Rroxscaffold_2G00146740

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000835
Physical Location & Seq
Reverse (-)
84628842 .. 84632291
3450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00146740.1

Sequence Viewer

Length: 1728 bp
ATGGAAACCCTAACCGTCGTAGACGCCGCCAACATCGGCGCCTCAATTCTCATGCGCTTCACCGACTCCAACCGCGAACTCGACCTCGAAATCCGCAAACTCATCGTCGTCATGTCCAGGGTATTCCGAGACCACAAGGCACCTCCGACGCCGGTGGGCTACTTGGGCGCCACGTGCACCTCTCTCGACATCGCCACCGCCTCCATGCCCCAAGCTTCCGGTCACGTGCTCGACGCCCACCTCACGATTCTGTCCATCGTCATCCCAAAAGTCCCTGCTGCGTTTCTGATCAAGAATCTATGGCCGCTGTTTAATTCTATAGCACGACCTCTCCGGTCTTCGTCTCTGATTGACGAGAGTACCGGCTGCTTAGTAGTGAAATGCATAGCTGAATTCATCATTGCCGTCGCAAAAGTCGTCAACAATTGGTCAGATGTTTCAGAACTGTACAGCTTCTTACTCAGCTTGGCTACCATTAAAGCCCTCGAGATTCCGACACAGGTGAGAACGCAATTATGTTTGTGTCTTCCTGATGTACTGCAAAGATTTCAAGGAACACCGCTGTTTGACCCTGCAATAAAAAAGATTACCGACTTGTTGAATAAGTATCCTCCACTAGGGAACCATGATGTAAAGGCTAGTGCATCTGTTCTCTCCCAAAAAGAGAAGGCCTGGTTTACTTTGGATGTTGTGAAAGTATCTCTTTGCCTTATGTCAACCGAGGACAGAACTGCCGTGCTCATCTACTTTAAATCTCTCTTGGAACTGAACCAATTCCCTGTTACAGCACGGATAGTTGATGGTTTGTATGGACTTTGTCTCGACCCATCTGCTGATGTTTCTCCTGAACTGTTGCTAGATTTAATACGCTCAATCTGTCTTTCTGTCACCCAACATAAGATGATGTACATCCCAGAAACTGCAGCTGGTTTGCTCAGTATTGGAGTGGCGAAAGTCTATTCCTTTAACCAGAAAATCTGCGAAACTAATCTCCCTATTGTGTTTGATGCACTCAAAGTTATATTGGGAGAGCCTAAAATAGACGACCTTCCTGATGCAGTGCATGCATTTAAGTGTCTAATTCATGCTTGTATTGATGAAAGCTTGATCAAAGAGGGAGTTGACTGTGTGGTGATGAATGCAAGTATGGATGATGGAAGCAAGTCTGAGCCAACTATAATTGAAAATTTGTGTGCTACTATTCACAGCCTACTTGGTCATCGCAAAACTACTATCTGGCCCCTTGCTTTTGAAGTTGTTTCAACAATGTTCGATAAATTAGGGGCATACTCTTCTTATTTGATGAGGGGTACACTCAAGACCTTGGCAGACATGCAGAAATTGCCTGATCAAGAATTTTCTTTCAAGGAAGAGGTTAAGCTTCTTCTAAAAATGCTTGTTGAGAAATGTGGGCTTGATGCTATAATGGCCGTCATGCCTCAAGAACACAAGAAACTGCTTCTAGAGATCAATGAAATGGGTTATAAATCTGTGGAAGTGATATCTCATGCTTCGGAAGCAACTGCAGTCAGGTATCACCTTTCTCAGTCCGAAAGTAGTGACAATCAAATGCATGATAAAGCACTTGGACCATGCAAGAATTCAAAACGGAAAATGGATGGTGGAGGTAATGAGTTTTGTGATCGGCATGCCAGGAGTATTGCTAAGAGGGAAATGACAAAAAGGATGTCAGGTGCAGCTCTGATGGCGAAGAAGCTAAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

575

Amino Acids

63.49

Weight (kDa)

6.71

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 7 - 280 4.7e-51 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 353 - 483 2.9e-18 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1485
AccB1I GGYRCC 3 cut(s) 38, 139, 167
AccI GTMKAC 1 cut(s) 21
AccII CGCG 1 cut(s) 75
AciI CCGC 6 cut(s) 27, 73, 94, 198, 305, 560
