Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000296

Physical Location & Seq

Genomic Coordinates Reverse (-)

66786728 .. 66798479

Gene Structure 11752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G037870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGGATGCATCACTCTCTGTAAACACGGGAGCAGAAATGTCGGGTTCTGGTGGGAGACAAGGTGGTTGGATCATCTCTTTAATTGTCATAGGAACTATAATGTGCTTGACGCTTGCCGCTGGAGGATGGCAAGCAAATTTGATTGGAATGGTCTTATTCACTTTGACTGCAACTGTTGACTCATTGAGGCCTCCAGCATGTGAGAATGGATCAATCTCATGCAGACCACCATCAAGAATTCAGTTTGCAGTCCTCTATGCCAGTATAGATCTAGCATCAAGTGGGGTGGGAGGCGATCGCTTTACTATAGCAACAATAGGAGCAAATCAATTTGATAAACTGAAATATCAAGGGATTTTCTTTAACTGGTTTTTCTTCACACTATATACAGCTTCTGTCATAAGTGCTACTGCCATTGTCTATATTGAGGACAATGTCAGTTGGGGATTAGGATTTGGCCTATGTGCTGTTGCTAATTTGATTGGTTTAATCATTTTCTTTATGGGGAGCCATTTATACCATCACGATAAGCCACAGTGTAGCCCATTCGATCATGAGTTTAGCTCGTGTTATGGTCGCAGTATCCAGAAAAGGAAGGTCCTACTCTCATCCGGGATAGATGATGACCACTACAGGAATGATGGAAAGGCAGAGATGGTGCCTGCAACACCTAAAAAGAGTTTCGGCTCTTTTTTGTTGCAGCTTTCTGAACCATGCTGTGCTGAAACTGAAGGAGACTGCAATGCGGATGGCTCAATTGCAAAGCCATGGTGGCTATGCACAATCCAACAAGTAGAAGACCTCAAAATTCTCACTAGAGTTTTCCCTTTGTGGTCAGCCAATACTTTTCTTAGTACTCACTTGGCTGACTTGCTTGCTAGCAAGTGCCGCAGTACGGTCCGCTTTGTGCACTGCAAAGTTCGGCCCATGACACTAGTCTTGGTTCCAATGTCCACCTGCTTTTCTCTCCCACTGATTGATCATTTCCTGAGCCCCATCTGTCATAAACTGACCCATCAATCTCCTACTCCACTTCACTTTGTGGTTGGTATTGGAGAAGCATTTCATGCTCGGGGCCAACTTCAATTGTTGTATCAAAAATTTCCAGTGTCACTTCAAAGCATGGCAACTGCAATGGTTGCAGTGATAGTTGGCATTGTTTACTACTTGGGCACAGCTTTGATTGATCTTGTTCGAAGAGTTACAGGATGGTTACCCGATAATATAAACCACGGGGGGCTAGATAATGTGTACAGCATGGTAGTGGTGATAGCTGTCTTAACTTCGGTTGTTATTTATCATGTGCCAAGTTGTACAAGAATCAGAATGTTAACAAGGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009268 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009987 GO:0010447 GO:0010542 GO:0015075 GO:0015103 GO:0015108 GO:0015112 GO:0015291 GO:0015318 GO:0015513 GO:0015562 GO:0015698 GO:0015706 GO:0016020 GO:0022804 GO:0022857 GO:0033554 GO:0034220 GO:0042221 GO:0043207 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0070887 GO:0071214 GO:0071470 GO:0071472 GO:0071705 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0104004 GO:1902074 GO:1902075 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

447

Amino Acids

48.95

Weight (kDa)

