Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000296

Physical Location & Seq

Genomic Coordinates Reverse (-)

42160991 .. 42163195

Gene Structure 2205 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG285500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGAAGTTGAAGGGAAGCTCTCTTCCCAGTCCACATCCAAAGAAGGAGGAGAAGTTCATAGGGTTTGCGATGATCATGAAGATTCAAAAGGAGGAGGCTGGACAACATTTCCCTTTGTTACTGCAACTGTGTTGGGTCTCTCAGTAGCAGCCGGCGGGTGGGCATCGAATTTGATAGTGTTTCTGATAACAAAATTCAATGTGAAGACCATAACGGCTACACAGATCAATAACATCATCCTTGGTACCAACAATCTCTTCCCCATCGCCGGAGCCTTCATCGCTGATTCCTTTTTCACCTCCTTCTCCGTTGTCGGCACCTTTTCCTTCATTTCTTTACTGGGTATGATCATGTTGACCCTAATAGCAACTATCCACTCATTGAGGCCCTCACCATGTTCAATTGGCTCACTTATTACATGTCAAGCTCCATCAAAGTTTCAATACTCAGTCCTATATGTAGCATTATCACTAGCTTCTCTAGGACTTGGAGGCACTCGCTTCACAATTGCAACCATGGGAGCAGACCAATTCAATAATCCAAACGATCAAGGGGTTTTCTTCAATTGGTATTTTCTGGCTTTGTATGTGGCCAATGTCTTCAGCTTCACAGCCATCATATATATTCAGGACAACGTGGGATGGGGATTAGGGTTCGGAATATGTTGCATTGCAAATGGTATTGGATTGGGGGTGTTTTTGTTGGGGAAACGACTTTATAAGCAAGTTAAACCAAAGGGTAGCCCATTCTTAAGCATAGCAAGAGTACTGGTTGCAGCAATTCGGAAGAGGAAGATTTCATCAGAAGCTTCTAGAGATAATGATTATTATTATGGAGCAGGTGTTTTGGCCGACAGTGCTCCACCAACTAAAAGTTTCAGATTCCTGAACTGTGCAGCCTTTAAAATTGAAGAAGACAAACAATTTGAAGGCTCGTATGGAAACCCATGGAGGCTATGCACTGTGAAAGAAGTGGAAGACCTCAAAACCCTAATTAAGATCATGCCACTGTGGTCTACTGGCATCTTCCTAAGCACACCAATAGGCATATTCAGCAGCCTTACTATACTCCAAGCCCTAACCATGGATAGACACCTTGGTCCACACTTCAAAATCCCTGCTGCTTCATTCCTAGTGTTTAACCTCTTAGCCACCGCCATCTCCATCTTCATAATTGACCGCTGCATACTCCTCAAGTACAAGAACCTCACTGGACGAACTCTAACACCGATCCAGCGAATAGGGATCGGACACATCATAAACATTATTTCCCTAATTGGGTCTGCCTTAATCGAAAGAAGACGACTTGGAGTGGTAAGAGCACATAGCCTCACGAACCAACCTGGTTCAGAGGTGCCCATGTCCGCCCTTTGGCTTGTGGCACCACTGTCGGTTATGGGAATCGCTGAGGCATTTCATTTCCCTGGACAAGTTTCATTGTGCTATCAAGAATTTCCAAAATCATTGAGAAGTACCTCCACTGCTATGATCTCATTGTTGATTGGAATCGGGTATTATCTTAGCACTGCAGTCACTGATTTGGTAGACAAGACCACAAAGTGGTTACCAGATGATATAAATCAAGGGAGGTTGGATAATATGTTTTGGATGTTGGTAGTGATTGGGGTGGTGAATTTTGGTTACTTCATAACTTGTGCTAAGTTCTTTGTGTATCAAAACCAAAATGTAGGGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0008150 GO:0008509 GO:0009987 GO:0015075 GO:0015103 GO:0015108 GO:0015318 GO:0015698 GO:0022857 GO:0034220 GO:0042221 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0070887 GO:0098656 GO:0098660 GO:0098661 GO:1902074 GO:1902075 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

565

Amino Acids

61.82

Weight (kDa)

9.15

Isoelectric Point (pI)

