Prupe.3G138100_v2.0.a1

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
14584127 .. 14586541
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G138100.1

Sequence Viewer

Length: 1308 bp
ATGGATGAGTCCCTTTCCCACAATGATGAAGCCCATGCATCATCATTGCATTCCGGTCGCAGGCGCGGTGGTTGGATCACTTTCCCATTCATTACTGGGGCTTTGGTAGGCCTGACACTTACAGCCGGAGGATGGCTCTCAAATTTGATTGTATTTCTGACTGAAGAATTCAATGTTAAGAGCATTGATGCTGCTCCGATTGCAAATGTGGTTCATGGTTCTTCAAGTTTTTTCCCAATCATCGGAGCAATCGTAGCTGACTTTCTCTTTGGCTCATTCTCCGTTATCTCAATTTCCTCTTGCATTTCCTTGCTGGGCATAATTGTCTTAGCATTAACCGCGACGCTGAATTCGTTGAGGCCTCAACCTTGTGTTGTGGGATCAGAGTTATGCCAACCCACTTCAACATTACAAGATGTAGTATTGTATGCTGGTAAAGCTCTAGCTTCTATTGGCTTGGGCTGTACCCGCTATACCCTAGCAACAATGGGAGCAAACCAGTTTGACAAGCCTAAGTATCAAGCGACTGTAGCCCTAACAGTTATTGTCTACATTGAGGACAATGCTGGATGGAGATGGGGGTTTGGCCTATGTGTCCTTACCAACATAATTAACATTGATAAGCCACAAGGAAGTCCATTTGTTGCTTTAGCTCGTGTTGTTGTTGCCGCTTTTCGAAAAAGGAAACTCCAGCTCTCCTCCGAAAGCAAGGATTATTATGATGGACATGATGGAGTGAAACAAGGCATGGTGACTGGAACACTTAGCACCAGTTTCAGCATATTCTTAAGTACCCCATTAGGAGTCCAGTCCAGCATGATAGTCCTGCAAGCTCTAAGCATGGACCGTCACATTGGGCCTCATTTCGAAATGCCATCTGGCTCTGTTATACTCATTGTCCTACTCTCCACAGCCATCTTTCTCACTCTTATTGATAGGTTCTTATGTCTCATGTGGCAGAAGCTGACTGGTCGATCTCCAACGTTCCTCCAATGTATAGGATTAGGCCACGTGTTAAATGTTCTTAGCATGGCTCTTTCAGCACTAGTAGACACATCGACGGCGATGATCTCGTTGGTCATTGGGATTGCATTTTATTTAAGCACAGGTGTGACTAATTTGGTTCAGTGCGTTACAAGGTGGTTACCAAACGATATAAATAATGGGAAGCTAGACAATGTGTATTGGATGTTAGTTGTTGTTGGGGTGCTCAATTTTGGTTATTATCTAGTGTGCGGTAAGTTGTACAAGTATCAAAATGTTAAGGATGCAGATGTTAATTCTGGCTCTGTTGATAGTGAAAAGTGA

Protein Analysis

436

Amino Acids

46.93

Weight (kDa)

