Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0000999

Physical Location & Seq

Genomic Coordinates Forward (+)

51554671 .. 51561737

Gene Structure 7067 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG355700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGACGGACACGACGGACGATATCGCCGAGGAAATCTCGTTCCAGAGCTTCGAAGACGATTGTAAAATGCTCGGCAATCTTCTCCTGGAGGTTTTGCAGCGAGAAGTCGGAGCTCAGATGAGGGAGAAAGTCGACCGCTACAGAACCCTCTCTCAGAGTGCTTGTAGTATGAGGCTGGCGGGGATAGAGGACATGGCGGAGCTCCTGGAGAAGCAGCTAGCGTCGGACATTTCGAATATGAGCTTAGAGGAGGCAATCACTTTCGCTCGTGCTTTCAGCCATTACCTCAATTTGATGGGCATTGCTGAAGTTCATCATAGGGTTCGTAGACAAAAGAATGTGGCATCCCTGTCAAAATCTTGTGATGATATTTTTTATCAGCTTCTGCAGCGTGGAGTTTCCCCGGACCAGCTTTACGAGACCGTTTGCAAGCAGGAGGTTGAGATTGTTCTTACTGCACATCCTACACAAATTAATCGCCGAACCTTACAATACAAACATATCAAACTTTCTCATCTTTTAGATTTAAAAGACCGACCTGATCTTACTACTGAAGAGAGAGATATGGTGATTGAAGATATGGTGCGAGAGATAACTTCTATATGGCAGACAGATGAGCTTAGGCGCCATAAACCCACACCAGTTGATGAAGCTAGCGCAGGTTTGAACATTGTGGAGCAGTCCCTTTGGAAAGCTGTACCTCATTATTTACGTCGTGTCAGCAATGCTTTAAAGAAGGATGGTCCGGAATCTCCAAGATCTCCAATGGCAAAGTCTCCATCCCAGAACTCTCTTCGTAATGCTAGTCTCATTGCCAAAAGGAAAATGTTTGCTGAGTCCCAGGTTGGAAGGTCCAGTTTCCAGAAGCTTTTGGAGCCAAAGCCCACTAAGAGATCTGCAATTGCTCCTTATAGAATTGTTCTTGGTAATATAAAAGACAAGGTTGCTTCTGATGTTAAAGAAGTACTGGATACCTTCCGCATTGCTGCTGAGCTAGGGAGTGATTCGCTTGGAGCATATGTGATTTCTATGGCTTCTAACGCAAGTGATGTCCTTGCTGTGGAGCTTTTGCAAAAAGATGCACGACTTGCCGTTAGTGGAGAAATAGGAAAGCCATGTCCTGGTGGAACGCTGCGTGTGGTTCCTTTGTTTGAAACTGTGAAGGACTTGAGAGGAGCTGGCTCAGTGATCAGGAAATTATTGTCCATTGATTGGTACAGGGAGCACATCATCAAGAACCATAATGGGCATCAAGAGGTGATGGTTGGATACTCTGATTCTGGAAAAGATGCAGGGCGTTTTACTGCTGCGTGGGAACTTTACAAAGCTCAAGAGGATGTTGTAGCTGCATGCAATGAGTATGATATCAAAGTTACCCTGTTTCATGGGAGAGGAGGAAGTATTGGTCGTGGAGGGGGCCCTACATATCTTGCCATTCAATCCCAGCCGCCTGGCTCTGTGATGGTAAACTTTTTGTTTTGCACTCACCAATCTGCTTCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0008964 GO:0009060 GO:0009987 GO:0015980 GO:0016829 GO:0016830 GO:0016831 GO:0016999 GO:0017144 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0055114 GO:0071704 GO:0072350

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

501

Amino Acids

55.92

Weight (kDa)

6.69

Isoelectric Point (pI)