AcoI YGGCCR 2 cut(s) 302, 1428
AcsI RAATTY 4 cut(s) 392, 1186, 1355, 1600
AcvI CACGTG 2 cut(s) 174, 226
AcyI GRCGYC 5 cut(s) 24, 39, 149, 168, 234
AfaI GTAC 5 cut(s) 361, 449, 537, 908, 1312
AfiI CCNNNNNNNGG 1 cut(s) 617
AgsI TTSAA 7 cut(s) 551, 601, 1184, 1253, 1263, 1366, 1605
AjnI CCWGG 3 cut(s) 116, 671, 1652
AluBI AGCT 9 cut(s) 215, 389, 453, 465, 926, 1104, 1381, 1700, 1717
AluI AGCT 9 cut(s) 215, 389, 453, 465, 926, 1104, 1381, 1700, 1717
Alw21I GWGCWC 3 cut(s) 179, 231, 741
Alw26I GTCTC 3 cut(s) 123, 348, 824
Alw44I GTGCAC 1 cut(s) 175
AlwNI CAGNNNCTG 1 cut(s) 920
Ama87I CYCGRG 1 cut(s) 485
AoxI GGCC 4 cut(s) 302, 669, 1238, 1428
ApaLI GTGCAC 1 cut(s) 175
ApeKI GCWGC 4 cut(s) 278, 366, 923, 1697
ApoI RAATTY 4 cut(s) 392, 1186, 1355, 1600
ArsI GACNNNNNNTTYG 4 cut(s) 90, 122, 1673, 1705
Asp700I GAANNNNTTC 1 cut(s) 773
AspLEI GCGC 3 cut(s) 41, 57, 170
AspS9I GGNCC 2 cut(s) 1239, 1589
AsuHPI GGTGA 5 cut(s) 52, 514, 880, 1144, 1529
AvaI CYCGRG 1 cut(s) 485
AvaII GGWCC 1 cut(s) 1589
BaeGI GKGCMC 1 cut(s) 179
BaeI ACNNNNGTAYC 2 cut(s) 343, 376
BanI GGYRCC 3 cut(s) 38, 139, 167
BbrPI CACGTG 2 cut(s) 174, 226
BbsI GAAGAC 2 cut(s) 330, 518
Bbv12I GWGCWC 3 cut(s) 179, 231, 741
BbvI GCAGC 4 cut(s) 265, 353, 935, 1709
BccI CCATC 6 cut(s) 263, 794, 835, 1148, 1613, 1699
BceAI ACGGC 3 cut(s) 389, 719, 1415
BcgI CGANNNNNNTGC 6 cut(s) 85, 119, 166, 200, 812, 846
BciT130I CCWGG 3 cut(s) 118, 673, 1654
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 3 cut(s) 288, 1107, 1348
BcoDI GTCTC 3 cut(s) 123, 348, 824
BfaI CTAG 5 cut(s) 617, 639, 857, 1463, 1726
BfmI CTRYAG 3 cut(s) 318, 921, 1524
BfoI RGCGCY 2 cut(s) 42, 171
BfuI GTATCC 1 cut(s) 618
BisI GCNGC 6 cut(s) 27, 279, 305, 367, 924, 1698
BlsI GCNGC 6 cut(s) 28, 280, 306, 368, 925, 1699
Bme1390I CCNGG 3 cut(s) 118, 673, 1654
Bme18I GGWCC 1 cut(s) 1589
BmeT110I CYCGRG 1 cut(s) 485
BmgT120I GGNCC 2 cut(s) 1239, 1589
BmiI GGNNCC 5 cut(s) 40, 141, 169, 623, 1241
BmrFI CCNGG 3 cut(s) 118, 673, 1654
BmsI GCATC 4 cut(s) 653, 997, 1045, 1408
BpiI GAAGAC 2 cut(s) 330, 518
BpuEI CTTGAG 2 cut(s) 1301, 1425
BsaAI YACGTR 2 cut(s) 174, 226
BsaBI GATNNNNATC 1 cut(s) 908
BsaHI GRCGYC 5 cut(s) 24, 39, 149, 168, 234
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 3 cut(s) 117, 720, 1323
BsaWI WCCGGW 2 cut(s) 218, 333
BsaXI ACNNNNNCTCC 2 cut(s) 315, 345
Bsc4I CCNNNNNNNGG 1 cut(s) 617
Bse118I RCCGGY 2 cut(s) 151, 362
Bse3DI GCAATG 1 cut(s) 399
