MD09G1024500.v1.1

Altered inheritance of mitochondria protein 32-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0001205
Physical Location & Seq
Reverse (-)
1472526 .. 1476326
3801 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1024500.v1.1.491

Sequence Viewer

Length: 1026 bp
ATGTCATATGAGTCTGATGAAGACACTAAGGACGATACGCAGTTGAGCAATCGCCAAGTTTTCCTCTGCTACAAGACCCCCGAGGCTTGGCCATGGCGCATCAAAGGCTCTGAGTCCGATCCACTCCCTAAGTTCTTTGCATCCGCTCTCAAAGCTCGCAAGAACGACATCACCGTTAAGACGTTGCTGACAGTAATTGAAGGACGCGAAGGAACTGAGTTTTCCAATGGCGATGTGTTGATTTTCCCACAAATGATCAAATACAGGGGTTTGAAAGAGTCGGATGTGGACAACTTTGTTGATGATGTCCTTGTGAATGACAAGCCATGGGCTTCCAGAGTGCAAGAGCCGTTGACTGGCTCCCATGTATTTGTATGTGCACAAGGTAGTCGAGAGGAATGGAATCATGATAGTGCACGTGTTCTCATTTATAAGTTCAAAGAGGAGGTTGAGCTGCGAGGATTGACGAATCAGGTATTTGTTGCTGCTTGCTTTCACACTGGAGGCCACAATGGAAACATGATTATCTATAGCTCAGGTTCAGATGGAAGCATAACAGGCCATTGGTATGGCGACGTCACTCCTGATGATGTGCCGGAATTGCTTGATGAGCATATTGGGAAGGGAAAGATTATAAAACGACTGTGGAGGGGCCAAATGGGAGCATCTTCTGATGAAGCTGAAGAAATCAATGACCGGGAGCTTCCAAATGGAGAAGAAAATAAGAAAATTGAGGAGAAGCCACAAGAAAATGGCAATCAGATTCACCAAGAAAAGGGCAATCAAATTGAGAATAATGAGAACTTTTCAGGTTGTTGCCAGGGTGCTAATAGTGATGGATTTACATGTTGCGAAGAAGTAAGTTTGGAGGAGAACGGTGGAAGTGAGGAAAAAAAGCCGAAAGAAACCAGGGAGTCGTGTGCCAGGAAGGATGCCTTACGGAAGCTGTCAAGCTTGATTGGAGCAGTGGCAATAGTAGTTGTGGCCTATTGCTTTTATAGAAGGTTAGGCAGAAAAGTACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Suc_Fer-like

Protein Analysis

342

Amino Acids

38.32

Weight (kDa)

5.08

Isoelectric Point (pI)