29.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	81 - 505	9.7e-10	Major Facilitator Superfamily
PTR2	PF00854	104 - 520	8e-67	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca	FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica	MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica	Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis	pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis	RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata	RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora	Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii	Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha	Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana	Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	720
AarI	CACCTGC	1 cut(s)	830
AasI	GACNNNNNNGTC	1 cut(s)	1098
Acc36I	ACCTGC	1 cut(s)	830
Acc65I	GGTACC	1 cut(s)	245
AccB1I	GGYRCC	4 cut(s)	245, 317, 1354, 1381
AccB7I	CCANNNNNTGG	1 cut(s)	1560
AccI	GTMKAC	2 cut(s)	1016, 1545
AciI	CCGC	4 cut(s)	156, 1155, 1180, 1365
AclWI	GGATC	2 cut(s)	1225, 1253
AcoI	YGGCCR	2 cut(s)	591, 849
AcsI	RAATTY	4 cut(s)	169, 194, 1451, 1633
AcuI	CTGAAG	1 cut(s)	586
AdeI	CACNNNGTG	1 cut(s)	1560
AfaI	GTAC	4 cut(s)	247, 768, 1199, 1474
AfiI	CCNNNNNNNGG	6 cut(s)	159, 269, 1084, 1278, 1371, 1560
AflII	CTTAAG	1 cut(s)	751
AflIII	ACRYGT	1 cut(s)	419
AjnI	CCWGG	2 cut(s)	1342, 1423
AjuI	GAANNNNNNNTTGG	2 cut(s)	242, 274
AloI	GAACNNNNNNTCC	2 cut(s)	39, 71
AluBI	AGCT	5 cut(s)	19, 428, 476, 606, 809
AluI	AGCT	5 cut(s)	19, 428, 476, 606, 809
Alw21I	GWGCWC	2 cut(s)	862, 1324
Alw26I	GTCTC	1 cut(s)	143
AlwI	GGATC	2 cut(s)	1225, 1253
AlwNI	CAGNNNCTG	1 cut(s)	1535
AoxI	GGCC	3 cut(s)	386, 591, 849
ApeKI	GCWGC	6 cut(s)	149, 776, 896, 1056, 1121, 1182
ApoI	RAATTY	4 cut(s)	169, 194, 1451, 1633
ArsI	GACNNNNNNTTYG	2 cut(s)	908, 940
Asp718I	GGTACC	1 cut(s)	245
AspS9I	GGNCC	2 cut(s)	387, 1100
AsuHPI	GGTGA	3 cut(s)	289, 384, 1642
AvaII	GGWCC	1 cut(s)	1100
BaeGI	GKGCMC	1 cut(s)	1359
BalI	TGGCCA	1 cut(s)	593
BanI	GGYRCC	4 cut(s)	245, 317, 1354, 1381
BbsI	GAAGAC	5 cut(s)	212, 592, 921, 984, 1306
Bbv12I	GWGCWC	2 cut(s)	862, 1324
BbvCI	CCTCAGC	1 cut(s)	1407
BbvI	GCAGC	6 cut(s)	161, 788, 908, 1068, 1108, 1169
BccI	CCATC	6 cut(s)	272, 439, 623, 636, 1166, 1172
BceAI	ACGGC	1 cut(s)	231
BcgI	CGANNNNNNTGC	2 cut(s)	1371, 1405
BciT130I	CCWGG	2 cut(s)	1344, 1425
BclI	TGATCA	2 cut(s)	73, 348
BcoDI	GTCTC	1 cut(s)	143
BfaI	CTAG	4 cut(s)	473, 482, 813, 1133