7.55

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	47 - 351	1.8e-33	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca	FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica	MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica	Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis	pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis	RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata	RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora	Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii	Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha	Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana	Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	965
Acc36I	ACCTGC	1 cut(s)	965
AccB1I	GGYRCC	1 cut(s)	658
AciI	CCGC	4 cut(s)	117, 746, 889, 901
AclWI	GGATC	2 cut(s)	77, 217
AcsI	RAATTY	4 cut(s)	136, 237, 807, 1100
AcuI	CTGAAG	1 cut(s)	750
AdeI	CACNNNGTG	1 cut(s)	1042
AfaI	GTAC	4 cut(s)	856, 895, 1253, 1315
AfiI	CCNNNNNNNGG	1 cut(s)	895
AgsI	TTSAA	2 cut(s)	1085, 1118
AhlI	ACTAGT	1 cut(s)	934
AluBI	AGCT	5 cut(s)	392, 564, 703, 1178, 1274
AluI	AGCT	5 cut(s)	392, 564, 703, 1178, 1274
Alw21I	GWGCWC	1 cut(s)	912
Alw26I	GTCTC	2 cut(s)	49, 729
Alw44I	GTGCAC	1 cut(s)	908
AlwI	GGATC	2 cut(s)	77, 217
AlwNI	CAGNNNCTG	1 cut(s)	395
Ama87I	CYCGRG	1 cut(s)	1071
AoxI	GGCC	4 cut(s)	188, 457, 923, 1075
ApaLI	GTGCAC	1 cut(s)	908
ApeKI	GCWGC	1 cut(s)	700
ApoI	RAATTY	4 cut(s)	136, 237, 807, 1100
AsiSI	GCGATCGC	1 cut(s)	298
Asp700I	GAANNNNTTC	1 cut(s)	1062
AspS9I	GGNCC	4 cut(s)	598, 898, 924, 1075
AsuC2I	CCSGG	1 cut(s)	613
AsuHPI	GGTGA	1 cut(s)	1279
AsuII	TTCGAA	1 cut(s)	1195
AsuNHI	GCTAGC	1 cut(s)	878
AvaI	CYCGRG	1 cut(s)	1071
AvaII	GGWCC	2 cut(s)	598, 898
BaeGI	GKGCMC	2 cut(s)	912, 1175
BanI	GGYRCC	1 cut(s)	658
BanII	GRGCYC	1 cut(s)	995
BauI	CACGAG	1 cut(s)	565
BbsI	GAAGAC	1 cut(s)	804
Bbv12I	GWGCWC	1 cut(s)	912
BbvI	GCAGC	1 cut(s)	712
BccI	CCATC	9 cut(s)	120, 238, 528, 635, 649, 743, 1004, 1023, 1203
BcgI	CGANNNNNNTGC	2 cut(s)	21, 55
BciVI	GTATCC	1 cut(s)	593
BclI	TGATCA	1 cut(s)	979
BcnI	CCSGG	1 cut(s)	613
BcoDI	GTCTC	2 cut(s)	49, 729
BcuI	ACTAGT	1 cut(s)	934
BfaI	CTAG	5 cut(s)	272, 816, 879, 935, 1241
BfmI	CTRYAG	2 cut(s)	306, 631
BfuAI	ACCTGC	1 cut(s)	965
