Prupe.3G292400_v2.0.a1

Altered inheritance of mitochondria protein 32-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001205
Physical Location & Seq
Forward (+)
26184887 .. 26187529
2643 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G292400.2

Sequence Viewer

Length: 1287 bp
ATGCGCATTGCGCACCCATACCCATACCGACACCACCGTCCCCTAAGCAGCCTCATCATATTAATAGTGACCCAACGCAACTTCTCTCTCATTTCCATCTCAACTTCAACTTCAACTTCAACTTCAACTTCTTCAACCTCCACTAGACGACCCCTTCTACTGCTCCCTCCTCCTCGCTCTCTGCGAACCCTAACAATGGCCTCCGATGACCTCTCCACCTTGCCCGCCGAAGATGAGAAGTACGGCTTCCAGAGATCAGAGATGTACGAGACCAAGCTCGCCGGTACCGTTGACGCCTACGACCGCCACGTCTTCCTCTGCTACAAGACCCCTGAGGCCTGGCCCTCTCGCGTCGAGGGCTCCGAGTCCGATCCGCTACCTAAGTTCTTCGCCTCTGCTCTCAAAGCTCGCAAGAACGACATCGCTGTTAAGACGAAGCTGACAGTATGTGAAGGACGCGAAGGAACTGAGTTTTCAGATGGCGATGTGTTGATTTTCCCAGAAATGATCAAATACAGGGGATTGAAAGAGTCAGATGTGGATAGCTTCGTTGATGATGTCCTTGTGAATAATAAACCATGGGCATCTGGAGTGCATGAGGCGTTGACCGGCTCCCATGTATTTGTATGTGCACATGGTAGTCGAGATCGAAGATGTGGTGTTTGTGGACCTGTTCTCATTGATAAGTTCAGAGAGGAGGCTGAATTGCGAGGACTTACAAATCAAGTGTTCGTTAGTCCTTGCTCTCACATTGGAGGCCACAAGTATGCTGGGAACTTGATTATCTACAGCCCAGGTTCAGATGGAATCCTAACAGGCCACTGGTATGGCTACGTCACACCTGATGATGTGCCAGAATTGCTTGATCAGCATATTGGAAAGGGAGAGATCATAGAACGACTTTGGAGGGGCCAAATGGGAGTATCTTCTGAAGAAGGTGAAAAAATTAATGACCAGAAGCTCCCAAATGGAGAAGATAATAAGAAAAGCGAGGAGAAGCCCCAAGAAAATGGCAATCAGATTCAGAATAATGAGAACTTCTCAGGCTGTTGCCAGGGTGCTAATGGATTTACATGCTGCAAAGATGTAAGTTTGGAGCAGAACAGTGGAAGCGAGGAAAAGAAACTGAAAGAAACCACAGAAGCATGTGGCAAGAAGGATGCCTTGGGCAGGCTGTCAAGTTTGATCGGAAAATGGGAGCAAAGTGATGTTCTTGCAGCTGCAGCCGTGGTTGGAGCAGTGGCAACAGTGGCTGTGGCCTACAGCCTTTATAGAAGGTCAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Suc_Fer-like

Protein Analysis

429

Amino Acids

47.1

Weight (kDa)

5.94

Isoelectric Point (pI)