BfmI	CTRYAG	1 cut(s)	1527
BfrI	CTTAAG	1 cut(s)	751
BfuAI	ACCTGC	1 cut(s)	830
BisI	GCNGC	6 cut(s)	150, 777, 897, 1057, 1122, 1183
BlsI	GCNGC	6 cut(s)	151, 778, 898, 1058, 1123, 1184
BmcAI	AGTACT	1 cut(s)	768
Bme1390I	CCNGG	2 cut(s)	1344, 1425
Bme18I	GGWCC	1 cut(s)	1100
BmgT120I	GGNCC	2 cut(s)	387, 1100
BmiI	GGNNCC	5 cut(s)	247, 274, 319, 1356, 1383
BmrFI	CCNGG	2 cut(s)	1344, 1425
BmrI	ACTGGG	2 cut(s)	22, 350
BmsI	GCATC	2 cut(s)	173, 1032
BmuI	ACTGGG	2 cut(s)	22, 350
BpiI	GAAGAC	5 cut(s)	212, 592, 921, 984, 1306
Bpu10I	CCTNAGC	2 cut(s)	1031, 1407
BpuEI	CTTGAG	1 cut(s)	1178
BsaBI	GATNNNNATC	2 cut(s)	1505, 1578
BsaI	GGTCTC	1 cut(s)	143
BsaJI	CCNNGG	6 cut(s)	241, 516, 947, 1083, 1096, 1423
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 828, 858
Bsc4I	CCNNNNNNNGG	6 cut(s)	159, 269, 1084, 1278, 1371, 1560
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	5 cut(s)	28, 345, 774, 1024, 1216
Bse3DI	GCAATG	1 cut(s)	669
Bse8I	GATNNNNATC	2 cut(s)	1505, 1578
BseBI	CCWGG	2 cut(s)	1344, 1425
BseDI	CCNNGG	6 cut(s)	241, 516, 947, 1083, 1096, 1423
BseGI	GGATG	4 cut(s)	35, 237, 647, 1614
BseJI	GATNNNNATC	2 cut(s)	1505, 1578
BseLI	CCNNNNNNNGG	6 cut(s)	159, 269, 1084, 1278, 1371, 1560
BseMI	GCAATG	1 cut(s)	669
BseMII	CTCAG	3 cut(s)	156, 462, 1398
BseNI	ACTGG	5 cut(s)	28, 345, 774, 1024, 1216
BseRI	GAGGAG	3 cut(s)	63, 108, 1181
BseSI	GKGCMC	1 cut(s)	1359
BseXI	GCAGC	6 cut(s)	161, 788, 908, 1068, 1108, 1169
BsgI	GTGCAG	1 cut(s)	915
BshFI	GGCC	3 cut(s)	388, 593, 851
BshNI	GGYRCC	4 cut(s)	245, 317, 1354, 1381
BsiHKAI	GWGCWC	2 cut(s)	862, 1324
BsiSI	CCGG	2 cut(s)	153, 270
BslI	CCNNNNNNNGG	6 cut(s)	159, 269, 1084, 1278, 1371, 1560
BsmAI	GTCTC	1 cut(s)	143
BsnI	GGCC	3 cut(s)	388, 593, 851
Bso31I	GGTCTC	1 cut(s)	143
Bsp1286I	GDGCHC	3 cut(s)	862, 1324, 1359
Bsp143I	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
Bsp19I	CCATGG	3 cut(s)	516, 947, 1083
BspACI	CCGC	4 cut(s)	156, 1155, 1180, 1365
BspANI	GGCC	3 cut(s)	388, 593, 851
BspCNI	CTCAG	3 cut(s)	155, 461, 1399
BspHI	TCATGA	1 cut(s)	76
BspLI	GGNNCC	5 cut(s)	247, 274, 319, 1356, 1383
BspMAI	CTGCAG	1 cut(s)	1531
BspMI	ACCTGC	1 cut(s)	830
BspPI	GGATC	2 cut(s)	1225, 1253
BspT107I	GGYRCC	4 cut(s)	245, 317, 1354, 1381
BspTI	CTTAAG	1 cut(s)	751
BspTNI	GGTCTC	1 cut(s)	143
BsrDI	GCAATG	1 cut(s)	669
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	5 cut(s)	28, 345, 774, 1024, 1216
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	6 cut(s)	241, 516, 947, 1083, 1096, 1423
