Rh5DG464900

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
73829168 .. 73858109
28942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG464900.1

Sequence Viewer

Length: 606 bp
ATGCAAATGAAGCTTGCAAGTGACATCCTTGCTGTGGAGCTTTTGCAAAAAGATGCACGACTTGCTGTTAGTGGACAGATAGGAAAGCCATGTCCTGGTGGAACGTTGCATCATTCCAGAACATCTAGAGTGAGTAAGGCACTTGATGAATTTGTGGCGGCGGCTGCATGTAGGAAGGATTCTGCTGTTGGTACTGAGGCTGCGGCTGCATGTAAGAAGGATGAAGTTGTTGGTACGGAGGCTGCGGCTGCTGAGAGAATGGTTGATAGTGCTCGTAGCAAGGCTGCGGCTGCATGTAGGAAGGATGAAGTTGTCATTACGGAGGCTGTGGATGCTGAAAGAATGGTTGATAGTGCTCAAAGCAAGGTTGCGGCTGCTTGTAGGAAGGATGAAGTTATTGGTAATGAGGCTGCGCCTGCTGAAAGGATGGTTGATATTGCTCGTAGCAAGGCTGAGACATCATTTGTTGGTAAGAATTTTGTTGTTGCTGGTAGAAAAGCTGCTGTTGCTGCTACTGCATACAAGGAACATAAAAGAACAAATTTGTATGAGTTTTTTTGCTCACATGTGGCAAGTTACGAGTGTGAGCCTAGCATTCCCCTTTGA

Protein Analysis

201

Amino Acids

21.28

Weight (kDa)

