Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000296

Physical Location & Seq

Genomic Coordinates Forward (+)

11284715 .. 11290091

Gene Structure 5377 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1122500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGATGGCTCCCTCTCCCACGATGATCACGAAGCTCATACGTCATCAGATTCCGGTAGAAGACGCGGTGGTTGGATCACCTTCCCCTTCATCACTGGCGCTTTAGCAGGGTTGACACTTGCAGCTGGGGGATGGCTGTCAAATTTGATTGTGTATCTGATTCAAGAATTCAATGTGAAGAGCATTGATGCTGCTCAGATTTCAAACATCGTTGCCGGTTCAAGCAGTTTTTTCCCGGTCATCGGAGCAATCATAGCTGACTCTTTCTTAGGCCCGTTCTCGGTTATCTCCATTTCTTCCTGCATTTCCTTGCTGGGCATAGTTCTTTTAGCGTTAACCGCGACGTTTAATTCGTTGAAGCCTCAAACTTGCATGAACGACGGATCAGAGTTATGCAAACCCACCTCAACAATACAGTATGCAATATTGTACACATCCATAGCTCTAGCAACTATTGGCTTGGGAGGCACACGCTATACCATGGCAACGATGGGAGCAAATCAATTCAAAAACCCTAAAACCCAAGCAAGTTTCTTCAACTGGTACTTCTTCATTCTCTACGCTGCTTCTGTTGTAAGTATTACAGTGATTGTCTACGTTGAGGACAACGTGAGTTGGAAATTAGGGTTTGGCCTTTGTGTCATTGCCAACATACTTGGATTGGTCATTTTTTTATGTGGAACCCATTTCTATCGTTTCGACAAGCCACAAGGGAGTCCATTTGTGGGTTTGGCTCGTGTTGTTGTTGCTTCAACTTGGAAGAGGAATCTTCAGCACTCTTCTGATGAAAGCAAGGATTATTACTATGGGCGAGTGACAGACATGGTCCATGCAACACCTAGCAAAAGCTTCAGGTTCCTCAACCGTGCAGCACAGAAAACTGAAGGAGACATTAAATCAGACGGCTCAATTGCAAAACCATGGAGACTATGCACAGTGCAACAAGTAGAGGATTTCAAGACCCTTATGAGAATTTTGCCATTATGGTCATCAAGTATATTCTTAGGTACCCCAATAGCCGTCCACTCCAGCTTGACCATCTTGCAGGCTCTTACCATGGACCGTCACATAGGACCTCACTTTAAAATACCAGCTGGTTCTATTTTAGTCATTGTCCTAATCTCCACTGCCATCTCTCTCACCCTTATTGATAGGTTCTTATGTCCGGCGTGGCAGAAGATGACCGGTAGGTTTCCGACGTCTCTCCAGCGTATAGGATTAGGCCACGTGTTAAACGTGCTCAGCATGGCTGTTTCGGCATTGGTGGAGTCAAGAAGGCTCACGGCAGTTAAATCCCACCACCTCCAAGACCAACCTGGGGCTATTGTCCCCATGTTAGCCTTGTGGCTTTTCCCACAGTTGGTTTTGGTAGGCATTGGAGAAGCATTTCATTTTCCAGGACAAGTAGCATTGTACTATCAAGAATTTCCAGTGTCACTCCGAAGCACATCTACCGCAATGATCGCTTTGATCGTTGGGATATCGTTTTATTTGGGAACAGGTGTGATTGATTTAGTTCGAAAGGTGACAAGATGGTTGCCGGACAATATAAACAGTGGGAAGCTGGATAATGTGTATTGGATGCTAGTTGTGGTGGGGGTGCTAAATTTTGGTTACTATTTAGTGTGTGCTAAGTTGTACAAGTATCAAAATGTAAAGGGTGCAAATGAAAATCCTGGCCCTGAAGGTGATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009268 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009987 GO:0010447 GO:0010542 GO:0015075 GO:0015103 GO:0015108 GO:0015112 GO:0015291 