53.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	18 - 251	1.1e-54	Phosphoenolpyruvate carboxylase
PEPcase	PF00311	314 - 488	1.9e-68	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68750
fragaria_vesca	FvH4_3g20961 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350
malus_domestica	MD13G1049200.v1.1 MD16G1050300.v1.1
prunus_persica	Prupe.1G302700_v2.0.a1 Prupe.1G302700_v2.0.a1
pyrus_communis	pycom16g04410
rosa_chinensis	RchiOBHm_Chr1g0330331 RchiOBHm_Chr1g0355581 RchiOBHm_Chr1g0379911 RchiOBHm_Chr4g0407141 RchiOBHm_Chr4g0436201 RchiOBHm_Chr5g0035501 RchiOBHm_Chr5g0035601 RchiOBHm_Chr5g0035681 RchiOBHm_Chr5g0035861 RchiOBHm_Chr5g0063691 RchiOBHm_Chr6g0312331
rosa_laevigata	RLG00000006529 RLG00000033624 RLG00000033642 RLG00000033654
rosa_multiflora	Rmu_sc0000084.1_g000022 Rmu_sc0006173.1_g000008 Rmu_sc0007205.1_g000021 Rmu_sc0014259.1_g000014
rosa_roxburghii	Rroxscaffold_1G00021870 Rroxscaffold_1G00044830 Rroxscaffold_1G00044890 Rroxscaffold_1G00044970 Rroxscaffold_3G00231670 Rroxscaffold_5G00377400 Rroxscaffold_7G00185100
rosa_rugosa	Rorug03G0294000 Rorug04G0292500 Rorug04G0292600 Rorug04G0292600
rosa_samantha	Rh4AG346800 Rh4BG355700 Rh4CG370400 Rh4DG349400 Rh5AG245000 Rh5BG244800 Rh5CG276300 Rh5CG276800 Rh5DG253900 Rh5DG464900 Rh6BG126500
rosa_wichuraiana	Rw1G008440 Rw4G030310 Rw5G022500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	650
AccB1I	GGYRCC	1 cut(s)	624
AccB7I	CCANNNNNTGG	2 cut(s)	1121, 1212
AccI	GTMKAC	2 cut(s)	132, 328
AccIII	TCCGGA	1 cut(s)	745
AciI	CCGC	5 cut(s)	136, 179, 197, 979, 1448
AcuI	CTGAAG	2 cut(s)	327, 573
AcyI	GRCGYC	1 cut(s)	625
AfaI	GTAC	3 cut(s)	699, 966, 1217
AfiI	CCNNNNNNNGG	3 cut(s)	1060, 1121, 1212
AgsI	TTSAA	4 cut(s)	575, 667, 1154, 1439
AjnI	CCWGG	5 cut(s)	84, 204, 840, 1120, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	23, 55
Alw21I	GWGCWC	3 cut(s)	115, 204, 1227
Alw26I	GTCTC	3 cut(s)	413, 780, 812
AlwNI	CAGNNNCTG	1 cut(s)	385
Aor13HI	TCCGGA	1 cut(s)	745
AoxI	GGCC	1 cut(s)	1417
ApaI	GGGCCC	1 cut(s)	1421
ApeKI	GCWGC	7 cut(s)	97, 214, 388, 986, 1132, 1307, 1346
AseI	ATTAAT	1 cut(s)	474
AspLEI	GCGC	2 cut(s)	627, 659
AspS9I	GGNCC	5 cut(s)	406, 743, 852, 1417, 1418
AsuC2I	CCSGG	1 cut(s)	404
AsuHPI	GGTGA	3 cut(s)	580, 1270, 1478
