RchiOBHm_Chr4g0436201

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
59543221 .. 59551782
8562 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40455

Sequence Viewer

Length: 3108 bp
ATGACGGACACGACGGACGATATCGCCGAGGAAATCTCGTTCCAGAGCTTCGAAGACGATTGTAAAATGCTCGGCAATCTTCTCCTGGAGGTTTTGCAGCGAGAAGTCGGAGCTCAGATGAGGGAGAAAGTCGACCGCTACAGAACCCTCGCTCAGAGTGCTTGTAGTATGAGGCTAGCGGGGATAGAGCACATGGCGGAGCTGCTGGAGAAGCAGCTAGCGTCGGACATTTCGAATATGAGCTTAGAGGAGGCACTCACTCTCGCTCGTGCTTTCGGCCATTACCTCAGTTTGATGGGCATTGCTGAAGTTCATCATAGGGTTCGTAGACAAAAGAATGTGGCATCCCTATCAAAATCTTGTGATGATATTTTTTATCAGCTTCTGCAGCGTGGAGTTTCCCCGGACCAGCTTTACGAGACTGTTTGCAAGCAGGAGGTCGAGATTGTTCTTACTGCACATCCTACACAAATTAATCGCCGAACCTTACAATACAAACATATCAAACTTTCTCATCTTTTAGATTTAAAAGACCGACCTGATCTTACTACTGAAGAGAGAGATATGGTGATTGAAGATATGGTGCGAGAGATTACTTCTATATGGCAGACAGATGAGCTTAGGCGCCATAAACCCACACCAGTTGATGAAGCTAGCGCGGGTTTGAACATTGTGGAGCAATCCCTTTGGAAAGCTGTACCTCATTATTTACGTCGTGTCAGCAATGCTTTAAAGAAGCACACTGGAAAACCACTTCCTCTGAAATGCACACCAATCAGGTTTGGGTCTTGGATGGGGGGTGATAGAGATGGAAATCCCAATGTGACAGCAAAGGTCACAAAAGATGTCTCACTTTTATCTAGGTGGATGACTATTGATCTCTATATTCGAGAAGTAGATAGCCTGAAATTTGAACTATCCATGAATAGGTGCAGCGATAGCTTGTCAAAACTGGCACATGAGATCCTAGAGCAAGAATCTGCATCTGAGGATCGCCATAGTTGGGATCATCAGTGTTATAGTAGAAATCAGGTAAAGCAACAAGCTGCGGCACTTCCAACACAACTTCCAGCTAGAGCTGATCAACCCTCTTGCACTGAATGCAATGTTGGTCATTCTCACTATCCCAGAATTGAAATTCCTCGAACTGGGCTACTCAATCAGCAGGATGGTCCGGACTCTCCAAGATCTCCAATGGCAAAGTCTCCATCCCAGAACTCTCTTCGTAATGCTAGTCTCATTGCCAAGAGGAAAATGTTTGCTGAGTCCCAGGTTGGAAGGTCCAGTTTCCAGAAGCTTTTAGAGCCAAAGCCCACTAAGAGATCTGCAATTGCTCCTTATAGAATTGTTCTTGGTAATATAAAAGAGAAGCTTATGAAGACACGAAGACGATTGGAGCTTCTTCTAGAGGATCTGCCTTGCGATTTTAATCTATTGGAGTATTATGACACATCAGATGAACTTATAGAACCACTGATGACATGCCATGACTCTTTGCAATCATGTGGATCTGGGATCCTAGCTGATGGTCGGCTTGCTGATTTGATCCGAAGAGTTGCTACCTTTGGGATGGTATTAATGAAGCTCGACTTGCGTCAGATTGCATTGGGGCAGGAATCTGGTAGACATGCTGAAACATTTGATGCAATTACCAAATATTTGGATATGGGCACATACAGTGAGTGGGATGAAGAAAAGAAACTGGAATTTCTAACAAGAGAGCTCAAAGGAAAAAGACCGCTAGTCTCACCTAGCATGGAGGTTGCTTCTGATGTTAAAGAAGTACTGGATACCTTCCGCATTGCTGCTGAGCTAGGGAGTGATTCGCTTGGAGCATATGTGATTTCTATGGCTTCTAACGCAAGTGATGTCCTAGCTGTGGAGCTTTTGCAAAAAGATGCACGACTTGCCGTTAGTGGAGAAATAGGAAAGCCATGTCCTGGTGGAACGCTGCGTGTGGTTCCTTTGTTTGAAACTGTGAAGGACTTGAGAGGAGCTGGCTCAGTGATCAGGAAATTATTGTCCATTGATTGGTACAGGGAGCACATCATCAAGAACCATAATGGGCATCAAGAGGTGATGGTTGGATACTCTGATTCTGGAAAAGATGCAGGGCGTTTTACTGCTGCATGGGAACTTTACAAAGCTCAAGAGGATGTTGTAGCTGCATGCAATGAGTATGATATCAAAGTTACCCTGTTTCATGGGAGAGGAGGAAGTATTGGTCGTGGAGGGGGCCCTACATATCTTGCCATTCAATCCCAGCCGCCTGGCTCTGTGATGGGTACTCTACGATCAACGGAGCAAGGAGAAATGGTACAGGCAAAATTTGGGCTGCCACAGATTGCTGTCAGACAGCTAGAGATATACACAACAGCTGTGCTGCTTGCAACATTGCGTCCTCCACACCCTCCTCGAGAACAAAAGTGGCGTAACCTCATGGAGGAGATCTCAAAAATCAGTTGTCAGAATTATAGGAGCGTAGTCTACGAAAATCCAGAATTCCTTACTTACTTCCAGGAGGCTACACCCCAGGCTGAGCTTGGGTTCCTCAACATAGGAAGCCGCCCTACAAGAAGAAAGAGTTCTACAGGAATTGGTCATCTTCGGGCAATTCCATGGGTGTTTGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGACCAGGTTTAAGGGGGGTTTGTGAGAAGGGACACACTGAAGACTTGAAAGCCATGTACAAAGAATGGCCTTTCTTCCAGTCCACCATTGACCTCATTGAGATGGTTTTAGGGAAGGCAGACGTTCCTATATCCAAACACTATGATGAAGTTCTCGTCTCAAACAGCAGGCGCCATCTTGGTGATGAACTGAGAATGGAGCTGGTAGCGACAGAGAAATTGGTGTTGGTGGTTAGTGGACATGAGAAACTATCTGCTAATAATCGGATCTTGAGGAGGCTGATCGAGAGCAGGCTTGCCTATCTCAATCCCATGAACTTATTGCAGGTTGAGGTACTTAAGAGATTGAGAAGCGATGATGATAATAAACAACTCAGAGATGCCTTGCTAATCACAATCAACGGGATCGCTGCAGGGATGAGGAATACAGGCTAA

Protein Analysis

1035

Amino Acids

116.69

Weight (kDa)

6.98

Isoelectric Point (pI)

53.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEPcase PF00311 18 - 329 3e-83 Phosphoenolpyruvate carboxylase
PEPcase PF00311 437 - 1035 2.6e-228 Phosphoenolpyruvate carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2989
AccB1I GGYRCC 2 cut(s) 624, 2844
AccB7I CCANNNNNTGG 2 cut(s) 1940, 2031
AccI GTMKAC 4 cut(s) 132, 328, 1624, 2487
AccII CGCG 1 cut(s) 659
AccIII TCCGGA 1 cut(s) 1174
AciI CCGC 9 cut(s) 136, 179, 197, 659, 1049, 1739, 1798, 2267, 2566
AcoI YGGCCR 1 cut(s) 277
AcsI RAATTY 5 cut(s) 908, 1137, 1706, 2327, 2501
AcuI CTGAAG 3 cut(s) 327, 573, 2733
AcyI GRCGYC 2 cut(s) 625, 2845
AfaI GTAC 7 cut(s) 699, 1785, 2036, 2287, 2319, 2732, 3009
AfiI CCNNNNNNNGG 7 cut(s) 927, 1003, 1148, 1879, 1940, 2031, 2443
AflII CTTAAG 1 cut(s) 3011
AgsI TTSAA 7 cut(s) 575, 667, 914, 1136, 1973, 2258, 2722
AhdI GACNNNNNGTC 1 cut(s) 1742
AjnI CCWGG 7 cut(s) 84, 1269, 1939, 2269, 2517, 2532, 2677
AjuI GAANNNNNNNTTGG 4 cut(s) 1092, 1124, 2882, 2914
AloI GAACNNNNNNTCC 2 cut(s) 23, 55
