Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000999

Physical Location & Seq

Genomic Coordinates Reverse (-)

46612481 .. 46615100

Gene Structure 2620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0292600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGATGTCAGAGACCCATTTCAACCAGGGTGACCAAGTCGAGGTCACAACCTCCGTCCACGGCGGCTCCACCGGCCCCTACTACCCAGCCACCGTGCTCCGTCCAGTCATCAAAGACAAGGCCCGCATCTTAGTCCAGTACCAAACCCTAACGGCCCACGGCGGAGGCCCAAAGCCGTTGAGGGAGATTGTGGAGGTCGGCAATGTGCGGCCCATGCCTCCCCGGGAGCTCCACCGGCCGTTCAAGGTCGGCGATGACGTGGACGCGTTCAGGGAAAAAGGGTGGTATCGTGGGACGGTGAGGGAGATTTTGGAGAATTCAAAGTACTTGGTGGTGTTGGATGGTAAAGCTGACCTGGAATTTGAGCGTGACCATTTTGATTTGAGGGTTCATAGAGAGTGGGATGATGGGTCTTGGGTCCCTCCTCTTCCACAAGAGCAAAAATCATCTGGGGTGGTGAAATGCAGAAAGATAACGATTAAAATAAAGGATAAGAAGGAAACTATGGGAGCAAATTACTTTGGAAGGGGGACTCTGGAGGATGATGATCAGGAATTCGAGTCGAAGCAGTTTAATTTGAGGCTTCACAGAGAGTGGGATGACCGGTCTTCAGTCCCTCCTCTTTCGGAAGAGCAAAAGTCATCTGGGGTGGTGAAATGCAGAAAGATAAGATTCAAATTAAAGGCCAAGAAGGAAACTGTGAGGAGAAACTTTGAAAACGGGACTCTGGTGGAGGTCAGCAGTGATGAGGAGGGTTACAAAGATGCTTGGTACACTGCTACAATAGTTGACTACATTGGAAAAGACAAGTTTCTGGTGGAATACGTGTCCCTGGTAACTGATGATAGAACCCAGCTCTTGAGAGAAGAAGCATCTTCAAGTCACATTAGGCCTTGTCCTCCTCCACTTCCACCACTTGTCCAATTCAAAGTTCTTCAGAAAGTCGATGCTTGGTACAATGAGGGATGGTGGGAAGGATCCATTTCCAAAGTTCTGACCGGCTCAAAGTACGTCGTGTATTTCAGCTCCACCAATGAGGAATTAGAGTTCAAGCATTCCAATTTGAGGCTTCATCAGGACTGGTGTAACGGGCATTGGGTAATGGATCCATGCCAGGACTTCTATGGGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0008964 GO:0009060 GO:0009987 GO:0015980 GO:0016829 GO:0016830 GO:0016831 GO:0016999 GO:0017144 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0055114 GO:0071704 GO:0072350

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

377

Amino Acids

43.6

Weight (kDa)

6.3

Isoelectric Point (pI)

