Prupe.1G302700_v2.0.a1

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29707931 .. 29715477
7547 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G302700.2

Sequence Viewer

Length: 3141 bp
ATGACGGACACGACGGATGACATAGCAGAGGAAATCTCGTTCCAGAGCTTCCAGGACGATTGTAGAATGCTGGGCAGCCTTCTTCAAGAAGTGTTGCAGCGAGAGGTCCGCAGCGAAATCATGGAGAAAGTTGAAAGGACCCGAATCCTCGCTCAGAGTGCTTGTAATATGAGGATAGCGGGGATAGTGGACATTGCGGACGTCCTGGAGAAGCAGCTGGCGTCAGAAATGTCGAAGATGGGCTTAGAAGAGGCTTTGGTCCTCGCTCGCACTTTCAGCCATTACCTCAATTTGATGGGCATTGCCGAAACCCATCACAGGGTTCGCAAGCAACGAAATGACTCAAATGAGGCATCTCTTGCAAAATCTTGTGATGATATTTTTAATCAGCTCGTGCATGGTGGTTTTTCCCCAGATGATCTTTATAATAATGTCTGCAACCAGAAGGTTGAAATTGTTCTTACTGCACATCCTACACAAATTAATCGCCGTACCTTGCAATACAAACACATAAGAATTGCTCATCTTTTAGATTACAAGGGCCGACCTGAAATTACTAATGAAGACAAAGAAATGCTGATTGAAGATCTGGTGAGAGAGATAACTTCGATATGGCAGACAGATGAGCTTAGGCGCCATAAACCTACACCGGTTGATGAAGCAAGGGCAGGTTTGAACATTGTGGAGCAGTCCCTTTGGACAGCTGTACCTCATTATTTACGTCGAGTTAGCAATGCTTTAAAGAAGCATACCGGAAAACCACTTCCATTAACTTGCACACCAATCAAGTTTGGGTCTTGGATGGGGGGTGATAGAGATGGAAATCCTAATGTAACAGCAAAGGTCACAAAAGATGTCTCACTTTTATCTAGGTGGATGGCTATTGATCTCTACATCCGAGAAGTTGATCACCTCAAGTTTGAATTATCCATGAATCGGTGCAGTGATAGATTGTCAAGACTGGCAGATGAAATTTTAGAGCAAGAAACTTCATCTGAGGATCGGCAAGAGAGTTGGAATCAGTGTTTTGGTAGACATCAGTTGAACTTGAAGCAACAGGGTGGGACCCTTCCAACACAACTTCCAGCTAGAGCTGATCAACCCTCTTGCACTGAATGCATTCCCAGAATTGAACTTCCACGGACTGATTATATGCTGCCGAATCATCAGGGTGGTCAGGCTCAGGACTCTCCAATCTCAGATCCTTCATCCCAGAATCCCCTTCACAATGGGCATATGATAAAAAATGGATCTCCAGGGTCTGCCTCTCGTAGTTCTAGTCAACTGCTTACTCAAAGGAAAATGTTTGCAGAATCCCAGGTTGGAAGGTCCAGTTTCCGAAAGCTTTTAGAGCCAATGCCCCCTCAGAGACCTGGAGTTCCTCCGTATAGAGTTGTTCTTGGTAATGTTAAAGACAAGCTTATGAAGACACAAAGACGATTGGAGCTGCTTCTTGAAAATCTTCCTTGTGAGTACAATACATGGGATTGTTATGATACGACAGACCAACTTTTAGAACCGCTGCTCCTATGCTATGAATCTTTGCAATCATGTGGATCTGGAGTGCTAGCTGACGGTCGACTTGCTGATCTGATCCGAAGAGTTGCTACCTTTGGGATGGTATTAATGAAGCTCGACTTGCGTCAGGAATCTGGTAGACATGCTGAGACATTTGATGCAATTACCAAATATTTGGAGATGGGTACATACAGTGAGTGGGAAGAAGAAAAGAAACTGGAATTTCTTGCAAGAGAGCTCAAAGGGAAGAGGCCGCTAGTCCCACCAAGCATGGAGGTTTCTCCTGATATTAGAGAAGTACTGGATACCTTTCGTGTAGCTGCTGAGCTAGGGAGTGAATCACTTGGAGCCTATGTGATTTCTATGGCGTCACGTGCAAGTGATGTCCTTGCTGTGGAGCTTTTGCAGAAAGATGCACGACTTTCTGTTAGTGGGGAGATTGGAAGGCCATGTCCAGGCGGAACGCTGCGGGTGGTTCCTCTGTTTGAAACTGTGAAGGACTTGAGAGGAGCTGGCTCAGTGATCAGGAAATTATTATCCATTGATTGGTACCGGAAACACATAATCAAGAGCCATAATGGGCTTCAAGAGGTGATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGACGATTTACTGCAGCATGGGAACTTTACAAAGCTCAAGAGGATGTTGTGGCTGCATGCAATGAATATGGTATTAAGGTTACTCTGTTCCACGGGCGAGGGGGAAGTATTGGTCGTGGAGGTGGCCCTACATATCTTGCCATTCAATCCCAGCCGCCTGGCTCTGTTATGGGTAGCCTACGGTCAACTGAGCAAGGAGAGATGGTTCAGGCAAAATTTGGGCTGCCACAAACTGCTGTCAGGCAGCTAGAGATCTACACGACAGCTGTGCTGCTCGCAACCATGCGCCCTCCACTCTCACCTCGGGAAGAAAAGTGGCGTAACCTCATGGAGGAGATCTCAAAAATCAGTTGCCAGAACTATCAGAGCGTAGTCTACGAAAATCCAGAGTTCCTTGCCTACTTCCACGAGGCTACGCCCCAGGCTGAGCTTGGCTTCCTCAACATAGGAAGCCGCCCCACAAGAAGAAAGAGCTCTACAGGAATTGGACATCTTCGTGCAATTCCATGGGTGTTTGCATGGACCCAAACCAGATTTGTTCTTCCGTCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGGGTTTGTGAAAAGGGACACACTGAAGACTTAAAAGCTATGTACAAAGAGTGGCCTTTCTTTCAGTGTACCCTTGACCTTATAGAGATGGTTTTAGGGAAGGCAGACACTCCTATAGCCAAACGCTACGATGAAGCCCTTGTCTCAGAAAGCAGGCAACACATTGGTTCTGAACTGAGAAAGGAGCTCTTAACGACAGAGAAGTATGTACTGGTGGTTAGCGGGCATGAGAAGCTATCTGGGAATAATCGGAGCTTGAGGAAGCTGATTGAGAGCAGGCTTCCCTTTCTCAATCCTCTGAACATGTTGCAGGTTGAGGTACTCAAGAGATTGAGAAGTGACGACGATAACAATAAACTCAGAGATGCATTGCTCATCACAATAAATGGGATCGCTGCGGGGATGAGAAATACAGGCTAA

Protein Analysis

1047

Amino Acids

117.83

Weight (kDa)

6.81

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
AatII GACGTC 1 cut(s) 204
Acc36I ACCTGC 3 cut(s) 659, 2702, 3022
Acc65I GGTACC 1 cut(s) 2067
AccB1I GGYRCC 2 cut(s) 633, 2067
AccB7I CCANNNNNTGG 1 cut(s) 2064
AccI GTMKAC 4 cut(s) 1033, 1579, 1657, 2520
AclWI GGATC 6 cut(s) 1008, 1196, 1258, 1564, 1588, 3119
AcsI RAATTY 3 cut(s) 972, 1739, 2360
AcuI CTGAAG 1 cut(s) 2766
AcvI CACGTG 1 cut(s) 1892
AcyI GRCGYC 4 cut(s) 201, 221, 634, 1886
AfiI CCNNNNNNNGG 7 cut(s) 318, 319, 936, 1912, 1973, 2064, 2476
AflIII ACRYGT 1 cut(s) 3024
AgeI ACCGGT 1 cut(s) 649
AjnI CCWGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
AloI GAACNNNNNNTCC 6 cut(s) 23, 55, 1509, 1541, 2334, 2366
Alw21I GWGCWC 3 cut(s) 1758, 2621, 2910
Alw26I GTCTC 4 cut(s) 862, 1363, 1661, 2869
