Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006608.1

Orthogroup ID

OG0000296

Physical Location & Seq

Genomic Coordinates Reverse (-)

48791 .. 55519

Gene Structure 6729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006608.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

atggctagctccctctcccctctgtcatcagattccgctagcaggcgcggtggttggatcactttccccttcatcactgggactatggcaggcttgacactcgcagccggaggatgggtttcaaatctgattgtgtacctgattcaagaattcaatgtaaagagcattgatgcagcccaggtttcaaacgtgatcaatggatctaccagcttttttccagtcattggagccatcatagctgactctttcttaggctcattcccagttatctcagtttcctcattcatttctttgctggggatatctcttttagcattaactgcaacacttagttcattaaagcctcaaccttgtgttatcggatcggagttatgccaacccaccaccaaacttcaacttgcaatcttgtacacaagtataactctggcatcgattggctcgggcggcacacgttttacactggcaacaattggagctaatcaatttgataagcctaagaatcaatcaacattcttcaactggttcttcttcaccttttatgttgcttcagtggcaagtgctacagtcattgtgtacgttgaggacaatgtgggatggaaatgggggtttgccctatgtgccattgccaacctaattggcttggccattttcttgtctgggacccgtttctaccgttttgataagccgcaaggcagtccattcattggtttagctcgtgttattgttgctactactcggaaacggaatctccagatctcatctgatgaaagcagagattattactatgggcatggtagagtgacagatgtagtggctgcaccgccgagcaagagcttcaggttgcttaaccatgcagcgcagaaaattgaaggagacataaaaccagatggttcaattctgaaaccgtggagactatgcacagttcagcaagtagaagatttcaagacccttgtgagaattttgccattgtggtcaagtagcatattcttaggtaccccaatagcagtacaatccagcttgactatactccaggctctcagcatggaccgtcacctcggtcctcatttcaaaataccagccgggtctatttacgttgttgtactaatctcctgcgccctttttctcgccgtcattgataggttcttatgtcccatgtggcagaagctgattggtcggtttccgtcgcccctccaacgcatagggttaggccatgtgctaaatgtgctcagcatggctgtttcagcactggttgaatccaaaaggttaaaaatcgccaaagaccaccaactccaagaccagcctggtgctatcaccccaatgctggccttgtggcttttcccacagttagttttggtaggcgttggagaggcatttcattttccaggacaagttgcattgtattaccaagaatttcccgtgtcactgcgaagcacatcgacggcaatgatttcattgatcatcgggatttcgttttatctaagcacgggcctgatcgattttgttcggagggttacaagttggctaccagacaatataaacaatgggaagctagagaatgtgtattggatgctagttgtggttggggtgataaactttggttattatttagtggaattgccggccaaattaagagtgagggagagaacgcgcctcacgcgcggagaaaaacctaggggaggtcgagggtgctctctcccggccggatgccgccggcgcccttgccgctgcgttccggtccgggaggggatgataacaggggcttgcggcgtggttcgtgggcaaaggactgactcagggatggaggaaggtgcggtggctgcatctggatctgtggcgtggctgaggattgagaccggtccagcgttggatcttagtcggattggggaggcattttgcgtcggtcggaaggtgtggcgggatctacggtttgctgtgctggatcggtggatcgactgcgatcctttgttgtttgccttcgggtcctatcgtagatccatgggttttgggtgtttgggtctacggaggtgcgcgaggtcaggcaggctggggagagctggtcctggggatctgacgctggtgatggagcggcaggaatggtggggacgcgacggtgcaggtgcagttgcagcgggtgacgtgggtcatcggcgtggtgtgatttgccggtgggcaacgatttgccggcggcagccttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009268 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009987 GO:0010447 GO:0010542 GO:0015075 GO:0015103 GO:0015108 GO:0015112 GO:0015291 GO:0015318 GO:0015513 GO:0015562 GO:0015698 GO:0015706 GO:0016020 GO:0022804 GO:0022857 GO:0033554 GO:0034220 GO:0042221 GO:0043207 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0070887 GO:0071214 GO:0071470 GO:0071472 GO:0071705 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0104004 GO:1902074 GO:1902075 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

731

Amino Acids

79.99

Weight (kDa)

9.77

Isoelectric Point (pI)