Bse8I GATNNNNATC 1 cut(s) 908
BseBI CCWGG 3 cut(s) 118, 673, 1654
BseDI CCNNGG 3 cut(s) 117, 720, 1323
BseGI GGATG 6 cut(s) 261, 691, 909, 1156, 1624, 1692
BseJI GATNNNNATC 1 cut(s) 908
BseLI CCNNNNNNNGG 1 cut(s) 617
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 4 cut(s) 475, 949, 1158, 1559
BseSI GKGCMC 1 cut(s) 179
BseXI GCAGC 4 cut(s) 265, 353, 935, 1709
BsgI GTGCAG 1 cut(s) 1716
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 4 cut(s) 304, 671, 1240, 1430
BshNI GGYRCC 3 cut(s) 38, 139, 167
BsiHKAI GWGCWC 3 cut(s) 179, 231, 741
BsiHKCI CYCGRG 1 cut(s) 485
BsiSI CCGG 4 cut(s) 152, 219, 334, 363
BslFI GGGAC 1 cut(s) 257
BslI CCNNNNNNNGG 1 cut(s) 617
BsmAI GTCTC 3 cut(s) 123, 348, 824
BsmBI CGTCTC 1 cut(s) 348
BsmFI GGGAC 1 cut(s) 257
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 4 cut(s) 304, 671, 1240, 1430
Bso31I GGTCTC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 485
Bsp1286I GDGCHC 3 cut(s) 179, 231, 741
Bsp1407I TGTACA 2 cut(s) 447, 906
Bsp143I GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
BspACI CCGC 6 cut(s) 27, 73, 94, 198, 305, 560
BspANI GGCC 4 cut(s) 304, 671, 1240, 1430
BspCNI CTCAG 4 cut(s) 474, 948, 1159, 1558
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 5 cut(s) 40, 141, 169, 623, 1241
BspMAI CTGCAG 2 cut(s) 925, 1528
BspT107I GGYRCC 3 cut(s) 38, 139, 167
BspTNI GGTCTC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 2 cut(s) 151, 362
BsrGI TGTACA 2 cut(s) 447, 906
BssAI RCCGGY 2 cut(s) 151, 362
BssECI CCNNGG 3 cut(s) 117, 720, 1323
BssMI GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
BssNI GRCGYC 5 cut(s) 24, 39, 149, 168, 234
BssT1I CCWWGG 1 cut(s) 1323
Bst2UI CCWGG 3 cut(s) 118, 673, 1654
Bst4CI ACNGT 4 cut(s) 16, 447, 852, 1127
Bst6I CTCTTC 2 cut(s) 1297, 1365
BstACI GRCGYC 5 cut(s) 24, 39, 149, 168, 234
BstAPI GCANNNNNTGC 2 cut(s) 1064, 1342
BstAUI TGTACA 2 cut(s) 447, 906
BstBAI YACGTR 2 cut(s) 174, 226
BstC8I GCNNGC 2 cut(s) 1065, 1650
BstDEI CTNAG 6 cut(s) 370, 461, 935, 1167, 1545, 1665
BstENI CCTNNNNNAGG 1 cut(s) 615
BstF5I GGATG 6 cut(s) 261, 691, 909, 1156, 1624, 1692
BstFNI CGCG 1 cut(s) 75
BstH2I RGCGCY 2 cut(s) 42, 171
BstHHI GCGC 3 cut(s) 41, 57, 170
BstKTI GATC 5 cut(s) 291, 1110, 1351, 1470, 1645
BstMAI GTCTC 3 cut(s) 123, 348, 824
BstMBI GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
BstMWI GCNNNNNNNGC 7 cut(s) 165, 174, 1064, 1342, 1427, 1517, 1706