AsuII	TTCGAA	2 cut(s)	51, 233
AsuNHI	GCTAGC	2 cut(s)	217, 653
AvaII	GGWCC	3 cut(s)	406, 743, 852
BaeGI	GKGCMC	1 cut(s)	1421
BanI	GGYRCC	1 cut(s)	624
BanII	GRGCYC	3 cut(s)	115, 204, 1421
BauI	CACGAG	1 cut(s)	267
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	3 cut(s)	115, 204, 1227
BbvI	GCAGC	7 cut(s)	109, 226, 400, 973, 1119, 1294, 1333
BccI	CCATC	5 cut(s)	289, 734, 787, 1255, 1456
BceAI	ACGGC	1 cut(s)	1076
BciT130I	CCWGG	5 cut(s)	86, 206, 842, 1122, 1452
BciVI	GTATCC	2 cut(s)	964, 1262
BclI	TGATCA	1 cut(s)	1188
BcnI	CCSGG	1 cut(s)	404
BcoDI	GTCTC	3 cut(s)	413, 780, 812
BfaI	CTAG	4 cut(s)	218, 654, 804, 995
BfmI	CTRYAG	2 cut(s)	139, 386
BfoI	RGCGCY	1 cut(s)	628
BfuAI	ACCTGC	1 cut(s)	650
BfuI	GTATCC	2 cut(s)	964, 1262
BglII	AGATCT	2 cut(s)	758, 893
BisI	GCNGC	8 cut(s)	98, 215, 389, 987, 1133, 1308, 1347, 1448
BlpI	GCTNAGC	1 cut(s)	990
BlsI	GCNGC	8 cut(s)	99, 216, 390, 988, 1134, 1309, 1348, 1449
BmcAI	AGTACT	1 cut(s)	966
Bme1390I	CCNGG	6 cut(s)	86, 206, 404, 842, 1122, 1452
Bme18I	GGWCC	3 cut(s)	406, 743, 852
BmgT120I	GGNCC	5 cut(s)	406, 743, 852, 1417, 1418
BmiI	GGNNCC	5 cut(s)	626, 876, 1143, 1418, 1419
BmrFI	CCNGG	6 cut(s)	86, 206, 404, 842, 1122, 1452
BmsI	GCATC	4 cut(s)	353, 1069, 1258, 1279
BmtI	GCTAGC	2 cut(s)	221, 657
BpiI	GAAGAC	1 cut(s)	60
BplI	GAGNNNNNCTC	2 cut(s)	20, 52
BpmI	CTGGAG	2 cut(s)	107, 227
Bpu10I	CCTNAGC	1 cut(s)	620
Bpu1102I	GCTNAGC	1 cut(s)	990
Bpu14I	TTCGAA	2 cut(s)	51, 233
BpuEI	CTTGAG	2 cut(s)	1189, 1314
BpuMI	CCSGG	1 cut(s)	404
BsaHI	GRCGYC	1 cut(s)	625
BsaI	GGTCTC	1 cut(s)	413
BsaJI	CCNNGG	3 cut(s)	27, 402, 840
BsaWI	WCCGGW	1 cut(s)	745
BsaXI	ACNNNNNCTCC	2 cut(s)	1005, 1035
Bsc4I	CCNNNNNNNGG	3 cut(s)	1060, 1121, 1212
Bse1I	ACTGG	3 cut(s)	641, 855, 972
Bse3DI	GCAATG	5 cut(s)	300, 730, 810, 981, 1360
BseAI	TCCGGA	1 cut(s)	745
BseBI	CCWGG	5 cut(s)	86, 206, 842, 1122, 1452
BseDI	CCNNGG	3 cut(s)	27, 402, 840
BseGI	GGATG	5 cut(s)	344, 460, 745, 779, 1342
BseLI	CCNNNNNNNGG	3 cut(s)	1060, 1121, 1212
BseMI	GCAATG	5 cut(s)	300, 730, 810, 981, 1360
BseMII	CTCAG	5 cut(s)	128, 167, 825, 981, 1197
BseNI	ACTGG	3 cut(s)	641, 855, 972
BseRI	GAGGAG	3 cut(s)	263, 1188, 1407
BseSI	GKGCMC	1 cut(s)	1421
BseXI	GCAGC	7 cut(s)	109, 226, 400, 973, 1119, 1294, 1333