42.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca	FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica	MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica	Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis	pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis	RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata	RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora	Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii	Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha	Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana	Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2105
Acc36I	ACCTGC	1 cut(s)	2105
Acc65I	GGTACC	1 cut(s)	992
AccB1I	GGYRCC	2 cut(s)	992, 1713
AccB7I	CCANNNNNTGG	2 cut(s)	224, 704
AccBSI	CCGCTC	1 cut(s)	2086
AccI	GTMKAC	1 cut(s)	2017
AccII	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
AcoI	YGGCCR	3 cut(s)	642, 1620, 1698
AcsI	RAATTY	3 cut(s)	149, 957, 1409
AcuI	CTGAAG	2 cut(s)	531, 820
AcyI	GRCGYC	1 cut(s)	1714
AfaI	GTAC	6 cut(s)	137, 410, 575, 994, 1008, 1101
AfiI	CCNNNNNNNGG	6 cut(s)	42, 114, 224, 704, 1321, 1676
AflIII	ACRYGT	1 cut(s)	449
AgeI	ACCGGT	1 cut(s)	1853
AjiI	CACGTC	1 cut(s)	2137
AjnI	CCWGG	5 cut(s)	177, 1029, 1300, 1381, 2059
Alw21I	GWGCWC	2 cut(s)	1227, 1691
Alw26I	GTCTC	3 cut(s)	867, 904, 1844
AlwNI	CAGNNNCTG	1 cut(s)	1165
Ama87I	CYCGRG	1 cut(s)	439
AoxI	GGCC	6 cut(s)	642, 1207, 1323, 1486, 1620, 1698
ApeKI	GCWGC	8 cut(s)	104, 173, 815, 854, 1725, 1817, 2126, 2188
ApoI	RAATTY	3 cut(s)	149, 957, 1409
AsiGI	ACCGGT	1 cut(s)	1853
Asp718I	GGTACC	1 cut(s)	992
AspA2I	CCTAGG	1 cut(s)	1670
AspLEI	GCGC	7 cut(s)	48, 859, 1115, 1650, 1659, 1716, 2030
AspS9I	GGNCC	8 cut(s)	660, 1045, 1058, 1486, 1735, 1856, 1980, 2057
AsuC2I	CCSGG	3 cut(s)	1081, 1697, 1739
AsuHPI	GGTGA	6 cut(s)	523, 1043, 1303, 1597, 2089, 2144
AsuNHI	GCTAGC	2 cut(s)	5, 38
AvaI	CYCGRG	1 cut(s)	439
AvaII	GGWCC	7 cut(s)	660, 1045, 1058, 1735, 1856, 1980, 2057
AvrII	CCTAGG	1 cut(s)	1670
BalI	TGGCCA	1 cut(s)	644
BanI	GGYRCC	2 cut(s)	992, 1713
BauI	CACGAG	1 cut(s)	714
Bbv12I	GWGCWC	2 cut(s)	1227, 1691
BbvCI	CCTCAGC	1 cut(s)	1841
BbvI	GCAGC	7 cut(s)	116, 185, 802, 866, 1712, 1804, 2138
BccI	CCATC	6 cut(s)	108, 239, 588, 881, 1792, 2074
BceAI	ACGGC	2 cut(s)	1112, 1455
BciT130I	CCWGG	5 cut(s)	179, 1031, 1302, 1383, 2061
BclI	TGATCA	2 cut(s)	192, 1455
BcnI	CCSGG	3 cut(s)	1081, 1697, 1739
