Rh2CG621500

Altered inheritance of mitochondria protein 32-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001205
Physical Location & Seq
Forward (+)
79622081 .. 79625788
3708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG621500.1

Sequence Viewer

Length: 1038 bp
ATGTCAACAAATGTTCTTGTTGTGTTAGATATGTTATTCACTCCACATGAGGTTTTATATTGTGATAAATTGACTGAACTCATTAGATTTGTAAGCTTCAGTAGTTTAGTTCTACATATTTCTCTTCTCTGTGACGAGTCTGTGACCGTTTCATGTTTGGGATTGTGTCCTATAACTTTCTCCTCTGACTTCAATGCTGCTTTGCTTTTGGATGATAGGGGCTTGAAAGAGTCAGATGTTGATAGCTTTGTGGATGATGTTATCGTGAATGATAAAGCATGGGCGTCTGGAGCACGGGAGGTCTTGACTGGTTCTCACATTTTTGTGTGTGCCCATGGTAGTCGAGATCGTAGATGTGGTGTTTGTGGACCTGTTCTCATTGATAAATTCATAGAGGAGGCTGAATTGCGAGGACTGAAGGATCAGGTGTTTGTTAGTCCCTGTTCTCACATTGGGGGCCACAAGTATGCTGGGAACTTGATTATCTACAGCCCTGGTGCAGATGGAAAGATCACTGGTCACTGGTATGGCTATGTTGCTCCTGATGATGTACCGGAATTGCTTGATGAGCATATTGGGAAAGGGAAGATTATAGAACGATTATGGAGAGGCGAAATGGGAGTATCTGCTGAGGAAGCTGAAAAGGTTAATGAACACAAGCTTCCAAATGGAGAAAGTGAAAAATTTAAGGACCAGAAGCTTCCAATTGGAGAAGGTTCTAAGAAAAGCAAGGAAAATCCCCAAGAAAATGGCACTCAGATTCAGAACAGCAATGATAACTTTGCAGGTTGTTGCCAGGGTGCTAATGGAGTCTCATGCTGCAGAGATGGAAGTTTGGAGCAGAACAGTGGAATCGAGGAAAAGAAGCAGAAAGAAACTACGGAAGCTAGCAGTGGCAAGAAGGATGCAGTGGGATGCAAACTGACAAGCTACATGGGAAAGTGGGAGCAAAGTGATATCCTTGCAGCTGTCGCGGTGGTGGGAGCAGTGGCAACTGTGGGTGTGGCGGTCTATAGCTTTTACAGAAGGTCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Suc_Fer-like

Protein Analysis

345

Amino Acids

37.43

Weight (kDa)

