FvH4_1g08750

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000835
Physical Location & Seq
Forward (+)
4655152 .. 4657635
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08750.t1

Sequence Viewer

Length: 1656 bp
ATGGAAACCCTAGAAGACGACGGCGCGAACGTCGGCTTCTCAATCCTGATGCAGTTCTCCGACGCCAGGAGCGAAATCGACCTCGAAATCCGCAAGCTCATAACCGCAATCTGCCACGTATTCCGTCACCACAAGGCTCCTCCCACGCCGCTGGCCTACTTGCGCGCCACGTGCTCCTCTCTTAACCTGATCGCCGCCGCGAATCCCCGACCTTCCTCTGAAGAGCTCCACGCCCGCTTCATAATCCTCTCCAACGTCATCCCCAAAGTCCCCGCCGCATTTCTCGTCAATAATCTCCGGATGGTCTGCAACTCCTTAGGCCCAGCTCTTCGGGTTGCCTCTCTGATGTGCCATGATGCTGCCGCCTGCGCCGGAATTGAATGCATTGCTCAATTGCTCATCAGCATCACCAATTACAGCTGGTCACAAGTTTCCGAAACCTTCGGTTTCTTACTCAGCTACACTAATGACAATATGAAGAATTTCAAGGTAAGAAAACAAGCGCGTTTGATTGTTTACGATACACTCCAAAGTTTTGTAGCAACTCCGCTGCTGTTGGGACCTGCAATTAAAACGATTATGGACTTGTTCATGAACTACTATCCTATCCGGCCGACCAGTGATGGAGTTATTAGCCTCAAGGCCGAGGATACTTTGGATCTTGTGATAGTATGCCTTGGCGTTATGTCAACCGAGGACAGAACTGCTGTGCTCGTCTATTTGAAAGAGCTCTTGGAACTGCACCATACAGATCTCACAGGAATCATCACAGATGCTCTGCACAGACTCTTCCTCAACCCATCATTACCCGATGTTCCTGTCGAATTGTTGCTCGAGCTAATATGCTCAATATGTCTTTCTGTCTCCCAACACAAGACCAAGTACATCATGAAAAAAGTAGCTGGTTTGCTCAATTCCGGAGTGCCAAAAATCTATTCCCTCAACAAGCAAATCTGCAAAACTAAACTCCCAGTTGTGTTTGATGCACTCATTGTTTTGCTCGAACAGTCTGAAGCAGTAAAGGACGTCATTCAAGCTGGAAATGCCTTTAAGTGTCTCATTGCTTATATTGATGACAGCTTGATTAAACAGGGAGTTGACAGTACTCTGATGAATGCAAACATGGACGATGGGAGCCAGTCTCAGCCAACTCTAATTGAAAAACTGAAGTTTAATAGCTGTTACTATACAGGAAAATACTCTTCTTGTTTGATGAGGGATACTGTCAAAACCTTGGCAGACATGCAGAAATTGCCGGATAAATTATTCTTTTACAAGGAGGAGGGTAAGCTTCTTCTGGAAATGGTTGTTCAGAAATGTGGGCTTGATGCTATTATGGCCATCATCCCTCAAGAACACGTGCAACTGCTTGTAGAGATCAGTGAACAACAGGGTTCTAAATCTGTGGGTGTGAGTTCTCGTGTAGTCAAAGCAGCTACATATGGAAGTAACTTATCTCAGTTTAAGTATATGAACAACCGTGATCTTAAACTTATATCATTCAAGAATTACAAACGGAGAATGGCTGGTAAAAAGTGTTTGTCTAATCGCCAGCTGAGAGCATTGTTGGAAAGGCAGGCTAGGAGGCGTGCTGTGGAGGCCATCAGTGGAGGAATTGCAGGTGCAGCTAGGATGACAAAGAAGCTTAAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

552

Amino Acids

61.25

Weight (kDa)

8.96

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 3 - 268 1.4e-40 RRP12-like, N-terminal HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1610