Alw21I GWGCWC 4 cut(s) 115, 192, 1725, 2046
Alw26I GTCTC 6 cut(s) 413, 853, 1209, 1241, 1750, 2836
AlwNI CAGNNNCTG 1 cut(s) 385
Ama87I CYCGRG 1 cut(s) 2415
Aor13HI TCCGGA 1 cut(s) 1174
AoxI GGCC 3 cut(s) 277, 2236, 2741
ApaI GGGCCC 1 cut(s) 2240
ApoI RAATTY 5 cut(s) 908, 1137, 1706, 2327, 2501
AseI ATTAAT 2 cut(s) 474, 1577
Asp700I GAANNNNTTC 1 cut(s) 2584
AspLEI GCGC 3 cut(s) 627, 659, 2847
AspS9I GGNCC 6 cut(s) 406, 1172, 1281, 2236, 2237, 2675
AsuC2I CCSGG 1 cut(s) 404
AsuHPI GGTGA 5 cut(s) 580, 812, 1740, 2089, 2867
AsuII TTCGAA 2 cut(s) 51, 233
AsuNHI GCTAGC 3 cut(s) 175, 217, 653
AvaI CYCGRG 1 cut(s) 2415
AvaII GGWCC 4 cut(s) 406, 1172, 1281, 2675
BaeGI GKGCMC 2 cut(s) 1673, 2240
BamHI GGATCC 1 cut(s) 1515
BanI GGYRCC 2 cut(s) 624, 2844
BanII GRGCYC 3 cut(s) 115, 1725, 2240
BarI GAAGNNNNNNTAC 4 cut(s) 1543, 1575, 2554, 2586
BauI CACGAG 1 cut(s) 267
BbsI GAAGAC 4 cut(s) 60, 1385, 1393, 2721
Bbv12I GWGCWC 4 cut(s) 115, 192, 1725, 2046
BceAI ACGGC 1 cut(s) 1895
BciT130I CCWGG 7 cut(s) 86, 1271, 1941, 2271, 2519, 2534, 2679
BciVI GTATCC 2 cut(s) 1783, 2081
BclI TGATCA 2 cut(s) 1081, 2007
BcnI CCSGG 1 cut(s) 404
BcoDI GTCTC 6 cut(s) 413, 853, 1209, 1241, 1750, 2836
BfmI CTRYAG 4 cut(s) 139, 386, 2589, 3084
BfoI RGCGCY 2 cut(s) 628, 2848
BfrI CTTAAG 1 cut(s) 3011
BfuAI ACCTGC 1 cut(s) 2989
BfuI GTATCC 2 cut(s) 1783, 2081
BglII AGATCT 3 cut(s) 1187, 1322, 2448
BlpI GCTNAGC 2 cut(s) 1809, 2538
BmcAI AGTACT 1 cut(s) 1785
Bme1390I CCNGG 8 cut(s) 86, 404, 1271, 1941, 2271, 2519, 2534, 2679
Bme18I GGWCC 4 cut(s) 406, 1172, 1281, 2675
BmeRI GACNNNNNGTC 1 cut(s) 1742
BmeT110I CYCGRG 1 cut(s) 2415
BmgT120I GGNCC 6 cut(s) 406, 1172, 1281, 2236, 2237, 2675
BmiI GGNNCC 7 cut(s) 626, 1517, 1962, 2237, 2238, 2549, 2846
BmrFI CCNGG 8 cut(s) 86, 404, 1271, 1941, 2271, 2519, 2534, 2679
BmrI ACTGGG 1 cut(s) 1158
BmsI GCATC 7 cut(s) 353, 992, 1633, 1888, 2077, 2098, 3043
BmtI GCTAGC 3 cut(s) 179, 221, 657
BmuI ACTGGG 1 cut(s) 1158
BoxI GACNNNNGTC 1 cut(s) 1593
BpiI GAAGAC 4 cut(s) 60, 1385, 1393, 2721
BplI GAGNNNNNCTC 4 cut(s) 20, 52, 2435, 2467
BpmI CTGGAG 2 cut(s) 107, 227
Bpu10I CCTNAGC 1 cut(s) 620
Bpu1102I GCTNAGC 2 cut(s) 1809, 2538
Bpu14I TTCGAA 2 cut(s) 51, 233
BpuEI CTTGAG 3 cut(s) 2008, 2133, 2965