AlwI GGATC 6 cut(s) 1008, 1196, 1258, 1564, 1588, 3119
AlwNI CAGNNNCTG 1 cut(s) 1262
Ama87I CYCGRG 1 cut(s) 2448
AoxI GGCC 5 cut(s) 541, 1769, 1964, 2269, 2774
ApoI RAATTY 3 cut(s) 972, 1739, 2360
AseI ATTAAT 2 cut(s) 483, 1625
AsiGI ACCGGT 1 cut(s) 649
Asp700I GAANNNNTTC 3 cut(s) 456, 1119, 1461
Asp718I GGTACC 1 cut(s) 2067
AspLEI GCGC 2 cut(s) 636, 2433
AspS9I GGNCC 8 cut(s) 106, 138, 259, 541, 1065, 1329, 2270, 2667
AsuHPI GGTGA 5 cut(s) 604, 821, 902, 2122, 2436
AsuNHI GCTAGC 1 cut(s) 1567
AvaI CYCGRG 1 cut(s) 2448
AvaII GGWCC 6 cut(s) 106, 138, 259, 1065, 1329, 2667
BaeI ACNNNNGTAYC 2 cut(s) 690, 723
BanI GGYRCC 2 cut(s) 633, 2067
BanII GRGCYC 3 cut(s) 1758, 2621, 2910
BarI GAAGNNNNNNTAC 2 cut(s) 1591, 1623
BauI CACGAG 2 cut(s) 392, 2552
BbrPI CACGTG 1 cut(s) 1892
BbsI GAAGAC 3 cut(s) 570, 1433, 2754
Bbv12I GWGCWC 3 cut(s) 1758, 2621, 2910
BceAI ACGGC 1 cut(s) 474
BcgI CGANNNNNNTGC 2 cut(s) 2395, 2429
BciT130I CCWGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
BciVI GTATCC 1 cut(s) 1816
BclI TGATCA 3 cut(s) 907, 1096, 2040
BcoDI GTCTC 4 cut(s) 862, 1363, 1661, 2869
BfaI CTAG 7 cut(s) 870, 1089, 1278, 1568, 1775, 1847, 2393
BfmI CTRYAG 3 cut(s) 2157, 2622, 2835
BfoI RGCGCY 1 cut(s) 637
BfuAI ACCTGC 3 cut(s) 659, 2702, 3022
BfuI GTATCC 1 cut(s) 1816
BglII AGATCT 3 cut(s) 586, 2397, 2481
BlpI GCTNAGC 2 cut(s) 1842, 2571
BmcAI AGTACT 1 cut(s) 1818
Bme1390I CCNGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
Bme18I GGWCC 6 cut(s) 106, 138, 259, 1065, 1329, 2667
BmeT110I CYCGRG 1 cut(s) 2448
BmgT120I GGNCC 8 cut(s) 106, 138, 259, 541, 1065, 1329, 2270, 2667
BmiI GGNNCC 8 cut(s) 140, 635, 1066, 1067, 1867, 1995, 2069, 2669
BmrFI CCNGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
BmsI GCATC 5 cut(s) 362, 1666, 1921, 2131, 3076
BmtI GCTAGC 1 cut(s) 1571
BoxI GACNNNNGTC 1 cut(s) 1641
BpiI GAAGAC 3 cut(s) 570, 1433, 2754
BplI GAGNNNNNCTC 4 cut(s) 20, 52, 2468, 2500
BpmI CTGGAG 4 cut(s) 227, 1239, 1395, 1581
Bpu10I CCTNAGC 2 cut(s) 629, 1182
Bpu1102I GCTNAGC 2 cut(s) 1842, 2571
BpuEI CTTGAG 5 cut(s) 899, 2041, 2166, 2998, 3029
BsaAI YACGTR 1 cut(s) 1892
BsaBI GATNNNNATC 1 cut(s) 822