BfuI	GTATCC	1 cut(s)	593
BglI	GCCNNNNNGGC	1 cut(s)	772
BglII	AGATCT	1 cut(s)	268
BisI	GCNGC	3 cut(s)	117, 701, 889
BlsI	GCNGC	3 cut(s)	118, 702, 890
BmcAI	AGTACT	1 cut(s)	856
Bme1390I	CCNGG	1 cut(s)	613
Bme18I	GGWCC	2 cut(s)	598, 898
BmeT110I	CYCGRG	1 cut(s)	1071
BmgT120I	GGNCC	4 cut(s)	598, 898, 924, 1075
BmiI	GGNNCC	4 cut(s)	509, 660, 945, 1076
BmrFI	CCNGG	1 cut(s)	613
BmsI	GCATC	2 cut(s)	17, 284
BmtI	GCTAGC	1 cut(s)	882
BoxI	GACNNNNGTC	1 cut(s)	935
BpiI	GAAGAC	1 cut(s)	804
BplI	GAGNNNNNCTC	2 cut(s)	548, 580
BpmI	CTGGAG	2 cut(s)	141, 177
Bpu10I	CCTNAGC	1 cut(s)	989
Bpu14I	TTCGAA	1 cut(s)	1195
BpuMI	CCSGG	1 cut(s)	613
BsaJI	CCNNGG	2 cut(s)	767, 1231
BsaXI	ACNNNNNCTCC	2 cut(s)	46, 76
Bsc4I	CCNNNNNNNGG	1 cut(s)	895
Bse1I	ACTGG	3 cut(s)	261, 371, 1106
Bse3DI	GCAATG	2 cut(s)	748, 1140
BseDI	CCNNGG	2 cut(s)	767, 1231
BseGI	GGATG	5 cut(s)	10, 131, 608, 754, 1214
BseLI	CCNNNNNNNGG	1 cut(s)	895
BseMI	GCAATG	2 cut(s)	748, 1140
BseMII	CTCAG	1 cut(s)	980
BseNI	ACTGG	3 cut(s)	261, 371, 1106
BseSI	GKGCMC	2 cut(s)	912, 1175
BseXI	GCAGC	1 cut(s)	712
Bsh1285I	CGRYCG	1 cut(s)	298
BshFI	GGCC	4 cut(s)	190, 459, 925, 1077
BshNI	GGYRCC	1 cut(s)	658
BsiEI	CGRYCG	1 cut(s)	298
BsiHKAI	GWGCWC	1 cut(s)	912
BsiHKCI	CYCGRG	1 cut(s)	1071
BsiSI	CCGG	1 cut(s)	612
BslI	CCNNNNNNNGG	1 cut(s)	895
BsmAI	GTCTC	2 cut(s)	49, 729
BsnI	GGCC	4 cut(s)	190, 459, 925, 1077
BsoBI	CYCGRG	1 cut(s)	1071
Bsp119I	TTCGAA	1 cut(s)	1195
Bsp1286I	GDGCHC	3 cut(s)	912, 995, 1175
Bsp1407I	TGTACA	2 cut(s)	1251, 1313
Bsp143I	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
Bsp19I	CCATGG	1 cut(s)	767
BspACI	CCGC	4 cut(s)	117, 746, 889, 901
BspANI	GGCC	4 cut(s)	190, 459, 925, 1077
BspCNI	CTCAG	1 cut(s)	981
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	4 cut(s)	509, 660, 945, 1076
BspMI	ACCTGC	1 cut(s)	965
BspOI	GCTAGC	1 cut(s)	882
BspPI	GGATC	2 cut(s)	77, 217
BspT104I	TTCGAA	1 cut(s)	1195
BspT107I	GGYRCC	1 cut(s)	658
BsrDI	GCAATG	2 cut(s)	748, 1140
BsrGI	TGTACA	2 cut(s)	1251, 1313
BsrI	ACTGG	3 cut(s)	261, 371, 1106
BssECI	CCNNGG	2 cut(s)	767, 1231
BssMI	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
BssSI	CACGAG	1 cut(s)	565
BssT1I	CCWWGG	1 cut(s)	767
Bst2BI	CACGAG	1 cut(s)	565
Bst4CI	ACNGT	3 cut(s)	175, 537, 898