BpuMI CCSGG 1 cut(s) 404
BsaBI GATNNNNATC 2 cut(s) 813, 1428
BsaHI GRCGYC 2 cut(s) 625, 2845
BsaJI CCNNGG 5 cut(s) 27, 402, 1269, 2532, 2618
BsaWI WCCGGW 1 cut(s) 1174
BsaXI ACNNNNNCTCC 4 cut(s) 1824, 1854, 2301, 2331
Bsc4I CCNNNNNNNGG 7 cut(s) 927, 1003, 1148, 1879, 1940, 2031, 2443
Bse1I ACTGG 8 cut(s) 641, 748, 957, 1153, 1284, 1707, 1791, 2752
Bse3DI GCAATG 7 cut(s) 300, 730, 1111, 1239, 1800, 2179, 2393
Bse8I GATNNNNATC 2 cut(s) 813, 1428
BseAI TCCGGA 1 cut(s) 1174
BseBI CCWGG 7 cut(s) 86, 1271, 1941, 2271, 2519, 2534, 2679
BseDI CCNNGG 5 cut(s) 27, 402, 1269, 2532, 2618
BseJI GATNNNNATC 2 cut(s) 813, 1428
BseLI CCNNNNNNNGG 7 cut(s) 927, 1003, 1148, 1879, 1940, 2031, 2443
BseMI GCAATG 7 cut(s) 300, 730, 1111, 1239, 1800, 2179, 2393
BseNI ACTGG 8 cut(s) 641, 748, 957, 1153, 1284, 1707, 1791, 2752
BseRI GAGGAG 6 cut(s) 263, 2007, 2226, 2403, 2459, 2962
BseSI GKGCMC 2 cut(s) 1673, 2240
BseYI CCCAGC 1 cut(s) 2262
BsgI GTGCAG 2 cut(s) 441, 952
Bsh1236I CGCG 1 cut(s) 659
Bsh1285I CGRYCG 1 cut(s) 136
BshFI GGCC 3 cut(s) 279, 2238, 2743
BshNI GGYRCC 2 cut(s) 624, 2844
BsiEI CGRYCG 1 cut(s) 136
BsiHKAI GWGCWC 4 cut(s) 115, 192, 1725, 2046
BsiHKCI CYCGRG 1 cut(s) 2415
BsiSI CCGG 2 cut(s) 404, 1175
BslFI GGGAC 2 cut(s) 1252, 2718
BslI CCNNNNNNNGG 7 cut(s) 927, 1003, 1148, 1879, 1940, 2031, 2443
BsmAI GTCTC 6 cut(s) 413, 853, 1209, 1241, 1750, 2836
BsmBI CGTCTC 1 cut(s) 2836
BsmFI GGGAC 2 cut(s) 1252, 2718
BsmI GAATGC 1 cut(s) 1106
BsnI GGCC 3 cut(s) 279, 2238, 2743
BsoBI CYCGRG 1 cut(s) 2415
Bsp119I TTCGAA 2 cut(s) 51, 233
Bsp120I GGGCCC 1 cut(s) 2236
Bsp1286I GDGCHC 6 cut(s) 115, 192, 1673, 1725, 2046, 2240
Bsp13I TCCGGA 1 cut(s) 1174
Bsp1407I TGTACA 1 cut(s) 2730
Bsp1720I GCTNAGC 2 cut(s) 1809, 2538
Bsp19I CCATGG 1 cut(s) 2618
BspACI CCGC 9 cut(s) 136, 179, 197, 659, 1049, 1739, 1798, 2267, 2566
BspANI GGCC 3 cut(s) 279, 2238, 2743
BspEI TCCGGA 1 cut(s) 1174
BspFNI CGCG 1 cut(s) 659
BspLI GGNNCC 7 cut(s) 626, 1517, 1962, 2237, 2238, 2549, 2846
BspMAI CTGCAG 2 cut(s) 390, 3088
BspMI ACCTGC 1 cut(s) 2989
BspOI GCTAGC 3 cut(s) 179, 221, 657
BspT104I TTCGAA 2 cut(s) 51, 233
BspT107I GGYRCC 2 cut(s) 624, 2844
BspTI CTTAAG 1 cut(s) 3011
BsrDI GCAATG 7 cut(s) 300, 730, 1111, 1239, 1800, 2179, 2393