BsaHI GRCGYC 4 cut(s) 201, 221, 634, 1886
BsaI GGTCTC 1 cut(s) 1363
BsaJI CCNNGG 7 cut(s) 1139, 1256, 1317, 2236, 2447, 2565, 2651
BsaWI WCCGGW 3 cut(s) 649, 752, 2070
BsaXI ACNNNNNCTCC 6 cut(s) 1509, 1539, 1857, 1887, 2334, 2364
Bsc4I CCNNNNNNNGG 7 cut(s) 318, 319, 936, 1912, 1973, 2064, 2476
Bse118I RCCGGY 1 cut(s) 649
Bse1I ACTGG 5 cut(s) 966, 1332, 1740, 1824, 2937
Bse3DI GCAATG 5 cut(s) 192, 300, 739, 2212, 3089
Bse8I GATNNNNATC 1 cut(s) 822
BseBI CCWGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
BseDI CCNNGG 7 cut(s) 1139, 1256, 1317, 2236, 2447, 2565, 2651
BseGI GGATG 9 cut(s) 22, 469, 807, 882, 894, 1208, 1623, 2194, 3129
BseJI GATNNNNATC 1 cut(s) 822
BseLI CCNNNNNNNGG 7 cut(s) 318, 319, 936, 1912, 1973, 2064, 2476
BseMI GCAATG 5 cut(s) 192, 300, 739, 2212, 3089
BseNI ACTGG 5 cut(s) 966, 1332, 1740, 1824, 2937
BseRI GAGGAG 2 cut(s) 2040, 2492
BseYI CCCAGC 2 cut(s) 70, 2295
BsgI GTGCAG 2 cut(s) 450, 961
Bsh1285I CGRYCG 1 cut(s) 1579
BshFI GGCC 5 cut(s) 543, 1771, 1966, 2271, 2776
BshNI GGYRCC 2 cut(s) 633, 2067
BshTI ACCGGT 1 cut(s) 649
BsiEI CGRYCG 1 cut(s) 1579
BsiHKAI GWGCWC 3 cut(s) 1758, 2621, 2910
BsiHKCI CYCGRG 1 cut(s) 2448
BsiSI CCGG 3 cut(s) 650, 753, 2071
BslFI GGGAC 4 cut(s) 676, 1078, 1763, 2751
BslI CCNNNNNNNGG 7 cut(s) 318, 319, 936, 1912, 1973, 2064, 2476
BsmAI GTCTC 4 cut(s) 862, 1363, 1661, 2869
BsmFI GGGAC 4 cut(s) 676, 1078, 1763, 2751
BsmI GAATGC 3 cut(s) 72, 1119, 1121
BsnI GGCC 5 cut(s) 543, 1771, 1966, 2271, 2776
Bso31I GGTCTC 1 cut(s) 1363
BsoBI CYCGRG 1 cut(s) 2448
Bsp1286I GDGCHC 3 cut(s) 1758, 2621, 2910
Bsp1407I TGTACA 1 cut(s) 2763
Bsp1720I GCTNAGC 2 cut(s) 1842, 2571
Bsp19I CCATGG 1 cut(s) 2651
BspANI GGCC 5 cut(s) 543, 1771, 1966, 2271, 2776
BspLI GGNNCC 8 cut(s) 140, 635, 1066, 1067, 1867, 1995, 2069, 2669
BspMAI CTGCAG 1 cut(s) 2161
BspMI ACCTGC 3 cut(s) 659, 2702, 3022
BspOI GCTAGC 1 cut(s) 1571
BspPI GGATC 6 cut(s) 1008, 1196, 1258, 1564, 1588, 3119
BspT107I GGYRCC 2 cut(s) 633, 2067
BspTNI GGTCTC 1 cut(s) 1363
BsrDI GCAATG 5 cut(s) 192, 300, 739, 2212, 3089
BsrFI RCCGGY 1 cut(s) 649
BsrGI TGTACA 1 cut(s) 2763
BsrI ACTGG 5 cut(s) 966, 1332, 1740, 1824, 2937