29.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Agenet	PF05641	10 - 74	6e-10	Agenet domain
Agenet	PF05641	241 - 301	1.3e-19	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68750
fragaria_vesca	FvH4_3g20961 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350 FvH4_4g28350
malus_domestica	MD13G1049200.v1.1 MD16G1050300.v1.1
prunus_persica	Prupe.1G302700_v2.0.a1 Prupe.1G302700_v2.0.a1
pyrus_communis	pycom16g04410
rosa_chinensis	RchiOBHm_Chr1g0330331 RchiOBHm_Chr1g0355581 RchiOBHm_Chr1g0379911 RchiOBHm_Chr4g0407141 RchiOBHm_Chr4g0436201 RchiOBHm_Chr5g0035501 RchiOBHm_Chr5g0035601 RchiOBHm_Chr5g0035681 RchiOBHm_Chr5g0035861 RchiOBHm_Chr5g0063691 RchiOBHm_Chr6g0312331
rosa_laevigata	RLG00000006529 RLG00000033624 RLG00000033642 RLG00000033654
rosa_multiflora	Rmu_sc0000084.1_g000022 Rmu_sc0006173.1_g000008 Rmu_sc0007205.1_g000021 Rmu_sc0014259.1_g000014
rosa_roxburghii	Rroxscaffold_1G00021870 Rroxscaffold_1G00044830 Rroxscaffold_1G00044890 Rroxscaffold_1G00044970 Rroxscaffold_3G00231670 Rroxscaffold_5G00377400 Rroxscaffold_7G00185100
rosa_rugosa	Rorug03G0294000 Rorug04G0292500 Rorug04G0292600 Rorug04G0292600
rosa_samantha	Rh4AG346800 Rh4BG355700 Rh4CG370400 Rh4DG349400 Rh5AG245000 Rh5BG244800 Rh5CG276300 Rh5CG276800 Rh5DG253900 Rh5DG464900 Rh6BG126500
rosa_wichuraiana	Rw1G008440 Rw4G030310 Rw5G022500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	266
AciI	CCGC	4 cut(s)	63, 124, 162, 208
AclWI	GGATC	4 cut(s)	972, 985, 1100, 1113
AcoI	YGGCCR	1 cut(s)	236
AcsI	RAATTY	3 cut(s)	316, 359, 554
AcuI	CTGAAG	2 cut(s)	594, 920
AfaI	GTAC	5 cut(s)	140, 326, 773, 956, 1010
AfiI	CCNNNNNNNGG	2 cut(s)	40, 1065
AflIII	ACRYGT	2 cut(s)	264, 825
AgeI	ACCGGT	1 cut(s)	603
AgsI	TTSAA	8 cut(s)	22, 244, 321, 676, 716, 879, 928, 1051
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	4 cut(s)	24, 354, 831, 1113
AjuI	GAANNNNNNNTTGG	2 cut(s)	915, 947
AloI	GAACNNNNNNTCC	2 cut(s)	1031, 1063
AluBI	AGCT	4 cut(s)	229, 350, 856, 1026
AluI	AGCT	4 cut(s)	229, 350, 856, 1026
Alw21I	GWGCWC	2 cut(s)	99, 231
Alw26I	GTCTC	1 cut(s)	5
AlwI	GGATC	4 cut(s)	972, 985, 1100, 1113
Ama87I	CYCGRG	1 cut(s)	222
AoxI	GGCC	8 cut(s)	73, 120, 153, 166, 209, 236, 684, 890
ApoI	RAATTY	3 cut(s)	316, 359, 554
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
AsiGI	ACCGGT	1 cut(s)	603
AspS9I	GGNCC	6 cut(s)	74, 121, 154, 167, 210, 418
AsuC2I	CCSGG	2 cut(s)	223, 224