AatII GACGTC 1 cut(s) 1029
Acc36I ACCTGC 2 cut(s) 571, 1610
AccII CGCG 4 cut(s) 26, 165, 200, 505
AccIII TCCGGA 2 cut(s) 297, 917
AclWI GGATC 1 cut(s) 666
AcoI YGGCCR 2 cut(s) 611, 1338
AcsI RAATTY 1 cut(s) 481
AcuI CTGAAG 3 cut(s) 240, 1032, 1187
AcvI CACGTG 2 cut(s) 171, 1360
AcyI GRCGYC 2 cut(s) 63, 1026
AfaI GTAC 2 cut(s) 884, 1105
AfiI CCNNNNNNNGG 1 cut(s) 66
AflIII ACRYGT 1 cut(s) 1357
AgsI TTSAA 6 cut(s) 380, 487, 724, 1034, 1160, 1504
AjnI CCWGG 1 cut(s) 65
AjuI GAANNNNNNNTTGG 4 cut(s) 716, 748, 919, 951
Alw21I GWGCWC 4 cut(s) 176, 228, 714, 732
Alw26I GTCTC 3 cut(s) 868, 1061, 1146
AlwI GGATC 1 cut(s) 666
Ama87I CYCGRG 1 cut(s) 833
Aor13HI TCCGGA 2 cut(s) 297, 917
AoxI GGCC 6 cut(s) 153, 319, 611, 642, 1338, 1599
ApeKI GCWGC 4 cut(s) 359, 550, 1433, 1625
ApoI RAATTY 1 cut(s) 481
Asp700I GAANNNNTTC 1 cut(s) 482
AspLEI GCGC 5 cut(s) 26, 165, 167, 371, 505
AspS9I GGNCC 2 cut(s) 320, 560
AsuHPI GGTGA 2 cut(s) 119, 400
AvaI CYCGRG 1 cut(s) 833
AvaII GGWCC 1 cut(s) 560
AxyI CCTNAGG 1 cut(s) 316
BalI TGGCCA 1 cut(s) 1340
BanII GRGCYC 2 cut(s) 228, 732
BauI CACGAG 1 cut(s) 1419
BbrPI CACGTG 2 cut(s) 171, 1360
BbsI GAAGAC 1 cut(s) 21
Bbv12I GWGCWC 4 cut(s) 176, 228, 714, 732
BbvI GCAGC 4 cut(s) 346, 537, 1445, 1637
BccI CCATC 6 cut(s) 295, 617, 808, 1124, 1349, 1610
BceAI ACGGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 67
BciVI GTATCC 2 cut(s) 643, 1213
BcoDI GTCTC 3 cut(s) 868, 1061, 1146
BfaI CTAG 3 cut(s) 11, 1581, 1629
BfuAI ACCTGC 2 cut(s) 571, 1610
BfuI GTATCC 2 cut(s) 643, 1213
BglII AGATCT 1 cut(s) 751
BisI GCNGC 9 cut(s) 149, 195, 198, 276, 360, 363, 551, 1434, 1626
BlsI GCNGC 9 cut(s) 150, 196, 199, 277, 361, 364, 552, 1435, 1627
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 1 cut(s) 67
Bme18I GGWCC 1 cut(s) 560
BmeT110I CYCGRG 1 cut(s) 833
BmgT120I GGNCC 2 cut(s) 320, 560
BmiI GGNNCC 3 cut(s) 138, 561, 1136
BmrFI CCNGG 1 cut(s) 67
BmrI ACTGGG 1 cut(s) 965
BmsI GCATC 6 cut(s) 39, 346, 414, 763, 973, 1318
BmuI ACTGGG 1 cut(s) 965
