MD09G1025000.v1.1

Altered inheritance of mitochondria protein 32-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
1504697 .. 1505621
925 bp
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UTR
Exon/CDS
Intron
MD09G1025000.v1.1.491

Sequence Viewer

Length: 216 bp
ATGAAAAGTTCACTGGAACTGAAGCTTCTGTTGGGCAAAATGGGAGCATCTTCGGATGAAGCTGAAAAAATTAATGACCAGAAGCTTCCAAATGGAGGAGAAAGAAAATCGAGGAGAAGCCCCAAGAAAACGGCAATCAGATTCAGAATAATGAGAACCTTTCAGGCTGTTGCCAGGGTGCAAATAGTAAAGGATTTACATGCTGCAAAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

8.01

Weight (kDa)

10.82

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 41
AfiI CCNNNNNNNGG 1 cut(s) 95
AjnI CCWGG 1 cut(s) 173
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AluBI AGCT 3 cut(s) 25, 62, 85
AluI AGCT 3 cut(s) 25, 62, 85
ApeKI GCWGC 1 cut(s) 203
AseI ATTAAT 1 cut(s) 72
BbvI GCAGC 1 cut(s) 190
BceAI ACGGC 1 cut(s) 147
BciT130I CCWGG 1 cut(s) 175
BisI GCNGC 1 cut(s) 204
BlsI GCNGC 1 cut(s) 205
Bme1390I CCNGG 1 cut(s) 175
BmrFI CCNGG 1 cut(s) 175
BmsI GCATC 1 cut(s) 56
BsaJI CCNNGG 1 cut(s) 174
Bsc4I CCNNNNNNNGG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 18
BseBI CCWGG 1 cut(s) 175
BseDI CCNNGG 1 cut(s) 174
BseGI GGATG 1 cut(s) 61
BseLI CCNNNNNNNGG 1 cut(s) 95
BseNI ACTGG 1 cut(s) 18
BseRI GAGGAG 2 cut(s) 111, 127
BseXI GCAGC 1 cut(s) 190
BslI CCNNNNNNNGG 1 cut(s) 95
BsrI ACTGG 1 cut(s) 18
BssECI CCNNGG 1 cut(s) 174
Bst2UI CCWGG 1 cut(s) 175
BstF5I GGATG 1 cut(s) 61
BstNI CCWGG 1 cut(s) 175
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 173
BstV1I GCAGC 1 cut(s) 190
BtsCI GGATG 1 cut(s) 61
BtsIMutI CAGTG 1 cut(s) 11
CviAII CATG 1 cut(s) 200
CviJI RGCY 5 cut(s) 25, 62, 85, 120, 167
CviKI_1 RGCY 5 cut(s) 25, 62, 85, 120, 167
Eco57I CTGAAG 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 173
FaeI CATG 1 cut(s) 203
FaiI YATR 1 cut(s) 201
FatI CATG 1 cut(s) 199
Fnu4HI GCNGC 1 cut(s) 204
FokI GGATG 1 cut(s) 68
Fsp4HI GCNGC 1 cut(s) 204
GluI GCNGC 1 cut(s) 204
Hin1II CATG 1 cut(s) 203
HindIII AAGCTT 2 cut(s) 23, 83
HinfI GANTC 1 cut(s) 141
Hpy166II GTNNAC 1 cut(s) 11
Hpy188I TCNGA 3 cut(s) 55, 140, 146
Hpy8I GTNNAC 1 cut(s) 11
HpyCH4V TGCA 2 cut(s) 181, 206
Hsp92II CATG 1 cut(s) 203
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 4 cut(s) 92, 149, 160, 187
Lsp1109I GCAGC 1 cut(s) 190
LweI GCATC 1 cut(s) 56
MboII GAAGA 1 cut(s) 42
MluCI AATT 1 cut(s) 69
MnlI CCTC 2 cut(s) 89, 105
MseI TTAA 1 cut(s) 72
MspR9I CCNGG 1 cut(s) 175
MvaI CCWGG 1 cut(s) 175
NlaIII CATG 1 cut(s) 203
NspI RCATGY 1 cut(s) 203
PfeI GAWTC 1 cut(s) 141
PkrI GCNGC 1 cut(s) 205
PshBI ATTAAT 1 cut(s) 72
Psp6I CCWGG 1 cut(s) 173
PspGI CCWGG 1 cut(s) 173
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 1 cut(s) 204
ScrFI CCNGG 1 cut(s) 175
SetI ASST 4 cut(s) 27, 64, 87, 161
SfaNI GCATC 1 cut(s) 56
SgeI CNNG 8 cut(s) 26, 91, 123, 136, 176, 186, 187, 212
Sse9I AATT 1 cut(s) 69
StyD4I CCNGG 1 cut(s) 173
TaqI TCGA 1 cut(s) 110
TasI AATT 1 cut(s) 69
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TscAI CASTG 1 cut(s) 18
TseI GCWGC 1 cut(s) 203
TspDTI ATGAA 2 cut(s) 17, 72
TspRI CASTG 1 cut(s) 18
VspI ATTAAT 1 cut(s) 72
XceI RCATGY 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.