Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001205

Physical Location & Seq

Genomic Coordinates Reverse (-)

1644919 .. 1651017

Gene Structure 6099 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1026400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGTATTCAATTCATATGGAAGGGTGTACCAGTCTCACTGATACTTTTAAGGAGAACCTCCGAACGAAAAATGCATTTGGTGGAATTTTTCTCTCCGGAAATGATATTCCTAACTGGTTAGCCTATGTCGCCGGAGAGGATAAAACTGTCAAATTTGAAGTGCCGCCAAGTACTGATTATATAGGAGGGTTGGCTTTGGGCATCGTTTATTCTTCAGACAACTCCGACTCTACCGGGTATCTATACATTGATGTTGTTAATCGAGTGGATATTGTAAAATGGAATTTGTCTAATGGTCTTACTAATTGGGAGGACTATGAGACTATATCATATAAGTCTAATGAAGACATTGATGACGATACAAAGTTGAGCTATCGCCACGTTTTCCTCTGCTACAAGACCCCCGAGGCCTGGCCATGGCACATTGAAGGCTCCGAGTCCAATCCACTCCCTAAGTTCTTTGCATCCGCTCTCAAAGCTCGCAAGAACGACATAACCGTTAAGACGTTGCTGACAATAATTGAAGGACGCGAAGGAACTGAGTTTTCCAATGGCAATGTATTGATTTTCCCACAAATGATCAAATACAGGGGCTTGAAAGAGTCAAATGTGGACAACTTTATTGATGATGTCCTTGTGAATGACAAACCATGGGCTTCTGGAGTGCAAGAGCCGTTGACTGGCCCCCATGTATTCATATGCGCACATATGAGTCAAAATGAATGGAATCGTTATCGTGCACGTGTTCTCATTGATAAGTTCAAAGAGGAGGCTGAGCTGCGAGGATTGACGGATCAGGTATTTGTTACTGCTTGCTCTCACATTGGAGGCCACAAGTATGCTGGAAAACTCATGATCTACAGCCGAGATTCAGATGGAAGCATGACATGCCATTGGTATCCCTTCGTCACTCCTTTTGACGTGGCGAAATCACTTGATAAGCATATTGGGAAGAGAAAGATTACAGAACGACTTTGGAGGGGCCAAATCGGAGCATCTTTTGATGAAGCTGAAAAATCTAATGACCAGAAGCTTCCAAATGGAGGAGAAAATAAGAAAATCAAGAAGCCCCAAGAAAATGGCAATCAGAGGGGGACGAAGCGGAAGCGAGAATGTCGGCTTGGGAAGGGAGAGATTATAGAACGACATCGGAGGGGCCAAACTAGAGCATCTTCCGATGAAGCTGAAGAAATTAATGATCGAGAGCTTCCAAATGGAGAAAAAAAAAAGAAAATCGAGGAGAAGCGTTGTTACCAGGGTGCTAATAGTAATGGATCTACATGCTGCAAAGAAGTAAGTTTGGAGCAGAACCATTGTTCTAAAAATTGGCCTAGGCGACGCCTATATGGCGCTGGGCGGTGGAGCCCCGCCCTTATTTTGGGCAAGGCGTTTGGAAAAATCGTCTGGAAGCTAAGCGGGCCTAGGCGGAGAGCTAGGCGGCACCTAGGCAATCCTAGGCAGTTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010499 GO:0012505 GO:0016020 GO:0019538 GO:0019773 GO:0019941 GO:0030163 GO:0031597 GO:0032991 GO:0034515 GO:0042175 GO:0042802 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

Proteasome Proteasome_A_N

Protein Analysis

490

Amino Acids

55.82

Weight (kDa)

9.04

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suc_Fer-like	PF06999	125 - 328	2.2e-27	Sucrase/ferredoxin-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27570 AT3G27570 AT5G40510 AT5G40510