31.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suc_Fer-like PF06999 17 - 218 5e-27 Sucrase/ferredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 432, 635
AatII GACGTC 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 146
AccII CGCG 1 cut(s) 207
AciI CCGC 1 cut(s) 144
AclWI GGATC 1 cut(s) 113
AcoI YGGCCR 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 702
AcvI CACGTG 1 cut(s) 419
AcyI GRCGYC 1 cut(s) 576
AfaI GTAC 1 cut(s) 1020
AfiI CCNNNNNNNGG 3 cut(s) 87, 356, 775
AflIII ACRYGT 2 cut(s) 418, 845
AgsI TTSAA 3 cut(s) 200, 274, 439
AjnI CCWGG 3 cut(s) 819, 908, 923
AluBI AGCT 7 cut(s) 155, 454, 534, 680, 703, 946, 954
AluI AGCT 7 cut(s) 155, 454, 534, 680, 703, 946, 954
Alw21I GWGCWC 2 cut(s) 382, 418
Alw44I GTGCAC 2 cut(s) 378, 414
AlwI GGATC 1 cut(s) 113
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 5 cut(s) 89, 505, 559, 652, 984
ApaLI GTGCAC 2 cut(s) 378, 414
ApeKI GCWGC 2 cut(s) 454, 485
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 1 cut(s) 652
AsuC2I CCSGG 1 cut(s) 698
AsuHPI GGTGA 2 cut(s) 163, 758
AvaI CYCGRG 1 cut(s) 80
BaeGI GKGCMC 2 cut(s) 382, 418
BalI TGGCCA 1 cut(s) 91
BbrPI CACGTG 1 cut(s) 419
BbsI GAAGAC 1 cut(s) 27
Bbv12I GWGCWC 2 cut(s) 382, 418
BbvI GCAGC 2 cut(s) 441, 472
BccI CCATC 2 cut(s) 539, 830
BceAI ACGGC 1 cut(s) 334
BciT130I CCWGG 3 cut(s) 821, 910, 925
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 1 cut(s) 698
BfmI CTRYAG 1 cut(s) 529
BisI GCNGC 2 cut(s) 455, 486
BlsI GCNGC 2 cut(s) 456, 487
BmcAI AGTACT 1 cut(s) 1020
Bme1390I CCNGG 4 cut(s) 698, 821, 910, 925
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 652
BmiI GGNNCC 2 cut(s) 361, 653
BmrFI CCNGG 4 cut(s) 698, 821, 910, 925
BmsI GCATC 4 cut(s) 108, 149, 674, 922
BpiI GAAGAC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 522
Bpu10I CCTNAGC 1 cut(s) 535
BpuMI CCSGG 1 cut(s) 698
BsaAI YACGTR 1 cut(s) 419
BsaHI GRCGYC 1 cut(s) 576
BsaJI CCNNGG 5 cut(s) 81, 92, 326, 820, 909
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 356, 775
Bse1I ACTGG 2 cut(s) 361, 505
BseBI CCWGG 3 cut(s) 821, 910, 925
BseDI CCNNGG 5 cut(s) 81, 92, 326, 820, 909
BseGI GGATG 3 cut(s) 140, 289, 937
BseLI CCNNNNNNNGG 3 cut(s) 87, 356, 775
BseMII CTCAG 3 cut(s) 102, 207, 549
BseNI ACTGG 2 cut(s) 361, 505
BseRI GAGGAG 3 cut(s) 458, 749, 884
BseSI GKGCMC 2 cut(s) 382, 418
BseXI GCAGC 2 cut(s) 441, 472
Bsh1236I CGCG 1 cut(s) 207
BshFI GGCC 5 cut(s) 91, 507, 561, 654, 986
BsiHKAI GWGCWC 2 cut(s) 382, 418
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 2 cut(s) 596, 697
BslI CCNNNNNNNGG 3 cut(s) 87, 356, 775
BsnI GGCC 5 cut(s) 91, 507, 561, 654, 986
BsoBI CYCGRG 1 cut(s) 80
Bsp1286I GDGCHC 2 cut(s) 382, 418
Bsp143I GATC 2 cut(s) 118, 255
Bsp19I CCATGG 2 cut(s) 92, 326
BspACI CCGC 1 cut(s) 144
BspANI GGCC 5 cut(s) 91, 507, 561, 654, 986
BspCNI CTCAG 3 cut(s) 103, 208, 548
BspFNI CGCG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 406
BspLI GGNNCC 2 cut(s) 361, 653
BspPI GGATC 1 cut(s) 113