BseYI	CCCAGC	1 cut(s)	1443
BsgI	GTGCAG	1 cut(s)	441
Bsh1285I	CGRYCG	1 cut(s)	136
BshFI	GGCC	1 cut(s)	1419
BshNI	GGYRCC	1 cut(s)	624
BsiEI	CGRYCG	1 cut(s)	136
BsiHKAI	GWGCWC	3 cut(s)	115, 204, 1227
BsiSI	CCGG	2 cut(s)	404, 746
BslFI	GGGAC	2 cut(s)	667, 823
BslI	CCNNNNNNNGG	3 cut(s)	1060, 1121, 1212
BsmAI	GTCTC	3 cut(s)	413, 780, 812
BsmFI	GGGAC	2 cut(s)	667, 823
BsnI	GGCC	1 cut(s)	1419
Bso31I	GGTCTC	1 cut(s)	413
Bsp119I	TTCGAA	2 cut(s)	51, 233
Bsp120I	GGGCCC	1 cut(s)	1417
Bsp1286I	GDGCHC	4 cut(s)	115, 204, 1227, 1421
Bsp13I	TCCGGA	1 cut(s)	745
Bsp143I	GATC	4 cut(s)	541, 758, 893, 1188
Bsp1720I	GCTNAGC	1 cut(s)	990
BspACI	CCGC	5 cut(s)	136, 179, 197, 979, 1448
BspANI	GGCC	1 cut(s)	1419
BspCNI	CTCAG	5 cut(s)	127, 166, 826, 982, 1196
BspEI	TCCGGA	1 cut(s)	745
BspLI	GGNNCC	5 cut(s)	626, 876, 1143, 1418, 1419
BspMAI	CTGCAG	1 cut(s)	390
BspMI	ACCTGC	1 cut(s)	650
BspOI	GCTAGC	2 cut(s)	221, 657
BspT104I	TTCGAA	2 cut(s)	51, 233
BspT107I	GGYRCC	1 cut(s)	624
BspTNI	GGTCTC	1 cut(s)	413
BsrDI	GCAATG	5 cut(s)	300, 730, 810, 981, 1360
BsrI	ACTGG	3 cut(s)	641, 855, 972
BssECI	CCNNGG	3 cut(s)	27, 402, 840
BssMI	GATC	4 cut(s)	541, 758, 893, 1188
BssNI	GRCGYC	1 cut(s)	625
BssSI	CACGAG	1 cut(s)	267
Bst2BI	CACGAG	1 cut(s)	267
Bst2UI	CCWGG	5 cut(s)	86, 206, 842, 1122, 1452
Bst4CI	ACNGT	2 cut(s)	424, 1159
Bst6I	CTCTTC	2 cut(s)	549, 798
BstACI	GRCGYC	1 cut(s)	625
BstAPI	GCANNNNNTGC	1 cut(s)	1088
BstBI	TTCGAA	2 cut(s)	51, 233
BstC8I	GCNNGC	6 cut(s)	177, 219, 431, 655, 1180, 1351
BstDEI	CTNAG	8 cut(s)	114, 153, 244, 620, 834, 888, 990, 1183
BstF5I	GGATG	5 cut(s)	344, 460, 745, 779, 1342
BstH2I	RGCGCY	1 cut(s)	628
BstHHI	GCGC	2 cut(s)	627, 659
BstKTI	GATC	4 cut(s)	544, 761, 896, 1191
BstMAI	GTCTC	3 cut(s)	413, 780, 812
BstMBI	GATC	4 cut(s)	541, 758, 893, 1188
BstMCI	CGRYCG	1 cut(s)	136
BstMWI	GCNNNNNNNGC	4 cut(s)	388, 874, 1040, 1088
BstNI	CCWGG	5 cut(s)	86, 206, 842, 1122, 1452
BstNSI	RCATGY	1 cut(s)	1353
BstSCI	CCNGG	6 cut(s)	84, 204, 402, 840, 1120, 1450
BstSFI	CTRYAG	2 cut(s)	139, 386
BstSLI	GKGCMC	1 cut(s)	1421
BstV1I	GCAGC	7 cut(s)	109, 226, 400, 973, 1119, 1294, 1333
BstV2I	GAAGAC	1 cut(s)	60
BstX2I	RGATCY	2 cut(s)	758, 893
BstXI	CCANNNNNNTGG	1 cut(s)	1451
BstYI	RGATCY	2 cut(s)	758, 893