AsuHPI	GGTGA	4 cut(s)	41, 310, 469, 664
AvaI	CYCGRG	1 cut(s)	222
AvaII	GGWCC	1 cut(s)	418
BamHI	GGATCC	2 cut(s)	977, 1105
BanII	GRGCYC	1 cut(s)	231
BbsI	GAAGAC	1 cut(s)	600
Bbv12I	GWGCWC	2 cut(s)	99, 231
BccI	CCATC	3 cut(s)	335, 401, 960
BceAI	ACGGC	5 cut(s)	76, 160, 168, 175, 223
BciT130I	CCWGG	4 cut(s)	26, 356, 833, 1115
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	2 cut(s)	223, 224
BcoDI	GTCTC	1 cut(s)	5
BisI	GCNGC	2 cut(s)	64, 209
BlsI	GCNGC	2 cut(s)	65, 210
BmcAI	AGTACT	1 cut(s)	326
Bme1390I	CCNGG	6 cut(s)	26, 223, 224, 356, 833, 1115
Bme18I	GGWCC	1 cut(s)	418
BmeT110I	CYCGRG	1 cut(s)	222
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	6 cut(s)	74, 121, 154, 167, 210, 418
BmiI	GGNNCC	6 cut(s)	67, 76, 419, 420, 979, 1107
BmrFI	CCNGG	6 cut(s)	26, 223, 224, 356, 833, 1115
BmsI	GCATC	4 cut(s)	135, 754, 881, 937
BpiI	GAAGAC	1 cut(s)	600
BpmI	CTGGAG	1 cut(s)	557
BpuEI	CTTGAG	1 cut(s)	880
BpuMI	CCSGG	2 cut(s)	223, 224
BsaAI	YACGTR	1 cut(s)	826
BsaBI	GATNNNNATC	1 cut(s)	546
BsaI	GGTCTC	1 cut(s)	5
BsaJI	CCNNGG	6 cut(s)	25, 58, 157, 221, 222, 831
BsaWI	WCCGGW	1 cut(s)	603
BsaXI	ACNNNNNCTCC	2 cut(s)	50, 80
Bsc4I	CCNNNNNNNGG	2 cut(s)	40, 1065
Bse118I	RCCGGY	4 cut(s)	71, 234, 603, 998
Bse1I	ACTGG	3 cut(s)	104, 136, 1085
Bse3DI	GCAATG	1 cut(s)	208
Bse8I	GATNNNNATC	1 cut(s)	546
BseBI	CCWGG	4 cut(s)	26, 356, 833, 1115
BseDI	CCNNGG	6 cut(s)	25, 58, 157, 221, 222, 831
BseGI	GGATG	5 cut(s)	346, 409, 547, 604, 971
BseJI	GATNNNNATC	1 cut(s)	546
BseLI	CCNNNNNNNGG	2 cut(s)	40, 1065
BseMI	GCAATG	1 cut(s)	208
BseNI	ACTGG	3 cut(s)	104, 136, 1085
BseRI	GAGGAG	5 cut(s)	414, 609, 718, 764, 891
BseX3I	CGGCCG	1 cut(s)	236
BseYI	CCCAGC	2 cut(s)	85, 852
Bsh1236I	CGCG	1 cut(s)	266
Bsh1285I	CGRYCG	1 cut(s)	239
BshFI	GGCC	8 cut(s)	75, 122, 155, 168, 211, 238, 686, 892
BshTI	ACCGGT	1 cut(s)	603
BsiEI	CGRYCG	1 cut(s)	239
BsiHKAI	GWGCWC	2 cut(s)	99, 231
BsiHKCI	CYCGRG	1 cut(s)	222
BsiSI	CCGG	5 cut(s)	72, 223, 235, 604, 999
BslFI	GGGAC	6 cut(s)	307, 404, 544, 599, 736, 814
BslI	CCNNNNNNNGG	2 cut(s)	40, 1065
BsmAI	GTCTC	1 cut(s)	5
BsmFI	GGGAC	6 cut(s)	307, 404, 544, 599, 736, 814
BsmI	GAATGC	1 cut(s)	1054
BsnI	GGCC	8 cut(s)	75, 122, 155, 168, 211, 238, 686, 892
Bso31I	GGTCTC	1 cut(s)	5
BsoBI	CYCGRG	1 cut(s)	222
Bsp1286I	GDGCHC	2 cut(s)	99, 231
Bsp143I	GATC	3 cut(s)	547, 977, 1105
BspACI	CCGC	4 cut(s)	63, 124, 162, 208
BspANI	GGCC	8 cut(s)	75, 122, 155, 168, 211, 238, 686, 892