BssAI RCCGGY 1 cut(s) 649
BssECI CCNNGG 7 cut(s) 1139, 1256, 1317, 2236, 2447, 2565, 2651
BssNI GRCGYC 4 cut(s) 201, 221, 634, 1886
BssSI CACGAG 2 cut(s) 392, 2552
BssT1I CCWWGG 1 cut(s) 2651
Bst2BI CACGAG 2 cut(s) 392, 2552
Bst2UI CCWGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
Bst4CI ACNGT 4 cut(s) 1577, 1712, 2011, 2328
Bst6I CTCTTC 3 cut(s) 243, 1594, 1760
BstACI GRCGYC 4 cut(s) 201, 221, 634, 1886
BstAPI GCANNNNNTGC 2 cut(s) 359, 1116
BstAUI TGTACA 1 cut(s) 2763
BstBAI YACGTR 1 cut(s) 1892
BstDSI CCRYGG 3 cut(s) 1139, 2236, 2651
BstENI CCTNNNNNAGG 1 cut(s) 2474
BstF5I GGATG 9 cut(s) 22, 469, 807, 882, 894, 1208, 1623, 2194, 3129
BstH2I RGCGCY 1 cut(s) 637
BstHHI GCGC 2 cut(s) 636, 2433
BstMAI GTCTC 4 cut(s) 862, 1363, 1661, 2869
BstMCI CGRYCG 1 cut(s) 1579
BstMWI GCNNNNNNNGC 8 cut(s) 158, 276, 359, 1116, 1351, 1639, 1892, 2953
BstNI CCWGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
BstNSI RCATGY 3 cut(s) 1664, 2205, 3028
BstPAI GACNNNNGTC 1 cut(s) 1641
BstSCI CCNGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
BstSFI CTRYAG 3 cut(s) 2157, 2622, 2835
BstV2I GAAGAC 3 cut(s) 570, 1433, 2754
BstX2I RGATCY 6 cut(s) 586, 1201, 1250, 1556, 2397, 2481
BstXI CCANNNNNNTGG 2 cut(s) 1693, 2303
BstYI RGATCY 6 cut(s) 586, 1201, 1250, 1556, 2397, 2481
BsuI GTATCC 1 cut(s) 1816
BsuRI GGCC 5 cut(s) 543, 1771, 1966, 2271, 2776
BtgI CCRYGG 3 cut(s) 1139, 2236, 2651
BtsCI GGATG 9 cut(s) 22, 469, 807, 882, 894, 1208, 1623, 2194, 3129
BtsI GCAGTG 1 cut(s) 949
BtsIMutI CAGTG 7 cut(s) 949, 1028, 1110, 1717, 2043, 2742, 2792
BveI ACCTGC 3 cut(s) 659, 2702, 3022
CaiI CAGNNNCTG 1 cut(s) 1262
CfoI GCGC 2 cut(s) 636, 2433
Cfr10I RCCGGY 1 cut(s) 649
Cfr13I GGNCC 8 cut(s) 106, 138, 259, 541, 1065, 1329, 2270, 2667
CseI GACGC 3 cut(s) 210, 1631, 1875
CspAI ACCGGT 1 cut(s) 649
DinI GGCGCC 1 cut(s) 635
DraI TTTAAA 2 cut(s) 741, 2718
Eam1104I CTCTTC 3 cut(s) 243, 1594, 1760
EarI CTCTTC 3 cut(s) 243, 1594, 1760
EciI GGCGGA 1 cut(s) 1992
Ecl136II GAGCTC 3 cut(s) 1756, 2619, 2908
Eco130I CCWWGG 1 cut(s) 2651
Eco24I GRGCYC 3 cut(s) 1758, 2621, 2910
Eco31I GGTCTC 1 cut(s) 1363