BsrGI TGTACA 1 cut(s) 2730
BsrI ACTGG 8 cut(s) 641, 748, 957, 1153, 1284, 1707, 1791, 2752
BssECI CCNNGG 5 cut(s) 27, 402, 1269, 2532, 2618
BssNI GRCGYC 2 cut(s) 625, 2845
BssSI CACGAG 1 cut(s) 267
BssT1I CCWWGG 1 cut(s) 2618
Bst2BI CACGAG 1 cut(s) 267
Bst2UI CCWGG 7 cut(s) 86, 1271, 1941, 2271, 2519, 2534, 2679
Bst4CI ACNGT 3 cut(s) 424, 1679, 1978
Bst6I CTCTTC 3 cut(s) 549, 1227, 1546
BstACI GRCGYC 2 cut(s) 625, 2845
BstAFI CTTAAG 1 cut(s) 3011
BstAPI GCANNNNNTGC 2 cut(s) 1101, 1907
BstAUI TGTACA 1 cut(s) 2730
BstBI TTCGAA 2 cut(s) 51, 233
BstDSI CCRYGG 1 cut(s) 2618
BstENI CCTNNNNNAGG 1 cut(s) 2441
BstFNI CGCG 1 cut(s) 659
BstH2I RGCGCY 2 cut(s) 628, 2848
BstHHI GCGC 3 cut(s) 627, 659, 2847
BstMAI GTCTC 6 cut(s) 413, 853, 1209, 1241, 1750, 2836
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 9 cut(s) 158, 211, 388, 939, 1101, 1303, 1591, 1859, 1907
BstNI CCWGG 7 cut(s) 86, 1271, 1941, 2271, 2519, 2534, 2679
BstNSI RCATGY 3 cut(s) 1485, 1631, 2172
BstPAI GACNNNNGTC 1 cut(s) 1593
BstSCI CCNGG 8 cut(s) 84, 402, 1269, 1939, 2269, 2517, 2532, 2677
BstSFI CTRYAG 4 cut(s) 139, 386, 2589, 3084
BstSLI GKGCMC 2 cut(s) 1673, 2240
BstUI CGCG 1 cut(s) 659
BstV2I GAAGAC 4 cut(s) 60, 1385, 1393, 2721
BstX2I RGATCY 8 cut(s) 963, 1187, 1322, 1411, 1508, 1515, 2448, 2940
BstXI CCANNNNNNTGG 2 cut(s) 1660, 2270
BstYI RGATCY 8 cut(s) 963, 1187, 1322, 1411, 1508, 1515, 2448, 2940
BsuI GTATCC 2 cut(s) 1783, 2081
BsuRI GGCC 3 cut(s) 279, 2238, 2743
BtgI CCRYGG 1 cut(s) 2618
BtgZI GCGATG 1 cut(s) 3042
BtsIMutI CAGTG 7 cut(s) 741, 1019, 1095, 1472, 1684, 2010, 2709
BveI ACCTGC 1 cut(s) 2989
CaiI CAGNNNCTG 1 cut(s) 385
CfoI GCGC 3 cut(s) 627, 659, 2847
Cfr13I GGNCC 6 cut(s) 406, 1172, 1281, 2236, 2237, 2675
CseI GACGC 3 cut(s) 210, 1583, 2387
CsiI ACCWGGT 1 cut(s) 2677
Csp6I GTAC 7 cut(s) 698, 1784, 2035, 2286, 2318, 2731, 3008
CspCI CAANNNNNGTGG 2 cut(s) 625, 660
CviQI GTAC 7 cut(s) 698, 1784, 2035, 2286, 2318, 2731, 3008
DinI GGCGCC 2 cut(s) 626, 2846
DraI TTTAAA 2 cut(s) 528, 732
DriI GACNNNNNGTC 1 cut(s) 1742
EaeI YGGCCR 1 cut(s) 277
Eam1104I CTCTTC 3 cut(s) 549, 1227, 1546
Eam1105I GACNNNNNGTC 1 cut(s) 1742
EarI CTCTTC 3 cut(s) 549, 1227, 1546
EciI GGCGGA 1 cut(s) 212