BspFNI	CGCG	1 cut(s)	266
BspLI	GGNNCC	6 cut(s)	67, 76, 419, 420, 979, 1107
BspPI	GGATC	4 cut(s)	972, 985, 1100, 1113
BspQI	GCTCTTC	1 cut(s)	624
BspTNI	GGTCTC	1 cut(s)	5
BsrDI	GCAATG	1 cut(s)	208
BsrFI	RCCGGY	4 cut(s)	71, 234, 603, 998
BsrI	ACTGG	3 cut(s)	104, 136, 1085
BssAI	RCCGGY	4 cut(s)	71, 234, 603, 998
BssECI	CCNNGG	6 cut(s)	25, 58, 157, 221, 222, 831
BssMI	GATC	3 cut(s)	547, 977, 1105
Bst2UI	CCWGG	4 cut(s)	26, 356, 833, 1115
Bst4CI	ACNGT	3 cut(s)	94, 298, 700
Bst6I	CTCTTC	2 cut(s)	432, 624
BstBAI	YACGTR	1 cut(s)	826
BstC8I	GCNNGC	1 cut(s)	124
BstDEI	CTNAG	1 cut(s)	130
BstDSI	CCRYGG	2 cut(s)	58, 157
BstEII	GGTNACC	1 cut(s)	29
BstF5I	GGATG	5 cut(s)	346, 409, 547, 604, 971
BstFNI	CGCG	1 cut(s)	266
BstKTI	GATC	3 cut(s)	550, 980, 1108
BstMAI	GTCTC	1 cut(s)	5
BstMBI	GATC	3 cut(s)	547, 977, 1105
BstMCI	CGRYCG	1 cut(s)	239
BstMWI	GCNNNNNNNGC	3 cut(s)	72, 214, 235
BstNI	CCWGG	4 cut(s)	26, 356, 833, 1115
BstPI	GGTNACC	1 cut(s)	29
BstSCI	CCNGG	6 cut(s)	24, 221, 222, 354, 831, 1113
BstUI	CGCG	1 cut(s)	266
BstV2I	GAAGAC	1 cut(s)	600
BstX2I	RGATCY	2 cut(s)	977, 1105
BstYI	RGATCY	2 cut(s)	977, 1105
BstZI	CGGCCG	1 cut(s)	236
BsuRI	GGCC	8 cut(s)	75, 122, 155, 168, 211, 238, 686, 892
BtgI	CCRYGG	2 cut(s)	58, 157
BtgZI	GCGATG	1 cut(s)	267
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	5 cut(s)	346, 409, 547, 604, 971
BtsI	GCAGTG	2 cut(s)	748, 774
BtsIMutI	CAGTG	2 cut(s)	748, 774
Cac8I	GCNNGC	1 cut(s)	124
Cfr10I	RCCGGY	4 cut(s)	71, 234, 603, 998
Cfr13I	GGNCC	6 cut(s)	74, 121, 154, 167, 210, 418
Cfr9I	CCCGGG	1 cut(s)	222
CseI	GACGC	1 cut(s)	272
Csp6I	GTAC	5 cut(s)	139, 325, 772, 955, 1009
CspAI	ACCGGT	1 cut(s)	603
CviAII	CATG	2 cut(s)	214, 1110
CviQI	GTAC	5 cut(s)	139, 325, 772, 955, 1009
DdeI	CTNAG	1 cut(s)	130
DpnI	GATC	3 cut(s)	549, 979, 1107
DpnII	GATC	3 cut(s)	547, 977, 1105
EaeI	YGGCCR	1 cut(s)	236
EagI	CGGCCG	1 cut(s)	236
Eam1104I	CTCTTC	2 cut(s)	432, 624
EarI	CTCTTC	2 cut(s)	432, 624
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	229
EclXI	CGGCCG	1 cut(s)	236
Eco147I	AGGCCT	1 cut(s)	892
Eco24I	GRGCYC	1 cut(s)	231
Eco31I	GGTCTC	1 cut(s)	5
Eco47I	GGWCC	1 cut(s)	418
Eco52I	CGGCCG	1 cut(s)	236
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	2 cut(s)	594, 920
Eco88I	CYCGRG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	29
EcoICRI	GAGCTC	1 cut(s)	229
EcoO109I	RGGNCCY	1 cut(s)	418
EcoO65I	GGTNACC	1 cut(s)	29