BstNI CCWGG 3 cut(s) 118, 673, 1654
BstNSI RCATGY 3 cut(s) 1067, 1336, 1652
BstSCI CCNGG 3 cut(s) 116, 671, 1652
BstSFI CTRYAG 3 cut(s) 318, 921, 1524
BstSLI GKGCMC 1 cut(s) 179
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 4 cut(s) 265, 353, 935, 1709
BstV2I GAAGAC 2 cut(s) 330, 518
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 4 cut(s) 304, 671, 1240, 1430
BtgZI GCGATG 2 cut(s) 175, 1205
BtsCI GGATG 6 cut(s) 261, 691, 909, 1156, 1624, 1692
BtsI GCAGTG 1 cut(s) 1065
BtsIMutI CAGTG 1 cut(s) 1065
Cac8I GCNNGC 2 cut(s) 1065, 1650
CaiI CAGNNNCTG 1 cut(s) 920
CfoI GCGC 3 cut(s) 41, 57, 170
Cfr10I RCCGGY 2 cut(s) 151, 362
Cfr13I GGNCC 2 cut(s) 1239, 1589
CseI GACGC 3 cut(s) 32, 157, 242
Csp6I GTAC 5 cut(s) 360, 448, 536, 907, 1311
CviQI GTAC 5 cut(s) 360, 448, 536, 907, 1311
DdeI CTNAG 6 cut(s) 370, 461, 935, 1167, 1545, 1665
DinI GGCGCC 2 cut(s) 40, 169
DpnI GATC 5 cut(s) 290, 1109, 1350, 1469, 1644
DpnII GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
DraI TTTAAA 1 cut(s) 751
EaeI YGGCCR 2 cut(s) 302, 1428
Eam1104I CTCTTC 2 cut(s) 1297, 1365
EarI CTCTTC 2 cut(s) 1297, 1365
Eco130I CCWWGG 1 cut(s) 1323
Eco147I AGGCCT 1 cut(s) 671
Eco31I GGTCTC 1 cut(s) 123
Eco32I GATATC 1 cut(s) 1503
Eco47I GGWCC 1 cut(s) 1589
Eco72I CACGTG 2 cut(s) 174, 226
Eco88I CYCGRG 1 cut(s) 485
EcoNI CCTNNNNNAGG 1 cut(s) 615
EcoRI GAATTC 2 cut(s) 392, 1600
EcoRII CCWGG 3 cut(s) 116, 671, 1652
EcoRV GATATC 1 cut(s) 1503
EcoT14I CCWWGG 1 cut(s) 1323
EcoT22I ATGCAT 3 cut(s) 386, 1069, 1575
EgeI GGCGCC 2 cut(s) 40, 169
EheI GGCGCC 2 cut(s) 40, 169
ErhI CCWWGG 1 cut(s) 1323
Esp3I CGTCTC 1 cut(s) 348
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FaqI GGGAC 1 cut(s) 257
FbaI TGATCA 3 cut(s) 288, 1107, 1348
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 6 cut(s) 27, 279, 305, 367, 924, 1698
FokI GGATG 6 cut(s) 248, 698, 896, 1163, 1631, 1699
Fsp4HI GCNGC 6 cut(s) 27, 279, 305, 367, 924, 1698
FspBI CTAG 5 cut(s) 617, 639, 857, 1463, 1726
GlaI GCGC 3 cut(s) 40, 56, 169
GluI GCNGC 6 cut(s) 27, 279, 305, 367, 924, 1698
HaeII RGCGCY 2 cut(s) 42, 171
HaeIII GGCC 4 cut(s) 304, 671, 1240, 1430
HapII CCGG 4 cut(s) 152, 219, 334, 363
HgaI GACGC 3 cut(s) 32, 157, 242
HhaI GCGC 3 cut(s) 41, 57, 170
Hin1I GRCGYC 5 cut(s) 24, 39, 149, 168, 234
Hin6I GCGC 3 cut(s) 39, 55, 168
HinP1I GCGC 3 cut(s) 39, 55, 168
HincII GTYRAC 3 cut(s) 421, 717, 1123
HindII GTYRAC 3 cut(s) 421, 717, 1123