BsrBI CCGCTC 1 cut(s) 146
BsrI ACTGG 2 cut(s) 361, 505
BssECI CCNNGG 5 cut(s) 81, 92, 326, 820, 909
BssMI GATC 2 cut(s) 118, 255
BssNI GRCGYC 1 cut(s) 576
BssT1I CCWWGG 2 cut(s) 92, 326
Bst2UI CCWGG 3 cut(s) 821, 910, 925
Bst4CI ACNGT 4 cut(s) 175, 193, 645, 878
BstACI GRCGYC 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 419
BstC8I GCNNGC 2 cut(s) 157, 490
BstDEI CTNAG 5 cut(s) 27, 111, 129, 216, 535
BstDSI CCRYGG 2 cut(s) 92, 326
BstF5I GGATG 3 cut(s) 140, 289, 937
BstFNI CGCG 1 cut(s) 207
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 2 cut(s) 121, 258
BstMBI GATC 2 cut(s) 118, 255
BstMWI GCNNNNNNNGC 5 cut(s) 105, 152, 558, 601, 610
BstNI CCWGG 3 cut(s) 821, 910, 925
BstNSI RCATGY 1 cut(s) 849
BstSCI CCNGG 4 cut(s) 696, 819, 908, 923
BstSFI CTRYAG 1 cut(s) 529
BstSLI GKGCMC 2 cut(s) 382, 418
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 2 cut(s) 441, 472
BstV2I GAAGAC 1 cut(s) 27
BstXI CCANNNNNNTGG 1 cut(s) 569
BsuRI GGCC 5 cut(s) 91, 507, 561, 654, 986
BtgI CCRYGG 2 cut(s) 92, 326
BtgZI GCGATG 1 cut(s) 246
BtsCI GGATG 3 cut(s) 140, 289, 937
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 2 cut(s) 498, 972
Cac8I GCNNGC 2 cut(s) 157, 490
CciI TCATGA 1 cut(s) 406
CfoI GCGC 1 cut(s) 99
Cfr13I GGNCC 1 cut(s) 652
CseI GACGC 1 cut(s) 213
Csp6I GTAC 1 cut(s) 1019
CviAII CATG 6 cut(s) 93, 327, 365, 407, 520, 846
CviQI GTAC 1 cut(s) 1019
DdeI CTNAG 5 cut(s) 27, 111, 129, 216, 535
DpnI GATC 2 cut(s) 120, 257
DpnII GATC 2 cut(s) 118, 255
EaeI YGGCCR 1 cut(s) 89
Eco130I CCWWGG 2 cut(s) 92, 326
Eco57I CTGAAG 1 cut(s) 702
Eco72I CACGTG 1 cut(s) 419
Eco88I CYCGRG 1 cut(s) 80
EcoRII CCWGG 3 cut(s) 819, 908, 923
EcoT14I CCWWGG 2 cut(s) 92, 326
ErhI CCWWGG 2 cut(s) 92, 326
FaeI CATG 6 cut(s) 96, 330, 368, 410, 523, 849
FalI AAGNNNNNCTT 2 cut(s) 920, 952
FatI CATG 6 cut(s) 92, 326, 364, 406, 519, 845
FauNDI CATATG 1 cut(s) 7
FbaI TGATCA 1 cut(s) 255
Fnu4HI GCNGC 2 cut(s) 455, 486
FokI GGATG 3 cut(s) 127, 296, 944
Fsp4HI GCNGC 2 cut(s) 455, 486
GlaI GCGC 1 cut(s) 98
GluI GCNGC 2 cut(s) 455, 486
GsuI CTGGAG 1 cut(s) 522
HaeIII GGCC 5 cut(s) 91, 507, 561, 654, 986
HapII CCGG 2 cut(s) 596, 697
HgaI GACGC 1 cut(s) 213
HhaI GCGC 1 cut(s) 99
Hin1I GRCGYC 1 cut(s) 576
Hin1II CATG 6 cut(s) 96, 330, 368, 410, 523, 849
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 354
HindII GTYRAC 1 cut(s) 354
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 7 cut(s) 11, 113, 278, 403, 469, 763, 914
HpaII CCGG 2 cut(s) 596, 697
HphI GGTGA 2 cut(s) 163, 758
Hpy166II GTNNAC 4 cut(s) 289, 354, 380, 416
Hpy188I TCNGA 7 cut(s) 16, 112, 118, 283, 544, 673, 762
Hpy188III TCNNGA 4 cut(s) 336, 392, 407, 584
Hpy8I GTNNAC 4 cut(s) 289, 354, 380, 416
Hpy99I CGWCG 1 cut(s) 578
HpyAV CCTTC 5 cut(s) 194, 203, 616, 922, 996
HpyCH4III ACNGT 4 cut(s) 175, 193, 645, 878
HpyCH4IV ACGT 3 cut(s) 182, 418, 576
HpyCH4V TGCA 4 cut(s) 140, 343, 380, 416
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 152, 558, 601, 610
