FvH4_7g20350

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
16559115 .. 16561334
2220 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g20350.t2

Sequence Viewer

Length: 1713 bp
ATGGAAGTTGAAGGGAAGCTCTCTATTCACTCCACATCCAAAGAAGAAAAAGGAGAAGTTATTCATAAGGTATGCGATGAGAATGAGGACTCTCAAGGAGGCAGCTGGACTACCTTTCCCTTTGTTATTGCAACTGTGCTGGGTCTCACAGTAGCAGCCGGCGGGTGGGGAGCTAATTTGATAGTGTTTCTGATAACAAAATTCAATGTGAAGACCATAACCGCAACAAAGATCAATAACATCATCCTTGGTACCAACAATCTCTTCCCCATTGCCGGAGCCTTCATCGCCGATTCATTCTTCACCACCTTTTCCGTCGTCGGTGCCTTTTCCTTCATTTCTTTACTGGGTGTGATCATGTTGACACTAATAGCGACTATCCCTTCCTTGAGGCCCTCACCATGTCCAATTGGCTCACTTATTACATGTCAAGCTCCATCAAAGCTTCAATACTCAGCCCTATATGTTGCATTATCACTAGCTTCGCTAGGACTTGGAGGCACCCGCTTCACAATTGCAACAATGGGAGCAGACCAATTCAACAATCCGACCGATCAAGGGGTTTTCTTTAATTGGTATTTTGTGGCATTGTATATGGCCATTGTCTTTAGCGGCACTGCCATCGTATATATTCAAGACAACGTGGGATGGGGATTAGGGTTTGGAATTTGCTGCATTGCAAATGGTATTGGATTAGGGGTGTTCTCATTGGGGAAACGATTTTATAAGCAAGTAAAACCAAAGGGGAGTCCATTCTTGAGCATAGCACGAGTATTGGTTGCAGCAGTTCGAAAGCGCAAGATGTCATCACGAACTTCAACAGAACCTGATTACTATTATGGCGCAGGAGCAAATGCGAATGCGATGACTGACAATCCACCAACTACAAGTTTGAGTTTTCTGAACTGTGCGGCCTTGAAAATTGAAGATGACAAACAATTTGAAGGCTCGTATGGAAACCCATGGGGGCTATGCACTGTTGAAGAAGTGGAAGACCTCAAAACCGTAATTAAGATCATGCCATTGTGGTCTACTGGCATCTTCGTAAGCACTCCAATAGCCATTATCTGCAGCCTTACTATACTTCAAGCCCTAACCATGGATAGACACCTTGGTCCACACTTCGAAATCCCTGCTGCTACATTTCTGGTGTTCACCCTTTTCTCCACAGCCATCTGCATCTTTATAATCGACCGCTTCATACTCCTCAAGTACAAGAATCTCACTGGACAAACTTTAACATCAATTCAGCGAATAGGAATCGGTCACATTATCAACATTATGTCCTTTGCTGGGGCTGCCCTAGTAGAAAGAAGACGACTTGGAGTGGTTAGAGCACATAGCCTCATGAACCAACCAGGTTCAGAGGTGCCCATGTCCGCCCTTTGGCTTGTGGCGCCATTATCTGTTTTGGGACTCGCTGAGTCATTTCATTTCCCGGGACAAGTTTCATTGTGCTATCAAGAATTTCCAAAATCATTGAGAAGTACATCCACTGCTATGATCTCATTGTTACTTGGGATCGGGTATTATCTTTGCACTGCAGTCACTGATTTGGTAGACAAGACTACGAATTGGTTGCCGGATGATATAAATCAAGGGCGGTTGGATAATGTATATTGGATGTTGGTGGTGATCGGGGTTGTGAATTTTGGTTACTACATGACTTGTGCCAAGGTCTTTGTGTCCCAAAACCAAAATGTTGTGAAATAA

Protein Analysis

571

Amino Acids

61.99

Weight (kDa)

8.35

Isoelectric Point (pI)