GO:0015318 GO:0015513 GO:0015562 GO:0015698 GO:0015706 GO:0016020 GO:0022804 GO:0022857 GO:0033554 GO:0034220 GO:0042221 GO:0043207 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0070887 GO:0071214 GO:0071470 GO:0071472 GO:0071705 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0104004 GO:1902074 GO:1902075 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

566

Amino Acids

61.85

Weight (kDa)

9.02

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	93 - 511	1.9e-66	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca	FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica	MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica	Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis	pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis	RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata	RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora	Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii	Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha	Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana	Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1202
Acc65I	GGTACC	1 cut(s)	1007
AccB1I	GGYRCC	1 cut(s)	1007
AccI	GTMKAC	1 cut(s)	594
AccII	CGCG	2 cut(s)	66, 341
AciI	CCGC	3 cut(s)	66, 339, 1455
AclWI	GGATC	2 cut(s)	83, 391
AcsI	RAATTY	5 cut(s)	142, 167, 972, 1424, 1606
AcuI	CTGAAG	3 cut(s)	755, 835, 903
AcvI	CACGTG	1 cut(s)	1228
AcyI	GRCGYC	1 cut(s)	1199
AfaI	GTAC	5 cut(s)	431, 545, 1009, 1415, 1640
AfiI	CCNNNNNNNGG	5 cut(s)	242, 280, 725, 1318, 1360
AflIII	ACRYGT	1 cut(s)	1227
AgeI	ACCGGT	1 cut(s)	1184
AgsI	TTSAA	9 cut(s)	164, 172, 204, 222, 358, 508, 538, 753, 958
AjnI	CCWGG	3 cut(s)	1315, 1396, 1675
AluBI	AGCT	8 cut(s)	35, 125, 257, 443, 849, 1032, 1094, 1564
AluI	AGCT	8 cut(s)	35, 125, 257, 443, 849, 1032, 1094, 1564
Alw21I	GWGCWC	1 cut(s)	1242
Alw26I	GTCTC	3 cut(s)	882, 919, 1206
AlwI	GGATC	2 cut(s)	83, 391
AoxI	GGCC	4 cut(s)	271, 631, 1222, 1678
ApeKI	GCWGC	4 cut(s)	122, 191, 563, 869
ApoI	RAATTY	5 cut(s)	142, 167, 972, 1424, 1606
ArsI	GACNNNNNNTTYG	2 cut(s)	334, 366
AsiGI	ACCGGT	1 cut(s)	1184
Asp700I	GAANNNNTTC	1 cut(s)	1386
Asp718I	GGTACC	1 cut(s)	1007
AspLEI	GCGC	1 cut(s)	101
