Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000296

Physical Location & Seq

Genomic Coordinates Forward (+)

23513065 .. 23515977

Gene Structure 2913 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00019280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGAGAATGGTTCCCTCTCCCACACCGGTGAATCCCAAATCATATCATCTGATTCCAGTAGCAGACGCGGTGGTTGGATCACTTTCCCCTTCATCATCGGGGCTATAATAGGCTTATCACTTGCAGTGGGAGGATGGCTCTCAAATTTGATAGTGTTTCTGATTCAAGAATTCAATGTGAAGAGTATTGATGCTGCTCAGATTGCAAACGTGGTTAACGGTTCTTCCTGCTTTTTCCCAGTCATTGGAGCAATTATATCAGACTCTTTCTTTGGCCCTTTCTTGGTCATCTCCATTTCTTCCTGCATTTCCTTGCTGGGTATTGTTTTTTTGGCATTAACTGCTACATTCGATTCGTTAAAGCCTCAATCTTGTGTAATCGGATCAGAAATTTGCCAGCCAACCTCAACTCTGCAATATACAATCTTGTATACGGGTATAGCTTTGGCATCAATTGGCTTGGGAGGTACACGCTTTACCCTAGCAACAATGGGAGCTAATCAATTGGATAAGCCTAAAAATCAAGCAACTTTCTTTAACTGGTATTTCATTGGCATATACTTTGCTTCAACCGTAGCTCTAACTGTCATCGTGTACATAGAGGACAATGTGGGTTTTTCATGGGGTTTTGGCCTAGCTGTTGCTGGCAATGTTATTGGCTTGGCCATTTTCTTATCTGGAACCCGTTTCTACCATTTTAATAAGCCTCAAGGGAGTCCATTTGTGGGTTTAGCTCGTGTCATTGTTGCTACTACCTGGAAAAGGAATCTCCAACTCTCATCTGAAAGCAACGATTATTGTTACTATGGGCATGAGGGAGTCACCAACAGGGTGGCTACAAAACCAAGCAGGAGCTTCAGTTTCCTTAACCGTGCAGCACAGAAAGCTGAAGGAGACATCAAACCAGACGGGACAATTGCAAAGCCATGGAGATTATGCACAGTTCAACAAGTAGAAGATTTCAAGACCCTTATAAGAATAATGCCATTATGGTCAACAACCATATTCTTAAGTACCCCAATTGGAATCCAAGGCAGCTTGACTATCTTGCAGGCTCTAACCATGGACCGTCACCTAGGGCCTCATTTTCAAATACCAGCTGGGTCTGTTGTAGCCGTCATTCTAATTTCCGGTGTCATCTTTCTCGCCCTCATTGATAGGTTATTATGTCCCATGTGGAAGAAGTTAACTGGTCATTTTCCGACACCCCTCCAACGTATAGGATTAGGCCACGTGCTAAGCGTGTTCGCCATGGCAGTTTCAGCACTGGTAGAGTCTAAAAGGCTTAAATTTTCCCAAGACCATCCTGGTGCAACTACTGTCCCCATGTTGGCATTGTGGCTCTTCCCACAATTGGTTTTGGTTGGCGCTGGAGAGGCATTTCATTTTCCAGGACAAGTTTCTTTGTATTACCAAGAATTTCCTTCGTCGCTGAAAACCACAGCAACAGCGATGATCTCGTTGGTTATCGGGATTGCATTTTATTTAGGGACAGGTTTGATTAATCTGGTTCAGAGGGTTACAAGATGGCTACCAGACAACATAAACAATGGGAAGCTAGAGAATGTGTATTGGATGCTAGTTGTAATTGGAGTGGTAAACTTTGGTTATTATTTAGTCTGTGCCAAGTTGTACAAGTATCAAAATGTACAGGATACAGATGATAGTTTGGAATCTGATAAGAAGAAGTGTTGTTTTTATTTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009268 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009651 GO:0009987 GO:0010447 GO:0010542 GO:0015075 GO:0015103 GO:0015108 GO:0015112 GO:0015291 GO:0015318 GO:0015513 GO:0015562 