Phosphoenolpyruvate carboxylase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PEPcase | PF00311 | 163 - 763 | 9.9e-229 | Phosphoenolpyruvate carboxylase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 584, 2651, 2974 |
| Acc65I | GGTACC | 1 cut(s) | 2016 |
| AccB1I | GGYRCC | 3 cut(s) | 558, 2016, 2826 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1895, 2013, 2912 |
| AccI | GTMKAC | 4 cut(s) | 66, 262, 1579, 2469 |
| AccII | CGCG | 1 cut(s) | 1755 |
| AccIII | TCCGGA | 1 cut(s) | 1117 |
| AclWI | GGATC | 7 cut(s) | 1389, 1394, 1486, 1510, 2031, 2293, 3071 |
| AcsI | RAATTY | 4 cut(s) | 1070, 1661, 2309, 2483 |
| AcuI | CTGAAG | 3 cut(s) | 261, 2715, 3017 |
| AcyI | GRCGYC | 2 cut(s) | 559, 2827 |
| AfaI | GTAC | 5 cut(s) | 633, 1740, 2018, 2269, 2714 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 861, 1834, 1895, 2013, 2425, 2815, 2912 |
| AgsI | TTSAA | 8 cut(s) | 509, 601, 848, 1164, 1262, 1955, 2240, 2704 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1697 |
| AhlI | ACTAGT | 1 cut(s) | 482 |
| AjnI | CCWGG | 8 cut(s) | 337, 1090, 1239, 1894, 2251, 2301, 2499, 2514 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1026, 1058, 2864, 2896 |
| Alw21I | GWGCWC | 3 cut(s) | 179, 1680, 2859 |
| Alw26I | GTCTC | 7 cut(s) | 459, 787, 1143, 1179, 2325, 2818, 2995 |
| AlwI | GGATC | 7 cut(s) | 1389, 1394, 1486, 1510, 2031, 2293, 3071 |
| Ama87I | CYCGRG | 1 cut(s) | 2397 |
| Aor13HI | TCCGGA | 1 cut(s) | 1117 |
| AoxI | GGCC | 4 cut(s) | 1088, 1094, 2218, 2723 |
| ApaI | GGGCCC | 1 cut(s) | 2222 |
| ApoI | RAATTY | 4 cut(s) | 1070, 1661, 2309, 2483 |
| AseI | ATTAAT | 2 cut(s) | 408, 1547 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2487, 2566 |
| Asp718I | GGTACC | 1 cut(s) | 2016 |
| AspA2I | CCTAGG | 1 cut(s) | 2860 |
| AspLEI | GCGC | 2 cut(s) | 561, 2829 |
| AspS9I | GGNCC | 6 cut(s) | 1094, 1251, 1304, 1486, 2218, 2219 |
| AsuC2I | CCSGG | 1 cut(s) | 2021 |
| AsuHPI | GGTGA | 9 cut(s) | 514, 746, 920, 979, 1119, 2071, 2167, 2849, 2896 |
| AsuII | TTCGAA | 1 cut(s) | 167 |
| AvaI | CYCGRG | 1 cut(s) | 2397 |
| AvaII | GGWCC | 3 cut(s) | 1251, 1304, 1486 |
| AvrII | CCTAGG | 1 cut(s) | 2860 |
| BaeGI | GKGCMC | 2 cut(s) | 1628, 2222 |
| BanI | GGYRCC | 3 cut(s) | 558, 2016, 2826 |
| BanII | GRGCYC | 3 cut(s) | 1680, 2222, 2859 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1513, 1545 |
| BauI | CACGAG | 1 cut(s) | 201 |
| BbsI | GAAGAC | 2 cut(s) | 1355, 2703 |
| Bbv12I | GWGCWC | 3 cut(s) | 179, 1680, 2859 |
| BceAI | ACGGC | 2 cut(s) | 144, 1103 |
| BciT130I | CCWGG | 8 cut(s) | 339, 1092, 1241, 1896, 2253, 2303, 2501, 2516 |