Bst6I	CTCTTC	1 cut(s)	1192
BstAPI	GCANNNNNTGC	2 cut(s)	1067, 1139
BstAUI	TGTACA	2 cut(s)	1251, 1313
BstBI	TTCGAA	1 cut(s)	1195
BstC8I	GCNNGC	5 cut(s)	114, 132, 663, 876, 880
BstDEI	CTNAG	2 cut(s)	851, 989
BstDSI	CCRYGG	2 cut(s)	767, 1231
BstEII	GGTNACC	1 cut(s)	1212
BstF5I	GGATG	5 cut(s)	10, 131, 608, 754, 1214
BstKTI	GATC	7 cut(s)	72, 212, 271, 298, 553, 982, 1189
BstMAI	GTCTC	2 cut(s)	49, 729
BstMBI	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
BstMCI	CGRYCG	1 cut(s)	298
BstMWI	GCNNNNNNNGC	4 cut(s)	772, 888, 1067, 1139
BstNSI	RCATGY	1 cut(s)	201
BstPAI	GACNNNNGTC	1 cut(s)	935
BstPI	GGTNACC	1 cut(s)	1212
BstSCI	CCNGG	1 cut(s)	611
BstSFI	CTRYAG	2 cut(s)	306, 631
BstSLI	GKGCMC	2 cut(s)	912, 1175
BstV1I	GCAGC	1 cut(s)	712
BstV2I	GAAGAC	1 cut(s)	804
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
BsuI	GTATCC	1 cut(s)	593
BsuRI	GGCC	4 cut(s)	190, 459, 925, 1077
BtgI	CCRYGG	2 cut(s)	767, 1231
BtsCI	GGATG	5 cut(s)	10, 131, 608, 754, 1214
BtsI	GCAGTG	2 cut(s)	910, 1149
BtsIMutI	CAGTG	5 cut(s)	542, 910, 971, 1113, 1149
BveI	ACCTGC	1 cut(s)	965
Cac8I	GCNNGC	5 cut(s)	114, 132, 663, 876, 880
CaiI	CAGNNNCTG	1 cut(s)	395
CciI	TCATGA	1 cut(s)	553
Cfr13I	GGNCC	4 cut(s)	598, 898, 924, 1075
CpoI	CGGWCCG	1 cut(s)	898
CseI	GACGC	1 cut(s)	118
Csp6I	GTAC	4 cut(s)	855, 894, 1252, 1314
CspCI	CAANNNNNGTGG	2 cut(s)	267, 302
CspI	CGGWCCG	1 cut(s)	898
CviQI	GTAC	4 cut(s)	855, 894, 1252, 1314
DdeI	CTNAG	2 cut(s)	851, 989
DpnI	GATC	7 cut(s)	71, 211, 270, 297, 552, 981, 1188
DpnII	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
DraIII	CACNNNGTG	1 cut(s)	1042
Eam1104I	CTCTTC	1 cut(s)	1192
EarI	CTCTTC	1 cut(s)	1192
Eco130I	CCWWGG	1 cut(s)	767
Eco147I	AGGCCT	1 cut(s)	190
Eco24I	GRGCYC	1 cut(s)	995
Eco47I	GGWCC	2 cut(s)	598, 898
Eco57I	CTGAAG	1 cut(s)	750
Eco88I	CYCGRG	1 cut(s)	1071
Eco91I	GGTNACC	1 cut(s)	1212
EcoO109I	RGGNCCY	1 cut(s)	598
EcoO65I	GGTNACC	1 cut(s)	1212
EcoRI	GAATTC	1 cut(s)	237
EcoT14I	CCWWGG	1 cut(s)	767
EcoT22I	ATGCAT	1 cut(s)	10
EcoT38I	GRGCYC	1 cut(s)	995
ErhI	CCWWGG	1 cut(s)	767
FbaI	TGATCA	1 cut(s)	979
Fnu4HI	GCNGC	3 cut(s)	117, 701, 889
FokI	GGATG	5 cut(s)	17, 138, 595, 761, 1221
FriOI	GRGCYC	1 cut(s)	995
Fsp4HI	GCNGC	3 cut(s)	117, 701, 889
FspBI	CTAG	5 cut(s)	272, 816, 879, 935, 1241