GO:0015698 GO:0015706 GO:0016020 GO:0022804 GO:0022857 GO:0033554 GO:0034220 GO:0042221 GO:0043207 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0070887 GO:0071214 GO:0071470 GO:0071472 GO:0071705 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0104004 GO:1902074 GO:1902075 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

569

Amino Acids

62.29

Weight (kDa)

8.78

Isoelectric Point (pI)

34.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	95 - 509	4e-69	POT family
MFS_1	PF07690	140 - 497	3.4e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45650 AT3G45650 AT3G45660 AT3G45660 AT3G45660 AT3G45680 AT3G45690 AT3G45700 AT3G45710 AT3G45720
fragaria_vesca	FvH4_3g33820 FvH4_3g33850 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g33880 FvH4_3g45870 FvH4_7g20320 FvH4_7g20340 FvH4_7g20350 FvH4_7g20350
malus_domestica	MD01G1112600.v1.1 MD03G1108700.v1.1 MD03G1108900.v1.1 MD03G1109100.v1.1 MD03G1109300.v1.1 MD07G1180500.v1.1 MD11G1121600.v1.1 MD11G1122000.v1.1 MD11G1122200.v1.1 MD11G1122300.v1.1 MD11G1122500.v1.1
prunus_persica	Prupe.2G219800_v2.0.a1 Prupe.2G219800_v2.0.a1 Prupe.2G219900_v2.0.a1 Prupe.3G138100_v2.0.a1 Prupe.4G208900_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091800_v2.0.a1 Prupe.6G091900_v2.0.a1
pyrus_communis	pycom01g14110 pycom03g08880 pycom03g08900 pycom03g08910 pycom07g17370 pycom11g10350 pycom11g10360
rosa_chinensis	RchiOBHm_Chr1g0364271 RchiOBHm_Chr1g0364281 RchiOBHm_Chr1g0364291 RchiOBHm_Chr1g0364311 RchiOBHm_Chr5g0061391 RchiOBHm_Chr5g0061441
rosa_laevigata	RLG00000014217 RLG00000027496 RLG00000027497 RLG00000027498 RLG00000035463 RLG00000035473 RLG00000035475 RLG00000035477
rosa_multiflora	Rmu_co8497605.1_g000001 Rmu_sc0000671.1_g000002 Rmu_sc0003643.1_g000004 Rmu_sc0006608.1_g000010 Rmu_sc0006640.1_g000001 Rmu_sc0007470.1_g000001 Rmu_sc0015455.1_g000001 Rmu_sc0024335.1_g000001 Rmu_sc0031872.1_g000001 Rmu_sc0035434.1_g000001 Rmu_sc0035434.1_g000002
rosa_roxburghii	Rroxscaffold_1G00019240 Rroxscaffold_1G00019270 Rroxscaffold_1G00019280 Rroxscaffold_4G00292440 Rroxscaffold_4G00292450 Rroxscaffold_4G00292460 Rroxscaffold_4G00292470
rosa_rugosa	Rorug01G0315400 Rorug01G0315400 Rorug05G0340000 Rorug05G0340100 Rorug05G0340200 Rorug05G0340300