HindIII AAGCTT 3 cut(s) 213, 1102, 1379
HinfI GANTC 4 cut(s) 65, 247, 295, 490
HpaII CCGG 4 cut(s) 152, 219, 334, 363
HphI GGTGA 5 cut(s) 52, 514, 880, 1144, 1529
Hpy166II GTNNAC 7 cut(s) 22, 177, 421, 678, 717, 1123, 1313
Hpy8I GTNNAC 7 cut(s) 22, 177, 421, 678, 717, 1123, 1313
Hpy99I CGWCG 5 cut(s) 20, 110, 151, 236, 410
HpyAV CCTTC 2 cut(s) 661, 1058
HpyCH4III ACNGT 4 cut(s) 16, 447, 852, 1127
HpyCH4IV ACGT 2 cut(s) 173, 225
HpyF10VI GCNNNNNNNGC 7 cut(s) 165, 174, 1064, 1342, 1427, 1517, 1706
HpyF3I CTNAG 6 cut(s) 370, 461, 935, 1167, 1545, 1665
HpySE526I ACGT 2 cut(s) 173, 225
Hsp92I GRCGYC 5 cut(s) 24, 39, 149, 168, 234
HspAI GCGC 3 cut(s) 39, 55, 168
KasI GGCGCC 2 cut(s) 38, 167
Ksp22I TGATCA 3 cut(s) 288, 1107, 1348
Kzo9I GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
Lsp1109I GCAGC 4 cut(s) 265, 353, 935, 1709
LweI GCATC 4 cut(s) 653, 997, 1045, 1408
MaeI CTAG 5 cut(s) 617, 639, 857, 1463, 1726
MaeII ACGT 2 cut(s) 173, 225
MaeIII GTNAC 4 cut(s) 221, 781, 886, 1559
MalI GATC 5 cut(s) 290, 1109, 1350, 1469, 1644
MboI GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
MboII GAAGA 6 cut(s) 330, 518, 1284, 1376, 1382, 1723
MfeI CAATTG 1 cut(s) 424
MhlI GDGCHC 3 cut(s) 179, 231, 741
Mly113I GGCGCC 2 cut(s) 39, 168
MlyI GAGTC 1 cut(s) 59
MmeI TCCRAC 3 cut(s) 93, 170, 518
Mph1103I ATGCAT 3 cut(s) 386, 1069, 1575
MroXI GAANNNNTTC 1 cut(s) 773
MseI TTAA 7 cut(s) 312, 477, 750, 863, 966, 1071, 1377
MslI CAYNNNNRTG 1 cut(s) 1072
MspA1I CMGCKG 3 cut(s) 307, 562, 926
MspI CCGG 4 cut(s) 152, 219, 334, 363
MspR9I CCNGG 3 cut(s) 118, 673, 1654
MunI CAATTG 1 cut(s) 424
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 3 cut(s) 118, 673, 1654
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 7 cut(s) 165, 174, 1064, 1342, 1427, 1517, 1706
NarI GGCGCC 2 cut(s) 39, 168
NdeII GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
NlaIV GGNNCC 5 cut(s) 40, 141, 169, 623, 1241
NmuCI GTSAC 3 cut(s) 221, 886, 1559
NsiI ATGCAT 3 cut(s) 386, 1069, 1575
NspI RCATGY 3 cut(s) 1067, 1336, 1652
PaeI GCATGC 2 cut(s) 1067, 1652
PaeR7I CTCGAG 1 cut(s) 485
PceI AGGCCT 1 cut(s) 671
PcsI WCGNNNNNNNCGW 1 cut(s) 414
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 3 cut(s) 247, 295, 490
PflFI GACNNNGTC 1 cut(s) 816
PkrI GCNGC 6 cut(s) 28, 280, 306, 368, 925, 1699
PleI GAGTC 1 cut(s) 59
PluTI GGCGCC 2 cut(s) 42, 171
PmaCI CACGTG 2 cut(s) 174, 226
PmlI CACGTG 2 cut(s) 174, 226