BcoDI	GTCTC	3 cut(s)	867, 904, 1844
BfaI	CTAG	5 cut(s)	6, 39, 1550, 1571, 1671
BfmI	CTRYAG	1 cut(s)	561
BfoI	RGCGCY	1 cut(s)	1717
BfuAI	ACCTGC	1 cut(s)	2105
BglII	AGATCT	1 cut(s)	753
BlnI	CCTAGG	1 cut(s)	1670
BlpI	GCTNAGC	1 cut(s)	1226
Bme1390I	CCNGG	8 cut(s)	179, 1031, 1081, 1302, 1383, 1697, 1739, 2061
Bme18I	GGWCC	7 cut(s)	660, 1045, 1058, 1735, 1856, 1980, 2057
BmeT110I	CYCGRG	1 cut(s)	439
BmgBI	CACGTC	1 cut(s)	2137
BmgT120I	GGNCC	8 cut(s)	660, 1045, 1058, 1486, 1735, 1856, 1980, 2057
BmiI	GGNNCC	6 cut(s)	229, 661, 662, 994, 1715, 1981
BmrFI	CCNGG	8 cut(s)	179, 1031, 1081, 1302, 1383, 1697, 1739, 2061
BmrI	ACTGGG	2 cut(s)	87, 257
BmsI	GCATC	5 cut(s)	160, 437, 1557, 1694, 1829
BmtI	GCTAGC	2 cut(s)	9, 42
BmuI	ACTGGG	2 cut(s)	87, 257
BoxI	GACNNNNGTC	1 cut(s)	2139
BpmI	CTGGAG	2 cut(s)	734, 1013
Bpu10I	CCTNAGC	1 cut(s)	1841
Bpu1102I	GCTNAGC	1 cut(s)	1226
BpuMI	CCSGG	3 cut(s)	1081, 1697, 1739
Bsa29I	ATCGAT	2 cut(s)	431, 1494
BsaHI	GRCGYC	1 cut(s)	1714
BsaI	GGTCTC	1 cut(s)	1844
BsaJI	CCNNGG	6 cut(s)	177, 905, 1054, 1670, 1995, 2060
BsaWI	WCCGGW	2 cut(s)	1732, 1853
BsaXI	ACNNNNNCTCC	6 cut(s)	102, 132, 732, 762, 2041, 2071
Bsc4I	CCNNNNNNNGG	6 cut(s)	42, 114, 224, 704, 1321, 1676
Bse118I	RCCGGY	5 cut(s)	1618, 1710, 1853, 2163, 2181
Bse1I	ACTGG	6 cut(s)	82, 218, 263, 465, 524, 1251
Bse3DI	GCAATG	2 cut(s)	621, 1449
BseBI	CCWGG	5 cut(s)	179, 1031, 1302, 1383, 2061
BseCI	ATCGAT	2 cut(s)	431, 1494
BseDI	CCNNGG	6 cut(s)	177, 905, 1054, 1670, 1995, 2060
BseGI	GGATG	6 cut(s)	119, 599, 1572, 1709, 1752, 1803
BseLI	CCNNNNNNNGG	6 cut(s)	42, 114, 224, 704, 1321, 1676
BseMI	GCAATG	2 cut(s)	621, 1449
BseMII	CTCAG	5 cut(s)	285, 1051, 1240, 1806, 1832
BseNI	ACTGG	6 cut(s)	82, 218, 263, 465, 524, 1251
BseX3I	CGGCCG	1 cut(s)	1698
BseXI	GCAGC	7 cut(s)	116, 185, 802, 866, 1712, 1804, 2138
BseYI	CCCAGC	2 cut(s)	295, 2044
BsgI	GTGCAG	3 cut(s)	801, 2133, 2139
Bsh1236I	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
Bsh1285I	CGRYCG	2 cut(s)	1701, 1903
BshFI	GGCC	6 cut(s)	644, 1209, 1325, 1488, 1622, 1700
BshNI	GGYRCC	2 cut(s)	992, 1713
BshTI	ACCGGT	1 cut(s)	1853
BshVI	ATCGAT	2 cut(s)	431, 1494
BsiEI	CGRYCG	2 cut(s)	1701, 1903
BsiHKAI	GWGCWC	2 cut(s)	1227, 1691
BsiHKCI	CYCGRG	1 cut(s)	439
BslFI	GGGAC	4 cut(s)	94, 673, 1134, 2115
BslI	CCNNNNNNNGG	6 cut(s)	42, 114, 224, 704, 1321, 1676
BsmAI	GTCTC	3 cut(s)	867, 904, 1844