5.15

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suc_Fer-like PF06999 74 - 204 1e-35 Sucrase/ferredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 776
AccII CGCG 1 cut(s) 974
AciI CCGC 2 cut(s) 974, 1007
AclWI GGATC 1 cut(s) 429
AcsI RAATTY 2 cut(s) 386, 683
AcuI CTGAAG 2 cut(s) 82, 437
AcyI GRCGYC 1 cut(s) 284
AfaI GTAC 1 cut(s) 552
AgsI TTSAA 2 cut(s) 193, 226
AjnI CCWGG 2 cut(s) 493, 795
AluBI AGCT 9 cut(s) 96, 246, 638, 661, 700, 887, 930, 968, 1017
AluI AGCT 9 cut(s) 96, 246, 638, 661, 700, 887, 930, 968, 1017
Alw21I GWGCWC 1 cut(s) 295
Alw26I GTCTC 1 cut(s) 817
AlwI GGATC 1 cut(s) 429
AoxI GGCC 1 cut(s) 457
ApeKI GCWGC 3 cut(s) 197, 819, 965
ApoI RAATTY 2 cut(s) 386, 683
AspS9I GGNCC 3 cut(s) 368, 457, 691
AsuNHI GCTAGC 1 cut(s) 887
AvaII GGWCC 2 cut(s) 368, 691
BaeGI GKGCMC 1 cut(s) 334
Bbv12I GWGCWC 1 cut(s) 295
BbvCI CCTCAGC 1 cut(s) 630
BbvI GCAGC 3 cut(s) 184, 806, 977
BccI CCATC 2 cut(s) 497, 821
BciT130I CCWGG 2 cut(s) 495, 797
BcoDI GTCTC 1 cut(s) 817
BfaI CTAG 1 cut(s) 888
BfmI CTRYAG 3 cut(s) 487, 820, 1012
BfuAI ACCTGC 1 cut(s) 776
BisI GCNGC 3 cut(s) 198, 820, 966
BlsI GCNGC 3 cut(s) 199, 821, 967
Bme1390I CCNGG 2 cut(s) 495, 797
Bme18I GGWCC 2 cut(s) 368, 691
BmgT120I GGNCC 3 cut(s) 368, 457, 691
BmiI GGNNCC 1 cut(s) 458
BmrFI CCNGG 2 cut(s) 495, 797
BmsI GCATC 2 cut(s) 895, 905
BmtI GCTAGC 1 cut(s) 891
BpmI CTGGAG 1 cut(s) 309
Bpu10I CCTNAGC 1 cut(s) 630
BsaHI GRCGYC 1 cut(s) 284
BsaJI CCNNGG 3 cut(s) 334, 493, 796
BsaWI WCCGGW 1 cut(s) 553
Bse1I ACTGG 3 cut(s) 313, 520, 527
Bse3DI GCAATG 1 cut(s) 778
BseBI CCWGG 2 cut(s) 495, 797
BseDI CCNNGG 3 cut(s) 334, 493, 796
BseGI GGATG 4 cut(s) 217, 259, 910, 920
BseMI GCAATG 1 cut(s) 778
BseMII CTCAG 2 cut(s) 621, 770
BseNI ACTGG 3 cut(s) 313, 520, 527
BseRI GAGGAG 2 cut(s) 172, 410
BseSI GKGCMC 1 cut(s) 334
BseXI GCAGC 3 cut(s) 184, 806, 977
BseYI CCCAGC 1 cut(s) 470
BsgI GTGCAG 1 cut(s) 519
Bsh1236I CGCG 1 cut(s) 974
BshFI GGCC 1 cut(s) 459
BsiHKAI GWGCWC 1 cut(s) 295
BsiSI CCGG 1 cut(s) 554
BslFI GGGAC 1 cut(s) 423
BsmAI GTCTC 1 cut(s) 817
BsmFI GGGAC 1 cut(s) 423
BsnI GGCC 1 cut(s) 459
Bsp1286I GDGCHC 2 cut(s) 295, 334
Bsp143I GATC 3 cut(s) 346, 421, 510
Bsp19I CCATGG 1 cut(s) 334
BspACI CCGC 2 cut(s) 974, 1007
BspANI GGCC 1 cut(s) 459
BspCNI CTCAG 2 cut(s) 622, 769
BspFNI CGCG 1 cut(s) 974
BspLI GGNNCC 1 cut(s) 458
BspMAI CTGCAG 1 cut(s) 824
BspMI ACCTGC 1 cut(s) 776
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 1 cut(s) 429
BsrDI GCAATG 1 cut(s) 778
BsrI ACTGG 3 cut(s) 313, 520, 527
BssECI CCNNGG 3 cut(s) 334, 493, 796