BpiI GAAGAC 1 cut(s) 21
BplI GAGNNNNNCTC 2 cut(s) 1126, 1158
BpuEI CTTGAG 2 cut(s) 623, 1335
BsaAI YACGTR 3 cut(s) 118, 171, 1360
BsaHI GRCGYC 2 cut(s) 63, 1026
BsaJI CCNNGG 4 cut(s) 645, 676, 693, 1233
BsaWI WCCGGW 2 cut(s) 297, 917
Bsc4I CCNNNNNNNGG 1 cut(s) 66
Bse1I ACTGG 3 cut(s) 618, 971, 1138
Bse21I CCTNAGG 1 cut(s) 316
Bse3DI GCAATG 2 cut(s) 384, 1059
BseAI TCCGGA 2 cut(s) 297, 917
BseBI CCWGG 1 cut(s) 67
BseDI CCNNGG 4 cut(s) 645, 676, 693, 1233
BseGI GGATG 4 cut(s) 258, 306, 1344, 1638
BseLI CCNNNNNNNGG 1 cut(s) 66
BseMI GCAATG 2 cut(s) 384, 1059
BseMII CTCAG 4 cut(s) 469, 1157, 1472, 1547
BseNI ACTGG 3 cut(s) 618, 971, 1138
BsePI GCGCGC 1 cut(s) 163
BseRI GAGGAG 3 cut(s) 129, 166, 1295
BseX3I CGGCCG 1 cut(s) 611
BseXI GCAGC 4 cut(s) 346, 537, 1445, 1637
BseYI CCCAGC 1 cut(s) 322
BsgI GTGCAG 3 cut(s) 725, 764, 1644
Bsh1236I CGCG 4 cut(s) 26, 165, 200, 505
Bsh1285I CGRYCG 1 cut(s) 614
BshFI GGCC 6 cut(s) 155, 321, 613, 644, 1340, 1601
BsiEI CGRYCG 1 cut(s) 614
BsiHKAI GWGCWC 4 cut(s) 176, 228, 714, 732
BsiHKCI CYCGRG 1 cut(s) 833
BsiSI CCGG 5 cut(s) 298, 372, 610, 918, 1256
BslFI GGGAC 2 cut(s) 254, 573
BslI CCNNNNNNNGG 1 cut(s) 66
BsmAI GTCTC 3 cut(s) 868, 1061, 1146
BsmFI GGGAC 2 cut(s) 254, 573
BsmI GAATGC 2 cut(s) 386, 1120
BsnI GGCC 6 cut(s) 155, 321, 613, 644, 1340, 1601
BsoBI CYCGRG 1 cut(s) 833
Bsp1286I GDGCHC 4 cut(s) 176, 228, 714, 732
Bsp13I TCCGGA 2 cut(s) 297, 917
Bsp143I GATC 5 cut(s) 189, 658, 751, 1377, 1483
BspANI GGCC 6 cut(s) 155, 321, 613, 644, 1340, 1601
BspCNI CTCAG 4 cut(s) 468, 1156, 1471, 1548
BspEI TCCGGA 2 cut(s) 297, 917
BspFNI CGCG 4 cut(s) 26, 165, 200, 505
BspHI TCATGA 2 cut(s) 591, 888
BspLI GGNNCC 3 cut(s) 138, 561, 1136
BspMI ACCTGC 2 cut(s) 571, 1610
BspPI GGATC 1 cut(s) 666
BspQI GCTCTTC 2 cut(s) 216, 333
BsrDI GCAATG 2 cut(s) 384, 1059
BsrI ACTGG 3 cut(s) 618, 971, 1138
BssECI CCNNGG 4 cut(s) 645, 676, 693, 1233
BssHII GCGCGC 1 cut(s) 163
BssMI GATC 5 cut(s) 189, 658, 751, 1377, 1483
BssNI GRCGYC 2 cut(s) 63, 1026
BssSI CACGAG 1 cut(s) 1419
BssT1I CCWWGG 2 cut(s) 676, 1233