rosa_samantha	Rh1AG322600 Rh1AG322700 Rh1AG322800 Rh1AG322900 Rh1AG323000 Rh1BG285500 Rh1BG285600 Rh1CG302100 Rh1CG302200 Rh1CG302300 Rh1DG317000 Rh1DG317100 Rh5AG402200 Rh5AG402300 Rh5AG402400 Rh5AG402600 Rh5BG414600 Rh5BG414700 Rh5BG414900 Rh5BG415100 Rh5CG439300 Rh5CG439400 Rh5CG439600 Rh5CG439800 Rh5DG429100 Rh5DG429500 Rh5DG429700
rosa_wichuraiana	Rw1G028580 Rw1G028610 Rw1G028620 Rw5G037740 Rw5G037860 Rw5G037870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	974
AccB7I	CCANNNNNTGG	1 cut(s)	245
AccI	GTMKAC	1 cut(s)	431
AccII	CGCG	1 cut(s)	69
AciI	CCGC	1 cut(s)	69
AclWI	GGATC	2 cut(s)	86, 391
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	5 cut(s)	145, 170, 390, 1289, 1418
AcuI	CTGAAG	2 cut(s)	841, 909
AcvI	CACGTG	1 cut(s)	1234
AfaI	GTAC	5 cut(s)	469, 596, 1015, 1634, 1650
AfiI	CCNNNNNNNGG	6 cut(s)	245, 283, 725, 762, 1330, 1354
AflII	CTTAAG	1 cut(s)	1009
AgeI	ACCGGT	1 cut(s)	26
AgsI	TTSAA	6 cut(s)	167, 175, 570, 947, 964, 1091
AjnI	CCWGG	3 cut(s)	755, 1306, 1390
AleI	CACNNNNGTG	1 cut(s)	27
Alw26I	GTCTC	1 cut(s)	888
AlwI	GGATC	2 cut(s)	86, 391
AoxI	GGCC	5 cut(s)	274, 631, 663, 1079, 1228
ApeKI	GCWGC	3 cut(s)	194, 875, 1035
ApoI	RAATTY	5 cut(s)	145, 170, 390, 1289, 1418
ArsI	GACNNNNNNTTYG	2 cut(s)	254, 286
AseI	ATTAAT	1 cut(s)	1503
AsiGI	ACCGGT	1 cut(s)	26
AspA2I	CCTAGG	1 cut(s)	1075
AspLEI	GCGC	1 cut(s)	1370
AspS9I	GGNCC	3 cut(s)	275, 1066, 1079
AsuHPI	GGTGA	3 cut(s)	41, 814, 1064
AvaII	GGWCC	1 cut(s)	1066
AvrII	CCTAGG	1 cut(s)	1075
BalI	TGGCCA	1 cut(s)	665
BauI	CACGAG	1 cut(s)	735
BbrPI	CACGTG	1 cut(s)	1234
BbvI	GCAGC	3 cut(s)	181, 887, 1047
BccI	CCATC	3 cut(s)	129, 1311, 1521
BceAI	ACGGC	1 cut(s)	1100
BciT130I	CCWGG	3 cut(s)	757, 1308, 1392
BciVI	GTATCC	1 cut(s)	1648
BcoDI	GTCTC	1 cut(s)	888
BfaI	CTAG	5 cut(s)	482, 635, 1076, 1559, 1580
BfoI	RGCGCY	1 cut(s)	1371
BfrI	CTTAAG	1 cut(s)	1009
BfuI	GTATCC	1 cut(s)	1648
BisI	GCNGC	3 cut(s)	195, 876, 1036
BlnI	CCTAGG	1 cut(s)	1075
BlpI	GCTNAGC	1 cut(s)	1238
BlsI	GCNGC	3 cut(s)	196, 877, 1037
Bme1390I	CCNGG	3 cut(s)	757, 1308, 1392
Bme18I	GGWCC	1 cut(s)	1066
BmgT120I	GGNCC	3 cut(s)	275, 1066, 1079
BmiI	GGNNCC	2 cut(s)	13, 682
BmrFI	CCNGG	3 cut(s)	757, 1308, 1392
BmrI	ACTGGG	1 cut(s)	233