Ecl136II GAGCTC 2 cut(s) 113, 1723
Eco130I CCWWGG 1 cut(s) 2618
Eco24I GRGCYC 3 cut(s) 115, 1725, 2240
Eco32I GATATC 2 cut(s) 22, 2185
Eco47I GGWCC 4 cut(s) 406, 1172, 1281, 2675
Eco53kI GAGCTC 2 cut(s) 113, 1723
Eco57I CTGAAG 3 cut(s) 327, 573, 2733
Eco88I CYCGRG 1 cut(s) 2415
EcoICRI GAGCTC 2 cut(s) 113, 1723
EcoNI CCTNNNNNAGG 1 cut(s) 2441
EcoO109I RGGNCCY 2 cut(s) 2236, 2237
EcoRI GAATTC 1 cut(s) 2501
EcoRII CCWGG 7 cut(s) 84, 1269, 1939, 2269, 2517, 2532, 2677
EcoRV GATATC 2 cut(s) 22, 2185
EcoT14I CCWWGG 1 cut(s) 2618
EcoT38I GRGCYC 3 cut(s) 115, 1725, 2240
EgeI GGCGCC 2 cut(s) 626, 2846
EheI GGCGCC 2 cut(s) 626, 2846
ErhI CCWWGG 1 cut(s) 2618
Esp3I CGTCTC 1 cut(s) 2836
FalI AAGNNNNNCTT 4 cut(s) 1356, 1388, 1574, 1606
FaqI GGGAC 2 cut(s) 1252, 2718
FauI CCCGC 2 cut(s) 172, 652
FauNDI CATATG 1 cut(s) 1837
FbaI TGATCA 2 cut(s) 1081, 2007
FblI GTMKAC 4 cut(s) 132, 328, 1624, 2487
FriOI GRGCYC 3 cut(s) 115, 1725, 2240
GlaI GCGC 3 cut(s) 626, 658, 2846
GsaI CCCAGC 1 cut(s) 2266
GsuI CTGGAG 2 cut(s) 107, 227
HaeII RGCGCY 2 cut(s) 628, 2848
HaeIII GGCC 3 cut(s) 279, 2238, 2743
HapII CCGG 2 cut(s) 404, 1175
HgaI GACGC 3 cut(s) 210, 1583, 2387
HhaI GCGC 3 cut(s) 627, 659, 2847
Hin1I GRCGYC 2 cut(s) 625, 2845
Hin6I GCGC 3 cut(s) 625, 657, 2845
HinP1I GCGC 3 cut(s) 625, 657, 2845
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 2 cut(s) 1295, 1370
HinfI GANTC 8 cut(s) 977, 1178, 1265, 1490, 1616, 1823, 2096, 2635
HpaII CCGG 2 cut(s) 404, 1175
HphI GGTGA 5 cut(s) 580, 812, 1740, 2089, 2867
Hpy166II GTNNAC 6 cut(s) 133, 329, 1625, 2488, 2757, 2912
Hpy8I GTNNAC 6 cut(s) 133, 329, 1625, 2488, 2757, 2912
Hpy99I CGWCG 3 cut(s) 16, 226, 717
HpyAV CCTTC 5 cut(s) 1272, 1804, 1975, 2695, 2782
HpyCH4III ACNGT 3 cut(s) 424, 1679, 1978
HpyCH4IV ACGT 2 cut(s) 712, 2796
HpyF10VI GCNNNNNNNGC 9 cut(s) 158, 211, 388, 939, 1101, 1303, 1591, 1859, 1907
HpySE526I ACGT 2 cut(s) 712, 2796
Hsp92I GRCGYC 2 cut(s) 625, 2845
HspAI GCGC 3 cut(s) 625, 657, 2845
KasI GGCGCC 2 cut(s) 624, 2844
Kpn2I TCCGGA 1 cut(s) 1174
Ksp22I TGATCA 2 cut(s) 1081, 2007
LweI GCATC 7 cut(s) 353, 992, 1633, 1888, 2077, 2098, 3043
MabI ACCWGGT 1 cut(s) 2677
MaeII ACGT 2 cut(s) 712, 2796
MaeIII GTNAC 4 cut(s) 823, 835, 2191, 2432