34.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 3 - 406 6.7e-63 POT family
MFS_1 PF07690 32 - 391 3.9e-07 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000296)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 726, 1187
AasI GACNNNNNNGTC 1 cut(s) 1113
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 5 cut(s) 251, 323, 500, 1369, 1396
AccI GTMKAC 2 cut(s) 1031, 1560
AciI CCGC 8 cut(s) 162, 222, 505, 612, 911, 1195, 1380, 1603
AclWI GGATC 1 cut(s) 1529
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 4 cut(s) 200, 666, 1466, 1648
AcyI GRCGYC 1 cut(s) 1397
AfaI GTAC 3 cut(s) 253, 1214, 1489
AfiI CCNNNNNNNGG 6 cut(s) 165, 275, 558, 1099, 1293, 1386
AflIII ACRYGT 1 cut(s) 425
AjnI CCWGG 1 cut(s) 1357
AjuI GAANNNNNNNTTGG 2 cut(s) 248, 280
AluBI AGCT 6 cut(s) 19, 105, 173, 434, 445, 482
AluI AGCT 6 cut(s) 19, 105, 173, 434, 445, 482
Alw21I GWGCWC 1 cut(s) 1339
Alw26I GTCTC 1 cut(s) 149
AlwI GGATC 1 cut(s) 1529
AlwNI CAGNNNCTG 2 cut(s) 827, 1550
Ama87I CYCGRG 1 cut(s) 1438
AoxI GGCC 3 cut(s) 392, 597, 912
ApeKI GCWGC 7 cut(s) 102, 155, 672, 782, 1071, 1136, 1298
ApoI RAATTY 4 cut(s) 200, 666, 1466, 1648
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
Asp700I GAANNNNTTC 1 cut(s) 60
Asp718I GGTACC 1 cut(s) 251
AspLEI GCGC 3 cut(s) 798, 845, 1399
AspS9I GGNCC 2 cut(s) 393, 1115
AsuC2I CCSGG 2 cut(s) 1439, 1440
AsuHPI GGTGA 4 cut(s) 295, 390, 1147, 1645
AsuII TTCGAA 2 cut(s) 790, 1125
AvaI CYCGRG 1 cut(s) 1438
AvaII GGWCC 1 cut(s) 1115
BaeGI GKGCMC 1 cut(s) 1374
BalI TGGCCA 1 cut(s) 599
BanI GGYRCC 5 cut(s) 251, 323, 500, 1369, 1396
BauI CACGAG 1 cut(s) 768
BbsI GAAGAC 3 cut(s) 218, 999, 1321
Bbv12I GWGCWC 1 cut(s) 1339
BbvI GCAGC 7 cut(s) 114, 167, 659, 794, 1083, 1123, 1285
BccI CCATC 4 cut(s) 445, 629, 642, 1181
BcgI CGANNNNNNTGC 6 cut(s) 604, 638, 1115, 1149, 1561, 1595
BciT130I CCWGG 1 cut(s) 1359
BclI TGATCA 1 cut(s) 354
BcnI CCSGG 2 cut(s) 1439, 1440
BcoDI GTCTC 1 cut(s) 149
BfaI CTAG 3 cut(s) 479, 488, 1304
BfmI CTRYAG 2 cut(s) 1069, 1542
BfoI RGCGCY 1 cut(s) 1400
BisI GCNGC 9 cut(s) 103, 156, 613, 673, 783, 912, 1072, 1137, 1299
BlsI GCNGC 9 cut(s) 104, 157, 614, 674, 784, 913, 1073, 1138, 1300
Bme1390I CCNGG 3 cut(s) 1359, 1439, 1440
Bme18I GGWCC 1 cut(s) 1115
BmeT110I CYCGRG 1 cut(s) 1438
BmgT120I GGNCC 2 cut(s) 393, 1115
BmiI GGNNCC 6 cut(s) 253, 280, 325, 502, 1371, 1398
BmrFI CCNGG 3 cut(s) 1359, 1439, 1440
BmrI ACTGGG 1 cut(s) 356
BmsI GCATC 2 cut(s) 1047, 1188
BmuI ACTGGG 1 cut(s) 356
BpiI GAAGAC 3 cut(s) 218, 999, 1321
Bpu14I TTCGAA 2 cut(s) 790, 1125
BpuEI CTTGAG 4 cut(s) 78, 409, 778, 1193
BpuMI CCSGG 2 cut(s) 1439, 1440