fragaria_vesca	FvH4_6g51500
malus_domestica	MD00G1190200.v1.1 MD09G1024100.v1.1 MD09G1024300.v1.1 MD09G1024500.v1.1 MD09G1024800.v1.1 MD09G1025000.v1.1 MD09G1025100.v1.1 MD09G1025500.v1.1 MD09G1025700.v1.1 MD09G1025900.v1.1 MD09G1026400.v1.1 MD09G1026600.v1.1 MD09G1044600.v1.1 MD09G1045300.v1.1 MD17G1026300.v1.1
prunus_persica	Prupe.3G292400_v2.0.a1 Prupe.3G292400_v2.0.a1
pyrus_communis	pycom111g02020 pycom111g02070 pycom17g02140
rosa_chinensis	RchiOBHm_Chr1g0344721 RchiOBHm_Chr2g0151191 RchiOBHm_Chr2g0173141 RchiOBHm_Chr6g0279861
rosa_laevigata	RLG00000013592 RLG00000022162
rosa_multiflora	Rmu_sc0000248.1_g000001 Rmu_sc0002070.1_g000061 Rmu_sc0002298.1_g000011 Rmu_sc0003981.1_g000001 Rmu_sc0005168.1_g000003 Rmu_sc0020537.1_g000002
rosa_roxburghii	Rroxscaffold_2G00079200 Rroxscaffold_5G00353780
rosa_rugosa	Rorug01G0115800 Rorug01G0115900 Rorug01G0116000 Rorug01G0116100 Rorug01G0116200 Rorug01G0281400 Rorug02G0238200 Rorug02G0347400 Rorug02G0565600.1 Rorug05G0221000
rosa_samantha	Rh2AG645700 Rh2BG656400 Rh2CG621500 Rh2DG669800 Rh6DG092700
rosa_wichuraiana	Rw2G053030 Rw7G017880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	703
AccB1I	GGYRCC	1 cut(s)	1440
AccBSI	CCGCTC	1 cut(s)	470
AccII	CGCG	1 cut(s)	531
AccIII	TCCGGA	1 cut(s)	95
AciI	CCGC	8 cut(s)	164, 468, 1102, 1357, 1368, 1416, 1426, 1438
AclWI	GGATC	2 cut(s)	801, 1282
AcoI	YGGCCR	1 cut(s)	413
AcsI	RAATTY	3 cut(s)	84, 152, 283
AcuI	CTGAAG	2 cut(s)	198, 1206
AcvI	CACGTG	1 cut(s)	743
AcyI	GRCGYC	1 cut(s)	1339
AfaI	GTAC	2 cut(s)	28, 172
AfiI	CCNNNNNNNGG	5 cut(s)	411, 417, 680, 1043, 1378
AflIII	ACRYGT	1 cut(s)	742
AgsI	TTSAA	6 cut(s)	9, 158, 428, 524, 598, 763
AjiI	CACGTC	1 cut(s)	922
AjnI	CCWGG	2 cut(s)	410, 1254
AjuI	GAANNNNNNNTTGG	2 cut(s)	1104, 1136
AluBI	AGCT	9 cut(s)	372, 479, 778, 1010, 1033, 1184, 1207, 1411, 1433
AluI	AGCT	9 cut(s)	372, 479, 778, 1010, 1033, 1184, 1207, 1411, 1433
Alw21I	GWGCWC	1 cut(s)	742
Alw26I	GTCTC	2 cut(s)	38, 314
Alw44I	GTGCAC	1 cut(s)	738
AlwI	GGATC	2 cut(s)	801, 1282
Ama87I	CYCGRG	1 cut(s)	404
Aor13HI	TCCGGA	1 cut(s)	95
AoxI	GGCC	8 cut(s)	408, 413, 682, 829, 982, 1156, 1328, 1418