| BciVI | GTATCC | 2 cut(s) | 1738, 2063 |
| BclI | TGATCA | 3 cut(s) | 1015, 1446, 1989 |
| BcnI | CCSGG | 1 cut(s) | 2021 |
| BcoDI | GTCTC | 7 cut(s) | 459, 787, 1143, 1179, 2325, 2818, 2995 |
| BcuI | ACTAGT | 1 cut(s) | 482 |
| BfmI | CTRYAG | 2 cut(s) | 2571, 3069 |
| BfoI | RGCGCY | 2 cut(s) | 562, 2830 |
| BfuAI | ACCTGC | 3 cut(s) | 584, 2651, 2974 |
| BfuI | GTATCC | 2 cut(s) | 1738, 2063 |
| BglII | AGATCT | 3 cut(s) | 511, 1292, 2430 |
| BlnI | CCTAGG | 1 cut(s) | 2860 |
| BlpI | GCTNAGC | 2 cut(s) | 1764, 2520 |
| BmcAI | AGTACT | 1 cut(s) | 1740 |
| Bme1390I | CCNGG | 9 cut(s) | 339, 1092, 1241, 1896, 2021, 2253, 2303, 2501, 2516 |
| Bme18I | GGWCC | 3 cut(s) | 1251, 1304, 1486 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1697 |
| BmeT110I | CYCGRG | 1 cut(s) | 2397 |
| BmgT120I | GGNCC | 6 cut(s) | 1094, 1251, 1304, 1486, 2218, 2219 |
| BmiI | GGNNCC | 8 cut(s) | 560, 1275, 1487, 1944, 2018, 2219, 2220, 2828 |
| BmrFI | CCNGG | 9 cut(s) | 339, 1092, 1241, 1896, 2021, 2253, 2303, 2501, 2516 |
| BmsI | GCATC | 6 cut(s) | 287, 1588, 1843, 2059, 2080, 2934 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1563 |
| BpiI | GAAGAC | 2 cut(s) | 1355, 2703 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2417, 2449 |
| BpmI | CTGGAG | 3 cut(s) | 14, 161, 1397 |
| Bpu10I | CCTNAGC | 1 cut(s) | 554 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1764, 2520 |
| Bpu14I | TTCGAA | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 5 cut(s) | 41, 1085, 1990, 2115, 2950 |
| BpuMI | CCSGG | 1 cut(s) | 2021 |
| BsaBI | GATNNNNATC | 3 cut(s) | 747, 1398, 1413 |
| BsaHI | GRCGYC | 2 cut(s) | 559, 2827 |
| BsaI | GGTCTC | 1 cut(s) | 459 |
| BsaJI | CCNNGG | 6 cut(s) | 337, 1091, 1239, 2514, 2600, 2860 |
| BsaWI | WCCGGW | 2 cut(s) | 711, 1117 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1779, 1809 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 861, 1834, 1895, 2013, 2425, 2815, 2912 |
| Bse1I | ACTGG | 8 cut(s) | 575, 682, 891, 1254, 1662, 1746, 2734, 2914 |
| Bse3DI | GCAATG | 2 cut(s) | 234, 2375 |
| Bse8I | GATNNNNATC | 3 cut(s) | 747, 1398, 1413 |
| BseAI | TCCGGA | 1 cut(s) | 1117 |
| BseBI | CCWGG | 8 cut(s) | 339, 1092, 1241, 1896, 2253, 2303, 2501, 2516 |
| BseDI | CCNNGG | 6 cut(s) | 337, 1091, 1239, 2514, 2600, 2860 |
| BseJI | GATNNNNATC | 3 cut(s) | 747, 1398, 1413 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 861, 1834, 1895, 2013, 2425, 2815, 2912 |
| BseMI | GCAATG | 2 cut(s) | 234, 2375 |
| BseNI | ACTGG | 8 cut(s) | 575, 682, 891, 1254, 1662, 1746, 2734, 2914 |
| BseRI | GAGGAG | 4 cut(s) | 197, 2385, 2441, 2947 |