EcoRI	GAATTC	2 cut(s)	316, 554
EcoRII	CCWGG	4 cut(s)	24, 354, 831, 1113
EcoT38I	GRGCYC	1 cut(s)	231
FaeI	CATG	2 cut(s)	217, 1113
FaiI	YATR	5 cut(s)	215, 393, 506, 1111, 1125
FaqI	GGGAC	6 cut(s)	307, 404, 544, 599, 736, 814
FatI	CATG	2 cut(s)	213, 1109
FauI	CCCGC	1 cut(s)	131
FbaI	TGATCA	1 cut(s)	547
Fnu4HI	GCNGC	2 cut(s)	64, 209
FokI	GGATG	5 cut(s)	353, 416, 554, 611, 978
FriOI	GRGCYC	1 cut(s)	231
Fsp4HI	GCNGC	2 cut(s)	64, 209
GluI	GCNGC	2 cut(s)	64, 209
GsaI	CCCAGC	2 cut(s)	89, 856
GsuI	CTGGAG	1 cut(s)	557
HaeIII	GGCC	8 cut(s)	75, 122, 155, 168, 211, 238, 686, 892
HapII	CCGG	5 cut(s)	72, 223, 235, 604, 999
HgaI	GACGC	1 cut(s)	272
Hin1II	CATG	2 cut(s)	217, 1113
HincII	GTYRAC	1 cut(s)	790
HindII	GTYRAC	1 cut(s)	790
HinfI	GANTC	4 cut(s)	532, 560, 672, 724
HpaII	CCGG	5 cut(s)	72, 223, 235, 604, 999
HphI	GGTGA	4 cut(s)	41, 310, 469, 664
Hpy166II	GTNNAC	4 cut(s)	58, 262, 774, 790
Hpy188I	TCNGA	4 cut(s)	10, 628, 939, 996
Hpy188III	TCNNGA	4 cut(s)	536, 551, 859, 1076
Hpy8I	GTNNAC	4 cut(s)	58, 262, 774, 790
Hpy99I	CGWCG	1 cut(s)	1016
HpyAV	CCTTC	4 cut(s)	490, 519, 685, 968
HpyCH4III	ACNGT	3 cut(s)	94, 298, 700
HpyCH4IV	ACGT	3 cut(s)	258, 825, 1011
HpyCH4V	TGCA	2 cut(s)	465, 660
HpyF10VI	GCNNNNNNNGC	3 cut(s)	72, 214, 235
HpyF3I	CTNAG	1 cut(s)	130
HpySE526I	ACGT	3 cut(s)	258, 825, 1011
Hsp92II	CATG	2 cut(s)	217, 1113
KflI	GGGWCCC	1 cut(s)	418
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	3 cut(s)	547, 977, 1105
LguI	GCTCTTC	1 cut(s)	624
LmnI	GCTCC	6 cut(s)	71, 102, 226, 234, 509, 1031
LweI	GCATC	4 cut(s)	135, 754, 881, 937
MaeII	ACGT	3 cut(s)	258, 825, 1011
MaeIII	GTNAC	7 cut(s)	29, 43, 368, 755, 835, 881, 1085
MalI	GATC	3 cut(s)	549, 979, 1107
MboI	GATC	3 cut(s)	547, 977, 1105
MboII	GAAGA	6 cut(s)	419, 600, 641, 867, 878, 926
MflI	RGATCY	2 cut(s)	977, 1105
MhlI	GDGCHC	2 cut(s)	99, 231
MluCI	AATT	9 cut(s)	316, 359, 514, 554, 574, 677, 923, 1040, 1060
MluI	ACGCGT	1 cut(s)	264
MlyI	GAGTC	3 cut(s)	526, 569, 718
MmeI	TCCRAC	1 cut(s)	318
MseI	TTAA	3 cut(s)	480, 573, 680
MspI	CCGG	5 cut(s)	72, 223, 235, 604, 999
MspR9I	CCNGG	6 cut(s)	26, 223, 224, 356, 833, 1115
Mva1269I	GAATGC	1 cut(s)	1054
MvaI	CCWGG	4 cut(s)	26, 356, 833, 1115
MvnI	CGCG	1 cut(s)	266
MwoI	GCNNNNNNNGC	3 cut(s)	72, 214, 235
NciI	CCSGG	2 cut(s)	223, 224
NdeII	GATC	3 cut(s)	547, 977, 1105
NlaIII	CATG	2 cut(s)	217, 1113
NlaIV	GGNNCC	6 cut(s)	67, 76, 419, 420, 979, 1107