BsmFI	GGGAC	4 cut(s)	94, 673, 1134, 2115
BsnI	GGCC	6 cut(s)	644, 1209, 1325, 1488, 1622, 1700
Bso31I	GGTCTC	1 cut(s)	1844
BsoBI	CYCGRG	1 cut(s)	439
Bsp1286I	GDGCHC	2 cut(s)	1227, 1691
Bsp1407I	TGTACA	1 cut(s)	408
Bsp1720I	GCTNAGC	1 cut(s)	1226
Bsp19I	CCATGG	1 cut(s)	1995
BspANI	GGCC	6 cut(s)	644, 1209, 1325, 1488, 1622, 1700
BspCNI	CTCAG	5 cut(s)	284, 1050, 1239, 1805, 1833
BspDI	ATCGAT	2 cut(s)	431, 1494
BspFNI	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
BspLI	GGNNCC	6 cut(s)	229, 661, 662, 994, 1715, 1981
BspMI	ACCTGC	1 cut(s)	2105
BspOI	GCTAGC	2 cut(s)	9, 42
BspT107I	GGYRCC	2 cut(s)	992, 1713
BspTNI	GGTCTC	1 cut(s)	1844
BsrBI	CCGCTC	1 cut(s)	2086
BsrDI	GCAATG	2 cut(s)	621, 1449
BsrFI	RCCGGY	5 cut(s)	1618, 1710, 1853, 2163, 2181
BsrGI	TGTACA	1 cut(s)	408
BsrI	ACTGG	6 cut(s)	82, 218, 263, 465, 524, 1251
BssAI	RCCGGY	5 cut(s)	1618, 1710, 1853, 2163, 2181
BssECI	CCNNGG	6 cut(s)	177, 905, 1054, 1670, 1995, 2060
BssNI	GRCGYC	1 cut(s)	1714
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	2 cut(s)	1670, 1995
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	5 cut(s)	179, 1031, 1302, 1383, 2061
Bst4CI	ACNGT	8 cut(s)	565, 674, 906, 922, 1049, 1344, 1926, 2111
BstACI	GRCGYC	1 cut(s)	1714
BstAPI	GCANNNNNTGC	1 cut(s)	320
BstAUI	TGTACA	1 cut(s)	408
BstDSI	CCRYGG	2 cut(s)	905, 1995
BstENI	CCTNNNNNAGG	1 cut(s)	1674
BstF5I	GGATG	6 cut(s)	119, 599, 1572, 1709, 1752, 1803
BstFNI	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
BstH2I	RGCGCY	1 cut(s)	1717
BstHHI	GCGC	7 cut(s)	48, 859, 1115, 1650, 1659, 1716, 2030
BstMAI	GTCTC	3 cut(s)	867, 904, 1844
BstMCI	CGRYCG	2 cut(s)	1701, 1903
BstNI	CCWGG	5 cut(s)	179, 1031, 1302, 1383, 2061
BstPAI	GACNNNNGTC	1 cut(s)	2139
BstSCI	CCNGG	8 cut(s)	177, 1029, 1079, 1300, 1381, 1695, 1737, 2059
BstSFI	CTRYAG	1 cut(s)	561
BstUI	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
BstV1I	GCAGC	7 cut(s)	116, 185, 802, 866, 1712, 1804, 2138
BstX2I	RGATCY	7 cut(s)	200, 753, 1826, 1867, 1918, 1991, 2065
BstYI	RGATCY	7 cut(s)	200, 753, 1826, 1867, 1918, 1991, 2065
BstZI	CGGCCG	1 cut(s)	1698
Bsu15I	ATCGAT	2 cut(s)	431, 1494
BsuRI	GGCC	6 cut(s)	644, 1209, 1325, 1488, 1622, 1700
BsuTUI	ATCGAT	2 cut(s)	431, 1494
BtgI	CCRYGG	2 cut(s)	905, 1995
BtrI	CACGTC	1 cut(s)	2137
BtsCI	GGATG	6 cut(s)	119, 599, 1572, 1709, 1752, 1803
BtsI	GCAGTG	1 cut(s)	1421
BtsIMutI	CAGTG	5 cut(s)	75, 458, 555, 1244, 1421