37.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 36, 308
Acc16I TGCGCA 2 cut(s) 5, 12
Acc65I GGTACC 1 cut(s) 284
AccB1I GGYRCC 1 cut(s) 284
AccII CGCG 2 cut(s) 351, 459
AciI CCGC 3 cut(s) 225, 304, 374
AclWI GGATC 1 cut(s) 365
AcuI CTGAAG 1 cut(s) 951
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 3 cut(s) 242, 266, 286
AfiI CCNNNNNNNGG 2 cut(s) 196, 1170
AgsI TTSAA 6 cut(s) 108, 114, 120, 126, 135, 526
AjiI CACGTC 1 cut(s) 310
AjnI CCWGG 3 cut(s) 338, 793, 1053
AjuI GAANNNNNNNTTGG 2 cut(s) 1148, 1180
AluBI AGCT 6 cut(s) 277, 407, 439, 546, 961, 1220
AluI AGCT 6 cut(s) 277, 407, 439, 546, 961, 1220
Alw21I GWGCWC 1 cut(s) 634
Alw26I GTCTC 1 cut(s) 263
Alw44I GTGCAC 1 cut(s) 630
AlwI GGATC 1 cut(s) 365
AlwNI CAGNNNCTG 1 cut(s) 1253
AoxI GGCC 7 cut(s) 198, 336, 341, 757, 817, 910, 1257
ApaLI GTGCAC 1 cut(s) 630
ApeKI GCWGC 5 cut(s) 48, 1077, 1217, 1220, 1223
AseI ATTAAT 2 cut(s) 62, 948
Asp718I GGTACC 1 cut(s) 284
AspLEI GCGC 2 cut(s) 6, 13
AspS9I GGNCC 3 cut(s) 342, 668, 910
AsuHPI GGTGA 1 cut(s) 950
AvaII GGWCC 1 cut(s) 668
AxyI CCTNAGG 1 cut(s) 333
BaeGI GKGCMC 1 cut(s) 634
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 1 cut(s) 362
BbsI GAAGAC 1 cut(s) 304
Bbv12I GWGCWC 1 cut(s) 634
BbvI GCAGC 5 cut(s) 60, 1064, 1207, 1229, 1235
BccI CCATC 3 cut(s) 104, 473, 797
BceAI ACGGC 2 cut(s) 259, 1211
BciT130I CCWGG 3 cut(s) 340, 795, 1055
BclI TGATCA 2 cut(s) 507, 865
BcoDI GTCTC 1 cut(s) 263
BfaI CTAG 1 cut(s) 144
BfmI CTRYAG 3 cut(s) 787, 1221, 1261
BisI GCNGC 5 cut(s) 49, 1078, 1218, 1221, 1224
BlsI GCNGC 5 cut(s) 50, 1079, 1219, 1222, 1225
Bme1390I CCNGG 3 cut(s) 340, 795, 1055
Bme18I GGWCC 1 cut(s) 668
BmgBI CACGTC 1 cut(s) 310
BmgT120I GGNCC 3 cut(s) 342, 668, 910
BmiI GGNNCC 4 cut(s) 286, 361, 613, 911
BmrFI CCNGG 3 cut(s) 340, 795, 1055
BmsI GCATC 2 cut(s) 593, 1150
BpiI GAAGAC 1 cut(s) 304
BplI GAGNNNNNCTC 2 cut(s) 1025, 1057
BpmI CTGGAG 1 cut(s) 609
Bpu10I CCTNAGC 1 cut(s) 44
BsaHI GRCGYC 1 cut(s) 294
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 5 cut(s) 578, 793, 1054, 1164, 1227
Bsc4I CCNNNNNNNGG 2 cut(s) 196, 1170
Bse118I RCCGGY 2 cut(s) 281, 608
Bse1I ACTGG 1 cut(s) 827
Bse21I CCTNAGG 1 cut(s) 333
Bse3DI GCAATG 1 cut(s) 6
BseBI CCWGG 3 cut(s) 340, 795, 1055
BseDI CCNNGG 5 cut(s) 578, 793, 1054, 1164, 1227
BseGI GGATG 1 cut(s) 1165
BseLI CCNNNNNNNGG 2 cut(s) 196, 1170
BseMI GCAATG 1 cut(s) 6
BseMII CTCAG 3 cut(s) 324, 459, 1056
BseNI ACTGG 1 cut(s) 827
BseRI GAGGAG 4 cut(s) 159, 162, 710, 1007
BseSI GKGCMC 1 cut(s) 634
BseXI GCAGC 5 cut(s) 60, 1064, 1207, 1229, 1235
BseYI CCCAGC 1 cut(s) 770
Bsh1236I CGCG 2 cut(s) 351, 459
Bsh1285I CGRYCG 1 cut(s) 304
BshFI GGCC 7 cut(s) 200, 338, 343, 759, 819, 912, 1259
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 304
BsiHKAI GWGCWC 1 cut(s) 634
BsiSI CCGG 2 cut(s) 282, 609
BslFI GGGAC 1 cut(s) 24
BslI CCNNNNNNNGG 2 cut(s) 196, 1170
BsmAI GTCTC 1 cut(s) 263
BsmFI GGGAC 1 cut(s) 24
BsnI GGCC 7 cut(s) 200, 338, 343, 759, 819, 912, 1259