BsuI	GTATCC	2 cut(s)	964, 1262
BsuRI	GGCC	1 cut(s)	1419
BtsCI	GGATG	5 cut(s)	344, 460, 745, 779, 1342
BtsIMutI	CAGTG	1 cut(s)	1191
BveI	ACCTGC	1 cut(s)	650
Cac8I	GCNNGC	6 cut(s)	177, 219, 431, 655, 1180, 1351
CaiI	CAGNNNCTG	1 cut(s)	385
CfoI	GCGC	2 cut(s)	627, 659
Cfr13I	GGNCC	5 cut(s)	406, 743, 852, 1417, 1418
CseI	GACGC	1 cut(s)	210
Csp6I	GTAC	3 cut(s)	698, 965, 1216
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviAII	CATG	4 cut(s)	193, 1116, 1350, 1385
CviQI	GTAC	3 cut(s)	698, 965, 1216
DdeI	CTNAG	8 cut(s)	114, 153, 244, 620, 834, 888, 990, 1183
DinI	GGCGCC	1 cut(s)	626
DpnI	GATC	4 cut(s)	543, 760, 895, 1190
DpnII	GATC	4 cut(s)	541, 758, 893, 1188
DraI	TTTAAA	2 cut(s)	528, 732
Eam1104I	CTCTTC	2 cut(s)	549, 798
EarI	CTCTTC	2 cut(s)	549, 798
EciI	GGCGGA	1 cut(s)	212
Ecl136II	GAGCTC	2 cut(s)	113, 202
Eco24I	GRGCYC	3 cut(s)	115, 204, 1421
Eco31I	GGTCTC	1 cut(s)	413
Eco32I	GATATC	2 cut(s)	22, 1366
Eco47I	GGWCC	3 cut(s)	406, 743, 852
Eco53kI	GAGCTC	2 cut(s)	113, 202
Eco57I	CTGAAG	2 cut(s)	327, 573
EcoICRI	GAGCTC	2 cut(s)	113, 202
EcoO109I	RGGNCCY	2 cut(s)	1417, 1418
EcoRII	CCWGG	5 cut(s)	84, 204, 840, 1120, 1450
EcoRV	GATATC	2 cut(s)	22, 1366
EcoT38I	GRGCYC	3 cut(s)	115, 204, 1421
EgeI	GGCGCC	1 cut(s)	626
EheI	GGCGCC	1 cut(s)	626
FaeI	CATG	4 cut(s)	196, 1119, 1353, 1388
FaqI	GGGAC	2 cut(s)	667, 823
FatI	CATG	4 cut(s)	192, 1115, 1349, 1384
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	1 cut(s)	1018
FbaI	TGATCA	1 cut(s)	1188
FblI	GTMKAC	2 cut(s)	132, 328
Fnu4HI	GCNGC	8 cut(s)	98, 215, 389, 987, 1133, 1308, 1347, 1448
FokI	GGATG	5 cut(s)	331, 447, 752, 766, 1349
FriOI	GRGCYC	3 cut(s)	115, 204, 1421
Fsp4HI	GCNGC	8 cut(s)	98, 215, 389, 987, 1133, 1308, 1347, 1448
FspBI	CTAG	4 cut(s)	218, 654, 804, 995
GlaI	GCGC	2 cut(s)	626, 658
GluI	GCNGC	8 cut(s)	98, 215, 389, 987, 1133, 1308, 1347, 1448
GsaI	CCCAGC	1 cut(s)	1447
GsuI	CTGGAG	2 cut(s)	107, 227
HaeII	RGCGCY	1 cut(s)	628
HaeIII	GGCC	1 cut(s)	1419
HapII	CCGG	2 cut(s)	404, 746
HgaI	GACGC	1 cut(s)	210
HhaI	GCGC	2 cut(s)	627, 659
Hin1I	GRCGYC	1 cut(s)	625
Hin1II	CATG	4 cut(s)	196, 1119, 1353, 1388
Hin6I	GCGC	2 cut(s)	625, 657
HinP1I	GCGC	2 cut(s)	625, 657
HincII	GTYRAC	1 cut(s)	133
HindII	GTYRAC	1 cut(s)	133