BveI	ACCTGC	1 cut(s)	2105
CaiI	CAGNNNCTG	1 cut(s)	1165
CfoI	GCGC	7 cut(s)	48, 859, 1115, 1650, 1659, 1716, 2030
Cfr10I	RCCGGY	5 cut(s)	1618, 1710, 1853, 2163, 2181
Cfr13I	GGNCC	8 cut(s)	660, 1045, 1058, 1486, 1735, 1856, 1980, 2057
ClaI	ATCGAT	2 cut(s)	431, 1494
CpoI	CGGWCCG	1 cut(s)	1735
CseI	GACGC	3 cut(s)	1885, 2080, 2112
Csp6I	GTAC	6 cut(s)	136, 409, 574, 993, 1007, 1100
CspAI	ACCGGT	1 cut(s)	1853
CspI	CGGWCCG	1 cut(s)	1735
CviAII	CATG	7 cut(s)	791, 851, 1042, 1153, 1211, 1231, 1996
CviQI	GTAC	6 cut(s)	136, 409, 574, 993, 1007, 1100
DinI	GGCGCC	1 cut(s)	1715
EaeI	YGGCCR	3 cut(s)	642, 1620, 1698
EagI	CGGCCG	1 cut(s)	1698
EclXI	CGGCCG	1 cut(s)	1698
Eco130I	CCWWGG	2 cut(s)	1670, 1995
Eco31I	GGTCTC	1 cut(s)	1844
Eco32I	GATATC	1 cut(s)	303
Eco47I	GGWCC	7 cut(s)	660, 1045, 1058, 1735, 1856, 1980, 2057
Eco52I	CGGCCG	1 cut(s)	1698
Eco57I	CTGAAG	2 cut(s)	531, 820
Eco88I	CYCGRG	1 cut(s)	439
EcoNI	CCTNNNNNAGG	1 cut(s)	1674
EcoO109I	RGGNCCY	2 cut(s)	660, 1980
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	5 cut(s)	177, 1029, 1300, 1381, 2059
EcoRV	GATATC	1 cut(s)	303
EcoT14I	CCWWGG	2 cut(s)	1670, 1995
EgeI	GGCGCC	1 cut(s)	1715
EheI	GGCGCC	1 cut(s)	1715
ErhI	CCWWGG	2 cut(s)	1670, 1995
FaeI	CATG	7 cut(s)	794, 854, 1045, 1156, 1214, 1234, 1999
FaqI	GGGAC	4 cut(s)	94, 673, 1134, 2115
FatI	CATG	7 cut(s)	790, 850, 1041, 1152, 1210, 1230, 1995
FauI	CCCGC	2 cut(s)	1908, 2122
FbaI	TGATCA	2 cut(s)	192, 1455
FblI	GTMKAC	1 cut(s)	2017
FokI	GGATG	6 cut(s)	126, 606, 1579, 1716, 1759, 1810
FspBI	CTAG	5 cut(s)	6, 39, 1550, 1571, 1671
GlaI	GCGC	7 cut(s)	47, 858, 1114, 1649, 1658, 1715, 2029
GsaI	CCCAGC	2 cut(s)	299, 2048
GsuI	CTGGAG	2 cut(s)	734, 1013
HaeII	RGCGCY	1 cut(s)	1717
HaeIII	GGCC	6 cut(s)	644, 1209, 1325, 1488, 1622, 1700
HgaI	GACGC	3 cut(s)	1885, 2080, 2112
HhaI	GCGC	7 cut(s)	48, 859, 1115, 1650, 1659, 1716, 2030
Hin1I	GRCGYC	1 cut(s)	1714
Hin1II	CATG	7 cut(s)	794, 854, 1045, 1156, 1214, 1234, 1999
Hin6I	GCGC	7 cut(s)	46, 857, 1113, 1648, 1657, 1714, 2028
HinP1I	GCGC	7 cut(s)	46, 857, 1113, 1648, 1657, 1714, 2028
HinfI	GANTC	7 cut(s)	32, 142, 242, 499, 745, 1253, 1790
HphI	GGTGA	6 cut(s)	523, 1043, 1303, 1597, 2089, 2144
Hpy166II	GTNNAC	4 cut(s)	136, 411, 574, 2018
Hpy188III	TCNNGA	5 cut(s)	146, 751, 943, 1462, 1824
Hpy8I	GTNNAC	4 cut(s)	136, 411, 574, 2018
Hpy99I	CGWCG	4 cut(s)	1186, 1441, 1901, 2111
HpyAV	CCTTC	5 cut(s)	79, 863, 1799, 1900, 1984