Bst2BI CACGAG 1 cut(s) 1419
Bst2UI CCWGG 1 cut(s) 67
Bst4CI ACNGT 4 cut(s) 1008, 1103, 1225, 1481
Bst6I CTCTTC 4 cut(s) 216, 333, 794, 1207
BstACI GRCGYC 2 cut(s) 63, 1026
BstAPI GCANNNNNTGC 1 cut(s) 1252
BstBAI YACGTR 3 cut(s) 118, 171, 1360
BstC8I GCNNGC 8 cut(s) 95, 153, 165, 235, 367, 1553, 1578, 1590
BstDEI CTNAG 5 cut(s) 316, 455, 1143, 1458, 1556
BstF5I GGATG 4 cut(s) 258, 306, 1344, 1638
BstFNI CGCG 4 cut(s) 26, 165, 200, 505
BstHHI GCGC 5 cut(s) 26, 165, 167, 371, 505
BstKTI GATC 5 cut(s) 192, 661, 754, 1380, 1486
BstMAI GTCTC 3 cut(s) 868, 1061, 1146
BstMBI GATC 5 cut(s) 189, 658, 751, 1377, 1483
BstMCI CGRYCG 1 cut(s) 614
BstMWI GCNNNNNNNGC 7 cut(s) 171, 368, 1043, 1252, 1337, 1598, 1625
BstNI CCWGG 1 cut(s) 67
BstNSI RCATGY 1 cut(s) 1246
BstSCI CCNGG 1 cut(s) 65
BstUI CGCG 4 cut(s) 26, 165, 200, 505
BstV1I GCAGC 4 cut(s) 346, 537, 1445, 1637
BstV2I GAAGAC 1 cut(s) 21
BstX2I RGATCY 2 cut(s) 658, 751
BstXI CCANNNNNNTGG 1 cut(s) 151
BstYI RGATCY 2 cut(s) 658, 751
BstZI CGGCCG 1 cut(s) 611
Bsu36I CCTNAGG 1 cut(s) 316
BsuI GTATCC 2 cut(s) 643, 1213
BsuRI GGCC 6 cut(s) 155, 321, 613, 644, 1340, 1601
BtsCI GGATG 4 cut(s) 258, 306, 1344, 1638
BtsIMutI CAGTG 3 cut(s) 625, 1387, 1612
BveI ACCTGC 2 cut(s) 571, 1610
Cac8I GCNNGC 8 cut(s) 95, 153, 165, 235, 367, 1553, 1578, 1590
CciI TCATGA 2 cut(s) 591, 888
CfoI GCGC 5 cut(s) 26, 165, 167, 371, 505
Cfr13I GGNCC 2 cut(s) 320, 560
CseI GACGC 1 cut(s) 71
Csp6I GTAC 2 cut(s) 883, 1104
CviAII CATG 5 cut(s) 353, 592, 889, 1123, 1243
CviQI GTAC 2 cut(s) 883, 1104
DdeI CTNAG 5 cut(s) 316, 455, 1143, 1458, 1556
DpnI GATC 5 cut(s) 191, 660, 753, 1379, 1485
DpnII GATC 5 cut(s) 189, 658, 751, 1377, 1483
EaeI YGGCCR 2 cut(s) 611, 1338
EagI CGGCCG 1 cut(s) 611
Eam1104I CTCTTC 4 cut(s) 216, 333, 794, 1207
EarI CTCTTC 4 cut(s) 216, 333, 794, 1207
Ecl136II GAGCTC 2 cut(s) 226, 730
EclXI CGGCCG 1 cut(s) 611
Eco130I CCWWGG 2 cut(s) 676, 1233
Eco24I GRGCYC 2 cut(s) 228, 732
Eco47I GGWCC 1 cut(s) 560
Eco52I CGGCCG 1 cut(s) 611
Eco53kI GAGCTC 2 cut(s) 226, 730
Eco57I CTGAAG 3 cut(s) 240, 1032, 1187