AspS9I	GGNCC	5 cut(s)	272, 826, 1060, 1073, 1679
AsuC2I	CCSGG	1 cut(s)	236
AsuHPI	GGTGA	3 cut(s)	70, 1132, 1537
AsuII	TTCGAA	1 cut(s)	1519
AvaII	GGWCC	3 cut(s)	826, 1060, 1073
BanI	GGYRCC	1 cut(s)	1007
BarI	GAAGNNNNNNTAC	2 cut(s)	1435, 1467
BauI	CACGAG	1 cut(s)	735
BbrPI	CACGTG	1 cut(s)	1228
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	1 cut(s)	1242
BbvI	GCAGC	4 cut(s)	134, 178, 550, 881
BccI	CCATC	5 cut(s)	126, 484, 1046, 1139, 1527
BceAI	ACGGC	3 cut(s)	919, 1004, 1299
BciT130I	CCWGG	3 cut(s)	1317, 1398, 1677
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	1 cut(s)	236
BcoDI	GTCTC	3 cut(s)	882, 919, 1206
BfaI	CTAG	3 cut(s)	446, 840, 1586
BfoI	RGCGCY	1 cut(s)	102
BisI	GCNGC	4 cut(s)	123, 192, 564, 870
BlpI	GCTNAGC	1 cut(s)	1241
BlsI	GCNGC	4 cut(s)	124, 193, 565, 871
Bme1390I	CCNGG	4 cut(s)	236, 1317, 1398, 1677
Bme18I	GGWCC	3 cut(s)	826, 1060, 1073
BmgT120I	GGNCC	5 cut(s)	272, 826, 1060, 1073, 1679
BmiI	GGNNCC	4 cut(s)	10, 682, 857, 1009
BmrFI	CCNGG	4 cut(s)	236, 1317, 1398, 1677
BmsI	GCATC	2 cut(s)	178, 1572
BpiI	GAAGAC	1 cut(s)	67
BpmI	CTGGAG	2 cut(s)	1012, 1190
Bpu1102I	GCTNAGC	1 cut(s)	1241
Bpu14I	TTCGAA	1 cut(s)	1519
BpuMI	CCSGG	1 cut(s)	236
BsaAI	YACGTR	1 cut(s)	1228
BsaHI	GRCGYC	1 cut(s)	1199
BsaJI	CCNNGG	4 cut(s)	480, 920, 1056, 1316
BsaWI	WCCGGW	2 cut(s)	53, 1184
Bsc4I	CCNNNNNNNGG	5 cut(s)	242, 280, 725, 1318, 1360
Bse118I	RCCGGY	2 cut(s)	215, 1184
Bse1I	ACTGG	3 cut(s)	100, 545, 1430
Bse3DI	GCAATG	2 cut(s)	642, 1464
BseBI	CCWGG	3 cut(s)	1317, 1398, 1677
BseDI	CCNNGG	4 cut(s)	480, 920, 1056, 1316
BseGI	GGATG	4 cut(s)	10, 137, 434, 1587
BseLI	CCNNNNNNNGG	5 cut(s)	242, 280, 725, 1318, 1360
BseMI	GCAATG	2 cut(s)	642, 1464
BseMII	CTCAG	2 cut(s)	209, 1255
BseNI	ACTGG	3 cut(s)	100, 545, 1430
BseXI	GCAGC	4 cut(s)	134, 178, 550, 881
BseYI	CCCAGC	2 cut(s)	125, 313
BsgI	GTGCAG	1 cut(s)	888
Bsh1236I	CGCG	2 cut(s)	66, 341
BshFI	GGCC	4 cut(s)	273, 633, 1224, 1680
BshNI	GGYRCC	1 cut(s)	1007
BshTI	ACCGGT	1 cut(s)	1184
BsiHKAI	GWGCWC	1 cut(s)	1242
BsiSI	CCGG	6 cut(s)	54, 216, 236, 1166, 1185, 1541
BslFI	GGGAC	1 cut(s)	1313
BslI	CCNNNNNNNGG	5 cut(s)	242, 280, 725, 1318, 1360
BsmAI	GTCTC	3 cut(s)	882, 919, 1206