HpyCH4III	ACNGT	8 cut(s)	565, 674, 906, 922, 1049, 1344, 1926, 2111
HpyCH4IV	ACGT	5 cut(s)	189, 451, 576, 1092, 2136
HpySE526I	ACGT	5 cut(s)	189, 451, 576, 1092, 2136
Hsp92I	GRCGYC	1 cut(s)	1714
Hsp92II	CATG	7 cut(s)	794, 854, 1045, 1156, 1214, 1234, 1999
HspAI	GCGC	7 cut(s)	46, 857, 1113, 1648, 1657, 1714, 2028
KasI	GGCGCC	1 cut(s)	1713
KflI	GGGWCCC	1 cut(s)	660
KpnI	GGTACC	1 cut(s)	996
KroI	GCCGGC	3 cut(s)	1618, 1710, 2181
KroNI	GCCGGC	3 cut(s)	1620, 1712, 2183
Ksp22I	TGATCA	2 cut(s)	192, 1455
LmnI	GCTCC	4 cut(s)	14, 227, 473, 2083
Lsp1109I	GCAGC	7 cut(s)	116, 185, 802, 866, 1712, 1804, 2138
LweI	GCATC	5 cut(s)	160, 437, 1557, 1694, 1829
MaeI	CTAG	5 cut(s)	6, 39, 1550, 1571, 1671
MaeII	ACGT	5 cut(s)	189, 451, 576, 1092, 2136
MaeIII	GTNAC	5 cut(s)	799, 1049, 1419, 1510, 2132
MbiI	CCGCTC	1 cut(s)	2086
MboII	GAAGA	4 cut(s)	505, 517, 520, 947
MfeI	CAATTG	1 cut(s)	468
MflI	RGATCY	7 cut(s)	200, 753, 1826, 1867, 1918, 1991, 2065
MhlI	GDGCHC	2 cut(s)	1227, 1691
MlsI	TGGCCA	1 cut(s)	644
MluNI	TGGCCA	1 cut(s)	644
Mly113I	GGCGCC	1 cut(s)	1714
MlyI	GAGTC	2 cut(s)	236, 1784
MmeI	TCCRAC	6 cut(s)	35, 1216, 1342, 1845, 1856, 1883
Mox20I	TGGCCA	1 cut(s)	644
MreI	CGCCGGCG	1 cut(s)	1710
MroNI	GCCGGC	3 cut(s)	1618, 1710, 2181
MscI	TGGCCA	1 cut(s)	644
MseI	TTAA	5 cut(s)	317, 338, 846, 1265, 1628
MslI	CAYNNNNRTG	2 cut(s)	1316, 2148
Msp20I	TGGCCA	1 cut(s)	644
MspA1I	CMGCKG	2 cut(s)	1725, 2129
MspR9I	CCNGG	8 cut(s)	179, 1031, 1081, 1302, 1383, 1697, 1739, 2061
MunI	CAATTG	1 cut(s)	468
MvaI	CCWGG	5 cut(s)	179, 1031, 1302, 1383, 2061
MvnI	CGCG	6 cut(s)	48, 1648, 1657, 1659, 2030, 2106
NaeI	GCCGGC	3 cut(s)	1620, 1712, 2183
NarI	GGCGCC	1 cut(s)	1714
NciI	CCSGG	3 cut(s)	1081, 1697, 1739
NcoI	CCATGG	1 cut(s)	1995
NgoMIV	GCCGGC	3 cut(s)	1618, 1710, 2181
NheI	GCTAGC	2 cut(s)	5, 38
NlaIII	CATG	7 cut(s)	794, 854, 1045, 1156, 1214, 1234, 1999
NlaIV	GGNNCC	6 cut(s)	229, 661, 662, 994, 1715, 1981
NmeAIII	GCCGAG	1 cut(s)	849
NmuCI	GTSAC	4 cut(s)	799, 1049, 1419, 2132
PaqCI	CACCTGC	1 cut(s)	2105
PdiI	GCCGGC	3 cut(s)	1620, 1712, 2183
PfeI	GAWTC	5 cut(s)	32, 142, 499, 745, 1253
PflMI	CCANNNNNTGG	2 cut(s)	224, 704
PfoI	TCCNGGA	2 cut(s)	1381, 1737
PinAI	ACCGGT	1 cut(s)	1853
PleI	GAGTC	2 cut(s)	236, 1784
PluTI	GGCGCC	1 cut(s)	1717
PpsI	GAGTC	2 cut(s)	236, 1784
PpuMI	RGGWCCY	2 cut(s)	660, 1980
PshAI	GACNNNNGTC	1 cut(s)	2139