ApaLI	GTGCAC	1 cut(s)	738
ApeKI	GCWGC	2 cut(s)	778, 1284
ApoI	RAATTY	3 cut(s)	84, 152, 283
AseI	ATTAAT	1 cut(s)	1194
AspA2I	CCTAGG	4 cut(s)	1331, 1421, 1444, 1454
AspLEI	GCGC	2 cut(s)	704, 1352
AspS9I	GGNCC	4 cut(s)	683, 982, 1156, 1418
AsuC2I	CCSGG	1 cut(s)	235
AvaI	CYCGRG	1 cut(s)	404
AvrII	CCTAGG	4 cut(s)	1331, 1421, 1444, 1454
BaeGI	GKGCMC	1 cut(s)	742
BalI	TGGCCA	1 cut(s)	415
BanI	GGYRCC	1 cut(s)	1440
BanII	GRGCYC	1 cut(s)	1367
BarI	GAAGNNNNNNTAC	2 cut(s)	1235, 1267
BbrPI	CACGTG	1 cut(s)	743
BbsI	GAAGAC	1 cut(s)	351
Bbv12I	GWGCWC	1 cut(s)	742
BbvI	GCAGC	2 cut(s)	765, 1271
BccI	CCATC	1 cut(s)	869
BceAI	ACGGC	1 cut(s)	658
BciT130I	CCWGG	2 cut(s)	412, 1256
BciVI	GTATCC	1 cut(s)	909
BclI	TGATCA	1 cut(s)	579
BcnI	CCSGG	1 cut(s)	235
BcoDI	GTCTC	2 cut(s)	38, 314
BfaI	CTAG	6 cut(s)	1164, 1332, 1422, 1434, 1445, 1455
BfmI	CTRYAG	1 cut(s)	859
BfoI	RGCGCY	1 cut(s)	1353
BfuI	GTATCC	1 cut(s)	909
BglI	GCCNNNNNGGC	1 cut(s)	1347
BisI	GCNGC	4 cut(s)	164, 779, 1285, 1439
BlnI	CCTAGG	4 cut(s)	1331, 1421, 1444, 1454
BlpI	GCTNAGC	2 cut(s)	774, 1412
BlsI	GCNGC	4 cut(s)	165, 780, 1286, 1440
BmcAI	AGTACT	1 cut(s)	172
Bme1390I	CCNGG	3 cut(s)	235, 412, 1256
BmeT110I	CYCGRG	1 cut(s)	404
BmgBI	CACGTC	1 cut(s)	922
BmgT120I	GGNCC	4 cut(s)	683, 982, 1156, 1418
BmiI	GGNNCC	6 cut(s)	433, 685, 983, 1157, 1364, 1442
BmrFI	CCNGG	3 cut(s)	235, 412, 1256
BmsI	GCATC	4 cut(s)	210, 473, 1004, 1178
BpiI	GAAGAC	1 cut(s)	351
BpmI	CTGGAG	1 cut(s)	681
Bpu1102I	GCTNAGC	2 cut(s)	774, 1412
BpuMI	CCSGG	1 cut(s)	235
BsaAI	YACGTR	1 cut(s)	743
BsaHI	GRCGYC	1 cut(s)	1339
BsaJI	CCNNGG	8 cut(s)	405, 416, 650, 1255, 1331, 1421, 1444, 1454
BsaWI	WCCGGW	1 cut(s)	95
Bsc4I	CCNNNNNNNGG	5 cut(s)	411, 417, 680, 1043, 1378
Bse1I	ACTGG	3 cut(s)	30, 119, 685
Bse3DI	GCAATG	1 cut(s)	562
BseAI	TCCGGA	1 cut(s)	95
BseBI	CCWGG	2 cut(s)	412, 1256
BseDI	CCNNGG	8 cut(s)	405, 416, 650, 1255, 1331, 1421, 1444, 1454
BseGI	GGATG	1 cut(s)	464
BseLI	CCNNNNNNNGG	5 cut(s)	411, 417, 680, 1043, 1378
BseMI	GCAATG	1 cut(s)	562
BseMII	CTCAG	2 cut(s)	531, 765
BseNI	ACTGG	3 cut(s)	30, 119, 685
BseRI	GAGGAG	3 cut(s)	782, 1059, 1253
BseSI	GKGCMC	1 cut(s)	742
BseXI	GCAGC	2 cut(s)	765, 1271
BseYI	CCCAGC	1 cut(s)	1352
Bsh1236I	CGCG	1 cut(s)	531