Eco47I GGWCC 6 cut(s) 106, 138, 259, 1065, 1329, 2667
Eco53kI GAGCTC 3 cut(s) 1756, 2619, 2908
Eco57I CTGAAG 1 cut(s) 2766
Eco72I CACGTG 1 cut(s) 1892
Eco88I CYCGRG 1 cut(s) 2448
EcoICRI GAGCTC 3 cut(s) 1756, 2619, 2908
EcoNI CCTNNNNNAGG 1 cut(s) 2474
EcoO109I RGGNCCY 2 cut(s) 138, 1065
EcoRII CCWGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
EcoT14I CCWWGG 1 cut(s) 2651
EcoT22I ATGCAT 2 cut(s) 1121, 3091
EcoT38I GRGCYC 3 cut(s) 1758, 2621, 2910
EgeI GGCGCC 1 cut(s) 635
EheI GGCGCC 1 cut(s) 635
ErhI CCWWGG 1 cut(s) 2651
FalI AAGNNNNNCTT 8 cut(s) 227, 259, 1404, 1436, 1622, 1654, 2894, 2926
FaqI GGGAC 4 cut(s) 676, 1078, 1763, 2751
FauI CCCGC 4 cut(s) 172, 1980, 2936, 3112
FauNDI CATATG 1 cut(s) 1236
FbaI TGATCA 3 cut(s) 907, 1096, 2040
FblI GTMKAC 4 cut(s) 1033, 1579, 1657, 2520
FokI GGATG 9 cut(s) 29, 456, 814, 881, 889, 1195, 1630, 2201, 3136
FriOI GRGCYC 3 cut(s) 1758, 2621, 2910
FspBI CTAG 7 cut(s) 870, 1089, 1278, 1568, 1775, 1847, 2393
GlaI GCGC 2 cut(s) 635, 2432
GsaI CCCAGC 2 cut(s) 74, 2299
GsuI CTGGAG 4 cut(s) 227, 1239, 1395, 1581
HaeII RGCGCY 1 cut(s) 637
HaeIII GGCC 5 cut(s) 543, 1771, 1966, 2271, 2776
HapII CCGG 3 cut(s) 650, 753, 2071
HgaI GACGC 3 cut(s) 210, 1631, 1875
HhaI GCGC 2 cut(s) 636, 2433
Hin1I GRCGYC 4 cut(s) 201, 221, 634, 1886
Hin6I GCGC 2 cut(s) 634, 2431
HinP1I GCGC 2 cut(s) 634, 2431
HincII GTYRAC 3 cut(s) 1283, 1580, 2331
HindII GTYRAC 3 cut(s) 1283, 1580, 2331
HindIII AAGCTT 2 cut(s) 1343, 1418
HpaII CCGG 3 cut(s) 650, 753, 2071
HphI GGTGA 5 cut(s) 604, 821, 902, 2122, 2436
Hpy166II GTNNAC 8 cut(s) 190, 1034, 1283, 1580, 1658, 2331, 2521, 2790
Hpy8I GTNNAC 8 cut(s) 190, 1034, 1283, 1580, 1658, 2331, 2521, 2790
Hpy99I CGWCG 3 cut(s) 16, 726, 3068
HpyAV CCTTC 9 cut(s) 89, 439, 1079, 1215, 1232, 1320, 1956, 2008, 2815
HpyCH4III ACNGT 4 cut(s) 1577, 1712, 2011, 2328
HpyCH4IV ACGT 3 cut(s) 201, 721, 1891
HpyF10VI GCNNNNNNNGC 8 cut(s) 158, 276, 359, 1116, 1351, 1639, 1892, 2953
HpySE526I ACGT 3 cut(s) 201, 721, 1891
Hsp92I GRCGYC 4 cut(s) 201, 221, 634, 1886
HspAI GCGC 2 cut(s) 634, 2431
KasI GGCGCC 1 cut(s) 633
KflI GGGWCCC 1 cut(s) 1065
KpnI GGTACC 1 cut(s) 2071