7.05

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000296)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 549, 1050
AccII CGCG 2 cut(s) 66, 341
AciI CCGC 5 cut(s) 66, 339, 469, 669, 1236
AclI AACGTT 1 cut(s) 983
AclWI GGATC 2 cut(s) 83, 388
AcsI RAATTY 3 cut(s) 142, 167, 349
AcuI CTGAAG 1 cut(s) 183
AcvI CACGTG 1 cut(s) 1012
AfaI GTAC 3 cut(s) 466, 793, 1247
AfiI CCNNNNNNNGG 3 cut(s) 60, 132, 242
AflII CTTAAG 1 cut(s) 787
AflIII ACRYGT 1 cut(s) 1011
AgsI TTSAA 3 cut(s) 172, 225, 405
AhlI ACTAGT 1 cut(s) 1045
AleI CACNNNNGTG 1 cut(s) 1109
AluBI AGCT 8 cut(s) 257, 440, 446, 653, 694, 833, 964, 1171
AluI AGCT 8 cut(s) 257, 440, 446, 653, 694, 833, 964, 1171
Alw21I GWGCWC 1 cut(s) 1212
Alw26I GTCTC 1 cut(s) 953
AlwI GGATC 2 cut(s) 83, 388
AlwNI CAGNNNCTG 1 cut(s) 964
AoxI GGCC 5 cut(s) 109, 359, 586, 857, 1006
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 3 cut(s) 142, 167, 349
ArsI GACNNNNNNTTYG 4 cut(s) 251, 283, 334, 366
AspLEI GCGC 1 cut(s) 66
AspS9I GGNCC 2 cut(s) 844, 857
AsuHPI GGTGA 1 cut(s) 763
AsuII TTCGAA 2 cut(s) 676, 867
AvaII GGWCC 1 cut(s) 844
BauI CACGAG 1 cut(s) 654
BbrPI CACGTG 1 cut(s) 1012
Bbv12I GWGCWC 1 cut(s) 1212
BbvI GCAGC 1 cut(s) 178
BccI CCATC 7 cut(s) 126, 564, 570, 716, 725, 883, 923
BceAI ACGGC 1 cut(s) 1077
BcgI CGANNNNNNTGC 2 cut(s) 38, 72
BcoDI GTCTC 1 cut(s) 953
BcuI ACTAGT 1 cut(s) 1045
BfaI CTAG 5 cut(s) 443, 479, 1046, 1172, 1229
BfmI CTRYAG 1 cut(s) 528
BfrI CTTAAG 1 cut(s) 787
BisI GCNGC 2 cut(s) 192, 669
BlsI GCNGC 2 cut(s) 193, 670
Bme18I GGWCC 1 cut(s) 844
BmgT120I GGNCC 2 cut(s) 844, 857
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 3 cut(s) 47, 178, 1258
BmuI ACTGGG 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 120, 152
BpmI CTGGAG 1 cut(s) 674
Bpu14I TTCGAA 2 cut(s) 676, 867
BsaAI YACGTR 1 cut(s) 1012
BsaWI WCCGGW 1 cut(s) 53
BsaXI ACNNNNNCTCC 2 cut(s) 237, 267
Bsc4I CCNNNNNNNGG 3 cut(s) 60, 132, 242
Bse1I ACTGG 6 cut(s) 100, 499, 760, 771, 808, 973
Bse3DI GCAATG 1 cut(s) 44
BseGI GGATG 5 cut(s) 10, 137, 575, 1194, 1273
BseLI CCNNNNNNNGG 3 cut(s) 60, 132, 242
BseMI GCAATG 1 cut(s) 44
BseNI ACTGG 6 cut(s) 100, 499, 760, 771, 808, 973
BseRI GAGGAG 1 cut(s) 688
BseXI GCAGC 1 cut(s) 178