BsmBI	CGTCTC	1 cut(s)	1206
BsmFI	GGGAC	1 cut(s)	1313
BsnI	GGCC	4 cut(s)	273, 633, 1224, 1680
Bsp119I	TTCGAA	1 cut(s)	1519
Bsp1286I	GDGCHC	1 cut(s)	1242
Bsp1407I	TGTACA	2 cut(s)	429, 1638
Bsp143I	GATC	5 cut(s)	25, 75, 383, 1461, 1470
Bsp1720I	GCTNAGC	1 cut(s)	1241
Bsp19I	CCATGG	3 cut(s)	480, 920, 1056
BspACI	CCGC	3 cut(s)	66, 339, 1455
BspANI	GGCC	4 cut(s)	273, 633, 1224, 1680
BspCNI	CTCAG	2 cut(s)	208, 1254
BspFNI	CGCG	2 cut(s)	66, 341
BspLI	GGNNCC	4 cut(s)	10, 682, 857, 1009
BspPI	GGATC	2 cut(s)	83, 391
BspQI	GCTCTTC	1 cut(s)	173
BspT104I	TTCGAA	1 cut(s)	1519
BspT107I	GGYRCC	1 cut(s)	1007
BsrDI	GCAATG	2 cut(s)	642, 1464
BsrFI	RCCGGY	2 cut(s)	215, 1184
BsrGI	TGTACA	2 cut(s)	429, 1638
BsrI	ACTGG	3 cut(s)	100, 545, 1430
BssAI	RCCGGY	2 cut(s)	215, 1184
BssECI	CCNNGG	4 cut(s)	480, 920, 1056, 1316
BssMI	GATC	5 cut(s)	25, 75, 383, 1461, 1470
BssNI	GRCGYC	1 cut(s)	1199
BssSI	CACGAG	1 cut(s)	735
BssT1I	CCWWGG	3 cut(s)	480, 920, 1056
Bst2BI	CACGAG	1 cut(s)	735
Bst2UI	CCWGG	3 cut(s)	1317, 1398, 1677
Bst4CI	ACNGT	7 cut(s)	417, 586, 866, 937, 1064, 1359, 1556
Bst6I	CTCTTC	3 cut(s)	173, 755, 784
BstACI	GRCGYC	1 cut(s)	1199
BstAUI	TGTACA	2 cut(s)	429, 1638
BstBAI	YACGTR	1 cut(s)	1228
BstBI	TTCGAA	1 cut(s)	1519
BstC8I	GCNNGC	1 cut(s)	1047
BstDEI	CTNAG	5 cut(s)	195, 268, 1003, 1241, 1632
BstDSI	CCRYGG	3 cut(s)	480, 920, 1056
BstF5I	GGATG	4 cut(s)	10, 137, 434, 1587
BstFNI	CGCG	2 cut(s)	66, 341
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	1 cut(s)	101
BstKTI	GATC	5 cut(s)	28, 78, 386, 1464, 1473
BstMAI	GTCTC	3 cut(s)	882, 919, 1206
BstMBI	GATC	5 cut(s)	25, 75, 383, 1461, 1470
BstMWI	GCNNNNNNNGC	5 cut(s)	254, 338, 465, 1256, 1463
BstNI	CCWGG	3 cut(s)	1317, 1398, 1677
BstSCI	CCNGG	4 cut(s)	234, 1315, 1396, 1675
BstUI	CGCG	2 cut(s)	66, 341
BstV1I	GCAGC	4 cut(s)	134, 178, 550, 881
BstV2I	GAAGAC	1 cut(s)	67
BsuRI	GGCC	4 cut(s)	273, 633, 1224, 1680
BtgI	CCRYGG	3 cut(s)	480, 920, 1056
BtsCI	GGATG	4 cut(s)	10, 137, 434, 1587
BtsI	GCAGTG	1 cut(s)	1125
BtsIMutI	CAGTG	6 cut(s)	93, 591, 942, 1125, 1437, 1561
Cac8I	GCNNGC	1 cut(s)	1047
CfoI	GCGC	1 cut(s)	101
Cfr10I	RCCGGY	2 cut(s)	215, 1184
Cfr13I	GGNCC	5 cut(s)	272, 826, 1060, 1073, 1679
CseI	GACGC	1 cut(s)	72