MfeI CAATTG 1 cut(s) 1329
MflI RGATCY 8 cut(s) 963, 1187, 1322, 1411, 1508, 1515, 2448, 2940
MhlI GDGCHC 6 cut(s) 115, 192, 1673, 1725, 2046, 2240
Mly113I GGCGCC 2 cut(s) 625, 2845
MlyI GAGTC 4 cut(s) 1172, 1274, 1484, 2629
MmeI TCCRAC 6 cut(s) 88, 204, 1082, 1255, 2065, 2653
MroI TCCGGA 1 cut(s) 1174
MroXI GAANNNNTTC 1 cut(s) 2584
MseI TTAA 8 cut(s) 474, 527, 731, 1428, 1577, 1776, 2684, 3012
MslI CAYNNNNRTG 3 cut(s) 2774, 2817, 2853
MspA1I CMGCKG 1 cut(s) 2378
MspCI CTTAAG 1 cut(s) 3011
MspI CCGG 2 cut(s) 404, 1175
MspR9I CCNGG 8 cut(s) 86, 404, 1271, 1941, 2271, 2519, 2534, 2679
MunI CAATTG 1 cut(s) 1329
Mva1269I GAATGC 1 cut(s) 1106
MvaI CCWGG 7 cut(s) 86, 1271, 1941, 2271, 2519, 2534, 2679
MvnI CGCG 1 cut(s) 659
MwoI GCNNNNNNNGC 9 cut(s) 158, 211, 388, 939, 1101, 1303, 1591, 1859, 1907
NarI GGCGCC 2 cut(s) 625, 2845
NciI CCSGG 1 cut(s) 404
NcoI CCATGG 1 cut(s) 2618
NdeI CATATG 1 cut(s) 1837
NheI GCTAGC 3 cut(s) 175, 217, 653
NlaIV GGNNCC 7 cut(s) 626, 1517, 1962, 2237, 2238, 2549, 2846
NmeAIII GCCGAG 2 cut(s) 51, 52
NmuCI GTSAC 2 cut(s) 823, 835
NspI RCATGY 3 cut(s) 1485, 1631, 2172
NspV TTCGAA 2 cut(s) 51, 233
PaeI GCATGC 1 cut(s) 2172
PaeR7I CTCGAG 1 cut(s) 2415
PcsI WCGNNNNNNNCGW 2 cut(s) 24, 230
PctI GAATGC 1 cut(s) 1106
PdmI GAANNNNTTC 1 cut(s) 2584
PfeI GAWTC 4 cut(s) 977, 1616, 1823, 2096
PflMI CCANNNNNTGG 2 cut(s) 1940, 2031
PfoI TCCNGGA 2 cut(s) 84, 2517
PleI GAGTC 4 cut(s) 1172, 1273, 1484, 2629
PluTI GGCGCC 2 cut(s) 628, 2848
PpsI GAGTC 4 cut(s) 1172, 1273, 1484, 2629
PshAI GACNNNNGTC 1 cut(s) 1593
PshBI ATTAAT 2 cut(s) 474, 1577
Psp124BI GAGCTC 2 cut(s) 115, 1725
Psp6I CCWGG 7 cut(s) 84, 1269, 1939, 2269, 2517, 2532, 2677
PspFI CCCAGC 1 cut(s) 2262
PspGI CCWGG 7 cut(s) 84, 1269, 1939, 2269, 2517, 2532, 2677
PspN4I GGNNCC 7 cut(s) 626, 1517, 1962, 2237, 2238, 2549, 2846
PspOMI GGGCCC 1 cut(s) 2236
PspPI GGNCC 6 cut(s) 406, 1172, 1281, 2236, 2237, 2675
PstI CTGCAG 2 cut(s) 390, 3088
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 8 cut(s) 963, 1187, 1322, 1411, 1508, 1515, 2448, 2940
PvuII CAGCTG 1 cut(s) 2378
RsaI GTAC 7 cut(s) 699, 1785, 2036, 2287, 2319, 2732, 3009
RsaNI GTAC 7 cut(s) 698, 1784, 2035, 2286, 2318, 2731, 3008