BssMI GATC 3 cut(s) 346, 421, 510
BssNI GRCGYC 1 cut(s) 284
BssT1I CCWWGG 1 cut(s) 334
Bst2UI CCWGG 2 cut(s) 495, 797
Bst4CI ACNGT 3 cut(s) 148, 848, 997
Bst6I CTCTTC 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 889
BstDEI CTNAG 3 cut(s) 630, 720, 756
BstDSI CCRYGG 1 cut(s) 334
BstF5I GGATG 4 cut(s) 217, 259, 910, 920
BstFNI CGCG 1 cut(s) 974
BstKTI GATC 3 cut(s) 349, 424, 513
BstMAI GTCTC 1 cut(s) 817
BstMBI GATC 3 cut(s) 346, 421, 510
BstMWI GCNNNNNNNGC 4 cut(s) 290, 568, 635, 971
BstNI CCWGG 2 cut(s) 495, 797
BstSCI CCNGG 2 cut(s) 493, 795
BstSFI CTRYAG 3 cut(s) 487, 820, 1012
BstSLI GKGCMC 1 cut(s) 334
BstUI CGCG 1 cut(s) 974
BstV1I GCAGC 3 cut(s) 184, 806, 977
BstXI CCANNNNNNTGG 1 cut(s) 749
BsuRI GGCC 1 cut(s) 459
BtgI CCRYGG 1 cut(s) 334
BtsCI GGATG 4 cut(s) 217, 259, 910, 920
BtsI GCAGTG 3 cut(s) 898, 915, 993
BtsIMutI CAGTG 6 cut(s) 513, 520, 853, 898, 915, 993
BveI ACCTGC 1 cut(s) 776
Cac8I GCNNGC 1 cut(s) 889
Cfr13I GGNCC 3 cut(s) 368, 457, 691
CseI GACGC 1 cut(s) 273
Csp6I GTAC 1 cut(s) 551
CviAII CATG 6 cut(s) 47, 153, 279, 335, 816, 934
CviQI GTAC 1 cut(s) 551
DdeI CTNAG 3 cut(s) 630, 720, 756
DpnI GATC 3 cut(s) 348, 423, 512
DpnII GATC 3 cut(s) 346, 421, 510
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 334
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 2 cut(s) 368, 691
Eco57I CTGAAG 2 cut(s) 82, 437
EcoRII CCWGG 2 cut(s) 493, 795
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 334
ErhI CCWWGG 1 cut(s) 334
FaeI CATG 6 cut(s) 50, 156, 282, 338, 819, 937
FaqI GGGAC 1 cut(s) 423
FatI CATG 6 cut(s) 46, 152, 278, 334, 815, 933
Fnu4HI GCNGC 3 cut(s) 198, 820, 966
FokI GGATG 4 cut(s) 224, 266, 917, 927
Fsp4HI GCNGC 3 cut(s) 198, 820, 966
FspBI CTAG 1 cut(s) 888
GluI GCNGC 3 cut(s) 198, 820, 966
GsaI CCCAGC 1 cut(s) 474
GsuI CTGGAG 1 cut(s) 309
HaeIII GGCC 1 cut(s) 459
HapII CCGG 1 cut(s) 554
HgaI GACGC 1 cut(s) 273
Hin1I GRCGYC 1 cut(s) 284
Hin1II CATG 6 cut(s) 50, 156, 282, 338, 819, 937
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 3 cut(s) 94, 659, 698
HinfI GANTC 5 cut(s) 137, 230, 760, 810, 852
HpaII CCGG 1 cut(s) 554
Hpy166II GTNNAC 2 cut(s) 6, 368
Hpy188I TCNGA 4 cut(s) 187, 235, 759, 765
Hpy188III TCNNGA 5 cut(s) 265, 288, 304, 344, 542
Hpy8I GTNNAC 2 cut(s) 6, 368
HpyAV CCTTC 4 cut(s) 412, 707, 895, 1020
HpyCH4III ACNGT 3 cut(s) 148, 848, 997
HpyCH4V TGCA 6 cut(s) 500, 785, 822, 908, 918, 965
HpyF10VI GCNNNNNNNGC 4 cut(s) 290, 568, 635, 971
HpyF3I CTNAG 3 cut(s) 630, 720, 756
Hsp92I GRCGYC 1 cut(s) 284
Hsp92II CATG 6 cut(s) 50, 156, 282, 338, 819, 937