NmuCI	GTSAC	4 cut(s)	29, 43, 368, 881
PceI	AGGCCT	1 cut(s)	892
PciSI	GCTCTTC	1 cut(s)	624
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PctI	GAATGC	1 cut(s)	1054
PfeI	GAWTC	1 cut(s)	672
PflFI	GACNNNGTC	1 cut(s)	35
PinAI	ACCGGT	1 cut(s)	603
PkrI	GCNGC	2 cut(s)	65, 210
PleI	GAGTC	3 cut(s)	526, 568, 718
PpsI	GAGTC	3 cut(s)	526, 568, 718
Ppu21I	YACGTR	1 cut(s)	826
PpuMI	RGGWCCY	1 cut(s)	418
Psp124BI	GAGCTC	1 cut(s)	231
Psp5II	RGGWCCY	1 cut(s)	418
Psp6I	CCWGG	4 cut(s)	24, 354, 831, 1113
PspEI	GGTNACC	1 cut(s)	29
PspFI	CCCAGC	2 cut(s)	85, 852
PspGI	CCWGG	4 cut(s)	24, 354, 831, 1113
PspN4I	GGNNCC	6 cut(s)	67, 76, 419, 420, 979, 1107
PspPI	GGNCC	6 cut(s)	74, 121, 154, 167, 210, 418
PspPPI	RGGWCCY	1 cut(s)	418
PsuI	RGATCY	2 cut(s)	977, 1105
PsyI	GACNNNGTC	1 cut(s)	35
RsaI	GTAC	5 cut(s)	140, 326, 773, 956, 1010
RsaNI	GTAC	5 cut(s)	139, 325, 772, 955, 1009
SacI	GAGCTC	1 cut(s)	231
SapI	GCTCTTC	1 cut(s)	624
SaqAI	TTAA	3 cut(s)	480, 573, 680
SatI	GCNGC	2 cut(s)	64, 209
Sau3AI	GATC	3 cut(s)	547, 977, 1105
Sau96I	GGNCC	6 cut(s)	74, 121, 154, 167, 210, 418
ScaI	AGTACT	1 cut(s)	326
SchI	GAGTC	3 cut(s)	526, 569, 718
ScrFI	CCNGG	6 cut(s)	26, 223, 224, 356, 833, 1115
SduI	GDGCHC	2 cut(s)	99, 231
SfaNI	GCATC	4 cut(s)	135, 754, 881, 937
SinI	GGWCC	1 cut(s)	418
SmaI	CCCGGG	1 cut(s)	224
SmlI	CTYRAG	1 cut(s)	859
SmoI	CTYRAG	1 cut(s)	859
Sse9I	AATT	9 cut(s)	316, 359, 514, 554, 574, 677, 923, 1040, 1060
SseBI	AGGCCT	1 cut(s)	892
SsiI	CCGC	4 cut(s)	63, 124, 162, 208
SstI	GAGCTC	1 cut(s)	231
StuI	AGGCCT	1 cut(s)	892
StyD4I	CCNGG	6 cut(s)	24, 221, 222, 354, 831, 1113
TaaI	ACNGT	3 cut(s)	94, 298, 700
TaiI	ACGT	3 cut(s)	261, 828, 1014
TaqI	TCGA	4 cut(s)	39, 558, 563, 945
TasI	AATT	9 cut(s)	316, 359, 514, 554, 574, 677, 923, 1040, 1060
TatI	WGTACW	1 cut(s)	324
TauI	GCSGC	2 cut(s)	66, 211
TfiI	GAWTC	1 cut(s)	672
Tru1I	TTAA	3 cut(s)	480, 573, 680
Tru9I	TTAA	3 cut(s)	480, 573, 680
TscAI	CASTG	2 cut(s)	748, 781
TseFI	GTSAC	4 cut(s)	29, 43, 368, 881
Tsp45I	GTSAC	4 cut(s)	29, 43, 368, 881
TspDTI	ATGAA	2 cut(s)	380, 1061
TspGWI	ACGGA	2 cut(s)	43, 89
TspMI	CCCGGG	1 cut(s)	222
TspRI	CASTG	2 cut(s)	748, 781
Tth111I	GACNNNGTC	1 cut(s)	35
VpaK11BI	GGWCC	1 cut(s)	418
XapI	RAATTY	3 cut(s)	316, 359, 554
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1121
XmaI	CCCGGG	1 cut(s)	222
ZrmI	AGTACT	1 cut(s)	326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.