| BseSI | GKGCMC | 2 cut(s) | 1628, 2222 |
| BseYI | CCCAGC | 1 cut(s) | 2244 |
| BsgI | GTGCAG | 3 cut(s) | 375, 886, 1068 |
| Bsh1236I | CGCG | 1 cut(s) | 1755 |
| Bsh1285I | CGRYCG | 1 cut(s) | 70 |
| BshFI | GGCC | 4 cut(s) | 1090, 1096, 2220, 2725 |
| BshNI | GGYRCC | 3 cut(s) | 558, 2016, 2826 |
| BsiEI | CGRYCG | 1 cut(s) | 70 |
| BsiHKAI | GWGCWC | 3 cut(s) | 179, 1680, 2859 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2397 |
| BsiSI | CCGG | 4 cut(s) | 42, 712, 1118, 2020 |
| BslFI | GGGAC | 6 cut(s) | 71, 601, 1222, 1685, 2700, 2878 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 861, 1834, 1895, 2013, 2425, 2815, 2912 |
| BsmAI | GTCTC | 7 cut(s) | 459, 787, 1143, 1179, 2325, 2818, 2995 |
| BsmBI | CGTCTC | 1 cut(s) | 2818 |
| BsmFI | GGGAC | 6 cut(s) | 71, 601, 1222, 1685, 2700, 2878 |
| BsnI | GGCC | 4 cut(s) | 1090, 1096, 2220, 2725 |
| Bso31I | GGTCTC | 1 cut(s) | 459 |
| BsoBI | CYCGRG | 1 cut(s) | 2397 |
| Bsp119I | TTCGAA | 1 cut(s) | 167 |
| Bsp120I | GGGCCC | 1 cut(s) | 2218 |
| Bsp1286I | GDGCHC | 5 cut(s) | 179, 1628, 1680, 2222, 2859 |
| Bsp13I | TCCGGA | 1 cut(s) | 1117 |
| Bsp1407I | TGTACA | 1 cut(s) | 2712 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1764, 2520 |
| Bsp19I | CCATGG | 1 cut(s) | 2600 |
| BspANI | GGCC | 4 cut(s) | 1090, 1096, 2220, 2725 |
| BspEI | TCCGGA | 1 cut(s) | 1117 |
| BspFNI | CGCG | 1 cut(s) | 1755 |
| BspLI | GGNNCC | 8 cut(s) | 560, 1275, 1487, 1944, 2018, 2219, 2220, 2828 |
| BspMAI | CTGCAG | 1 cut(s) | 3073 |
| BspMI | ACCTGC | 3 cut(s) | 584, 2651, 2974 |
| BspPI | GGATC | 7 cut(s) | 1389, 1394, 1486, 1510, 2031, 2293, 3071 |
| BspT104I | TTCGAA | 1 cut(s) | 167 |
| BspT107I | GGYRCC | 3 cut(s) | 558, 2016, 2826 |
| BspTNI | GGTCTC | 1 cut(s) | 459 |
| BsrDI | GCAATG | 2 cut(s) | 234, 2375 |
| BsrGI | TGTACA | 1 cut(s) | 2712 |
| BsrI | ACTGG | 8 cut(s) | 575, 682, 891, 1254, 1662, 1746, 2734, 2914 |
| BssECI | CCNNGG | 6 cut(s) | 337, 1091, 1239, 2514, 2600, 2860 |
| BssNI | GRCGYC | 2 cut(s) | 559, 2827 |
| BssSI | CACGAG | 1 cut(s) | 201 |
| BssT1I | CCWWGG | 2 cut(s) | 2600, 2860 |
| Bst2BI | CACGAG | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 8 cut(s) | 339, 1092, 1241, 1896, 2253, 2303, 2501, 2516 |
| Bst4CI | ACNGT | 4 cut(s) | 358, 615, 1634, 1960 |
| Bst6I | CTCTTC | 3 cut(s) | 1197, 1516, 2993 |
| BstACI | GRCGYC | 2 cut(s) | 559, 2827 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1862 |
| BstAUI | TGTACA | 1 cut(s) | 2712 |
| BstBI | TTCGAA | 1 cut(s) | 167 |
| BstC8I | GCNNGC | 4 cut(s) | 365, 1981, 2370, 2825 |