BseYI CCCAGC 1 cut(s) 313
Bsh1236I CGCG 2 cut(s) 66, 341
Bsh1285I CGRYCG 1 cut(s) 58
BshFI GGCC 5 cut(s) 111, 361, 588, 859, 1008
BsiEI CGRYCG 1 cut(s) 58
BsiHKAI GWGCWC 1 cut(s) 1212
BsiSI CCGG 2 cut(s) 54, 126
BslI CCNNNNNNNGG 3 cut(s) 60, 132, 242
BsmAI GTCTC 1 cut(s) 953
BsmI GAATGC 1 cut(s) 49
BsnI GGCC 5 cut(s) 111, 361, 588, 859, 1008
Bsp119I TTCGAA 2 cut(s) 676, 867
Bsp1286I GDGCHC 1 cut(s) 1212
Bsp1407I TGTACA 1 cut(s) 1245
Bsp143I GATC 4 cut(s) 75, 380, 974, 1068
BspACI CCGC 5 cut(s) 66, 339, 469, 669, 1236
BspANI GGCC 5 cut(s) 111, 361, 588, 859, 1008
BspFNI CGCG 2 cut(s) 66, 341
BspPI GGATC 2 cut(s) 83, 388
BspT104I TTCGAA 2 cut(s) 676, 867
BspTI CTTAAG 1 cut(s) 787
BsrDI GCAATG 1 cut(s) 44
BsrGI TGTACA 1 cut(s) 1245
BsrI ACTGG 6 cut(s) 100, 499, 760, 771, 808, 973
BssMI GATC 4 cut(s) 75, 380, 974, 1068
BssSI CACGAG 1 cut(s) 654
Bst2BI CACGAG 1 cut(s) 654
Bst4CI ACNGT 3 cut(s) 529, 541, 848
BstAFI CTTAAG 1 cut(s) 787
BstAUI TGTACA 1 cut(s) 1245
BstBAI YACGTR 1 cut(s) 1012
BstBI TTCGAA 2 cut(s) 676, 867
BstC8I GCNNGC 2 cut(s) 62, 831
BstDEI CTNAG 5 cut(s) 328, 513, 764, 836, 1025
BstEII GGTNACC 1 cut(s) 1143
BstF5I GGATG 5 cut(s) 10, 137, 575, 1194, 1273
BstFNI CGCG 2 cut(s) 66, 341
BstHHI GCGC 1 cut(s) 66
BstKTI GATC 4 cut(s) 78, 383, 977, 1071
BstMAI GTCTC 1 cut(s) 953
BstMBI GATC 4 cut(s) 75, 380, 974, 1068
BstMCI CGRYCG 1 cut(s) 58
BstMWI GCNNNNNNNGC 7 cut(s) 200, 254, 338, 437, 468, 530, 1040
BstPI GGTNACC 1 cut(s) 1143
BstSFI CTRYAG 1 cut(s) 528
BstUI CGCG 2 cut(s) 66, 341
BstV1I GCAGC 1 cut(s) 178
BsuRI GGCC 5 cut(s) 111, 361, 588, 859, 1008
BtgZI GCGATG 1 cut(s) 1079
BtsCI GGATG 5 cut(s) 10, 137, 575, 1194, 1273
BtsIMutI CAGTG 1 cut(s) 1133
Cac8I GCNNGC 2 cut(s) 62, 831
CaiI CAGNNNCTG 1 cut(s) 964
CfoI GCGC 1 cut(s) 66
Cfr13I GGNCC 2 cut(s) 844, 857
CseI GACGC 1 cut(s) 352
Csp6I GTAC 3 cut(s) 465, 792, 1246
CviAII CATG 8 cut(s) 35, 215, 728, 748, 817, 841, 952, 1030
CviQI GTAC 3 cut(s) 465, 792, 1246
DdeI CTNAG 5 cut(s) 328, 513, 764, 836, 1025
DpnI GATC 4 cut(s) 77, 382, 976, 1070
DpnII GATC 4 cut(s) 75, 380, 974, 1068
Eco147I AGGCCT 2 cut(s) 111, 361
Eco47I GGWCC 1 cut(s) 844
Eco57I CTGAAG 1 cut(s) 183
Eco72I CACGTG 1 cut(s) 1012