Eco72I CACGTG 2 cut(s) 171, 1360
Eco81I CCTNAGG 1 cut(s) 316
Eco88I CYCGRG 1 cut(s) 833
EcoICRI GAGCTC 2 cut(s) 226, 730
EcoO109I RGGNCCY 1 cut(s) 560
EcoRII CCWGG 1 cut(s) 65
EcoT14I CCWWGG 2 cut(s) 676, 1233
EcoT22I ATGCAT 1 cut(s) 386
EcoT38I GRGCYC 2 cut(s) 228, 732
ErhI CCWWGG 2 cut(s) 676, 1233
FaeI CATG 5 cut(s) 356, 595, 892, 1126, 1246
FaqI GGGAC 2 cut(s) 254, 573
FatI CATG 5 cut(s) 352, 591, 888, 1122, 1242
FauI CCCGC 2 cut(s) 242, 280
FauNDI CATATG 1 cut(s) 1441
Fnu4HI GCNGC 9 cut(s) 149, 195, 198, 276, 360, 363, 551, 1434, 1626
FokI GGATG 4 cut(s) 245, 313, 1331, 1645
FriOI GRGCYC 2 cut(s) 228, 732
Fsp4HI GCNGC 9 cut(s) 149, 195, 198, 276, 360, 363, 551, 1434, 1626
FspBI CTAG 3 cut(s) 11, 1581, 1629
GlaI GCGC 5 cut(s) 25, 164, 166, 370, 504
GluI GCNGC 9 cut(s) 149, 195, 198, 276, 360, 363, 551, 1434, 1626
GsaI CCCAGC 1 cut(s) 326
HaeIII GGCC 6 cut(s) 155, 321, 613, 644, 1340, 1601
HapII CCGG 5 cut(s) 298, 372, 610, 918, 1256
HgaI GACGC 1 cut(s) 71
HhaI GCGC 5 cut(s) 26, 165, 167, 371, 505
Hin1I GRCGYC 2 cut(s) 63, 1026
Hin1II CATG 5 cut(s) 356, 595, 892, 1126, 1246
Hin6I GCGC 5 cut(s) 24, 163, 165, 369, 503
HinP1I GCGC 5 cut(s) 24, 163, 165, 369, 503
HincII GTYRAC 2 cut(s) 690, 1099
HindII GTYRAC 2 cut(s) 690, 1099
HindIII AAGCTT 2 cut(s) 1289, 1643
HinfI GANTC 3 cut(s) 202, 762, 786
HpaII CCGG 5 cut(s) 298, 372, 610, 918, 1256
HphI GGTGA 2 cut(s) 119, 400
Hpy166II GTNNAC 4 cut(s) 517, 690, 1099, 1385
Hpy188I TCNGA 7 cut(s) 61, 220, 345, 436, 1012, 1110, 1314
Hpy188III TCNNGA 8 cut(s) 46, 298, 592, 889, 918, 1298, 1352, 1504
Hpy8I GTNNAC 4 cut(s) 517, 690, 1099, 1385
Hpy99I CGWCG 3 cut(s) 23, 35, 65
HpyAV CCTTC 2 cut(s) 222, 451
HpyCH4III ACNGT 4 cut(s) 1008, 1103, 1225, 1481
HpyCH4IV ACGT 6 cut(s) 30, 117, 170, 255, 1026, 1359
HpyF10VI GCNNNNNNNGC 7 cut(s) 171, 368, 1043, 1252, 1337, 1598, 1625
HpyF3I CTNAG 5 cut(s) 316, 455, 1143, 1458, 1556
HpySE526I ACGT 6 cut(s) 30, 117, 170, 255, 1026, 1359
Hsp92I GRCGYC 2 cut(s) 63, 1026
Hsp92II CATG 5 cut(s) 356, 595, 892, 1126, 1246
HspAI GCGC 5 cut(s) 24, 163, 165, 369, 503