Ksp22I TGATCA 3 cut(s) 907, 1096, 2040
LmnI GCTCC 9 cut(s) 685, 1444, 1530, 1865, 1915, 2027, 2708, 2905, 2973
LweI GCATC 5 cut(s) 362, 1666, 1921, 2131, 3076
MaeI CTAG 7 cut(s) 870, 1089, 1278, 1568, 1775, 1847, 2393
MaeII ACGT 3 cut(s) 201, 721, 1891
MaeIII GTNAC 6 cut(s) 832, 844, 1887, 2224, 2465, 3059
MflI RGATCY 6 cut(s) 586, 1201, 1250, 1556, 2397, 2481
MhlI GDGCHC 3 cut(s) 1758, 2621, 2910
Mly113I GGCGCC 1 cut(s) 634
MlyI GAGTC 2 cut(s) 335, 1181
MmeI TCCRAC 5 cut(s) 995, 1097, 1303, 2098, 2686
Mph1103I ATGCAT 2 cut(s) 1121, 3091
MroXI GAANNNNTTC 3 cut(s) 456, 1119, 1461
MslI CAYNNNNRTG 2 cut(s) 1170, 2640
MspA1I CMGCKG 4 cut(s) 217, 704, 1522, 2411
MspI CCGG 3 cut(s) 650, 753, 2071
MspR9I CCNGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
Mva1269I GAATGC 3 cut(s) 72, 1119, 1121
MvaI CCWGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
MwoI GCNNNNNNNGC 8 cut(s) 158, 276, 359, 1116, 1351, 1639, 1892, 2953
NarI GGCGCC 1 cut(s) 634
NcoI CCATGG 1 cut(s) 2651
NdeI CATATG 1 cut(s) 1236
NheI GCTAGC 1 cut(s) 1567
NlaIV GGNNCC 8 cut(s) 140, 635, 1066, 1067, 1867, 1995, 2069, 2669
NmuCI GTSAC 3 cut(s) 844, 1887, 3059
NsiI ATGCAT 2 cut(s) 1121, 3091
NspI RCATGY 3 cut(s) 1664, 2205, 3028
PaeI GCATGC 1 cut(s) 2205
PciI ACATGT 1 cut(s) 3024
PcsI WCGNNNNNNNCGW 1 cut(s) 331
PctI GAATGC 3 cut(s) 72, 1119, 1121
PdmI GAANNNNTTC 3 cut(s) 456, 1119, 1461
PflMI CCANNNNNTGG 1 cut(s) 2064
PfoI TCCNGGA 2 cut(s) 51, 204
PinAI ACCGGT 1 cut(s) 649
PleI GAGTC 2 cut(s) 335, 1181
PluTI GGCGCC 1 cut(s) 637
PmaCI CACGTG 1 cut(s) 1892
PmlI CACGTG 1 cut(s) 1892
PpsI GAGTC 2 cut(s) 335, 1181
Ppu21I YACGTR 1 cut(s) 1892
PpuMI RGGWCCY 2 cut(s) 138, 1065
PscI ACATGT 1 cut(s) 3024
PshAI GACNNNNGTC 1 cut(s) 1641
PshBI ATTAAT 2 cut(s) 483, 1625
PsiI TTATAA 1 cut(s) 426
Psp124BI GAGCTC 3 cut(s) 1758, 2621, 2910
Psp5II RGGWCCY 2 cut(s) 138, 1065
Psp6I CCWGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
PspCI CACGTG 1 cut(s) 1892
PspFI CCCAGC 2 cut(s) 70, 2295
PspGI CCWGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
PspN4I GGNNCC 8 cut(s) 140, 635, 1066, 1067, 1867, 1995, 2069, 2669