Eco91I GGTNACC 1 cut(s) 1143
EcoO65I GGTNACC 1 cut(s) 1143
EcoRI GAATTC 2 cut(s) 167, 349
EcoT22I ATGCAT 1 cut(s) 40
FaeI CATG 8 cut(s) 38, 218, 731, 751, 820, 844, 955, 1033
FatI CATG 8 cut(s) 34, 214, 727, 747, 816, 840, 951, 1029
FauI CCCGC 1 cut(s) 476
FblI GTMKAC 2 cut(s) 549, 1050
Fnu4HI GCNGC 2 cut(s) 192, 669
FokI GGATG 5 cut(s) 17, 144, 582, 1201, 1280
Fsp4HI GCNGC 2 cut(s) 192, 669
FspBI CTAG 5 cut(s) 443, 479, 1046, 1172, 1229
GlaI GCGC 1 cut(s) 65
GluI GCNGC 2 cut(s) 192, 669
GsaI CCCAGC 1 cut(s) 317
GsuI CTGGAG 1 cut(s) 674
HaeIII GGCC 5 cut(s) 111, 361, 588, 859, 1008
HapII CCGG 2 cut(s) 54, 126
HgaI GACGC 1 cut(s) 352
HhaI GCGC 1 cut(s) 66
Hin1II CATG 8 cut(s) 38, 218, 731, 751, 820, 844, 955, 1033
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HinfI GANTC 2 cut(s) 8, 804
HpaII CCGG 2 cut(s) 54, 126
HphI GGTGA 1 cut(s) 763
Hpy166II GTNNAC 2 cut(s) 550, 1051
Hpy188I TCNGA 5 cut(s) 159, 198, 245, 385, 703
Hpy8I GTNNAC 2 cut(s) 550, 1051
Hpy99I CGWCG 2 cut(s) 346, 1063
HpyCH4III ACNGT 3 cut(s) 529, 541, 848
HpyCH4IV ACGT 2 cut(s) 983, 1011
HpyCH4V TGCA 7 cut(s) 38, 49, 203, 303, 829, 1091, 1271
HpyF10VI GCNNNNNNNGC 7 cut(s) 200, 254, 338, 437, 468, 530, 1040
HpyF3I CTNAG 5 cut(s) 328, 513, 764, 836, 1025
HpySE526I ACGT 2 cut(s) 983, 1011
Hsp92II CATG 8 cut(s) 38, 218, 731, 751, 820, 844, 955, 1033
HspAI GCGC 1 cut(s) 64
Kzo9I GATC 4 cut(s) 75, 380, 974, 1068
LmnI GCTCC 3 cut(s) 199, 245, 491
Lsp1109I GCAGC 1 cut(s) 178
LweI GCATC 3 cut(s) 47, 178, 1258
MaeI CTAG 5 cut(s) 443, 479, 1046, 1172, 1229
MaeII ACGT 2 cut(s) 983, 1011
MaeIII GTNAC 5 cut(s) 751, 848, 1111, 1132, 1143
MalI GATC 4 cut(s) 77, 382, 976, 1070
MboI GATC 4 cut(s) 75, 380, 974, 1068
MboII GAAGA 2 cut(s) 176, 213
MhlI GDGCHC 1 cut(s) 1212
MluCI AATT 9 cut(s) 142, 167, 291, 321, 349, 609, 1117, 1213, 1279
MlyI GAGTC 2 cut(s) 17, 813
MmeI TCCRAC 2 cut(s) 53, 1004
MnlI CCTC 8 cut(s) 122, 307, 351, 372, 550, 709, 870, 998
Mph1103I ATGCAT 1 cut(s) 40
MseI TTAA 8 cut(s) 177, 335, 612, 788, 1016, 1100, 1263, 1278
MslI CAYNNNNRTG 2 cut(s) 24, 1109
MspCI CTTAAG 1 cut(s) 787
MspI CCGG 2 cut(s) 54, 126
Mva1269I GAATGC 1 cut(s) 49
MvnI CGCG 2 cut(s) 66, 341
MwoI GCNNNNNNNGC 7 cut(s) 200, 254, 338, 437, 468, 530, 1040