7.58

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 95
AciI CCGC 6 cut(s) 158, 161, 203, 245, 287, 371
AclI AACGTT 1 cut(s) 104
AcsI RAATTY 3 cut(s) 149, 475, 541
AfaI GTAC 2 cut(s) 193, 235
AfiI CCNNNNNNNGG 2 cut(s) 34, 95
AflIII ACRYGT 1 cut(s) 565
AjnI CCWGG 1 cut(s) 94
AluBI AGCT 3 cut(s) 13, 40, 500
AluI AGCT 3 cut(s) 13, 40, 500
Alw21I GWGCWC 2 cut(s) 274, 358
Alw26I GTCTC 1 cut(s) 449
ApoI RAATTY 3 cut(s) 149, 475, 541
AspLEI GCGC 1 cut(s) 415
Bbv12I GWGCWC 2 cut(s) 274, 358
BccI CCATC 1 cut(s) 421
BciT130I CCWGG 1 cut(s) 96
BcoDI GTCTC 1 cut(s) 449
BfaI CTAG 2 cut(s) 126, 591
Bme1390I CCNGG 1 cut(s) 96
BmrFI CCNGG 1 cut(s) 96
BmsI GCATC 3 cut(s) 43, 118, 322
Bsc4I CCNNNNNNNGG 2 cut(s) 34, 95
BseBI CCWGG 1 cut(s) 96
BseGI GGATG 6 cut(s) 24, 226, 310, 337, 394, 432
BseLI CCNNNNNNNGG 2 cut(s) 34, 95
BseMII CTCAG 3 cut(s) 186, 243, 444
BsiHKAI GWGCWC 2 cut(s) 274, 358
BslI CCNNNNNNNGG 2 cut(s) 34, 95
BsmAI GTCTC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 594
Bsp1286I GDGCHC 2 cut(s) 274, 358
BspACI CCGC 6 cut(s) 158, 161, 203, 245, 287, 371
BspCNI CTCAG 3 cut(s) 187, 244, 445
Bst2UI CCWGG 1 cut(s) 96
BstAPI GCANNNNNTGC 1 cut(s) 62
BstC8I GCNNGC 2 cut(s) 15, 417
BstDEI CTNAG 3 cut(s) 195, 252, 453
BstF5I GGATG 6 cut(s) 24, 226, 310, 337, 394, 432
BstHHI GCGC 1 cut(s) 415
BstMAI GTCTC 1 cut(s) 449
BstNI CCWGG 1 cut(s) 96
BstNSI RCATGY 4 cut(s) 171, 213, 297, 569
BstSCI CCNGG 1 cut(s) 94
BtsCI GGATG 6 cut(s) 24, 226, 310, 337, 394, 432
Cac8I GCNNGC 2 cut(s) 15, 417
CfoI GCGC 1 cut(s) 415
Csp6I GTAC 2 cut(s) 192, 234
CviAII CATG 5 cut(s) 90, 168, 210, 294, 566
CviQI GTAC 2 cut(s) 192, 234
DdeI CTNAG 3 cut(s) 195, 252, 453
EcoRII CCWGG 1 cut(s) 94
FaeI CATG 5 cut(s) 93, 171, 213, 297, 569
FaiI YATR 8 cut(s) 91, 169, 211, 295, 520, 531, 549, 567
FatI CATG 5 cut(s) 89, 167, 209, 293, 565
FokI GGATG 6 cut(s) 11, 233, 317, 344, 401, 439
FspBI CTAG 2 cut(s) 126, 591
GlaI GCGC 1 cut(s) 414
HhaI GCGC 1 cut(s) 415
Hin1II CATG 5 cut(s) 93, 171, 213, 297, 569
Hin6I GCGC 1 cut(s) 413
HinP1I GCGC 1 cut(s) 413
HindIII AAGCTT 1 cut(s) 11
HinfI GANTC 1 cut(s) 179
Hpy166II GTNNAC 1 cut(s) 74
Hpy188III TCNNGA 2 cut(s) 117, 126
Hpy8I GTNNAC 1 cut(s) 74
HpyAV CCTTC 4 cut(s) 169, 211, 295, 379
HpyCH4IV ACGT 1 cut(s) 104
HpyCH4V TGCA 9 cut(s) 4, 17, 46, 56, 109, 167, 209, 293, 518
HpyF3I CTNAG 3 cut(s) 195, 252, 453
HpySE526I ACGT 1 cut(s) 104
Hsp92II CATG 5 cut(s) 93, 171, 213, 297, 569
HspAI GCGC 1 cut(s) 413
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 5 cut(s) 81, 108, 130, 429, 474
LweI GCATC 3 cut(s) 43, 118, 322
MaeI CTAG 2 cut(s) 126, 591
MaeII ACGT 1 cut(s) 104
MaeIII GTNAC 2 cut(s) 20, 575
MhlI GDGCHC 2 cut(s) 274, 358
MluCI AATT 3 cut(s) 149, 475, 541
MnlI CCTC 4 cut(s) 190, 232, 316, 400
MspR9I CCNGG 1 cut(s) 96
Mva1269I GAATGC 1 cut(s) 594
MvaI CCWGG 1 cut(s) 96
NlaIII CATG 5 cut(s) 93, 171, 213, 297, 569
NmuCI GTSAC 1 cut(s) 20
NspI RCATGY 4 cut(s) 171, 213, 297, 569
PciI ACATGT 1 cut(s) 565
PctI GAATGC 1 cut(s) 594
PfeI GAWTC 1 cut(s) 179
PflMI CCANNNNNTGG 1 cut(s) 95
PscI ACATGT 1 cut(s) 565
Psp1406I AACGTT 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 94
PspGI CCWGG 1 cut(s) 94
RsaI GTAC 2 cut(s) 193, 235
RsaNI GTAC 2 cut(s) 192, 234
ScrFI CCNGG 1 cut(s) 96
SduI GDGCHC 2 cut(s) 274, 358
SetI ASST 5 cut(s) 15, 42, 107, 369, 502
SfaNI GCATC 3 cut(s) 43, 118, 322
Sse9I AATT 3 cut(s) 149, 475, 541
SsiI CCGC 6 cut(s) 158, 161, 203, 245, 287, 371
SspMI CTAG 2 cut(s) 126, 591
StyD4I CCNGG 1 cut(s) 94
TaiI ACGT 1 cut(s) 107
TasI AATT 3 cut(s) 149, 475, 541
TauI GCSGC 6 cut(s) 161, 164, 206, 248, 290, 374
TfiI GAWTC 1 cut(s) 179
TseFI GTSAC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 5 cut(s) 23, 162, 237, 321, 405
TspGWI ACGGA 2 cut(s) 251, 335
Van91I CCANNNNNTGG 1 cut(s) 95
XapI RAATTY 3 cut(s) 149, 475, 541
XbaI TCTAGA 1 cut(s) 125
XceI RCATGY 4 cut(s) 171, 213, 297, 569
XspI CTAG 2 cut(s) 126, 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.