BsaBI GATNNNNATC 1 cut(s) 1593
BsaHI GRCGYC 1 cut(s) 1397
BsaI GGTCTC 1 cut(s) 149
BsaJI CCNNGG 6 cut(s) 247, 962, 1098, 1111, 1438, 1674
Bsc4I CCNNNNNNNGG 6 cut(s) 165, 275, 558, 1099, 1293, 1386
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 3 cut(s) 351, 1039, 1231
Bse3DI GCAATG 2 cut(s) 270, 675
Bse8I GATNNNNATC 1 cut(s) 1593
BseBI CCWGG 1 cut(s) 1359
BseDI CCNNGG 6 cut(s) 247, 962, 1098, 1111, 1438, 1674
BseGI GGATG 6 cut(s) 35, 243, 653, 1490, 1591, 1629
BseJI GATNNNNATC 1 cut(s) 1593
BseLI CCNNNNNNNGG 6 cut(s) 165, 275, 558, 1099, 1293, 1386
BseMI GCAATG 2 cut(s) 270, 675
BseMII CTCAG 2 cut(s) 468, 1413
BseNI ACTGG 3 cut(s) 351, 1039, 1231
BseRI GAGGAG 1 cut(s) 1196
BseSI GKGCMC 1 cut(s) 1374
BseXI GCAGC 7 cut(s) 114, 167, 659, 794, 1083, 1123, 1285
BseYI CCCAGC 2 cut(s) 139, 1292
Bsh1285I CGRYCG 2 cut(s) 552, 1195
BshFI GGCC 3 cut(s) 394, 599, 914
BshNI GGYRCC 5 cut(s) 251, 323, 500, 1369, 1396
BsiEI CGRYCG 2 cut(s) 552, 1195
BsiHKAI GWGCWC 1 cut(s) 1339
BsiHKCI CYCGRG 1 cut(s) 1438
BsiSI CCGG 4 cut(s) 159, 276, 1439, 1583
BslFI GGGAC 3 cut(s) 1428, 1455, 1672
BslI CCNNNNNNNGG 6 cut(s) 165, 275, 558, 1099, 1293, 1386
BsmAI GTCTC 1 cut(s) 149
BsmFI GGGAC 3 cut(s) 1428, 1455, 1672
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 3 cut(s) 394, 599, 914
Bso31I GGTCTC 1 cut(s) 149
BsoBI CYCGRG 1 cut(s) 1438
Bsp119I TTCGAA 2 cut(s) 790, 1125
Bsp1286I GDGCHC 2 cut(s) 1339, 1374
Bsp143I GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
Bsp19I CCATGG 2 cut(s) 962, 1098
BspACI CCGC 8 cut(s) 162, 222, 505, 612, 911, 1195, 1380, 1603
BspANI GGCC 3 cut(s) 394, 599, 914
BspCNI CTCAG 2 cut(s) 467, 1414
BspHI TCATGA 1 cut(s) 1347
BspLI GGNNCC 6 cut(s) 253, 280, 325, 502, 1371, 1398
BspMAI CTGCAG 2 cut(s) 1073, 1546
BspPI GGATC 1 cut(s) 1529
BspT104I TTCGAA 2 cut(s) 790, 1125
BspT107I GGYRCC 5 cut(s) 251, 323, 500, 1369, 1396
BspTNI GGTCTC 1 cut(s) 149
BsrDI GCAATG 2 cut(s) 270, 675
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 3 cut(s) 351, 1039, 1231
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 6 cut(s) 247, 962, 1098, 1111, 1438, 1674
BssMI GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
BssNI GRCGYC 1 cut(s) 1397
BssSI CACGAG 1 cut(s) 768
BssT1I CCWWGG 5 cut(s) 247, 962, 1098, 1111, 1674
Bst2BI CACGAG 1 cut(s) 768
Bst2UI CCWGG 1 cut(s) 1359
Bst4CI ACNGT 5 cut(s) 136, 151, 908, 979, 1006
Bst6I CTCTTC 1 cut(s) 269
BstACI GRCGYC 1 cut(s) 1397
BstBI TTCGAA 2 cut(s) 790, 1125
BstC8I GCNNGC 1 cut(s) 160
BstDEI CTNAG 2 cut(s) 454, 1422
BstDSI CCRYGG 2 cut(s) 962, 1098
BstF5I GGATG 6 cut(s) 35, 243, 653, 1490, 1591, 1629
BstH2I RGCGCY 1 cut(s) 1400