BshFI	GGCC	8 cut(s)	410, 415, 684, 831, 984, 1158, 1330, 1420
BshNI	GGYRCC	1 cut(s)	1440
BsiHKAI	GWGCWC	1 cut(s)	742
BsiHKCI	CYCGRG	1 cut(s)	404
BsiSI	CCGG	3 cut(s)	96, 132, 234
BslFI	GGGAC	1 cut(s)	1108
BslI	CCNNNNNNNGG	5 cut(s)	411, 417, 680, 1043, 1378
BsmAI	GTCTC	2 cut(s)	38, 314
BsmFI	GGGAC	1 cut(s)	1108
BsnI	GGCC	8 cut(s)	410, 415, 684, 831, 984, 1158, 1330, 1420
BsoBI	CYCGRG	1 cut(s)	404
Bsp1286I	GDGCHC	2 cut(s)	742, 1367
Bsp13I	TCCGGA	1 cut(s)	95
Bsp143I	GATC	5 cut(s)	579, 793, 855, 1198, 1274
Bsp1720I	GCTNAGC	2 cut(s)	774, 1412
Bsp19I	CCATGG	2 cut(s)	416, 650
BspACI	CCGC	8 cut(s)	164, 468, 1102, 1357, 1368, 1416, 1426, 1438
BspANI	GGCC	8 cut(s)	410, 415, 684, 831, 984, 1158, 1330, 1420
BspCNI	CTCAG	2 cut(s)	532, 766
BspEI	TCCGGA	1 cut(s)	95
BspFNI	CGCG	1 cut(s)	531
BspHI	TCATGA	1 cut(s)	852
BspLI	GGNNCC	6 cut(s)	433, 685, 983, 1157, 1364, 1442
BspPI	GGATC	2 cut(s)	801, 1282
BspT107I	GGYRCC	1 cut(s)	1440
BsrBI	CCGCTC	1 cut(s)	470
BsrDI	GCAATG	1 cut(s)	562
BsrI	ACTGG	3 cut(s)	30, 119, 685
BssECI	CCNNGG	8 cut(s)	405, 416, 650, 1255, 1331, 1421, 1444, 1454
BssMI	GATC	5 cut(s)	579, 793, 855, 1198, 1274
BssNI	GRCGYC	1 cut(s)	1339
BssT1I	CCWWGG	6 cut(s)	416, 650, 1331, 1421, 1444, 1454
Bst2UI	CCWGG	2 cut(s)	412, 1256
Bst4CI	ACNGT	2 cut(s)	148, 499
Bst6I	CTCTTC	1 cut(s)	947
BstACI	GRCGYC	1 cut(s)	1339
BstAPI	GCANNNNNTGC	1 cut(s)	888
BstBAI	YACGTR	1 cut(s)	743
BstC8I	GCNNGC	3 cut(s)	481, 814, 1418
BstDEI	CTNAG	4 cut(s)	453, 540, 774, 1412
BstDSI	CCRYGG	2 cut(s)	416, 650
BstF5I	GGATG	1 cut(s)	464
BstFNI	CGCG	1 cut(s)	531
BstH2I	RGCGCY	1 cut(s)	1353
BstHHI	GCGC	2 cut(s)	704, 1352
BstKTI	GATC	5 cut(s)	582, 796, 858, 1201, 1277
BstMAI	GTCTC	2 cut(s)	38, 314
BstMBI	GATC	5 cut(s)	579, 793, 855, 1198, 1274
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 476, 888, 1347, 1417
BstNI	CCWGG	2 cut(s)	412, 1256
BstNSI	RCATGY	2 cut(s)	891, 1284
BstSCI	CCNGG	3 cut(s)	233, 410, 1254
BstSFI	CTRYAG	1 cut(s)	859
BstSLI	GKGCMC	1 cut(s)	742
BstUI	CGCG	1 cut(s)	531
BstV1I	GCAGC	2 cut(s)	765, 1271
BstV2I	GAAGAC	1 cut(s)	351
BstX2I	RGATCY	1 cut(s)	1274
BstXI	CCANNNNNNTGG	1 cut(s)	1079
BstYI	RGATCY	1 cut(s)	1274
BsuI	GTATCC	1 cut(s)	909
BsuRI	GGCC	8 cut(s)	410, 415, 684, 831, 984, 1158, 1330, 1420