BmsI	GCATC	3 cut(s)	181, 458, 1566
BmuI	ACTGGG	1 cut(s)	233
BplI	GAGNNNNNCTC	2 cut(s)	123, 155
BpmI	CTGGAG	1 cut(s)	1392
Bpu1102I	GCTNAGC	1 cut(s)	1238
BpuEI	CTTGAG	1 cut(s)	693
BsaAI	YACGTR	1 cut(s)	1234
BsaJI	CCNNGG	5 cut(s)	926, 1030, 1062, 1075, 1251
BsaWI	WCCGGW	2 cut(s)	26, 1130
BsaXI	ACNNNNNCTCC	2 cut(s)	844, 874
Bsc4I	CCNNNNNNNGG	6 cut(s)	245, 283, 725, 762, 1330, 1354
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	5 cut(s)	57, 239, 545, 1195, 1272
Bse3DI	GCAATG	1 cut(s)	655
BseBI	CCWGG	3 cut(s)	757, 1308, 1392
BseDI	CCNNGG	5 cut(s)	926, 1030, 1062, 1075, 1251
BseGI	GGATG	3 cut(s)	140, 1303, 1581
BseLI	CCNNNNNNNGG	6 cut(s)	245, 283, 725, 762, 1330, 1354
BseMI	GCAATG	1 cut(s)	655
BseMII	CTCAG	1 cut(s)	212
BseNI	ACTGG	5 cut(s)	57, 239, 545, 1195, 1272
BseXI	GCAGC	3 cut(s)	181, 887, 1047
BseYI	CCCAGC	2 cut(s)	316, 1100
BsgI	GTGCAG	1 cut(s)	894
Bsh1236I	CGCG	1 cut(s)	69
BshFI	GGCC	5 cut(s)	276, 633, 665, 1081, 1230
BshTI	ACCGGT	1 cut(s)	26
BsiSI	CCGG	2 cut(s)	27, 1131
BslFI	GGGAC	4 cut(s)	925, 1155, 1307, 1504
BslI	CCNNNNNNNGG	6 cut(s)	245, 283, 725, 762, 1330, 1354
BsmAI	GTCTC	1 cut(s)	888
BsmFI	GGGAC	4 cut(s)	925, 1155, 1307, 1504
BsnI	GGCC	5 cut(s)	276, 633, 665, 1081, 1230
Bsp1407I	TGTACA	3 cut(s)	594, 1632, 1648
Bsp143I	GATC	3 cut(s)	78, 383, 1455
Bsp1720I	GCTNAGC	1 cut(s)	1238
Bsp19I	CCATGG	3 cut(s)	926, 1062, 1251
BspACI	CCGC	1 cut(s)	69
BspANI	GGCC	5 cut(s)	276, 633, 665, 1081, 1230
BspCNI	CTCAG	1 cut(s)	211
BspFNI	CGCG	1 cut(s)	69
BspLI	GGNNCC	2 cut(s)	13, 682
BspPI	GGATC	2 cut(s)	86, 391
BspQI	GCTCTTC	1 cut(s)	1349
BspTI	CTTAAG	1 cut(s)	1009
BsrDI	GCAATG	1 cut(s)	655
BsrFI	RCCGGY	1 cut(s)	26
BsrGI	TGTACA	3 cut(s)	594, 1632, 1648
BsrI	ACTGG	5 cut(s)	57, 239, 545, 1195, 1272
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	5 cut(s)	926, 1030, 1062, 1075, 1251
BssMI	GATC	3 cut(s)	78, 383, 1455
BssNAI	GTATAC	1 cut(s)	432
BssSI	CACGAG	1 cut(s)	735
BssT1I	CCWWGG	5 cut(s)	926, 1030, 1062, 1075, 1251
Bst1107I	GTATAC	1 cut(s)	432
Bst2BI	CACGAG	1 cut(s)	735
Bst2UI	CCWGG	3 cut(s)	757, 1308, 1392
Bst4CI	ACNGT	7 cut(s)	221, 574, 586, 872, 943, 1070, 1321
Bst6I	CTCTTC	2 cut(s)	176, 1349
BstAFI	CTTAAG	1 cut(s)	1009
BstAPI	GCANNNNNTGC	1 cut(s)	341
BstAUI	TGTACA	3 cut(s)	594, 1632, 1648