GluI	GCNGC	3 cut(s)	117, 701, 889
GsuI	CTGGAG	2 cut(s)	141, 177
HaeIII	GGCC	4 cut(s)	190, 459, 925, 1077
HapII	CCGG	1 cut(s)	612
HgaI	GACGC	1 cut(s)	118
HincII	GTYRAC	2 cut(s)	178, 1332
HindII	GTYRAC	2 cut(s)	178, 1332
HinfI	GANTC	2 cut(s)	179, 1320
HpaI	GTTAAC	1 cut(s)	1332
HpaII	CCGG	1 cut(s)	612
HphI	GGTGA	1 cut(s)	1279
Hpy166II	GTNNAC	7 cut(s)	22, 178, 910, 954, 1162, 1252, 1332
Hpy188I	TCNGA	2 cut(s)	709, 1325
Hpy188III	TCNNGA	5 cut(s)	234, 524, 554, 586, 988
Hpy8I	GTNNAC	7 cut(s)	22, 178, 910, 954, 1162, 1252, 1332
HpyAV	CCTTC	2 cut(s)	589, 725
HpyCH4III	ACNGT	3 cut(s)	175, 537, 898
HpyF10VI	GCNNNNNNNGC	4 cut(s)	772, 888, 1067, 1139
HpyF3I	CTNAG	2 cut(s)	851, 989
Ksp22I	TGATCA	1 cut(s)	979
KspAI	GTTAAC	1 cut(s)	1332
Kzo9I	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
LmnI	GCTCC	3 cut(s)	29, 320, 507
Lsp1109I	GCAGC	1 cut(s)	712
LweI	GCATC	2 cut(s)	17, 284
MaeI	CTAG	5 cut(s)	272, 816, 879, 935, 1241
MaeIII	GTNAC	3 cut(s)	1110, 1201, 1212
MalI	GATC	7 cut(s)	71, 211, 270, 297, 552, 981, 1188
MboI	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
MboII	GAAGA	3 cut(s)	367, 809, 1209
MfeI	CAATTG	2 cut(s)	756, 1085
MflI	RGATCY	1 cut(s)	268
MhlI	GDGCHC	3 cut(s)	912, 995, 1175
MluCI	AATT	9 cut(s)	81, 136, 237, 329, 475, 756, 807, 1085, 1100
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	2 cut(s)	47, 811
MnlI	CCTC	7 cut(s)	116, 180, 201, 263, 284, 421, 812
Mph1103I	ATGCAT	1 cut(s)	10
MroXI	GAANNNNTTC	1 cut(s)	1062
MseI	TTAA	5 cut(s)	80, 363, 488, 1280, 1331
MslI	CAYNNNNRTG	1 cut(s)	1262
MspA1I	CMGCKG	1 cut(s)	119
MspI	CCGG	1 cut(s)	612
MspR9I	CCNGG	1 cut(s)	613
MunI	CAATTG	2 cut(s)	756, 1085
MwoI	GCNNNNNNNGC	4 cut(s)	772, 888, 1067, 1139
NciI	CCSGG	1 cut(s)	613
NcoI	CCATGG	1 cut(s)	767
NdeII	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
NheI	GCTAGC	1 cut(s)	878
NlaIV	GGNNCC	4 cut(s)	509, 660, 945, 1076
NmuCI	GTSAC	1 cut(s)	1110
NsiI	ATGCAT	1 cut(s)	10
NspI	RCATGY	1 cut(s)	201
NspV	TTCGAA	1 cut(s)	1195
PagI	TCATGA	1 cut(s)	553
PaqCI	CACCTGC	1 cut(s)	965
PceI	AGGCCT	1 cut(s)	190
PdmI	GAANNNNTTC	1 cut(s)	1062
PfeI	GAWTC	1 cut(s)	1320
PflFI	GACNNNGTC	1 cut(s)	434
PfoI	TCCNGGA	1 cut(s)	611
PkrI	GCNGC	3 cut(s)	118, 702, 890
Ple19I	CGATCG	1 cut(s)	298