BtgI	CCRYGG	2 cut(s)	416, 650
BtrI	CACGTC	1 cut(s)	922
BtsCI	GGATG	1 cut(s)	464
BtsIMutI	CAGTG	1 cut(s)	36
Cac8I	GCNNGC	3 cut(s)	481, 814, 1418
CciI	TCATGA	1 cut(s)	852
CfoI	GCGC	2 cut(s)	704, 1352
Cfr13I	GGNCC	4 cut(s)	683, 982, 1156, 1418
CseI	GACGC	2 cut(s)	537, 1347
Csp6I	GTAC	2 cut(s)	27, 171
CviAII	CATG	7 cut(s)	417, 651, 689, 853, 883, 888, 1281
CviQI	GTAC	2 cut(s)	27, 171
DdeI	CTNAG	4 cut(s)	453, 540, 774, 1412
DpnI	GATC	5 cut(s)	581, 795, 857, 1200, 1276
DpnII	GATC	5 cut(s)	579, 793, 855, 1198, 1274
EaeI	YGGCCR	1 cut(s)	413
Eam1104I	CTCTTC	1 cut(s)	947
EarI	CTCTTC	1 cut(s)	947
EciI	GGCGGA	1 cut(s)	1441
Eco130I	CCWWGG	6 cut(s)	416, 650, 1331, 1421, 1444, 1454
Eco147I	AGGCCT	1 cut(s)	410
Eco24I	GRGCYC	1 cut(s)	1367
Eco57I	CTGAAG	2 cut(s)	198, 1206
Eco72I	CACGTG	1 cut(s)	743
Eco88I	CYCGRG	1 cut(s)	404
EcoRII	CCWGG	2 cut(s)	410, 1254
EcoT14I	CCWWGG	6 cut(s)	416, 650, 1331, 1421, 1444, 1454
EcoT22I	ATGCAT	1 cut(s)	76
EcoT38I	GRGCYC	1 cut(s)	1367
ErhI	CCWWGG	6 cut(s)	416, 650, 1331, 1421, 1444, 1454
FaeI	CATG	7 cut(s)	420, 654, 692, 856, 886, 891, 1284
FaqI	GGGAC	1 cut(s)	1108
FatI	CATG	7 cut(s)	416, 650, 688, 852, 882, 887, 1280
FauI	CCCGC	2 cut(s)	1375, 1409
FauNDI	CATATG	3 cut(s)	15, 698, 708
FbaI	TGATCA	1 cut(s)	579
Fnu4HI	GCNGC	4 cut(s)	164, 779, 1285, 1439
FokI	GGATG	1 cut(s)	451
FriOI	GRGCYC	1 cut(s)	1367
Fsp4HI	GCNGC	4 cut(s)	164, 779, 1285, 1439
FspAI	RTGCGCAY	1 cut(s)	703
FspBI	CTAG	6 cut(s)	1164, 1332, 1422, 1434, 1445, 1455
FspI	TGCGCA	1 cut(s)	703
GlaI	GCGC	2 cut(s)	703, 1351
GluI	GCNGC	4 cut(s)	164, 779, 1285, 1439
GsaI	CCCAGC	1 cut(s)	1356
GsuI	CTGGAG	1 cut(s)	681
HaeII	RGCGCY	1 cut(s)	1353
HaeIII	GGCC	8 cut(s)	410, 415, 684, 831, 984, 1158, 1330, 1420
HapII	CCGG	3 cut(s)	96, 132, 234
HgaI	GACGC	2 cut(s)	537, 1347
HhaI	GCGC	2 cut(s)	704, 1352
Hin1I	GRCGYC	1 cut(s)	1339
Hin1II	CATG	7 cut(s)	420, 654, 692, 856, 886, 891, 1284
Hin6I	GCGC	2 cut(s)	702, 1350
HinP1I	GCGC	2 cut(s)	702, 1350
HincII	GTYRAC	1 cut(s)	678
HindII	GTYRAC	1 cut(s)	678
HindIII	AAGCTT	1 cut(s)	1031
HinfI	GANTC	6 cut(s)	227, 437, 602, 712, 727, 869
HpaII	CCGG	3 cut(s)	96, 132, 234
Hpy166II	GTNNAC	4 cut(s)	27, 613, 678, 740