BssMI	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
BssT1I	CCWWGG	5 cut(s)	241, 516, 947, 1083, 1096
Bst2UI	CCWGG	2 cut(s)	1344, 1425
Bst4CI	ACNGT	6 cut(s)	130, 857, 893, 964, 1011, 1389
Bst6I	CTCTTC	3 cut(s)	28, 263, 782
BstAFI	CTTAAG	1 cut(s)	751
BstC8I	GCNNGC	1 cut(s)	154
BstDEI	CTNAG	7 cut(s)	142, 448, 1031, 1147, 1407, 1520, 1659
BstDSI	CCRYGG	3 cut(s)	516, 947, 1083
BstEII	GGTNACC	1 cut(s)	1563
BstF5I	GGATG	4 cut(s)	35, 237, 647, 1614
BstKTI	GATC	8 cut(s)	76, 228, 351, 550, 1002, 1233, 1248, 1491
BstMAI	GTCTC	1 cut(s)	143
BstMBI	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
BstMWI	GCNNNNNNNGC	3 cut(s)	281, 857, 1053
BstNI	CCWGG	2 cut(s)	1344, 1425
BstNSI	RCATGY	1 cut(s)	423
BstPI	GGTNACC	1 cut(s)	1563
BstSCI	CCNGG	2 cut(s)	1342, 1423
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	1 cut(s)	1359
BstV1I	GCAGC	6 cut(s)	161, 788, 908, 1068, 1108, 1169
BstV2I	GAAGAC	5 cut(s)	212, 592, 921, 984, 1306
BsuRI	GGCC	3 cut(s)	388, 593, 851
BtgI	CCRYGG	3 cut(s)	516, 947, 1083
BtgZI	GCGATG	3 cut(s)	84, 250, 265
BtsCI	GGATG	4 cut(s)	35, 237, 647, 1614
BtsI	GCAGTG	2 cut(s)	1479, 1524
BtsIMutI	CAGTG	8 cut(s)	862, 960, 1007, 1209, 1385, 1479, 1524, 1533
BveI	ACCTGC	1 cut(s)	830
Cac8I	GCNNGC	1 cut(s)	154
CaiI	CAGNNNCTG	1 cut(s)	1535
CciI	TCATGA	1 cut(s)	76
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	2 cut(s)	387, 1100
CsiI	ACCWGGT	1 cut(s)	1342
Csp6I	GTAC	4 cut(s)	246, 767, 1198, 1473
CviAII	CATG	9 cut(s)	77, 352, 396, 420, 517, 948, 1003, 1084, 1360
CviQI	GTAC	4 cut(s)	246, 767, 1198, 1473
DdeI	CTNAG	7 cut(s)	142, 448, 1031, 1147, 1407, 1520, 1659
DpnI	GATC	8 cut(s)	75, 227, 350, 549, 1001, 1232, 1247, 1490
DpnII	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
DraI	TTTAAA	1 cut(s)	904
DraIII	CACNNNGTG	1 cut(s)	1560
DrdI	GACNNNNNNGTC	1 cut(s)	1098
DseDI	GACNNNNNNGTC	1 cut(s)	1098
EaeI	YGGCCR	2 cut(s)	591, 849
Eam1104I	CTCTTC	3 cut(s)	28, 263, 782
EarI	CTCTTC	3 cut(s)	28, 263, 782
EciI	GGCGGA	1 cut(s)	1354
Eco130I	CCWWGG	5 cut(s)	241, 516, 947, 1083, 1096
Eco31I	GGTCTC	1 cut(s)	143
Eco47I	GGWCC	1 cut(s)	1100
Eco57I	CTGAAG	1 cut(s)	586
Eco91I	GGTNACC	1 cut(s)	1563
EcoO109I	RGGNCCY	1 cut(s)	387
EcoO65I	GGTNACC	1 cut(s)	1563
EcoRII	CCWGG	2 cut(s)	1342, 1423
EcoT14I	CCWWGG	5 cut(s)	241, 516, 947, 1083, 1096
ErhI	CCWWGG	5 cut(s)	241, 516, 947, 1083, 1096
FaeI	CATG	9 cut(s)	80, 355, 399, 423, 520, 951, 1006, 1087, 1363
FatI	CATG	9 cut(s)	76, 351, 395, 419, 516, 947, 1002, 1083, 1359