Kpn2I TCCGGA 2 cut(s) 297, 917
Kzo9I GATC 5 cut(s) 189, 658, 751, 1377, 1483
LguI GCTCTTC 2 cut(s) 216, 333
LmnI GCTCC 5 cut(s) 69, 142, 179, 231, 1134
Lsp1109I GCAGC 4 cut(s) 346, 537, 1445, 1637
LweI GCATC 6 cut(s) 39, 346, 414, 763, 973, 1318
MaeI CTAG 3 cut(s) 11, 1581, 1629
MaeII ACGT 6 cut(s) 30, 117, 170, 255, 1026, 1359
MaeIII GTNAC 4 cut(s) 125, 423, 1181, 1448
MalI GATC 5 cut(s) 191, 660, 753, 1379, 1485
MboI GATC 5 cut(s) 189, 658, 751, 1377, 1483
MboII GAAGA 7 cut(s) 26, 233, 320, 490, 781, 1194, 1286
MfeI CAATTG 1 cut(s) 392
MflI RGATCY 2 cut(s) 658, 751
MhlI GDGCHC 4 cut(s) 176, 228, 714, 732
MlsI TGGCCA 1 cut(s) 1340
MluNI TGGCCA 1 cut(s) 1340
MlyI GAGTC 1 cut(s) 780
MmeI TCCRAC 3 cut(s) 84, 276, 1548
Mox20I TGGCCA 1 cut(s) 1340
Mph1103I ATGCAT 1 cut(s) 386
MroI TCCGGA 2 cut(s) 297, 917
MroXI GAANNNNTTC 1 cut(s) 482
MscI TGGCCA 1 cut(s) 1340
MseI TTAA 8 cut(s) 183, 570, 1050, 1086, 1173, 1464, 1488, 1647
Msp20I TGGCCA 1 cut(s) 1340
MspA1I CMGCKG 4 cut(s) 151, 420, 550, 1555
MspI CCGG 5 cut(s) 298, 372, 610, 918, 1256
MspR9I CCNGG 1 cut(s) 67
MunI CAATTG 1 cut(s) 392
Mva1269I GAATGC 2 cut(s) 386, 1120
MvaI CCWGG 1 cut(s) 67
MvnI CGCG 4 cut(s) 26, 165, 200, 505
MwoI GCNNNNNNNGC 7 cut(s) 171, 368, 1043, 1252, 1337, 1598, 1625
NdeI CATATG 1 cut(s) 1441
NdeII GATC 5 cut(s) 189, 658, 751, 1377, 1483
NlaIII CATG 5 cut(s) 356, 595, 892, 1126, 1246
NlaIV GGNNCC 3 cut(s) 138, 561, 1136
NmeAIII GCCGAG 1 cut(s) 670
NmuCI GTSAC 2 cut(s) 125, 423
NsiI ATGCAT 1 cut(s) 386
NspI RCATGY 1 cut(s) 1246
PaeR7I CTCGAG 1 cut(s) 833
PagI TCATGA 2 cut(s) 591, 888
PaqCI CACCTGC 1 cut(s) 1610
PauI GCGCGC 1 cut(s) 163
PciSI GCTCTTC 2 cut(s) 216, 333
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 69
PctI GAATGC 2 cut(s) 386, 1120
PdmI GAANNNNTTC 1 cut(s) 482
PfeI GAWTC 2 cut(s) 202, 762
PkrI GCNGC 9 cut(s) 150, 196, 199, 277, 361, 364, 552, 1435, 1627
PleI GAGTC 1 cut(s) 780
PmaCI CACGTG 2 cut(s) 171, 1360
PmlI CACGTG 2 cut(s) 171, 1360
PpsI GAGTC 1 cut(s) 780
Ppu21I YACGTR 3 cut(s) 118, 171, 1360
PpuMI RGGWCCY 1 cut(s) 560