BstBAI	YACGTR	1 cut(s)	1234
BstC8I	GCNNGC	3 cut(s)	398, 646, 1053
BstDEI	CTNAG	2 cut(s)	198, 1238
BstDSI	CCRYGG	3 cut(s)	926, 1062, 1251
BstENI	CCTNNNNNAGG	1 cut(s)	760
BstF5I	GGATG	3 cut(s)	140, 1303, 1581
BstFNI	CGCG	1 cut(s)	69
BstH2I	RGCGCY	1 cut(s)	1371
BstHHI	GCGC	1 cut(s)	1370
BstKTI	GATC	3 cut(s)	81, 386, 1458
BstMAI	GTCTC	1 cut(s)	888
BstMBI	GATC	3 cut(s)	78, 383, 1455
BstMWI	GCNNNNNNNGC	5 cut(s)	203, 341, 884, 1262, 1376
BstNI	CCWGG	3 cut(s)	757, 1308, 1392
BstSCI	CCNGG	3 cut(s)	755, 1306, 1390
BstUI	CGCG	1 cut(s)	69
BstV1I	GCAGC	3 cut(s)	181, 887, 1047
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstZ17I	GTATAC	1 cut(s)	432
BsuI	GTATCC	1 cut(s)	1648
BsuRI	GGCC	5 cut(s)	276, 633, 665, 1081, 1230
BtgI	CCRYGG	3 cut(s)	926, 1062, 1251
BtgZI	GCGATG	1 cut(s)	1466
BtsCI	GGATG	3 cut(s)	140, 1303, 1581
BtsI	GCAGTG	1 cut(s)	132
BtsIMutI	CAGTG	2 cut(s)	132, 1265
Cac8I	GCNNGC	3 cut(s)	398, 646, 1053
CfoI	GCGC	1 cut(s)	1370
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	3 cut(s)	275, 1066, 1079
CseI	GACGC	1 cut(s)	75
Csp6I	GTAC	5 cut(s)	468, 595, 1014, 1633, 1649
CspAI	ACCGGT	1 cut(s)	26
CviAII	CATG	7 cut(s)	621, 812, 927, 1063, 1174, 1252, 1327
CviQI	GTAC	5 cut(s)	468, 595, 1014, 1633, 1649
DdeI	CTNAG	2 cut(s)	198, 1238
DpnI	GATC	3 cut(s)	80, 385, 1457
DpnII	GATC	3 cut(s)	78, 383, 1455
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	2 cut(s)	176, 1349
EarI	CTCTTC	2 cut(s)	176, 1349
Eco130I	CCWWGG	5 cut(s)	926, 1030, 1062, 1075, 1251
Eco47I	GGWCC	1 cut(s)	1066
Eco57I	CTGAAG	2 cut(s)	841, 909
Eco72I	CACGTG	1 cut(s)	1234
EcoNI	CCTNNNNNAGG	1 cut(s)	760
EcoO109I	RGGNCCY	1 cut(s)	1079
EcoRI	GAATTC	1 cut(s)	170
EcoRII	CCWGG	3 cut(s)	755, 1306, 1390
EcoT14I	CCWWGG	5 cut(s)	926, 1030, 1062, 1075, 1251
ErhI	CCWWGG	5 cut(s)	926, 1030, 1062, 1075, 1251
FaeI	CATG	7 cut(s)	624, 815, 930, 1066, 1177, 1255, 1330
FaqI	GGGAC	4 cut(s)	925, 1155, 1307, 1504
FatI	CATG	7 cut(s)	620, 811, 926, 1062, 1173, 1251, 1326
FblI	GTMKAC	1 cut(s)	431
Fnu4HI	GCNGC	3 cut(s)	195, 876, 1036
FokI	GGATG	3 cut(s)	147, 1290, 1588
Fsp4HI	GCNGC	3 cut(s)	195, 876, 1036
FspBI	CTAG	5 cut(s)	482, 635, 1076, 1559, 1580
GlaI	GCGC	1 cut(s)	1369
GluI	GCNGC	3 cut(s)	195, 876, 1036
GsaI	CCCAGC	2 cut(s)	320, 1104