RseI CAYNNNNRTG 3 cut(s) 2774, 2817, 2853
SacI GAGCTC 2 cut(s) 115, 1725
SalI GTCGAC 1 cut(s) 131
SaqAI TTAA 8 cut(s) 474, 527, 731, 1428, 1577, 1776, 2684, 3012
Sau96I GGNCC 6 cut(s) 406, 1172, 1281, 2236, 2237, 2675
ScaI AGTACT 1 cut(s) 1785
SchI GAGTC 4 cut(s) 1172, 1274, 1484, 2629
ScrFI CCNGG 8 cut(s) 86, 404, 1271, 1941, 2271, 2519, 2534, 2679
SduI GDGCHC 6 cut(s) 115, 192, 1673, 1725, 2046, 2240
SexAI ACCWGGT 1 cut(s) 2677
SfaNI GCATC 7 cut(s) 353, 992, 1633, 1888, 2077, 2098, 3043
SfcI CTRYAG 4 cut(s) 139, 386, 2589, 3084
SfoI GGCGCC 2 cut(s) 626, 2846
Sfr274I CTCGAG 1 cut(s) 2415
SfuI TTCGAA 2 cut(s) 51, 233
SinI GGWCC 4 cut(s) 406, 1172, 1281, 2675
SlaI CTCGAG 1 cut(s) 2415
SmiMI CAYNNNNRTG 3 cut(s) 2774, 2817, 2853
SmlI CTYRAG 5 cut(s) 1987, 2148, 2415, 2944, 3011
SmoI CTYRAG 5 cut(s) 1987, 2148, 2415, 2944, 3011
SphI GCATGC 1 cut(s) 2172
SsiI CCGC 9 cut(s) 136, 179, 197, 659, 1049, 1739, 1798, 2267, 2566
SspDI GGCGCC 2 cut(s) 624, 2844
SspI AATATT 1 cut(s) 1658
SstI GAGCTC 2 cut(s) 115, 1725
StyD4I CCNGG 8 cut(s) 84, 402, 1269, 1939, 2269, 2517, 2532, 2677
StyI CCWWGG 1 cut(s) 2618
TaaI ACNGT 3 cut(s) 424, 1679, 1978
TaiI ACGT 2 cut(s) 715, 2799
TaqI TCGA 9 cut(s) 51, 132, 233, 441, 889, 1144, 1587, 2416, 2958
TaqII GACCGA 1 cut(s) 549
TatI WGTACW 2 cut(s) 1783, 2730
TauI GCSGC 3 cut(s) 1052, 2269, 2568
TfiI GAWTC 4 cut(s) 977, 1616, 1823, 2096
Tru1I TTAA 8 cut(s) 474, 527, 731, 1428, 1577, 1776, 2684, 3012
Tru9I TTAA 8 cut(s) 474, 527, 731, 1428, 1577, 1776, 2684, 3012
TscAI CASTG 7 cut(s) 748, 1019, 1102, 1479, 1684, 2010, 2716
TseFI GTSAC 2 cut(s) 823, 835
Tsp45I GTSAC 2 cut(s) 823, 835
TspGWI ACGGA 3 cut(s) 20, 29, 2315
TspRI CASTG 7 cut(s) 748, 1019, 1102, 1479, 1684, 2010, 2716
Van91I CCANNNNNTGG 2 cut(s) 1940, 2031
Vha464I CTTAAG 1 cut(s) 3011
VpaK11BI GGWCC 4 cut(s) 406, 1172, 1281, 2675
VspI ATTAAT 2 cut(s) 474, 1577
XagI CCTNNNNNAGG 1 cut(s) 2441
XapI RAATTY 5 cut(s) 908, 1137, 1706, 2327, 2501
XbaI TCTAGA 1 cut(s) 1405
XceI RCATGY 3 cut(s) 1485, 1631, 2172
XcmI CCANNNNNNNNNTGG 1 cut(s) 2540
XhoI CTCGAG 1 cut(s) 2415
XmiI GTMKAC 4 cut(s) 132, 328, 1624, 2487
XmnI GAANNNNTTC 1 cut(s) 2584
ZrmI AGTACT 1 cut(s) 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.