Psp124BI GAGCTC 2 cut(s) 228, 732
Psp5II RGGWCCY 1 cut(s) 560
Psp6I CCWGG 1 cut(s) 65
PspCI CACGTG 2 cut(s) 171, 1360
PspFI CCCAGC 1 cut(s) 322
PspGI CCWGG 1 cut(s) 65
PspN4I GGNNCC 3 cut(s) 138, 561, 1136
PspPI GGNCC 2 cut(s) 320, 560
PspPPI RGGWCCY 1 cut(s) 560
PspXI VCTCGAGB 1 cut(s) 833
PsuI RGATCY 2 cut(s) 658, 751
PteI GCGCGC 1 cut(s) 163
PvuII CAGCTG 2 cut(s) 420, 1555
RsaI GTAC 2 cut(s) 884, 1105
RsaNI GTAC 2 cut(s) 883, 1104
SacI GAGCTC 2 cut(s) 228, 732
SapI GCTCTTC 2 cut(s) 216, 333
SaqAI TTAA 8 cut(s) 183, 570, 1050, 1086, 1173, 1464, 1488, 1647
SatI GCNGC 9 cut(s) 149, 195, 198, 276, 360, 363, 551, 1434, 1626
Sau3AI GATC 5 cut(s) 189, 658, 751, 1377, 1483
Sau96I GGNCC 2 cut(s) 320, 560
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 1 cut(s) 780
ScrFI CCNGG 1 cut(s) 67
SduI GDGCHC 4 cut(s) 176, 228, 714, 732
SfaNI GCATC 6 cut(s) 39, 346, 414, 763, 973, 1318
Sfr274I CTCGAG 1 cut(s) 833
SinI GGWCC 1 cut(s) 560
SlaI CTCGAG 1 cut(s) 833
SmlI CTYRAG 3 cut(s) 638, 833, 1350
SmoI CTYRAG 3 cut(s) 638, 833, 1350
SspMI CTAG 3 cut(s) 11, 1581, 1629
SstI GAGCTC 2 cut(s) 228, 732
StyD4I CCNGG 1 cut(s) 65
StyI CCWWGG 2 cut(s) 676, 1233
TaaI ACNGT 4 cut(s) 1008, 1103, 1225, 1481
TaiI ACGT 6 cut(s) 33, 120, 173, 258, 1029, 1362
TaqI TCGA 5 cut(s) 78, 84, 822, 834, 1002
TatI WGTACW 2 cut(s) 882, 1103
TauI GCSGC 5 cut(s) 151, 197, 200, 278, 365
TfiI GAWTC 2 cut(s) 202, 762
Tru1I TTAA 8 cut(s) 183, 570, 1050, 1086, 1173, 1464, 1488, 1647
Tru9I TTAA 8 cut(s) 183, 570, 1050, 1086, 1173, 1464, 1488, 1647
TscAI CASTG 3 cut(s) 625, 1387, 1612
TseFI GTSAC 2 cut(s) 125, 423
TseI GCWGC 4 cut(s) 359, 550, 1433, 1625
Tsp45I GTSAC 2 cut(s) 125, 423
TspDTI ATGAA 7 cut(s) 229, 491, 580, 608, 905, 1127, 1487
TspGWI ACGGA 2 cut(s) 113, 1531
TspRI CASTG 3 cut(s) 625, 1387, 1612
VpaK11BI GGWCC 1 cut(s) 560
XapI RAATTY 1 cut(s) 481
XceI RCATGY 1 cut(s) 1246
XhoI CTCGAG 1 cut(s) 833
XmnI GAANNNNTTC 1 cut(s) 482
XspI CTAG 3 cut(s) 11, 1581, 1629
ZraI GACGTC 1 cut(s) 1027
ZrmI AGTACT 1 cut(s) 1105
Zsp2I ATGCAT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.