BstHHI GCGC 3 cut(s) 798, 845, 1399
BstKTI GATC 7 cut(s) 234, 357, 556, 1017, 1506, 1524, 1638
BstMAI GTCTC 1 cut(s) 149
BstMBI GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
BstMCI CGRYCG 2 cut(s) 552, 1195
BstMWI GCNNNNNNNGC 3 cut(s) 287, 1298, 1396
BstNI CCWGG 1 cut(s) 1359
BstNSI RCATGY 1 cut(s) 429
BstSCI CCNGG 3 cut(s) 1357, 1437, 1438
BstSFI CTRYAG 2 cut(s) 1069, 1542
BstSLI GKGCMC 1 cut(s) 1374
BstV1I GCAGC 7 cut(s) 114, 167, 659, 794, 1083, 1123, 1285
BstV2I GAAGAC 3 cut(s) 218, 999, 1321
BsuRI GGCC 3 cut(s) 394, 599, 914
BtgI CCRYGG 2 cut(s) 962, 1098
BtgZI GCGATG 3 cut(s) 90, 271, 878
BtsCI GGATG 6 cut(s) 35, 243, 653, 1490, 1591, 1629
BtsI GCAGTG 3 cut(s) 615, 1494, 1539
BtsIMutI CAGTG 6 cut(s) 615, 975, 1224, 1494, 1539, 1548
Cac8I GCNNGC 1 cut(s) 160
CaiI CAGNNNCTG 2 cut(s) 827, 1550
CciI TCATGA 1 cut(s) 1347
CfoI GCGC 3 cut(s) 798, 845, 1399
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 2 cut(s) 393, 1115
Cfr9I CCCGGG 1 cut(s) 1438
CsiI ACCWGGT 1 cut(s) 1357
Csp6I GTAC 3 cut(s) 252, 1213, 1488
CviAII CATG 9 cut(s) 358, 402, 426, 963, 1018, 1099, 1348, 1375, 1663
CviQI GTAC 3 cut(s) 252, 1213, 1488
DdeI CTNAG 2 cut(s) 454, 1422
DinI GGCGCC 1 cut(s) 1398
DpnI GATC 7 cut(s) 233, 356, 555, 1016, 1505, 1523, 1637
DpnII GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
DrdI GACNNNNNNGTC 1 cut(s) 1113
DseDI GACNNNNNNGTC 1 cut(s) 1113
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 1 cut(s) 269
EarI CTCTTC 1 cut(s) 269
EciI GGCGGA 1 cut(s) 1369
Eco130I CCWWGG 5 cut(s) 247, 962, 1098, 1111, 1674
Eco31I GGTCTC 1 cut(s) 149
Eco47I GGWCC 1 cut(s) 1115
Eco88I CYCGRG 1 cut(s) 1438
EcoO109I RGGNCCY 1 cut(s) 393
EcoRII CCWGG 1 cut(s) 1357
EcoT14I CCWWGG 5 cut(s) 247, 962, 1098, 1111, 1674
EgeI GGCGCC 1 cut(s) 1398
EheI GGCGCC 1 cut(s) 1398
ErhI CCWWGG 5 cut(s) 247, 962, 1098, 1111, 1674
FaeI CATG 9 cut(s) 361, 405, 429, 966, 1021, 1102, 1351, 1378, 1666
FaqI GGGAC 3 cut(s) 1428, 1455, 1672
FatI CATG 9 cut(s) 357, 401, 425, 962, 1017, 1098, 1347, 1374, 1662
FauI CCCGC 2 cut(s) 155, 512
FbaI TGATCA 1 cut(s) 354
FblI GTMKAC 2 cut(s) 1031, 1560
Fnu4HI GCNGC 9 cut(s) 103, 156, 613, 673, 783, 912, 1072, 1137, 1299
FokI GGATG 6 cut(s) 22, 230, 660, 1477, 1598, 1636
Fsp4HI GCNGC 9 cut(s) 103, 156, 613, 673, 783, 912, 1072, 1137, 1299
FspBI CTAG 3 cut(s) 479, 488, 1304
GlaI GCGC 3 cut(s) 797, 844, 1398
GluI GCNGC 9 cut(s) 103, 156, 613, 673, 783, 912, 1072, 1137, 1299
GsaI CCCAGC 2 cut(s) 143, 1296
HaeII RGCGCY 1 cut(s) 1400
HaeIII GGCC 3 cut(s) 394, 599, 914
HapII CCGG 4 cut(s) 159, 276, 1439, 1583
HhaI GCGC 3 cut(s) 798, 845, 1399
Hin1I GRCGYC 1 cut(s) 1397