HpyF3I CTNAG 5 cut(s) 27, 111, 129, 216, 535
HpySE526I ACGT 3 cut(s) 182, 418, 576
Hsp92I GRCGYC 1 cut(s) 576
Hsp92II CATG 6 cut(s) 96, 330, 368, 410, 523, 849
HspAI GCGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 2 cut(s) 118, 255
LmnI GCTCC 4 cut(s) 365, 662, 700, 962
Lsp1109I GCAGC 2 cut(s) 441, 472
LweI GCATC 4 cut(s) 108, 149, 674, 922
MaeII ACGT 3 cut(s) 182, 418, 576
MaeIII GTNAC 1 cut(s) 577
MalI GATC 2 cut(s) 120, 257
MbiI CCGCTC 1 cut(s) 146
MboI GATC 2 cut(s) 118, 255
MboII GAAGA 5 cut(s) 32, 660, 695, 728, 866
MhlI GDGCHC 2 cut(s) 382, 418
MlsI TGGCCA 1 cut(s) 91
MluCI AATT 4 cut(s) 195, 599, 729, 786
MluNI TGGCCA 1 cut(s) 91
MlyI GAGTC 4 cut(s) 20, 122, 287, 923
MmeI TCCRAC 1 cut(s) 261
Mox20I TGGCCA 1 cut(s) 91
MscI TGGCCA 1 cut(s) 91
MseI TTAA 1 cut(s) 177
MslI CAYNNNNRTG 2 cut(s) 411, 567
Msp20I TGGCCA 1 cut(s) 91
MspI CCGG 2 cut(s) 596, 697
MspR9I CCNGG 4 cut(s) 698, 821, 910, 925
MvaI CCWGG 3 cut(s) 821, 910, 925
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 5 cut(s) 105, 152, 558, 601, 610
NciI CCSGG 1 cut(s) 698
NcoI CCATGG 2 cut(s) 92, 326
NdeI CATATG 1 cut(s) 7
NdeII GATC 2 cut(s) 118, 255
NlaIII CATG 6 cut(s) 96, 330, 368, 410, 523, 849
NlaIV GGNNCC 2 cut(s) 361, 653
NmuCI GTSAC 1 cut(s) 577
NspI RCATGY 1 cut(s) 849
PagI TCATGA 1 cut(s) 406
PciI ACATGT 1 cut(s) 845
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PfeI GAWTC 3 cut(s) 403, 469, 763
PkrI GCNGC 2 cut(s) 456, 487
PleI GAGTC 4 cut(s) 19, 121, 286, 922
PmaCI CACGTG 1 cut(s) 419
PmlI CACGTG 1 cut(s) 419
PpsI GAGTC 4 cut(s) 19, 121, 286, 922
Ppu21I YACGTR 1 cut(s) 419
PscI ACATGT 1 cut(s) 845
PsiI TTATAA 2 cut(s) 432, 635
Psp6I CCWGG 3 cut(s) 819, 908, 923
PspCI CACGTG 1 cut(s) 419
PspGI CCWGG 3 cut(s) 819, 908, 923
PspN4I GGNNCC 2 cut(s) 361, 653
PspPI GGNCC 1 cut(s) 652
RsaI GTAC 1 cut(s) 1020
RsaNI GTAC 1 cut(s) 1019
RseI CAYNNNNRTG 2 cut(s) 411, 567
SaqAI TTAA 1 cut(s) 177
SatI GCNGC 2 cut(s) 455, 486
Sau3AI GATC 2 cut(s) 118, 255
Sau96I GGNCC 1 cut(s) 652
ScaI AGTACT 1 cut(s) 1020
SchI GAGTC 4 cut(s) 20, 122, 287, 923
ScrFI CCNGG 4 cut(s) 698, 821, 910, 925
SduI GDGCHC 2 cut(s) 382, 418
SfaNI GCATC 4 cut(s) 108, 149, 674, 922
SfcI CTRYAG 1 cut(s) 529
SmiMI CAYNNNNRTG 2 cut(s) 411, 567
Sse9I AATT 4 cut(s) 195, 599, 729, 786
SsiI CCGC 1 cut(s) 144
StyD4I CCNGG 4 cut(s) 696, 819, 908, 923
StyI CCWWGG 2 cut(s) 92, 326
TaaI ACNGT 4 cut(s) 175, 193, 645, 878
TaiI ACGT 3 cut(s) 185, 421, 579
TaqI TCGA 1 cut(s) 391
TasI AATT 4 cut(s) 195, 599, 729, 786
TatI WGTACW 1 cut(s) 1018
TfiI GAWTC 3 cut(s) 403, 469, 763
Tru1I TTAA 1 cut(s) 177
Tru9I TTAA 1 cut(s) 177
TscAI CASTG 2 cut(s) 505, 972
TseFI GTSAC 1 cut(s) 577
TseI GCWGC 2 cut(s) 454, 485
Tsp45I GTSAC 1 cut(s) 577
TspDTI ATGAA 2 cut(s) 33, 690
TspGWI ACGGA 1 cut(s) 955
TspRI CASTG 2 cut(s) 505, 972
VneI GTGCAC 2 cut(s) 378, 414
XceI RCATGY 1 cut(s) 849
ZraI GACGTC 1 cut(s) 577
ZrmI AGTACT 1 cut(s) 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.