Hpy188I	TCNGA	9 cut(s)	62, 217, 226, 436, 874, 992, 1089, 1152, 1177
Hpy188III	TCNNGA	6 cut(s)	96, 660, 853, 1063, 1202, 1405
Hpy8I	GTNNAC	4 cut(s)	27, 613, 678, 740
Hpy99I	CGWCG	1 cut(s)	1341
HpyAV	CCTTC	6 cut(s)	14, 422, 518, 527, 913, 1120
HpyCH4III	ACNGT	2 cut(s)	148, 499
HpyCH4IV	ACGT	4 cut(s)	381, 506, 742, 921
HpyCH4V	TGCA	5 cut(s)	74, 464, 667, 740, 1287
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 476, 888, 1347, 1417
HpyF3I	CTNAG	4 cut(s)	453, 540, 774, 1412
HpySE526I	ACGT	4 cut(s)	381, 506, 742, 921
Hsp92I	GRCGYC	1 cut(s)	1339
Hsp92II	CATG	7 cut(s)	420, 654, 692, 856, 886, 891, 1284
HspAI	GCGC	2 cut(s)	702, 1350
Kpn2I	TCCGGA	1 cut(s)	95
Ksp22I	TGATCA	1 cut(s)	579
Kzo9I	GATC	5 cut(s)	579, 793, 855, 1198, 1274
LmnI	GCTCC	4 cut(s)	437, 992, 1303, 1362
Lsp1109I	GCAGC	2 cut(s)	765, 1271
LweI	GCATC	4 cut(s)	210, 473, 1004, 1178
MaeI	CTAG	6 cut(s)	1164, 1332, 1422, 1434, 1445, 1455
MaeII	ACGT	4 cut(s)	381, 506, 742, 921
MaeIII	GTNAC	3 cut(s)	805, 907, 1250
MalI	GATC	5 cut(s)	581, 795, 857, 1200, 1276
MbiI	CCGCTC	1 cut(s)	470
MboI	GATC	5 cut(s)	579, 793, 855, 1198, 1274
MboII	GAAGA	5 cut(s)	204, 356, 964, 1164, 1199
MflI	RGATCY	1 cut(s)	1274
MhlI	GDGCHC	2 cut(s)	742, 1367
MlsI	TGGCCA	1 cut(s)	415
MluCI	AATT	8 cut(s)	9, 84, 152, 283, 304, 519, 1191, 1324
MluNI	TGGCCA	1 cut(s)	415
MlyI	GAGTC	4 cut(s)	221, 446, 611, 721
MmeI	TCCRAC	1 cut(s)	249
Mox20I	TGGCCA	1 cut(s)	415
Mph1103I	ATGCAT	1 cut(s)	76
MroI	TCCGGA	1 cut(s)	95
MscI	TGGCCA	1 cut(s)	415
MseI	TTAA	5 cut(s)	48, 258, 501, 1194, 1468
MslI	CAYNNNNRTG	1 cut(s)	837
Msp20I	TGGCCA	1 cut(s)	415
MspI	CCGG	3 cut(s)	96, 132, 234
MspR9I	CCNGG	3 cut(s)	235, 412, 1256
MvaI	CCWGG	2 cut(s)	412, 1256
MvnI	CGCG	1 cut(s)	531
MwoI	GCNNNNNNNGC	5 cut(s)	128, 476, 888, 1347, 1417
NciI	CCSGG	1 cut(s)	235
NcoI	CCATGG	2 cut(s)	416, 650
NdeI	CATATG	3 cut(s)	15, 698, 708
NdeII	GATC	5 cut(s)	579, 793, 855, 1198, 1274
NlaIII	CATG	7 cut(s)	420, 654, 692, 856, 886, 891, 1284
NlaIV	GGNNCC	6 cut(s)	433, 685, 983, 1157, 1364, 1442
NmeAIII	GCCGAG	1 cut(s)	890
NmuCI	GTSAC	1 cut(s)	907
NsbI	TGCGCA	1 cut(s)	703
NsiI	ATGCAT	1 cut(s)	76
NspI	RCATGY	2 cut(s)	891, 1284
PagI	TCATGA	1 cut(s)	852
PceI	AGGCCT	1 cut(s)	410
PcsI	WCGNNNNNNNCGW	1 cut(s)	495