| BstDSI | CCRYGG | 1 cut(s) | 2600 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2423 |
| BstFNI | CGCG | 1 cut(s) | 1755 |
| BstH2I | RGCGCY | 2 cut(s) | 562, 2830 |
| BstHHI | GCGC | 2 cut(s) | 561, 2829 |
| BstMAI | GTCTC | 7 cut(s) | 459, 787, 1143, 1179, 2325, 2818, 2995 |
| BstMCI | CGRYCG | 1 cut(s) | 70 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 92, 145, 873, 1102, 1273, 1561, 1814, 1862 |
| BstNI | CCWGG | 8 cut(s) | 339, 1092, 1241, 1896, 2253, 2303, 2501, 2516 |
| BstNSI | RCATGY | 2 cut(s) | 1586, 2154 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1563 |
| BstSCI | CCNGG | 9 cut(s) | 337, 1090, 1239, 1894, 2019, 2251, 2301, 2499, 2514 |
| BstSFI | CTRYAG | 2 cut(s) | 2571, 3069 |
| BstSLI | GKGCMC | 2 cut(s) | 1628, 2222 |
| BstUI | CGCG | 1 cut(s) | 1755 |
| BstV2I | GAAGAC | 2 cut(s) | 1355, 2703 |
| BstX2I | RGATCY | 5 cut(s) | 511, 1292, 1381, 1478, 2430 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1615, 2252 |
| BstYI | RGATCY | 5 cut(s) | 511, 1292, 1381, 1478, 2430 |
| BsuI | GTATCC | 2 cut(s) | 1738, 2063 |
| BsuRI | GGCC | 4 cut(s) | 1090, 1096, 2220, 2725 |
| BtgI | CCRYGG | 1 cut(s) | 2600 |
| BtgZI | GCGATG | 1 cut(s) | 885 |
| BtsI | GCAGTG | 2 cut(s) | 387, 657 |
| BtsIMutI | CAGTG | 8 cut(s) | 387, 657, 675, 1442, 1639, 1992, 2691, 2993 |
| BveI | ACCTGC | 3 cut(s) | 584, 2651, 2974 |
| Cac8I | GCNNGC | 4 cut(s) | 365, 1981, 2370, 2825 |
| CfoI | GCGC | 2 cut(s) | 561, 2829 |
| Cfr13I | GGNCC | 6 cut(s) | 1094, 1251, 1304, 1486, 2218, 2219 |
| CseI | GACGC | 3 cut(s) | 1553, 1744, 2369 |
| Csp6I | GTAC | 5 cut(s) | 632, 1739, 2017, 2268, 2713 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 559, 594 |
| CviQI | GTAC | 5 cut(s) | 632, 1739, 2017, 2268, 2713 |
| DinI | GGCGCC | 2 cut(s) | 560, 2828 |
| DraI | TTTAAA | 1 cut(s) | 666 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1697 |
| Eam1104I | CTCTTC | 3 cut(s) | 1197, 1516, 2993 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1697 |
| EarI | CTCTTC | 3 cut(s) | 1197, 1516, 2993 |
| EciI | GGCGGA | 1 cut(s) | 146 |
| Ecl136II | GAGCTC | 2 cut(s) | 1678, 2857 |
| Eco130I | CCWWGG | 2 cut(s) | 2600, 2860 |
| Eco24I | GRGCYC | 3 cut(s) | 1680, 2222, 2859 |
| Eco31I | GGTCTC | 1 cut(s) | 459 |
| Eco32I | GATATC | 2 cut(s) | 2167, 3040 |
| Eco47I | GGWCC | 3 cut(s) | 1251, 1304, 1486 |
| Eco53kI | GAGCTC | 2 cut(s) | 1678, 2857 |
| Eco57I | CTGAAG | 3 cut(s) | 261, 2715, 3017 |
| Eco88I | CYCGRG | 1 cut(s) | 2397 |
| EcoICRI | GAGCTC | 2 cut(s) | 1678, 2857 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2423 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1486, 2218, 2219 |