Psp5II	RGGWCCY	2 cut(s)	660, 1980
Psp6I	CCWGG	5 cut(s)	177, 1029, 1300, 1381, 2059
PspFI	CCCAGC	2 cut(s)	295, 2044
PspGI	CCWGG	5 cut(s)	177, 1029, 1300, 1381, 2059
PspN4I	GGNNCC	6 cut(s)	229, 661, 662, 994, 1715, 1981
PspPI	GGNCC	8 cut(s)	660, 1045, 1058, 1486, 1735, 1856, 1980, 2057
PspPPI	RGGWCCY	2 cut(s)	660, 1980
PstNI	CAGNNNCTG	1 cut(s)	1165
PsuI	RGATCY	7 cut(s)	200, 753, 1826, 1867, 1918, 1991, 2065
RsaI	GTAC	6 cut(s)	137, 410, 575, 994, 1008, 1101
RsaNI	GTAC	6 cut(s)	136, 409, 574, 993, 1007, 1100
RseI	CAYNNNNRTG	2 cut(s)	1316, 2148
Rsr2I	CGGWCCG	1 cut(s)	1735
RsrII	CGGWCCG	1 cut(s)	1735
SaqAI	TTAA	5 cut(s)	317, 338, 846, 1265, 1628
Sau96I	GGNCC	8 cut(s)	660, 1045, 1058, 1486, 1735, 1856, 1980, 2057
SchI	GAGTC	2 cut(s)	236, 1784
ScrFI	CCNGG	8 cut(s)	179, 1031, 1081, 1302, 1383, 1697, 1739, 2061
SduI	GDGCHC	2 cut(s)	1227, 1691
SfaNI	GCATC	5 cut(s)	160, 437, 1557, 1694, 1829
SfcI	CTRYAG	1 cut(s)	561
SfoI	GGCGCC	1 cut(s)	1715
SgrAI	CRCCGGYG	1 cut(s)	1710
SinI	GGWCC	7 cut(s)	660, 1045, 1058, 1735, 1856, 1980, 2057
SmiMI	CAYNNNNRTG	2 cut(s)	1316, 2148
SspDI	GGCGCC	1 cut(s)	1713
SspMI	CTAG	5 cut(s)	6, 39, 1550, 1571, 1671
StyD4I	CCNGG	8 cut(s)	177, 1029, 1079, 1300, 1381, 1695, 1737, 2059
StyI	CCWWGG	2 cut(s)	1670, 1995
TaaI	ACNGT	8 cut(s)	565, 674, 906, 922, 1049, 1344, 1926, 2111
TaiI	ACGT	5 cut(s)	192, 454, 579, 1095, 2139
TaqI	TCGA	5 cut(s)	431, 1436, 1494, 1681, 1950
TaqII	GACCGA	2 cut(s)	1046, 1889
TatI	WGTACW	3 cut(s)	408, 1006, 1099
TauI	GCSGC	7 cut(s)	447, 688, 1710, 1725, 1767, 2089, 2188
TfiI	GAWTC	5 cut(s)	32, 142, 499, 745, 1253
Tru1I	TTAA	5 cut(s)	317, 338, 846, 1265, 1628
Tru9I	TTAA	5 cut(s)	317, 338, 846, 1265, 1628
TscAI	CASTG	5 cut(s)	82, 465, 555, 1251, 1428
TseFI	GTSAC	4 cut(s)	799, 1049, 1419, 2132
TseI	GCWGC	8 cut(s)	104, 173, 815, 854, 1725, 1817, 2126, 2188
Tsp45I	GTSAC	4 cut(s)	799, 1049, 1419, 2132
TspDTI	ATGAA	7 cut(s)	61, 274, 324, 691, 780, 1364, 1440
TspGWI	ACGGA	3 cut(s)	757, 1170, 2035
TspRI	CASTG	5 cut(s)	82, 465, 555, 1251, 1428
Van91I	CCANNNNNTGG	2 cut(s)	224, 704
VpaK11BI	GGWCC	7 cut(s)	660, 1045, 1058, 1735, 1856, 1980, 2057
XagI	CCTNNNNNAGG	1 cut(s)	1674
XapI	RAATTY	3 cut(s)	149, 957, 1409
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1298
XmaJI	CCTAGG	1 cut(s)	1670
XmiI	GTMKAC	1 cut(s)	2017
XspI	CTAG	5 cut(s)	6, 39, 1550, 1571, 1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.