HindIII	AAGCTT	1 cut(s)	866
HinfI	GANTC	4 cut(s)	749, 836, 1004, 1277
HpaII	CCGG	2 cut(s)	404, 746
HphI	GGTGA	3 cut(s)	580, 1270, 1478
Hpy166II	GTNNAC	3 cut(s)	133, 329, 1468
Hpy188I	TCNGA	6 cut(s)	110, 117, 156, 226, 952, 1276
Hpy188III	TCNNGA	8 cut(s)	43, 746, 862, 1192, 1234, 1253, 1281, 1331
Hpy8I	GTNNAC	3 cut(s)	133, 329, 1468
Hpy99I	CGWCG	3 cut(s)	16, 226, 717
HpyAV	CCTTC	4 cut(s)	730, 843, 985, 1156
HpyCH4III	ACNGT	2 cut(s)	424, 1159
HpyCH4IV	ACGT	1 cut(s)	712
HpyF10VI	GCNNNNNNNGC	4 cut(s)	388, 874, 1040, 1088
HpyF3I	CTNAG	8 cut(s)	114, 153, 244, 620, 834, 888, 990, 1183
HpySE526I	ACGT	1 cut(s)	712
Hsp92I	GRCGYC	1 cut(s)	625
Hsp92II	CATG	4 cut(s)	196, 1119, 1353, 1388
HspAI	GCGC	2 cut(s)	625, 657
KasI	GGCGCC	1 cut(s)	624
Kpn2I	TCCGGA	1 cut(s)	745
Ksp22I	TGATCA	1 cut(s)	1188
Kzo9I	GATC	4 cut(s)	541, 758, 893, 1188
Lsp1109I	GCAGC	7 cut(s)	109, 226, 400, 973, 1119, 1294, 1333
LweI	GCATC	4 cut(s)	353, 1069, 1258, 1279
MaeI	CTAG	4 cut(s)	218, 654, 804, 995
MaeII	ACGT	1 cut(s)	712
MaeIII	GTNAC	1 cut(s)	1372
MalI	GATC	4 cut(s)	543, 760, 895, 1190
MboI	GATC	4 cut(s)	541, 758, 893, 1188
MboII	GAAGA	5 cut(s)	65, 71, 566, 587, 785
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	2 cut(s)	758, 893
MhlI	GDGCHC	4 cut(s)	115, 204, 1227, 1421
MluCI	AATT	5 cut(s)	289, 471, 900, 915, 1196
Mly113I	GGCGCC	1 cut(s)	625
MlyI	GAGTC	1 cut(s)	845
MmeI	TCCRAC	4 cut(s)	88, 204, 826, 1246
MroI	TCCGGA	1 cut(s)	745
MseI	TTAA	5 cut(s)	474, 527, 731, 957, 1504
MspI	CCGG	2 cut(s)	404, 746
MspR9I	CCNGG	6 cut(s)	86, 206, 404, 842, 1122, 1452
MunI	CAATTG	1 cut(s)	900
MvaI	CCWGG	5 cut(s)	86, 206, 842, 1122, 1452
MwoI	GCNNNNNNNGC	4 cut(s)	388, 874, 1040, 1088
NarI	GGCGCC	1 cut(s)	625
NciI	CCSGG	1 cut(s)	404
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	4 cut(s)	541, 758, 893, 1188
NheI	GCTAGC	2 cut(s)	217, 653
NlaIII	CATG	4 cut(s)	196, 1119, 1353, 1388
NlaIV	GGNNCC	5 cut(s)	626, 876, 1143, 1418, 1419
NmeAIII	GCCGAG	2 cut(s)	51, 52
NspI	RCATGY	1 cut(s)	1353
NspV	TTCGAA	2 cut(s)	51, 233
PaeI	GCATGC	1 cut(s)	1353
PcsI	WCGNNNNNNNCGW	2 cut(s)	24, 230
PfeI	GAWTC	3 cut(s)	749, 1004, 1277
PflMI	CCANNNNNTGG	2 cut(s)	1121, 1212
PfoI	TCCNGGA	2 cut(s)	84, 204
PkrI	GCNGC	8 cut(s)	99, 216, 390, 988, 1134, 1309, 1348, 1449