| EcoRI | GAATTC | 1 cut(s) | 2483 |
| EcoRII | CCWGG | 8 cut(s) | 337, 1090, 1239, 1894, 2251, 2301, 2499, 2514 |
| EcoRV | GATATC | 2 cut(s) | 2167, 3040 |
| EcoT14I | CCWWGG | 2 cut(s) | 2600, 2860 |
| EcoT38I | GRGCYC | 3 cut(s) | 1680, 2222, 2859 |
| EgeI | GGCGCC | 2 cut(s) | 560, 2828 |
| EheI | GGCGCC | 2 cut(s) | 560, 2828 |
| ErhI | CCWWGG | 2 cut(s) | 2600, 2860 |
| Esp3I | CGTCTC | 1 cut(s) | 2818 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1326, 1358, 1544, 1576 |
| FaqI | GGGAC | 6 cut(s) | 71, 601, 1222, 1685, 2700, 2878 |
| FauI | CCCGC | 1 cut(s) | 106 |
| FauNDI | CATATG | 2 cut(s) | 102, 1792 |
| FbaI | TGATCA | 3 cut(s) | 1015, 1446, 1989 |
| FblI | GTMKAC | 4 cut(s) | 66, 262, 1579, 2469 |
| FriOI | GRGCYC | 3 cut(s) | 1680, 2222, 2859 |
| GlaI | GCGC | 2 cut(s) | 560, 2828 |
| GsaI | CCCAGC | 1 cut(s) | 2248 |
| GsuI | CTGGAG | 3 cut(s) | 14, 161, 1397 |
| HaeII | RGCGCY | 2 cut(s) | 562, 2830 |
| HaeIII | GGCC | 4 cut(s) | 1090, 1096, 2220, 2725 |
| HapII | CCGG | 4 cut(s) | 42, 712, 1118, 2020 |
| HgaI | GACGC | 3 cut(s) | 1553, 1744, 2369 |
| HhaI | GCGC | 2 cut(s) | 561, 2829 |
| Hin1I | GRCGYC | 2 cut(s) | 559, 2827 |
| Hin6I | GCGC | 2 cut(s) | 559, 2827 |
| HinP1I | GCGC | 2 cut(s) | 559, 2827 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HindIII | AAGCTT | 2 cut(s) | 1265, 1340 |
| HpaII | CCGG | 4 cut(s) | 42, 712, 1118, 2020 |
| HphI | GGTGA | 9 cut(s) | 514, 746, 920, 979, 1119, 2071, 2167, 2849, 2896 |
| Hpy166II | GTNNAC | 7 cut(s) | 67, 263, 928, 1580, 2470, 2739, 2894 |
| Hpy8I | GTNNAC | 7 cut(s) | 67, 263, 928, 1580, 2470, 2739, 2894 |
| Hpy99I | CGWCG | 2 cut(s) | 651, 1760 |
| HpyAV | CCTTC | 6 cut(s) | 265, 1242, 1759, 2498, 2677, 2764 |
| HpyCH4III | ACNGT | 4 cut(s) | 358, 615, 1634, 1960 |
| HpyCH4IV | ACGT | 2 cut(s) | 646, 924 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 92, 145, 873, 1102, 1273, 1561, 1814, 1862 |
| HpySE526I | ACGT | 2 cut(s) | 646, 924 |
| Hsp92I | GRCGYC | 2 cut(s) | 559, 2827 |
| HspAI | GCGC | 2 cut(s) | 559, 2827 |
| KasI | GGCGCC | 2 cut(s) | 558, 2826 |
| Kpn2I | TCCGGA | 1 cut(s) | 1117 |
| KpnI | GGTACC | 1 cut(s) | 2020 |
| Ksp22I | TGATCA | 3 cut(s) | 1015, 1446, 1989 |
| LmnI | GCTCC | 7 cut(s) | 133, 1273, 1366, 1787, 1837, 2854, 2862 |
| LweI | GCATC | 6 cut(s) | 287, 1588, 1843, 2059, 2080, 2934 |
| MaeII | ACGT | 2 cut(s) | 646, 924 |
| MaeIII | GTNAC | 5 cut(s) | 757, 769, 1603, 2173, 2414 |
| MflI | RGATCY | 5 cut(s) | 511, 1292, 1381, 1478, 2430 |
| MhlI | GDGCHC | 5 cut(s) | 179, 1628, 1680, 2222, 2859 |
| Mly113I | GGCGCC | 2 cut(s) | 559, 2827 |