PpsI GAGTC 1 cut(s) 59
Ppu21I YACGTR 2 cut(s) 174, 226
PsiI TTATAA 1 cut(s) 1485
Psp6I CCWGG 3 cut(s) 116, 671, 1652
PspCI CACGTG 2 cut(s) 174, 226
PspGI CCWGG 3 cut(s) 116, 671, 1652
PspN4I GGNNCC 5 cut(s) 40, 141, 169, 623, 1241
PspPI GGNCC 2 cut(s) 1239, 1589
PstI CTGCAG 2 cut(s) 925, 1528
PstNI CAGNNNCTG 1 cut(s) 920
PsyI GACNNNGTC 1 cut(s) 816
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 5 cut(s) 361, 449, 537, 908, 1312
RsaNI GTAC 5 cut(s) 360, 448, 536, 907, 1311
RseI CAYNNNNRTG 1 cut(s) 1072
SaqAI TTAA 7 cut(s) 312, 477, 750, 863, 966, 1071, 1377
SatI GCNGC 6 cut(s) 27, 279, 305, 367, 924, 1698
Sau3AI GATC 5 cut(s) 288, 1107, 1348, 1467, 1642
Sau96I GGNCC 2 cut(s) 1239, 1589
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 3 cut(s) 118, 673, 1654
SduI GDGCHC 3 cut(s) 179, 231, 741
SfaNI GCATC 4 cut(s) 653, 997, 1045, 1408
SfcI CTRYAG 3 cut(s) 318, 921, 1524
SfoI GGCGCC 2 cut(s) 40, 169
Sfr274I CTCGAG 1 cut(s) 485
SgrAI CRCCGGYG 1 cut(s) 151
SinI GGWCC 1 cut(s) 1589
SlaI CTCGAG 1 cut(s) 485
SmiMI CAYNNNNRTG 1 cut(s) 1072
SmlI CTYRAG 3 cut(s) 485, 1316, 1440
SmoI CTYRAG 3 cut(s) 485, 1316, 1440
SphI GCATGC 2 cut(s) 1067, 1652
SseBI AGGCCT 1 cut(s) 671
SsiI CCGC 6 cut(s) 27, 73, 94, 198, 305, 560
SspDI GGCGCC 2 cut(s) 38, 167
SspMI CTAG 5 cut(s) 617, 639, 857, 1463, 1726
StuI AGGCCT 1 cut(s) 671
StyD4I CCNGG 3 cut(s) 116, 671, 1652
StyI CCWWGG 1 cut(s) 1323
TaaI ACNGT 4 cut(s) 16, 447, 852, 1127
TaiI ACGT 2 cut(s) 176, 228
TaqI TCGA 7 cut(s) 81, 87, 186, 231, 486, 822, 1272
TatI WGTACW 3 cut(s) 447, 535, 906
TauI GCSGC 2 cut(s) 29, 307
TfiI GAWTC 3 cut(s) 247, 295, 490
Tru1I TTAA 7 cut(s) 312, 477, 750, 863, 966, 1071, 1377
Tru9I TTAA 7 cut(s) 312, 477, 750, 863, 966, 1071, 1377
TscAI CASTG 1 cut(s) 1065
TseFI GTSAC 3 cut(s) 221, 886, 1559
TseI GCWGC 4 cut(s) 278, 366, 923, 1697
Tsp45I GTSAC 3 cut(s) 221, 886, 1559
TspDTI ATGAA 5 cut(s) 385, 1073, 1113, 1151, 1488
TspGWI ACGGA 2 cut(s) 805, 1624
TspRI CASTG 1 cut(s) 1065
Tth111I GACNNNGTC 1 cut(s) 816
VneI GTGCAC 1 cut(s) 175
VpaK11BI GGWCC 1 cut(s) 1589
XagI CCTNNNNNAGG 1 cut(s) 615
XapI RAATTY 4 cut(s) 392, 1186, 1355, 1600
XbaI TCTAGA 1 cut(s) 1462
XceI RCATGY 3 cut(s) 1067, 1336, 1652
XhoI CTCGAG 1 cut(s) 485
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 5 cut(s) 617, 639, 857, 1463, 1726
Zsp2I ATGCAT 3 cut(s) 386, 1069, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.