PspPI GGNCC 8 cut(s) 106, 138, 259, 541, 1065, 1329, 2270, 2667
PspPPI RGGWCCY 2 cut(s) 138, 1065
PstI CTGCAG 1 cut(s) 2161
PstNI CAGNNNCTG 1 cut(s) 1262
PsuI RGATCY 6 cut(s) 586, 1201, 1250, 1556, 2397, 2481
PvuII CAGCTG 3 cut(s) 217, 704, 2411
RseI CAYNNNNRTG 2 cut(s) 1170, 2640
SacI GAGCTC 3 cut(s) 1758, 2621, 2910
SalI GTCGAC 1 cut(s) 1578
Sau96I GGNCC 8 cut(s) 106, 138, 259, 541, 1065, 1329, 2270, 2667
ScaI AGTACT 1 cut(s) 1818
SchI GAGTC 2 cut(s) 335, 1181
ScrFI CCNGG 8 cut(s) 53, 206, 1257, 1319, 1374, 1974, 2304, 2567
SduI GDGCHC 3 cut(s) 1758, 2621, 2910
SfaNI GCATC 5 cut(s) 362, 1666, 1921, 2131, 3076
SfcI CTRYAG 3 cut(s) 2157, 2622, 2835
SfoI GGCGCC 1 cut(s) 635
SinI GGWCC 6 cut(s) 106, 138, 259, 1065, 1329, 2667
SmiMI CAYNNNNRTG 2 cut(s) 1170, 2640
SmlI CTYRAG 5 cut(s) 914, 2020, 2181, 2977, 3044
SmoI CTYRAG 5 cut(s) 914, 2020, 2181, 2977, 3044
SphI GCATGC 1 cut(s) 2205
SspDI GGCGCC 1 cut(s) 633
SspI AATATT 1 cut(s) 1691
SspMI CTAG 7 cut(s) 870, 1089, 1278, 1568, 1775, 1847, 2393
SstI GAGCTC 3 cut(s) 1758, 2621, 2910
StyD4I CCNGG 8 cut(s) 51, 204, 1255, 1317, 1372, 1972, 2302, 2565
StyI CCWWGG 1 cut(s) 2651
TaaI ACNGT 4 cut(s) 1577, 1712, 2011, 2328
TaiI ACGT 3 cut(s) 204, 724, 1894
TaqI TCGA 5 cut(s) 233, 608, 724, 1579, 1635
TatI WGTACW 4 cut(s) 1473, 1816, 2763, 2929
TauI GCSGC 3 cut(s) 1774, 2302, 2601
TscAI CASTG 7 cut(s) 949, 1028, 1117, 1717, 2043, 2749, 2792
TseFI GTSAC 3 cut(s) 844, 1887, 3059
Tsp45I GTSAC 3 cut(s) 844, 1887, 3059
TspGWI ACGGA 5 cut(s) 20, 29, 1156, 1374, 2679
TspRI CASTG 7 cut(s) 949, 1028, 1117, 1717, 2043, 2749, 2792
Van91I CCANNNNNTGG 1 cut(s) 2064
VpaK11BI GGWCC 6 cut(s) 106, 138, 259, 1065, 1329, 2667
VspI ATTAAT 2 cut(s) 483, 1625
XagI CCTNNNNNAGG 1 cut(s) 2474
XapI RAATTY 3 cut(s) 972, 1739, 2360
XceI RCATGY 3 cut(s) 1664, 2205, 3028
XcmI CCANNNNNNNNNTGG 1 cut(s) 2573
XmiI GTMKAC 4 cut(s) 1033, 1579, 1657, 2520
XmnI GAANNNNTTC 3 cut(s) 456, 1119, 1461
XspI CTAG 7 cut(s) 870, 1089, 1278, 1568, 1775, 1847, 2393
ZraI GACGTC 1 cut(s) 202
ZrmI AGTACT 1 cut(s) 1818
Zsp2I ATGCAT 2 cut(s) 1121, 3091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.