
PpuMI RGGWCCY 1 cut(s) 480
PshAI GACNNNNGTC 1 cut(s) 90
Psp5II RGGWCCY 1 cut(s) 480
Psp6I CCWGG 2 cut(s) 138, 1724
PspCI CACGTG 2 cut(s) 195, 641
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 2 cut(s) 138, 1724
PspN4I GGNNCC 3 cut(s) 162, 190, 1259
PspPI GGNCC 2 cut(s) 480, 587
PspPPI RGGWCCY 1 cut(s) 480
PstNI CAGNNNCTG 1 cut(s) 834
PsuI RGATCY 1 cut(s) 772
RruI TCGCGA 1 cut(s) 96
RsaI GTAC 3 cut(s) 827, 1305, 1330
RsaNI GTAC 3 cut(s) 826, 1304, 1329
RseI CAYNNNNRTG 2 cut(s) 32, 795
SacII CCGCGG 1 cut(s) 48
SaqAI TTAA 9 cut(s) 405, 617, 666, 768, 1008, 1061, 1128, 1395, 1743
SatI GCNGC 9 cut(s) 45, 48, 173, 219, 390, 433, 1080, 1243, 1722
Sau3AI GATC 5 cut(s) 213, 772, 880, 1485, 1642
Sau96I GGNCC 2 cut(s) 480, 587
SchI GAGTC 2 cut(s) 801, 825
ScrFI CCNGG 2 cut(s) 140, 1726
SduI GDGCHC 4 cut(s) 200, 252, 759, 1150
SfaNI GCATC 9 cut(s) 63, 522, 702, 808, 1018, 1066, 1426, 1507, 1675
SfcI CTRYAG 1 cut(s) 942
SfoI GGCGCC 1 cut(s) 190
Sfr303I CCGCGG 1 cut(s) 48
SfuI TTCGAA 2 cut(s) 224, 467
SgrBI CCGCGG 1 cut(s) 48
SinI GGWCC 1 cut(s) 480
SmiMI CAYNNNNRTG 2 cut(s) 32, 795
SmlI CTYRAG 3 cut(s) 683, 1060, 1458
SmoI CTYRAG 3 cut(s) 683, 1060, 1458
SsiI CCGC 9 cut(s) 45, 47, 115, 173, 219, 296, 390, 635, 644
SspDI GGCGCC 1 cut(s) 188
SspMI CTAG 2 cut(s) 1406, 1677
StyD4I CCNGG 2 cut(s) 138, 1724
StyI CCWWGG 2 cut(s) 721, 1341
TaaI ACNGT 6 cut(s) 34, 130, 386, 1053, 1145, 1333
TaiI ACGT 4 cut(s) 197, 249, 643, 1071
TatI WGTACW 2 cut(s) 825, 1303
TauI GCSGC 5 cut(s) 47, 50, 175, 221, 392
TfiI GAWTC 3 cut(s) 647, 672, 703
Tru1I TTAA 9 cut(s) 405, 617, 666, 768, 1008, 1061, 1128, 1395, 1743
Tru9I TTAA 9 cut(s) 405, 617, 666, 768, 1008, 1061, 1128, 1395, 1743
TscAI CASTG 2 cut(s) 561, 1655
TseFI GTSAC 1 cut(s) 456
TseI GCWGC 4 cut(s) 432, 1079, 1242, 1721
Tsp45I GTSAC 1 cut(s) 456
TspDTI ATGAA 7 cut(s) 351, 635, 919, 938, 950, 1131, 1622
TspGWI ACGGA 2 cut(s) 344, 1627
TspRI CASTG 2 cut(s) 561, 1655
Vha464I CTTAAG 1 cut(s) 1060
VpaK11BI GGWCC 1 cut(s) 480
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 4 cut(s) 925, 1156, 1373, 1424
XbaI TCTAGA 1 cut(s) 1405
XceI RCATGY 1 cut(s) 1354
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XmiI GTMKAC 3 cut(s) 695, 762, 1533
XmnI GAANNNNTTC 1 cut(s) 473
XspI CTAG 2 cut(s) 1406, 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.