GsuI	CTGGAG	1 cut(s)	1392
HaeII	RGCGCY	1 cut(s)	1371
HaeIII	GGCC	5 cut(s)	276, 633, 665, 1081, 1230
HapII	CCGG	2 cut(s)	27, 1131
HgaI	GACGC	1 cut(s)	75
HhaI	GCGC	1 cut(s)	1370
Hin1II	CATG	7 cut(s)	624, 815, 930, 1066, 1177, 1255, 1330
Hin6I	GCGC	1 cut(s)	1368
HinP1I	GCGC	1 cut(s)	1368
HincII	GTYRAC	3 cut(s)	217, 996, 1188
HindII	GTYRAC	3 cut(s)	217, 996, 1188
HpaI	GTTAAC	2 cut(s)	217, 1188
HpaII	CCGG	2 cut(s)	27, 1131
HphI	GGTGA	3 cut(s)	41, 814, 1064
Hpy166II	GTNNAC	7 cut(s)	217, 432, 470, 595, 996, 1188, 1600
Hpy188III	TCNNGA	4 cut(s)	167, 678, 964, 1471
Hpy8I	GTNNAC	7 cut(s)	217, 432, 470, 595, 996, 1188, 1600
Hpy99I	CGWCG	1 cut(s)	1432
HpyAV	CCTTC	3 cut(s)	100, 884, 1434
HpyCH4III	ACNGT	7 cut(s)	221, 574, 586, 872, 943, 1070, 1321
HpyCH4IV	ACGT	3 cut(s)	210, 1216, 1233
HpyF10VI	GCNNNNNNNGC	5 cut(s)	203, 341, 884, 1262, 1376
HpyF3I	CTNAG	2 cut(s)	198, 1238
HpySE526I	ACGT	3 cut(s)	210, 1216, 1233
Hsp92II	CATG	7 cut(s)	624, 815, 930, 1066, 1177, 1255, 1330
HspAI	GCGC	1 cut(s)	1368
KspAI	GTTAAC	2 cut(s)	217, 1188
Kzo9I	GATC	3 cut(s)	78, 383, 1455
LguI	GCTCTTC	1 cut(s)	1349
LmnI	GCTCC	3 cut(s)	248, 494, 852
Lsp1109I	GCAGC	3 cut(s)	181, 887, 1047
LweI	GCATC	3 cut(s)	181, 458, 1566
MaeI	CTAG	5 cut(s)	482, 635, 1076, 1559, 1580
MaeII	ACGT	3 cut(s)	210, 1216, 1233
MaeIII	GTNAC	4 cut(s)	800, 820, 1070, 1519
MalI	GATC	3 cut(s)	80, 385, 1457
MboI	GATC	3 cut(s)	78, 383, 1455
MboII	GAAGA	7 cut(s)	193, 216, 291, 968, 1192, 1336, 1696
MfeI	CAATTG	5 cut(s)	453, 503, 915, 1020, 1352
MlsI	TGGCCA	1 cut(s)	665
MluNI	TGGCCA	1 cut(s)	665
MlyI	GAGTC	4 cut(s)	257, 724, 828, 1283
MmeI	TCCRAC	4 cut(s)	56, 796, 1226, 1237
Mox20I	TGGCCA	1 cut(s)	665
MscI	TGGCCA	1 cut(s)	665
MslI	CAYNNNNRTG	2 cut(s)	27, 1308
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	1 cut(s)	1100
MspCI	CTTAAG	1 cut(s)	1009
MspI	CCGG	2 cut(s)	27, 1131
MspR9I	CCNGG	3 cut(s)	757, 1308, 1392
MunI	CAATTG	5 cut(s)	453, 503, 915, 1020, 1352
MvaI	CCWGG	3 cut(s)	757, 1308, 1392
MvnI	CGCG	1 cut(s)	69
MwoI	GCNNNNNNNGC	5 cut(s)	203, 341, 884, 1262, 1376
NcoI	CCATGG	3 cut(s)	926, 1062, 1251
NdeII	GATC	3 cut(s)	78, 383, 1455
NlaIII	CATG	7 cut(s)	624, 815, 930, 1066, 1177, 1255, 1330
NlaIV	GGNNCC	2 cut(s)	13, 682
NmuCI	GTSAC	2 cut(s)	820, 1070