FauI	CCCGC	1 cut(s)	149
FbaI	TGATCA	2 cut(s)	73, 348
FblI	GTMKAC	2 cut(s)	1016, 1545
Fnu4HI	GCNGC	6 cut(s)	150, 777, 897, 1057, 1122, 1183
FokI	GGATG	4 cut(s)	22, 224, 654, 1621
Fsp4HI	GCNGC	6 cut(s)	150, 777, 897, 1057, 1122, 1183
FspBI	CTAG	4 cut(s)	473, 482, 813, 1133
GluI	GCNGC	6 cut(s)	150, 777, 897, 1057, 1122, 1183
HaeIII	GGCC	3 cut(s)	388, 593, 851
HapII	CCGG	2 cut(s)	153, 270
Hin1II	CATG	9 cut(s)	80, 355, 399, 423, 520, 951, 1006, 1087, 1363
HincII	GTYRAC	1 cut(s)	357
HindII	GTYRAC	1 cut(s)	357
HindIII	AAGCTT	1 cut(s)	807
HinfI	GANTC	5 cut(s)	83, 287, 882, 1401, 1506
HpaII	CCGG	2 cut(s)	153, 270
HphI	GGTGA	3 cut(s)	289, 384, 1642
Hpy166II	GTNNAC	5 cut(s)	33, 357, 1017, 1103, 1546
Hpy188I	TCNGA	7 cut(s)	186, 659, 786, 805, 881, 1250, 1351
Hpy188III	TCNNGA	6 cut(s)	77, 629, 813, 886, 1333, 1448
Hpy8I	GTNNAC	5 cut(s)	33, 357, 1017, 1103, 1546
HpyAV	CCTTC	6 cut(s)	5, 38, 286, 313, 337, 923
HpyCH4III	ACNGT	6 cut(s)	130, 857, 893, 964, 1011, 1389
HpyCH4IV	ACGT	1 cut(s)	636
HpyCH4V	TGCA	9 cut(s)	125, 512, 669, 674, 776, 896, 960, 1185, 1529
HpyF10VI	GCNNNNNNNGC	3 cut(s)	281, 857, 1053
HpyF3I	CTNAG	7 cut(s)	142, 448, 1031, 1147, 1407, 1520, 1659
HpySE526I	ACGT	1 cut(s)	636
Hsp92II	CATG	9 cut(s)	80, 355, 399, 423, 520, 951, 1006, 1087, 1363
KpnI	GGTACC	1 cut(s)	249
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Ksp22I	TGATCA	2 cut(s)	73, 348
Kzo9I	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
LmnI	GCTCC	5 cut(s)	272, 433, 521, 836, 865
Lsp1109I	GCAGC	6 cut(s)	161, 788, 908, 1068, 1108, 1169
LweI	GCATC	2 cut(s)	173, 1032
MabI	ACCWGGT	1 cut(s)	1342
MaeI	CTAG	4 cut(s)	473, 482, 813, 1133
MaeII	ACGT	1 cut(s)	636
MaeIII	GTNAC	4 cut(s)	118, 1531, 1563, 1640
MalI	GATC	8 cut(s)	75, 227, 350, 549, 1001, 1232, 1247, 1490
MboI	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
MfeI	CAATTG	3 cut(s)	402, 507, 565
MhlI	GDGCHC	3 cut(s)	862, 1324, 1359
MlsI	TGGCCA	1 cut(s)	593
MluNI	TGGCCA	1 cut(s)	593
MmeI	TCCRAC	1 cut(s)	1572
Mox20I	TGGCCA	1 cut(s)	593
MroNI	GCCGGC	1 cut(s)	152
MscI	TGGCCA	1 cut(s)	593
MseI	TTAA	6 cut(s)	729, 752, 903, 996, 1140, 1289
MslI	CAYNNNNRTG	1 cut(s)	1484
Msp20I	TGGCCA	1 cut(s)	593
MspA1I	CMGCKG	1 cut(s)	1182
MspCI	CTTAAG	1 cut(s)	751
MspI	CCGG	2 cut(s)	153, 270
MspR9I	CCNGG	2 cut(s)	1344, 1425
MunI	CAATTG	3 cut(s)	402, 507, 565
MvaI	CCWGG	2 cut(s)	1344, 1425
MwoI	GCNNNNNNNGC	3 cut(s)	281, 857, 1053
NaeI	GCCGGC	1 cut(s)	154
NcoI	CCATGG	3 cut(s)	516, 947, 1083