Hin1II CATG 9 cut(s) 361, 405, 429, 966, 1021, 1102, 1351, 1378, 1666
Hin6I GCGC 3 cut(s) 796, 843, 1397
HinP1I GCGC 3 cut(s) 796, 843, 1397
HincII GTYRAC 1 cut(s) 363
HindII GTYRAC 1 cut(s) 363
HindIII AAGCTT 1 cut(s) 443
HinfI GANTC 7 cut(s) 89, 293, 748, 1219, 1260, 1416, 1424
HpaII CCGG 4 cut(s) 159, 276, 1439, 1583
HphI GGTGA 4 cut(s) 295, 390, 1147, 1645
Hpy166II GTNNAC 5 cut(s) 363, 1032, 1118, 1155, 1561
Hpy188I TCNGA 4 cut(s) 192, 549, 903, 1366
Hpy188III TCNNGA 5 cut(s) 635, 757, 810, 1348, 1463
Hpy8I GTNNAC 5 cut(s) 363, 1032, 1118, 1155, 1561
Hpy99I CGWCG 2 cut(s) 320, 323
HpyAV CCTTC 5 cut(s) 5, 292, 343, 393, 938
HpyCH4III ACNGT 5 cut(s) 136, 151, 908, 979, 1006
HpyCH4IV ACGT 1 cut(s) 642
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 1298, 1396
HpyF3I CTNAG 2 cut(s) 454, 1422
HpySE526I ACGT 1 cut(s) 642
Hsp92I GRCGYC 1 cut(s) 1397
Hsp92II CATG 9 cut(s) 361, 405, 429, 966, 1021, 1102, 1351, 1378, 1666
HspAI GCGC 3 cut(s) 796, 843, 1397
KasI GGCGCC 1 cut(s) 1396
KpnI GGTACC 1 cut(s) 255
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 354
Kzo9I GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
LmnI GCTCC 5 cut(s) 170, 278, 439, 527, 848
Lsp1109I GCAGC 7 cut(s) 114, 167, 659, 794, 1083, 1123, 1285
LweI GCATC 2 cut(s) 1047, 1188
MabI ACCWGGT 1 cut(s) 1357
MaeI CTAG 3 cut(s) 479, 488, 1304
MaeII ACGT 1 cut(s) 642
MaeIII GTNAC 4 cut(s) 1265, 1512, 1546, 1655
MalI GATC 7 cut(s) 233, 356, 555, 1016, 1505, 1523, 1637
MboI GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
MboII GAAGA 9 cut(s) 56, 223, 256, 292, 938, 995, 1004, 1033, 1326
MfeI CAATTG 2 cut(s) 408, 513
MhlI GDGCHC 2 cut(s) 1339, 1374
MlsI TGGCCA 1 cut(s) 599
MluNI TGGCCA 1 cut(s) 599
Mly113I GGCGCC 1 cut(s) 1397
MlyI GAGTC 4 cut(s) 83, 757, 1410, 1433
MmeI TCCRAC 2 cut(s) 572, 1587
MnlI CCTC 9 cut(s) 79, 92, 384, 406, 491, 1007, 1217, 1355, 1360
Mox20I TGGCCA 1 cut(s) 599
MroNI GCCGGC 1 cut(s) 158
MroXI GAANNNNTTC 1 cut(s) 60
MscI TGGCCA 1 cut(s) 599
MseI TTAA 3 cut(s) 570, 1011, 1238
MslI CAYNNNNRTG 1 cut(s) 1499
Msp20I TGGCCA 1 cut(s) 599
MspA1I CMGCKG 1 cut(s) 105
MspI CCGG 4 cut(s) 159, 276, 1439, 1583
MspR9I CCNGG 3 cut(s) 1359, 1439, 1440
MunI CAATTG 2 cut(s) 408, 513
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 1 cut(s) 1359
MwoI GCNNNNNNNGC 3 cut(s) 287, 1298, 1396
NaeI GCCGGC 1 cut(s) 160
NarI GGCGCC 1 cut(s) 1397
NciI CCSGG 2 cut(s) 1439, 1440
NcoI CCATGG 2 cut(s) 962, 1098
NdeII GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
NgoMIV GCCGGC 1 cut(s) 158
NlaIII CATG 9 cut(s) 361, 405, 429, 966, 1021, 1102, 1351, 1378, 1666
NlaIV GGNNCC 6 cut(s) 253, 280, 325, 502, 1371, 1398