PleI	GAGTC	1 cut(s)	844
PluTI	GGCGCC	1 cut(s)	628
PpsI	GAGTC	1 cut(s)	844
PshBI	ATTAAT	1 cut(s)	474
Psp124BI	GAGCTC	2 cut(s)	115, 204
Psp6I	CCWGG	5 cut(s)	84, 204, 840, 1120, 1450
PspFI	CCCAGC	1 cut(s)	1443
PspGI	CCWGG	5 cut(s)	84, 204, 840, 1120, 1450
PspN4I	GGNNCC	5 cut(s)	626, 876, 1143, 1418, 1419
PspOMI	GGGCCC	1 cut(s)	1417
PspPI	GGNCC	5 cut(s)	406, 743, 852, 1417, 1418
PstI	CTGCAG	1 cut(s)	390
PstNI	CAGNNNCTG	1 cut(s)	385
PsuI	RGATCY	2 cut(s)	758, 893
RsaI	GTAC	3 cut(s)	699, 966, 1217
RsaNI	GTAC	3 cut(s)	698, 965, 1216
SacI	GAGCTC	2 cut(s)	115, 204
SalI	GTCGAC	1 cut(s)	131
SaqAI	TTAA	5 cut(s)	474, 527, 731, 957, 1504
SatI	GCNGC	8 cut(s)	98, 215, 389, 987, 1133, 1308, 1347, 1448
Sau3AI	GATC	4 cut(s)	541, 758, 893, 1188
Sau96I	GGNCC	5 cut(s)	406, 743, 852, 1417, 1418
ScaI	AGTACT	1 cut(s)	966
SchI	GAGTC	1 cut(s)	845
ScrFI	CCNGG	6 cut(s)	86, 206, 404, 842, 1122, 1452
SduI	GDGCHC	4 cut(s)	115, 204, 1227, 1421
SfaNI	GCATC	4 cut(s)	353, 1069, 1258, 1279
SfcI	CTRYAG	2 cut(s)	139, 386
SfoI	GGCGCC	1 cut(s)	626
SfuI	TTCGAA	2 cut(s)	51, 233
SinI	GGWCC	3 cut(s)	406, 743, 852
SmlI	CTYRAG	2 cut(s)	1168, 1329
SmoI	CTYRAG	2 cut(s)	1168, 1329
SphI	GCATGC	1 cut(s)	1353
Sse9I	AATT	5 cut(s)	289, 471, 900, 915, 1196
SsiI	CCGC	5 cut(s)	136, 179, 197, 979, 1448
SspDI	GGCGCC	1 cut(s)	624
SspMI	CTAG	4 cut(s)	218, 654, 804, 995
SstI	GAGCTC	2 cut(s)	115, 204
StyD4I	CCNGG	6 cut(s)	84, 204, 402, 840, 1120, 1450
TaaI	ACNGT	2 cut(s)	424, 1159
TaiI	ACGT	1 cut(s)	715
TaqI	TCGA	3 cut(s)	51, 132, 233
TaqII	GACCGA	1 cut(s)	549
TasI	AATT	5 cut(s)	289, 471, 900, 915, 1196
TatI	WGTACW	1 cut(s)	964
TauI	GCSGC	1 cut(s)	1450
TfiI	GAWTC	3 cut(s)	749, 1004, 1277
Tru1I	TTAA	5 cut(s)	474, 527, 731, 957, 1504
Tru9I	TTAA	5 cut(s)	474, 527, 731, 957, 1504
TscAI	CASTG	1 cut(s)	1191
TseI	GCWGC	7 cut(s)	97, 214, 388, 986, 1132, 1307, 1346
TspDTI	ATGAA	4 cut(s)	302, 663, 1373, 1488
TspGWI	ACGGA	2 cut(s)	20, 29
TspRI	CASTG	1 cut(s)	1191
Van91I	CCANNNNNTGG	2 cut(s)	1121, 1212
VpaK11BI	GGWCC	3 cut(s)	406, 743, 852
VspI	ATTAAT	1 cut(s)	474
XceI	RCATGY	1 cut(s)	1353
XmiI	GTMKAC	2 cut(s)	132, 328
XspI	CTAG	4 cut(s)	218, 654, 804, 995
ZrmI	AGTACT	1 cut(s)	966

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.