PfeI	GAWTC	2 cut(s)	727, 869
PkrI	GCNGC	4 cut(s)	165, 780, 1286, 1440
PleI	GAGTC	4 cut(s)	221, 445, 610, 720
PmaCI	CACGTG	1 cut(s)	743
PmlI	CACGTG	1 cut(s)	743
PpsI	GAGTC	4 cut(s)	221, 445, 610, 720
Ppu21I	YACGTR	1 cut(s)	743
PshBI	ATTAAT	1 cut(s)	1194
Psp6I	CCWGG	2 cut(s)	410, 1254
PspCI	CACGTG	1 cut(s)	743
PspFI	CCCAGC	1 cut(s)	1352
PspGI	CCWGG	2 cut(s)	410, 1254
PspN4I	GGNNCC	6 cut(s)	433, 685, 983, 1157, 1364, 1442
PspPI	GGNCC	4 cut(s)	683, 982, 1156, 1418
PsuI	RGATCY	1 cut(s)	1274
RsaI	GTAC	2 cut(s)	28, 172
RsaNI	GTAC	2 cut(s)	27, 171
RseI	CAYNNNNRTG	1 cut(s)	837
SaqAI	TTAA	5 cut(s)	48, 258, 501, 1194, 1468
SatI	GCNGC	4 cut(s)	164, 779, 1285, 1439
Sau3AI	GATC	5 cut(s)	579, 793, 855, 1198, 1274
Sau96I	GGNCC	4 cut(s)	683, 982, 1156, 1418
ScaI	AGTACT	1 cut(s)	172
SchI	GAGTC	4 cut(s)	221, 446, 611, 721
ScrFI	CCNGG	3 cut(s)	235, 412, 1256
SduI	GDGCHC	2 cut(s)	742, 1367
SfaNI	GCATC	4 cut(s)	210, 473, 1004, 1178
SfcI	CTRYAG	1 cut(s)	859
SmiMI	CAYNNNNRTG	1 cut(s)	837
Sse9I	AATT	8 cut(s)	9, 84, 152, 283, 304, 519, 1191, 1324
SseBI	AGGCCT	1 cut(s)	410
SsiI	CCGC	8 cut(s)	164, 468, 1102, 1357, 1368, 1416, 1426, 1438
SspMI	CTAG	6 cut(s)	1164, 1332, 1422, 1434, 1445, 1455
StuI	AGGCCT	1 cut(s)	410
StyD4I	CCNGG	3 cut(s)	233, 410, 1254
StyI	CCWWGG	6 cut(s)	416, 650, 1331, 1421, 1444, 1454
TaaI	ACNGT	2 cut(s)	148, 499
TaiI	ACGT	4 cut(s)	384, 509, 745, 924
TaqI	TCGA	3 cut(s)	262, 1201, 1236
TasI	AATT	8 cut(s)	9, 84, 152, 283, 304, 519, 1191, 1324
TatI	WGTACW	1 cut(s)	170
TauI	GCSGC	2 cut(s)	166, 1441
TfiI	GAWTC	2 cut(s)	727, 869
Tru1I	TTAA	5 cut(s)	48, 258, 501, 1194, 1468
Tru9I	TTAA	5 cut(s)	48, 258, 501, 1194, 1468
TscAI	CASTG	1 cut(s)	43
TseFI	GTSAC	1 cut(s)	907
TseI	GCWGC	2 cut(s)	778, 1284
Tsp45I	GTSAC	1 cut(s)	907
TspDTI	ATGAA	5 cut(s)	357, 685, 735, 1020, 1194
TspGWI	ACGGA	1 cut(s)	806
TspRI	CASTG	1 cut(s)	43
VneI	GTGCAC	1 cut(s)	738
VspI	ATTAAT	1 cut(s)	1194
XapI	RAATTY	3 cut(s)	84, 152, 283
XceI	RCATGY	2 cut(s)	891, 1284
XcmI	CCANNNNNNNNNTGG	1 cut(s)	839
XmaJI	CCTAGG	4 cut(s)	1331, 1421, 1444, 1454
XspI	CTAG	6 cut(s)	1164, 1332, 1422, 1434, 1445, 1455
ZrmI	AGTACT	1 cut(s)	172
Zsp2I	ATGCAT	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.