NmuCI GTSAC 2 cut(s) 1265, 1546
NspI RCATGY 1 cut(s) 429
NspV TTCGAA 2 cut(s) 790, 1125
PagI TCATGA 1 cut(s) 1347
PciI ACATGT 1 cut(s) 425
PctI GAATGC 1 cut(s) 865
PdiI GCCGGC 1 cut(s) 160
PdmI GAANNNNTTC 1 cut(s) 60
PfeI GAWTC 3 cut(s) 293, 1219, 1260
PkrI GCNGC 9 cut(s) 104, 157, 614, 674, 784, 913, 1073, 1138, 1300
PleI GAGTC 4 cut(s) 83, 756, 1410, 1432
PluTI GGCGCC 1 cut(s) 1400
PpsI GAGTC 4 cut(s) 83, 756, 1410, 1432
PscI ACATGT 1 cut(s) 425
PsiI TTATAA 2 cut(s) 726, 1187
Psp6I CCWGG 1 cut(s) 1357
PspFI CCCAGC 2 cut(s) 139, 1292
PspGI CCWGG 1 cut(s) 1357
PspN4I GGNNCC 6 cut(s) 253, 280, 325, 502, 1371, 1398
PspPI GGNCC 2 cut(s) 393, 1115
PstI CTGCAG 2 cut(s) 1073, 1546
PstNI CAGNNNCTG 2 cut(s) 827, 1550
PvuII CAGCTG 1 cut(s) 105
RsaI GTAC 3 cut(s) 253, 1214, 1489
RsaNI GTAC 3 cut(s) 252, 1213, 1488
RseI CAYNNNNRTG 1 cut(s) 1499
SaqAI TTAA 3 cut(s) 570, 1011, 1238
SatI GCNGC 9 cut(s) 103, 156, 613, 673, 783, 912, 1072, 1137, 1299
Sau3AI GATC 7 cut(s) 231, 354, 553, 1014, 1503, 1521, 1635
Sau96I GGNCC 2 cut(s) 393, 1115
SchI GAGTC 4 cut(s) 83, 757, 1410, 1433
ScrFI CCNGG 3 cut(s) 1359, 1439, 1440
SduI GDGCHC 2 cut(s) 1339, 1374
SexAI ACCWGGT 1 cut(s) 1357
SfaNI GCATC 2 cut(s) 1047, 1188
SfcI CTRYAG 2 cut(s) 1069, 1542
SfoI GGCGCC 1 cut(s) 1398
SfuI TTCGAA 2 cut(s) 790, 1125
SinI GGWCC 1 cut(s) 1115
SmaI CCCGGG 1 cut(s) 1440
SmiMI CAYNNNNRTG 1 cut(s) 1499
SmlI CTYRAG 4 cut(s) 93, 388, 757, 1208
SmoI CTYRAG 4 cut(s) 93, 388, 757, 1208
SsiI CCGC 8 cut(s) 162, 222, 505, 612, 911, 1195, 1380, 1603
SspDI GGCGCC 1 cut(s) 1396
SspMI CTAG 3 cut(s) 479, 488, 1304
StyD4I CCNGG 3 cut(s) 1357, 1437, 1438
StyI CCWWGG 5 cut(s) 247, 962, 1098, 1111, 1674
TaaI ACNGT 5 cut(s) 136, 151, 908, 979, 1006
TaiI ACGT 1 cut(s) 645
TaqI TCGA 3 cut(s) 790, 1125, 1191
TaqII GACCGA 2 cut(s) 566, 1253
TatI WGTACW 2 cut(s) 1212, 1487
TauI GCSGC 2 cut(s) 615, 914
TfiI GAWTC 3 cut(s) 293, 1219, 1260
Tru1I TTAA 3 cut(s) 570, 1011, 1238
Tru9I TTAA 3 cut(s) 570, 1011, 1238
TscAI CASTG 6 cut(s) 622, 982, 1231, 1501, 1546, 1555
TseFI GTSAC 2 cut(s) 1265, 1546
TseI GCWGC 7 cut(s) 102, 155, 672, 782, 1071, 1136, 1298
Tsp45I GTSAC 2 cut(s) 1265, 1546
TspDTI ATGAA 8 cut(s) 53, 274, 285, 325, 1189, 1364, 1421, 1440
TspGWI ACGGA 1 cut(s) 304
TspMI CCCGGG 1 cut(s) 1438
TspRI CASTG 6 cut(s) 622, 982, 1231, 1501, 1546, 1555
VpaK11BI GGWCC 1 cut(s) 1115
XapI RAATTY 4 cut(s) 200, 666, 1466, 1648
XceI RCATGY 1 cut(s) 429
XmaI CCCGGG 1 cut(s) 1438
XmiI GTMKAC 2 cut(s) 1031, 1560
XmnI GAANNNNTTC 1 cut(s) 60
XspI CTAG 3 cut(s) 479, 488, 1304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.