Kzo9I GATC 3 cut(s) 346, 421, 510
LmnI GCTCC 5 cut(s) 290, 544, 838, 946, 983
Lsp1109I GCAGC 3 cut(s) 184, 806, 977
LweI GCATC 2 cut(s) 895, 905
MaeI CTAG 1 cut(s) 888
MaeIII GTNAC 3 cut(s) 131, 142, 518
MalI GATC 3 cut(s) 348, 423, 512
MboI GATC 3 cut(s) 346, 421, 510
MboII GAAGA 2 cut(s) 116, 598
MfeI CAATTG 1 cut(s) 705
MhlI GDGCHC 2 cut(s) 295, 334
MluCI AATT 6 cut(s) 68, 386, 404, 557, 683, 705
MlyI GAGTC 3 cut(s) 146, 239, 819
MnlI CCTC 9 cut(s) 43, 193, 292, 388, 391, 404, 602, 625, 850
MseI TTAA 2 cut(s) 648, 687
MslI CAYNNNNRTG 3 cut(s) 323, 465, 525
MspA1I CMGCKG 1 cut(s) 968
MspI CCGG 1 cut(s) 554
MspR9I CCNGG 2 cut(s) 495, 797
MunI CAATTG 1 cut(s) 705
MvaI CCWGG 2 cut(s) 495, 797
MvnI CGCG 1 cut(s) 974
MwoI GCNNNNNNNGC 4 cut(s) 290, 568, 635, 971
NcoI CCATGG 1 cut(s) 334
NdeII GATC 3 cut(s) 346, 421, 510
NheI GCTAGC 1 cut(s) 887
NlaIII CATG 6 cut(s) 50, 156, 282, 338, 819, 937
NlaIV GGNNCC 1 cut(s) 458
NmuCI GTSAC 3 cut(s) 131, 142, 518
PfeI GAWTC 2 cut(s) 760, 852
PkrI GCNGC 3 cut(s) 199, 821, 967
PleI GAGTC 3 cut(s) 145, 238, 818
PpsI GAGTC 3 cut(s) 145, 238, 818
Psp6I CCWGG 2 cut(s) 493, 795
PspFI CCCAGC 1 cut(s) 470
PspGI CCWGG 2 cut(s) 493, 795
PspN4I GGNNCC 1 cut(s) 458
PspPI GGNCC 3 cut(s) 368, 457, 691
PstI CTGCAG 1 cut(s) 824
PvuII CAGCTG 1 cut(s) 968
RsaI GTAC 1 cut(s) 552
RsaNI GTAC 1 cut(s) 551
RseI CAYNNNNRTG 3 cut(s) 323, 465, 525
SaqAI TTAA 2 cut(s) 648, 687
SatI GCNGC 3 cut(s) 198, 820, 966
Sau3AI GATC 3 cut(s) 346, 421, 510
Sau96I GGNCC 3 cut(s) 368, 457, 691
SchI GAGTC 3 cut(s) 146, 239, 819
ScrFI CCNGG 2 cut(s) 495, 797
SduI GDGCHC 2 cut(s) 295, 334
SfaNI GCATC 2 cut(s) 895, 905
SfcI CTRYAG 3 cut(s) 487, 820, 1012
SinI GGWCC 2 cut(s) 368, 691
SmiMI CAYNNNNRTG 3 cut(s) 323, 465, 525
Sse9I AATT 6 cut(s) 68, 386, 404, 557, 683, 705
SsiI CCGC 2 cut(s) 974, 1007
SspMI CTAG 1 cut(s) 888
StyD4I CCNGG 2 cut(s) 493, 795
StyI CCWWGG 1 cut(s) 334
TaaI ACNGT 3 cut(s) 148, 848, 997
TaqI TCGA 2 cut(s) 343, 855
TasI AATT 6 cut(s) 68, 386, 404, 557, 683, 705
TfiI GAWTC 2 cut(s) 760, 852
Tru1I TTAA 2 cut(s) 648, 687
Tru9I TTAA 2 cut(s) 648, 687
TscAI CASTG 6 cut(s) 520, 527, 853, 898, 915, 993
TseFI GTSAC 3 cut(s) 131, 142, 518
TseI GCWGC 3 cut(s) 197, 819, 965
Tsp45I GTSAC 3 cut(s) 131, 142, 518
TspDTI ATGAA 3 cut(s) 141, 379, 666
TspGWI ACGGA 1 cut(s) 896
TspRI CASTG 6 cut(s) 520, 527, 853, 898, 915, 993
VpaK11BI GGWCC 2 cut(s) 368, 691
XapI RAATTY 2 cut(s) 386, 683
XcmI CCANNNNNNNNNTGG 2 cut(s) 467, 803
XspI CTAG 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.