NdeII	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
NgoMIV	GCCGGC	1 cut(s)	152
NlaIII	CATG	9 cut(s)	80, 355, 399, 423, 520, 951, 1006, 1087, 1363
NlaIV	GGNNCC	5 cut(s)	247, 274, 319, 1356, 1383
NmuCI	GTSAC	1 cut(s)	1531
NspI	RCATGY	1 cut(s)	423
PagI	TCATGA	1 cut(s)	76
PaqCI	CACCTGC	1 cut(s)	830
PciI	ACATGT	1 cut(s)	419
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	5 cut(s)	83, 287, 882, 1401, 1506
PflMI	CCANNNNNTGG	1 cut(s)	1560
PkrI	GCNGC	6 cut(s)	151, 778, 898, 1058, 1123, 1184
PscI	ACATGT	1 cut(s)	419
PsiI	TTATAA	1 cut(s)	720
Psp6I	CCWGG	2 cut(s)	1342, 1423
PspEI	GGTNACC	1 cut(s)	1563
PspGI	CCWGG	2 cut(s)	1342, 1423
PspN4I	GGNNCC	5 cut(s)	247, 274, 319, 1356, 1383
PspPI	GGNCC	2 cut(s)	387, 1100
PstI	CTGCAG	1 cut(s)	1531
PstNI	CAGNNNCTG	1 cut(s)	1535
RsaI	GTAC	4 cut(s)	247, 768, 1199, 1474
RsaNI	GTAC	4 cut(s)	246, 767, 1198, 1473
RseI	CAYNNNNRTG	1 cut(s)	1484
SaqAI	TTAA	6 cut(s)	729, 752, 903, 996, 1140, 1289
SatI	GCNGC	6 cut(s)	150, 777, 897, 1057, 1122, 1183
Sau3AI	GATC	8 cut(s)	73, 225, 348, 547, 999, 1230, 1245, 1488
Sau96I	GGNCC	2 cut(s)	387, 1100
ScaI	AGTACT	1 cut(s)	768
ScrFI	CCNGG	2 cut(s)	1344, 1425
SduI	GDGCHC	3 cut(s)	862, 1324, 1359
SexAI	ACCWGGT	1 cut(s)	1342
SfaNI	GCATC	2 cut(s)	173, 1032
SfcI	CTRYAG	1 cut(s)	1527
SinI	GGWCC	1 cut(s)	1100
SmiMI	CAYNNNNRTG	1 cut(s)	1484
SmlI	CTYRAG	2 cut(s)	751, 1193
SmoI	CTYRAG	2 cut(s)	751, 1193
SsiI	CCGC	4 cut(s)	156, 1155, 1180, 1365
SspMI	CTAG	4 cut(s)	473, 482, 813, 1133
StyD4I	CCNGG	2 cut(s)	1342, 1423
StyI	CCWWGG	5 cut(s)	241, 516, 947, 1083, 1096
TaaI	ACNGT	6 cut(s)	130, 857, 893, 964, 1011, 1389
TaiI	ACGT	1 cut(s)	639
TaqI	TCGA	2 cut(s)	167, 1293
TatI	WGTACW	2 cut(s)	766, 1197
TfiI	GAWTC	5 cut(s)	83, 287, 882, 1401, 1506
Tru1I	TTAA	6 cut(s)	729, 752, 903, 996, 1140, 1289
Tru9I	TTAA	6 cut(s)	729, 752, 903, 996, 1140, 1289
TscAI	CASTG	8 cut(s)	862, 967, 1014, 1216, 1392, 1486, 1531, 1540
TseFI	GTSAC	1 cut(s)	1531
TseI	GCWGC	6 cut(s)	149, 776, 896, 1056, 1121, 1182
Tsp45I	GTSAC	1 cut(s)	1531
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	8 cut(s)	862, 967, 1014, 1216, 1392, 1486, 1531, 1540
Van91I	CCANNNNNTGG	1 cut(s)	1560
Vha464I	CTTAAG	1 cut(s)	751
VpaK11BI	GGWCC	1 cut(s)	1100
XapI	RAATTY	4 cut(s)	169, 194, 1451, 1633
XbaI	TCTAGA	1 cut(s)	812
XceI	RCATGY	1 cut(s)	423
XmiI	GTMKAC	2 cut(s)	1016, 1545
XspI	CTAG	4 cut(s)	473, 482, 813, 1133
ZrmI	AGTACT	1 cut(s)	768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.