| MlyI | GAGTC | 2 cut(s) | 1244, 2611 |
| MmeI | TCCRAC | 4 cut(s) | 917, 1016, 1225, 2047 |
| MroI | TCCGGA | 1 cut(s) | 1117 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2487, 2566 |
| MseI | TTAA | 7 cut(s) | 309, 408, 665, 954, 1547, 1962, 2666 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2756, 2799, 2835 |
| MspA1I | CMGCKG | 2 cut(s) | 1108, 2360 |
| MspI | CCGG | 4 cut(s) | 42, 712, 1118, 2020 |
| MspR9I | CCNGG | 9 cut(s) | 339, 1092, 1241, 1896, 2021, 2253, 2303, 2501, 2516 |
| MvaI | CCWGG | 8 cut(s) | 339, 1092, 1241, 1896, 2253, 2303, 2501, 2516 |
| MvnI | CGCG | 1 cut(s) | 1755 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 92, 145, 873, 1102, 1273, 1561, 1814, 1862 |
| NarI | GGCGCC | 2 cut(s) | 559, 2827 |
| NciI | CCSGG | 1 cut(s) | 2021 |
| NcoI | CCATGG | 1 cut(s) | 2600 |
| NdeI | CATATG | 2 cut(s) | 102, 1792 |
| NlaIV | GGNNCC | 8 cut(s) | 560, 1275, 1487, 1944, 2018, 2219, 2220, 2828 |
| NmuCI | GTSAC | 3 cut(s) | 757, 769, 2173 |
| NspI | RCATGY | 2 cut(s) | 1586, 2154 |
| NspV | TTCGAA | 1 cut(s) | 167 |
| PaeR7I | CTCGAG | 1 cut(s) | 2397 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 164 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2487, 2566 |
| PfeI | GAWTC | 9 cut(s) | 78, 911, 940, 1121, 1394, 1460, 1571, 1778, 2078 |
| PflFI | GACNNNGTC | 1 cut(s) | 62 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1895, 2013, 2912 |
| PfoI | TCCNGGA | 1 cut(s) | 2499 |
| PleI | GAGTC | 2 cut(s) | 1243, 2611 |
| PluTI | GGCGCC | 2 cut(s) | 562, 2830 |
| PpsI | GAGTC | 2 cut(s) | 1243, 2611 |
| PpuMI | RGGWCCY | 1 cut(s) | 1486 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1563 |
| PshBI | ATTAAT | 2 cut(s) | 408, 1547 |
| Psp124BI | GAGCTC | 2 cut(s) | 1680, 2859 |
| Psp5II | RGGWCCY | 1 cut(s) | 1486 |
| Psp6I | CCWGG | 8 cut(s) | 337, 1090, 1239, 1894, 2251, 2301, 2499, 2514 |
| PspFI | CCCAGC | 1 cut(s) | 2244 |
| PspGI | CCWGG | 8 cut(s) | 337, 1090, 1239, 1894, 2251, 2301, 2499, 2514 |
| PspN4I | GGNNCC | 8 cut(s) | 560, 1275, 1487, 1944, 2018, 2219, 2220, 2828 |
| PspOMI | GGGCCC | 1 cut(s) | 2218 |
| PspPI | GGNCC | 6 cut(s) | 1094, 1251, 1304, 1486, 2218, 2219 |
| PspPPI | RGGWCCY | 1 cut(s) | 1486 |
| PstI | CTGCAG | 1 cut(s) | 3073 |
| PsuI | RGATCY | 5 cut(s) | 511, 1292, 1381, 1478, 2430 |
| PsyI | GACNNNGTC | 1 cut(s) | 62 |
| PvuII | CAGCTG | 2 cut(s) | 1108, 2360 |
| RsaI | GTAC | 5 cut(s) | 633, 1740, 2018, 2269, 2714 |
| RsaNI | GTAC | 5 cut(s) | 632, 1739, 2017, 2268, 2713 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2756, 2799, 2835 |