PleI	GAGTC	1 cut(s)	173
PpsI	GAGTC	1 cut(s)	173
PpuMI	RGGWCCY	1 cut(s)	598
PshAI	GACNNNNGTC	1 cut(s)	935
Psp5II	RGGWCCY	1 cut(s)	598
PspEI	GGTNACC	1 cut(s)	1212
PspN4I	GGNNCC	4 cut(s)	509, 660, 945, 1076
PspPI	GGNCC	4 cut(s)	598, 898, 924, 1075
PspPPI	RGGWCCY	1 cut(s)	598
PstNI	CAGNNNCTG	1 cut(s)	395
PsuI	RGATCY	1 cut(s)	268
PsyI	GACNNNGTC	1 cut(s)	434
PvuI	CGATCG	1 cut(s)	298
RgaI	GCGATCGC	1 cut(s)	298
RsaI	GTAC	4 cut(s)	856, 895, 1253, 1315
RsaNI	GTAC	4 cut(s)	855, 894, 1252, 1314
RseI	CAYNNNNRTG	1 cut(s)	1262
Rsr2I	CGGWCCG	1 cut(s)	898
RsrII	CGGWCCG	1 cut(s)	898
SaqAI	TTAA	5 cut(s)	80, 363, 488, 1280, 1331
SatI	GCNGC	3 cut(s)	117, 701, 889
Sau3AI	GATC	7 cut(s)	69, 209, 268, 295, 550, 979, 1186
Sau96I	GGNCC	4 cut(s)	598, 898, 924, 1075
ScaI	AGTACT	1 cut(s)	856
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	1 cut(s)	613
SduI	GDGCHC	3 cut(s)	912, 995, 1175
SfaAI	GCGATCGC	1 cut(s)	298
SfaNI	GCATC	2 cut(s)	17, 284
SfcI	CTRYAG	2 cut(s)	306, 631
SfuI	TTCGAA	1 cut(s)	1195
SgfI	GCGATCGC	1 cut(s)	298
SinI	GGWCC	2 cut(s)	598, 898
SmiMI	CAYNNNNRTG	1 cut(s)	1262
SpeI	ACTAGT	1 cut(s)	934
Sse9I	AATT	9 cut(s)	81, 136, 237, 329, 475, 756, 807, 1085, 1100
SseBI	AGGCCT	1 cut(s)	190
SsiI	CCGC	4 cut(s)	117, 746, 889, 901
SspMI	CTAG	5 cut(s)	272, 816, 879, 935, 1241
StuI	AGGCCT	1 cut(s)	190
StyD4I	CCNGG	1 cut(s)	611
StyI	CCWWGG	1 cut(s)	767
TaaI	ACNGT	3 cut(s)	175, 537, 898
TaqI	TCGA	2 cut(s)	549, 1195
TasI	AATT	9 cut(s)	81, 136, 237, 329, 475, 756, 807, 1085, 1100
TatI	WGTACW	3 cut(s)	854, 1251, 1313
TauI	GCSGC	2 cut(s)	119, 891
TfiI	GAWTC	1 cut(s)	1320
Tru1I	TTAA	5 cut(s)	80, 363, 488, 1280, 1331
Tru9I	TTAA	5 cut(s)	80, 363, 488, 1280, 1331
TscAI	CASTG	5 cut(s)	542, 917, 978, 1113, 1149
TseFI	GTSAC	1 cut(s)	1110
TseI	GCWGC	1 cut(s)	700
Tsp45I	GTSAC	1 cut(s)	1110
TspDTI	ATGAA	1 cut(s)	1055
TspRI	CASTG	5 cut(s)	542, 917, 978, 1113, 1149
Tth111I	GACNNNGTC	1 cut(s)	434
VneI	GTGCAC	1 cut(s)	908
VpaK11BI	GGWCC	2 cut(s)	598, 898
XapI	RAATTY	4 cut(s)	136, 237, 807, 1100
XceI	RCATGY	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	1062
XspI	CTAG	5 cut(s)	272, 816, 879, 935, 1241
ZrmI	AGTACT	1 cut(s)	856
Zsp2I	ATGCAT	1 cut(s)	10

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.