OliI	CACNNNNGTG	1 cut(s)	27
PciSI	GCTCTTC	1 cut(s)	1349
PcsI	WCGNNNNNNNCGW	1 cut(s)	1239
PfeI	GAWTC	7 cut(s)	32, 53, 163, 353, 766, 1026, 1673
PflMI	CCANNNNNTGG	1 cut(s)	245
PfoI	TCCNGGA	1 cut(s)	1390
PinAI	ACCGGT	1 cut(s)	26
PkrI	GCNGC	3 cut(s)	196, 877, 1037
PleI	GAGTC	4 cut(s)	257, 723, 827, 1282
PmaCI	CACGTG	1 cut(s)	1234
PmlI	CACGTG	1 cut(s)	1234
PpsI	GAGTC	4 cut(s)	257, 723, 827, 1282
Ppu21I	YACGTR	1 cut(s)	1234
PshBI	ATTAAT	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	974
Psp6I	CCWGG	3 cut(s)	755, 1306, 1390
PspCI	CACGTG	1 cut(s)	1234
PspFI	CCCAGC	2 cut(s)	316, 1100
PspGI	CCWGG	3 cut(s)	755, 1306, 1390
PspN4I	GGNNCC	2 cut(s)	13, 682
PspPI	GGNCC	3 cut(s)	275, 1066, 1079
PvuII	CAGCTG	1 cut(s)	1100
RsaI	GTAC	5 cut(s)	469, 596, 1015, 1634, 1650
RsaNI	GTAC	5 cut(s)	468, 595, 1014, 1633, 1649
RseI	CAYNNNNRTG	2 cut(s)	27, 1308
SapI	GCTCTTC	1 cut(s)	1349
SatI	GCNGC	3 cut(s)	195, 876, 1036
Sau3AI	GATC	3 cut(s)	78, 383, 1455
Sau96I	GGNCC	3 cut(s)	275, 1066, 1079
SchI	GAGTC	4 cut(s)	257, 724, 828, 1283
ScrFI	CCNGG	3 cut(s)	757, 1308, 1392
SfaNI	GCATC	3 cut(s)	181, 458, 1566
SgrAI	CRCCGGYG	1 cut(s)	26
SinI	GGWCC	1 cut(s)	1066
SmiMI	CAYNNNNRTG	2 cut(s)	27, 1308
SmlI	CTYRAG	2 cut(s)	708, 1009
SmoI	CTYRAG	2 cut(s)	708, 1009
SsiI	CCGC	1 cut(s)	69
SspMI	CTAG	5 cut(s)	482, 635, 1076, 1559, 1580
StyD4I	CCNGG	3 cut(s)	755, 1306, 1390
StyI	CCWWGG	5 cut(s)	926, 1030, 1062, 1075, 1251
TaaI	ACNGT	7 cut(s)	221, 574, 586, 872, 943, 1070, 1321
TaiI	ACGT	3 cut(s)	213, 1219, 1236
TaqI	TCGA	1 cut(s)	351
TatI	WGTACW	3 cut(s)	594, 1632, 1648
TfiI	GAWTC	7 cut(s)	32, 53, 163, 353, 766, 1026, 1673
TscAI	CASTG	2 cut(s)	132, 1272
TseFI	GTSAC	2 cut(s)	820, 1070
TseI	GCWGC	3 cut(s)	194, 875, 1035
Tsp45I	GTSAC	2 cut(s)	820, 1070
TspDTI	ATGAA	4 cut(s)	82, 538, 609, 1373
TspRI	CASTG	2 cut(s)	132, 1272
Van91I	CCANNNNNTGG	1 cut(s)	245
Vha464I	CTTAAG	1 cut(s)	1009
VpaK11BI	GGWCC	1 cut(s)	1066
VspI	ATTAAT	1 cut(s)	1503
XagI	CCTNNNNNAGG	1 cut(s)	760
XapI	RAATTY	5 cut(s)	145, 170, 390, 1289, 1418
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XmaJI	CCTAGG	1 cut(s)	1075
XmiI	GTMKAC	1 cut(s)	431
XspI	CTAG	5 cut(s)	482, 635, 1076, 1559, 1580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.