Csp6I	GTAC	5 cut(s)	430, 544, 1008, 1414, 1639
CspAI	ACCGGT	1 cut(s)	1184
CviAII	CATG	8 cut(s)	373, 481, 823, 830, 921, 1057, 1246, 1333
CviQI	GTAC	5 cut(s)	430, 544, 1008, 1414, 1639
DdeI	CTNAG	5 cut(s)	195, 268, 1003, 1241, 1632
DpnI	GATC	5 cut(s)	27, 77, 385, 1463, 1472
DpnII	GATC	5 cut(s)	25, 75, 383, 1461, 1470
DraI	TTTAAA	1 cut(s)	1084
Eam1104I	CTCTTC	3 cut(s)	173, 755, 784
EarI	CTCTTC	3 cut(s)	173, 755, 784
Eco130I	CCWWGG	3 cut(s)	480, 920, 1056
Eco32I	GATATC	1 cut(s)	1482
Eco47I	GGWCC	3 cut(s)	826, 1060, 1073
Eco57I	CTGAAG	3 cut(s)	755, 835, 903
Eco72I	CACGTG	1 cut(s)	1228
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	3 cut(s)	1315, 1396, 1675
EcoRV	GATATC	1 cut(s)	1482
EcoT14I	CCWWGG	3 cut(s)	480, 920, 1056
ErhI	CCWWGG	3 cut(s)	480, 920, 1056
Esp3I	CGTCTC	1 cut(s)	1206
FaeI	CATG	8 cut(s)	376, 484, 826, 833, 924, 1060, 1249, 1336
FaqI	GGGAC	1 cut(s)	1313
FatI	CATG	8 cut(s)	372, 480, 822, 829, 920, 1056, 1245, 1332
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	1 cut(s)	594
Fnu4HI	GCNGC	4 cut(s)	123, 192, 564, 870
FokI	GGATG	4 cut(s)	17, 144, 421, 1594
Fsp4HI	GCNGC	4 cut(s)	123, 192, 564, 870
FspBI	CTAG	3 cut(s)	446, 840, 1586
GlaI	GCGC	1 cut(s)	100
GluI	GCNGC	4 cut(s)	123, 192, 564, 870
GsaI	CCCAGC	2 cut(s)	129, 317
GsuI	CTGGAG	2 cut(s)	1012, 1190
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	4 cut(s)	273, 633, 1224, 1680
HapII	CCGG	6 cut(s)	54, 216, 236, 1166, 1185, 1541
HgaI	GACGC	1 cut(s)	72
HhaI	GCGC	1 cut(s)	101
Hin1I	GRCGYC	1 cut(s)	1199
Hin1II	CATG	8 cut(s)	376, 484, 826, 833, 924, 1060, 1249, 1336
Hin6I	GCGC	1 cut(s)	99
HinP1I	GCGC	1 cut(s)	99
HincII	GTYRAC	2 cut(s)	114, 336
HindII	GTYRAC	2 cut(s)	114, 336
HindIII	AAGCTT	1 cut(s)	847
HinfI	GANTC	6 cut(s)	50, 160, 260, 715, 766, 1268
HpaI	GTTAAC	1 cut(s)	336
HpaII	CCGG	6 cut(s)	54, 216, 236, 1166, 1185, 1541
HphI	GGTGA	3 cut(s)	70, 1132, 1537
Hpy166II	GTNNAC	5 cut(s)	114, 336, 432, 595, 1024
Hpy188I	TCNGA	9 cut(s)	49, 159, 198, 245, 388, 784, 901, 1197, 1442
Hpy188III	TCNNGA	5 cut(s)	29, 164, 958, 1272, 1421
Hpy8I	GTNNAC	5 cut(s)	114, 336, 432, 595, 1024
Hpy99I	CGWCG	3 cut(s)	346, 383, 1201
HpyAV	CCTTC	5 cut(s)	91, 97, 878, 1269, 1679