NdeII GATC 4 cut(s) 75, 380, 974, 1068
NlaIII CATG 8 cut(s) 38, 218, 731, 751, 820, 844, 955, 1033
NmuCI GTSAC 3 cut(s) 751, 848, 1111
NsiI ATGCAT 1 cut(s) 40
NspV TTCGAA 2 cut(s) 676, 867
OliI CACNNNNGTG 1 cut(s) 1109
PceI AGGCCT 2 cut(s) 111, 361
PcsI WCGNNNNNNNCGW 2 cut(s) 249, 350
PctI GAATGC 1 cut(s) 49
PkrI GCNGC 2 cut(s) 193, 670
PleI GAGTC 2 cut(s) 16, 812
PmaCI CACGTG 1 cut(s) 1012
PmlI CACGTG 1 cut(s) 1012
PpsI GAGTC 2 cut(s) 16, 812
Ppu21I YACGTR 1 cut(s) 1012
Psp1406I AACGTT 1 cut(s) 983
PspCI CACGTG 1 cut(s) 1012
PspEI GGTNACC 1 cut(s) 1143
PspFI CCCAGC 1 cut(s) 313
PspPI GGNCC 2 cut(s) 844, 857
PstNI CAGNNNCTG 1 cut(s) 964
RsaI GTAC 3 cut(s) 466, 793, 1247
RsaNI GTAC 3 cut(s) 465, 792, 1246
RseI CAYNNNNRTG 2 cut(s) 24, 1109
SaqAI TTAA 8 cut(s) 177, 335, 612, 788, 1016, 1100, 1263, 1278
SatI GCNGC 2 cut(s) 192, 669
Sau3AI GATC 4 cut(s) 75, 380, 974, 1068
Sau96I GGNCC 2 cut(s) 844, 857
SchI GAGTC 2 cut(s) 17, 813
SduI GDGCHC 1 cut(s) 1212
SfaNI GCATC 3 cut(s) 47, 178, 1258
SfcI CTRYAG 1 cut(s) 528
SfuI TTCGAA 2 cut(s) 676, 867
SinI GGWCC 1 cut(s) 844
SmiMI CAYNNNNRTG 2 cut(s) 24, 1109
SmlI CTYRAG 1 cut(s) 787
SmoI CTYRAG 1 cut(s) 787
SpeI ACTAGT 1 cut(s) 1045
Sse9I AATT 9 cut(s) 142, 167, 291, 321, 349, 609, 1117, 1213, 1279
SseBI AGGCCT 2 cut(s) 111, 361
SsiI CCGC 5 cut(s) 66, 339, 469, 669, 1236
SspMI CTAG 5 cut(s) 443, 479, 1046, 1172, 1229
StuI AGGCCT 2 cut(s) 111, 361
TaaI ACNGT 3 cut(s) 529, 541, 848
TaiI ACGT 2 cut(s) 986, 1014
TaqI TCGA 4 cut(s) 676, 867, 973, 1058
TasI AATT 9 cut(s) 142, 167, 291, 321, 349, 609, 1117, 1213, 1279
TatI WGTACW 1 cut(s) 1245
TauI GCSGC 1 cut(s) 671
Tru1I TTAA 8 cut(s) 177, 335, 612, 788, 1016, 1100, 1263, 1278
Tru9I TTAA 8 cut(s) 177, 335, 612, 788, 1016, 1100, 1263, 1278
TscAI CASTG 1 cut(s) 1133
TseFI GTSAC 3 cut(s) 751, 848, 1111
TseI GCWGC 1 cut(s) 191
Tsp45I GTSAC 3 cut(s) 751, 848, 1111
TspDTI ATGAA 3 cut(s) 42, 79, 203
TspGWI ACGGA 1 cut(s) 271
TspRI CASTG 1 cut(s) 1133
Vha464I CTTAAG 1 cut(s) 787
VpaK11BI GGWCC 1 cut(s) 844
XapI RAATTY 3 cut(s) 142, 167, 349
XmiI GTMKAC 2 cut(s) 549, 1050
XspI CTAG 5 cut(s) 443, 479, 1046, 1172, 1229
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.