| SacI | GAGCTC | 2 cut(s) | 1680, 2859 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SaqAI | TTAA | 7 cut(s) | 309, 408, 665, 954, 1547, 1962, 2666 |
| Sau96I | GGNCC | 6 cut(s) | 1094, 1251, 1304, 1486, 2218, 2219 |
| ScaI | AGTACT | 1 cut(s) | 1740 |
| SchI | GAGTC | 2 cut(s) | 1244, 2611 |
| ScrFI | CCNGG | 9 cut(s) | 339, 1092, 1241, 1896, 2021, 2253, 2303, 2501, 2516 |
| SduI | GDGCHC | 5 cut(s) | 179, 1628, 1680, 2222, 2859 |
| SfaNI | GCATC | 6 cut(s) | 287, 1588, 1843, 2059, 2080, 2934 |
| SfcI | CTRYAG | 2 cut(s) | 2571, 3069 |
| SfoI | GGCGCC | 2 cut(s) | 560, 2828 |
| Sfr274I | CTCGAG | 1 cut(s) | 2397 |
| SfuI | TTCGAA | 1 cut(s) | 167 |
| SinI | GGWCC | 3 cut(s) | 1251, 1304, 1486 |
| SlaI | CTCGAG | 1 cut(s) | 2397 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2756, 2799, 2835 |
| SmlI | CTYRAG | 6 cut(s) | 20, 1100, 1969, 2130, 2397, 2929 |
| SmoI | CTYRAG | 6 cut(s) | 20, 1100, 1969, 2130, 2397, 2929 |
| SpeI | ACTAGT | 1 cut(s) | 482 |
| SspDI | GGCGCC | 2 cut(s) | 558, 2826 |
| SspI | AATATT | 1 cut(s) | 1613 |
| SstI | GAGCTC | 2 cut(s) | 1680, 2859 |
| StyD4I | CCNGG | 9 cut(s) | 337, 1090, 1239, 1894, 2019, 2251, 2301, 2499, 2514 |
| StyI | CCWWGG | 2 cut(s) | 2600, 2860 |
| TaaI | ACNGT | 4 cut(s) | 358, 615, 1634, 1960 |
| TaiI | ACGT | 2 cut(s) | 649, 927 |
| TaqI | TCGA | 6 cut(s) | 66, 167, 375, 1557, 2398, 2943 |
| TaqII | GACCGA | 1 cut(s) | 483 |
| TatI | WGTACW | 2 cut(s) | 1738, 2712 |
| TauI | GCSGC | 3 cut(s) | 986, 2251, 2550 |
| TfiI | GAWTC | 9 cut(s) | 78, 911, 940, 1121, 1394, 1460, 1571, 1778, 2078 |
| Tru1I | TTAA | 7 cut(s) | 309, 408, 665, 954, 1547, 1962, 2666 |
| Tru9I | TTAA | 7 cut(s) | 309, 408, 665, 954, 1547, 1962, 2666 |
| TscAI | CASTG | 8 cut(s) | 394, 664, 682, 1449, 1639, 1992, 2698, 3000 |
| TseFI | GTSAC | 3 cut(s) | 757, 769, 2173 |
| Tsp45I | GTSAC | 3 cut(s) | 757, 769, 2173 |
| TspRI | CASTG | 8 cut(s) | 394, 664, 682, 1449, 1639, 1992, 2698, 3000 |
| Tth111I | GACNNNGTC | 1 cut(s) | 62 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1895, 2013, 2912 |
| VpaK11BI | GGWCC | 3 cut(s) | 1251, 1304, 1486 |
| VspI | ATTAAT | 2 cut(s) | 408, 1547 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2423 |
| XapI | RAATTY | 4 cut(s) | 1070, 1661, 2309, 2483 |
| XbaI | TCTAGA | 1 cut(s) | 901 |
| XceI | RCATGY | 2 cut(s) | 1586, 2154 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2309, 2522 |
| XhoI | CTCGAG | 1 cut(s) | 2397 |
| XmaJI | CCTAGG | 1 cut(s) | 2860 |
| XmiI | GTMKAC | 4 cut(s) | 66, 262, 1579, 2469 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2487, 2566 |
| ZrmI | AGTACT | 1 cut(s) | 1740 |