HpyCH4III	ACNGT	7 cut(s)	417, 586, 866, 937, 1064, 1359, 1556
HpyCH4IV	ACGT	7 cut(s)	41, 344, 597, 609, 1199, 1227, 1236
HpyF10VI	GCNNNNNNNGC	5 cut(s)	254, 338, 465, 1256, 1463
HpyF3I	CTNAG	5 cut(s)	195, 268, 1003, 1241, 1632
HpySE526I	ACGT	7 cut(s)	41, 344, 597, 609, 1199, 1227, 1236
Hsp92I	GRCGYC	1 cut(s)	1199
Hsp92II	CATG	8 cut(s)	376, 484, 826, 833, 924, 1060, 1249, 1336
HspAI	GCGC	1 cut(s)	99
KpnI	GGTACC	1 cut(s)	1011
Ksp22I	TGATCA	1 cut(s)	25
KspAI	GTTAAC	1 cut(s)	336
Kzo9I	GATC	5 cut(s)	25, 75, 383, 1461, 1470
LguI	GCTCTTC	1 cut(s)	173
LmnI	GCTCC	3 cut(s)	14, 245, 494
Lsp1109I	GCAGC	4 cut(s)	134, 178, 550, 881
LweI	GCATC	2 cut(s)	178, 1572
MaeI	CTAG	3 cut(s)	446, 840, 1586
MaeII	ACGT	7 cut(s)	41, 344, 597, 609, 1199, 1227, 1236
MaeIII	GTNAC	5 cut(s)	814, 1064, 1434, 1525, 1613
MalI	GATC	5 cut(s)	27, 77, 385, 1463, 1472
MboI	GATC	5 cut(s)	25, 75, 383, 1461, 1470
MboII	GAAGA	9 cut(s)	72, 190, 288, 526, 541, 761, 771, 772, 1189
MfeI	CAATTG	1 cut(s)	909
MhlI	GDGCHC	1 cut(s)	1242
MluCI	AATT	9 cut(s)	142, 167, 349, 503, 620, 909, 972, 1424, 1606
MlyI	GAGTC	3 cut(s)	254, 724, 1277
MmeI	TCCRAC	3 cut(s)	53, 596, 1220
MroXI	GAANNNNTTC	1 cut(s)	1386
MseI	TTAA	6 cut(s)	335, 348, 894, 1083, 1232, 1290
MspA1I	CMGCKG	2 cut(s)	125, 1094
MspI	CCGG	6 cut(s)	54, 216, 236, 1166, 1185, 1541
MspR9I	CCNGG	4 cut(s)	236, 1317, 1398, 1677
MunI	CAATTG	1 cut(s)	909
MvaI	CCWGG	3 cut(s)	1317, 1398, 1677
MvnI	CGCG	2 cut(s)	66, 341
MwoI	GCNNNNNNNGC	5 cut(s)	254, 338, 465, 1256, 1463
NciI	CCSGG	1 cut(s)	236
NcoI	CCATGG	3 cut(s)	480, 920, 1056
NdeII	GATC	5 cut(s)	25, 75, 383, 1461, 1470
NlaIII	CATG	8 cut(s)	376, 484, 826, 833, 924, 1060, 1249, 1336
NlaIV	GGNNCC	4 cut(s)	10, 682, 857, 1009
NmuCI	GTSAC	4 cut(s)	814, 1064, 1434, 1525
NspV	TTCGAA	1 cut(s)	1519
PciSI	GCTCTTC	1 cut(s)	173
PcsI	WCGNNNNNNNCGW	4 cut(s)	27, 350, 1233, 1470
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	3 cut(s)	50, 160, 766
PflFI	GACNNNGTC	1 cut(s)	824
PfoI	TCCNGGA	1 cut(s)	1396
PinAI	ACCGGT	1 cut(s)	1184
PkrI	GCNGC	4 cut(s)	124, 193, 565, 871
PleI	GAGTC	3 cut(s)	254, 723, 1276
PmaCI	CACGTG	1 cut(s)	1228
PmlI	CACGTG	1 cut(s)	1228
PpsI	GAGTC	3 cut(s)	254, 723, 1276
Ppu21I	YACGTR	1 cut(s)	1228
PpuMI	RGGWCCY	1 cut(s)	1073
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	3 cut(s)	1315, 1396, 1675
PspCI	CACGTG	1 cut(s)	1228
PspFI	CCCAGC	2 cut(s)	125, 313
PspGI	CCWGG	3 cut(s)	1315, 1396, 1675
PspN4I	GGNNCC	4 cut(s)	10, 682, 857, 1009
PspPI	GGNCC	5 cut(s)	272, 826, 1060, 1073, 1679
PspPPI	RGGWCCY	1 cut(s)	1073
PsyI	GACNNNGTC	1 cut(s)	824
PvuII	CAGCTG	2 cut(s)	125, 1094
RsaI	GTAC	5 cut(s)	431, 545, 1009, 1415, 1640
RsaNI	GTAC	5 cut(s)	430, 544, 1008, 1414, 1639
SapI	GCTCTTC	1 cut(s)	173
SaqAI	TTAA	6 cut(s)	335, 348, 894, 1083, 1232, 1290
SatI	GCNGC	4 cut(s)	123, 192, 564, 870
Sau3AI	GATC	5 cut(s)	25, 75, 383, 1461, 1470
Sau96I	GGNCC	5 cut(s)	272, 826, 1060, 1073, 1679
SchI	GAGTC	3 cut(s)	254, 724, 1277
ScrFI	CCNGG	4 cut(s)	236, 1317, 1398, 1677
SduI	GDGCHC	1 cut(s)	1242
SfaNI	GCATC	2 cut(s)	178, 1572
SfuI	TTCGAA	1 cut(s)	1519
SinI	GGWCC	3 cut(s)	826, 1060, 1073
Sse9I	AATT	9 cut(s)	142, 167, 349, 503, 620, 909, 972, 1424, 1606
SsiI	CCGC	3 cut(s)	66, 339, 1455
SspI	AATATT	1 cut(s)	426
SspMI	CTAG	3 cut(s)	446, 840, 1586
StyD4I	CCNGG	4 cut(s)	234, 1315, 1396, 1675
StyI	CCWWGG	3 cut(s)	480, 920, 1056
TaaI	ACNGT	7 cut(s)	417, 586, 866, 937, 1064, 1359, 1556
TaiI	ACGT	7 cut(s)	44, 347, 600, 612, 1202, 1230, 1239
TaqI	TCGA	2 cut(s)	699, 1519
TasI	AATT	9 cut(s)	142, 167, 349, 503, 620, 909, 972, 1424, 1606
TatI	WGTACW	3 cut(s)	429, 1413, 1638
TfiI	GAWTC	3 cut(s)	50, 160, 766
Tru1I	TTAA	6 cut(s)	335, 348, 894, 1083, 1232, 1290
Tru9I	TTAA	6 cut(s)	335, 348, 894, 1083, 1232, 1290
TscAI	CASTG	6 cut(s)	100, 591, 942, 1132, 1437, 1561
TseFI	GTSAC	4 cut(s)	814, 1064, 1434, 1525
TseI	GCWGC	4 cut(s)	122, 191, 563, 869
Tsp45I	GTSAC	4 cut(s)	814, 1064, 1434, 1525
TspDTI	ATGAA	6 cut(s)	79, 389, 541, 801, 1379, 1683
TspGWI	ACGGA	1 cut(s)	396
TspRI	CASTG	6 cut(s)	100, 591, 942, 1132, 1437, 1561
Tth111I	GACNNNGTC	1 cut(s)	824
VpaK11BI	GGWCC	3 cut(s)	826, 1060, 1073
XapI	RAATTY	5 cut(s)	142, 167, 972, 1424, 1606
XcmI	CCANNNNNNNNNTGG	2 cut(s)	487, 1313
XmiI	GTMKAC	1 cut(s)	594
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	3 cut(s)	446, 840, 1586
ZraI	GACGTC	1 cut(s)	1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.