Bso31I GGTCTC 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 362, 634
Bsp143I GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
Bsp19I CCATGG 1 cut(s) 578
BspACI CCGC 3 cut(s) 225, 304, 374
BspANI GGCC 7 cut(s) 200, 338, 343, 759, 819, 912, 1259
BspCNI CTCAG 3 cut(s) 325, 460, 1055
BspFNI CGCG 2 cut(s) 351, 459
BspLI GGNNCC 4 cut(s) 286, 361, 613, 911
BspMAI CTGCAG 1 cut(s) 1225
BspPI GGATC 1 cut(s) 365
BspT107I GGYRCC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 263
BsrDI GCAATG 1 cut(s) 6
BsrFI RCCGGY 2 cut(s) 281, 608
BsrI ACTGG 1 cut(s) 827
BssAI RCCGGY 2 cut(s) 281, 608
BssECI CCNNGG 5 cut(s) 578, 793, 1054, 1164, 1227
BssMI GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 2 cut(s) 578, 1164
Bst2UI CCWGG 3 cut(s) 340, 795, 1055
Bst4CI ACNGT 5 cut(s) 38, 289, 445, 1106, 1249
BstACI GRCGYC 1 cut(s) 294
BstC8I GCNNGC 4 cut(s) 225, 279, 409, 1172
BstDEI CTNAG 5 cut(s) 44, 333, 381, 468, 1042
BstDSI CCRYGG 2 cut(s) 578, 1227
BstENI CCTNNNNNAGG 1 cut(s) 1168
BstF5I GGATG 1 cut(s) 1165
BstFNI CGCG 2 cut(s) 351, 459
BstHHI GCGC 2 cut(s) 6, 13
BstKTI GATC 7 cut(s) 257, 373, 510, 649, 868, 891, 1188
BstMAI GTCTC 1 cut(s) 263
BstMBI GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
BstMCI CGRYCG 1 cut(s) 304
BstMWI GCNNNNNNNGC 7 cut(s) 10, 357, 404, 859, 868, 1223, 1250
BstNI CCWGG 3 cut(s) 340, 795, 1055
BstNSI RCATGY 2 cut(s) 1077, 1149
BstSCI CCNGG 3 cut(s) 338, 793, 1053
BstSFI CTRYAG 3 cut(s) 787, 1221, 1261
BstSLI GKGCMC 1 cut(s) 634
BstUI CGCG 2 cut(s) 351, 459
BstV1I GCAGC 5 cut(s) 60, 1064, 1207, 1229, 1235
BstV2I GAAGAC 1 cut(s) 304
BstXI CCANNNNNNTGG 2 cut(s) 827, 1010
Bsu36I CCTNAGG 1 cut(s) 333
BsuRI GGCC 7 cut(s) 200, 338, 343, 759, 819, 912, 1259
BtgI CCRYGG 2 cut(s) 578, 1227
BtgZI GCGATG 2 cut(s) 406, 498
BtrI CACGTC 1 cut(s) 310
BtsCI GGATG 1 cut(s) 1165
BtsI GCAGTG 1 cut(s) 1245
BtsIMutI CAGTG 4 cut(s) 820, 1111, 1245, 1254
Cac8I GCNNGC 4 cut(s) 225, 279, 409, 1172
CaiI CAGNNNCTG 1 cut(s) 1253
CfoI GCGC 2 cut(s) 6, 13
Cfr10I RCCGGY 2 cut(s) 281, 608
Cfr13I GGNCC 3 cut(s) 342, 668, 910
CseI GACGC 3 cut(s) 302, 340, 465
Csp6I GTAC 3 cut(s) 241, 265, 285
CviAII CATG 6 cut(s) 579, 596, 617, 635, 1074, 1146
CviQI GTAC 3 cut(s) 241, 265, 285
DdeI CTNAG 5 cut(s) 44, 333, 381, 468, 1042
DpnI GATC 7 cut(s) 256, 372, 509, 648, 867, 890, 1187
DpnII GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
DrdI GACNNNNNNGTC 2 cut(s) 36, 308
DseDI GACNNNNNNGTC 2 cut(s) 36, 308
Eco130I CCWWGG 2 cut(s) 578, 1164
Eco147I AGGCCT 1 cut(s) 338
Eco24I GRGCYC 1 cut(s) 362
Eco31I GGTCTC 1 cut(s) 263
Eco47I GGWCC 1 cut(s) 668
Eco57I CTGAAG 1 cut(s) 951
Eco81I CCTNAGG 1 cut(s) 333
EcoNI CCTNNNNNAGG 1 cut(s) 1168
EcoRII CCWGG 3 cut(s) 338, 793, 1053
EcoT14I CCWWGG 2 cut(s) 578, 1164
EcoT38I GRGCYC 1 cut(s) 362
ErhI CCWWGG 2 cut(s) 578, 1164
FaeI CATG 6 cut(s) 582, 599, 620, 638, 1077, 1149
FalI AAGNNNNNCTT 4 cut(s) 230, 262, 1148, 1180
FaqI GGGAC 1 cut(s) 24
FatI CATG 6 cut(s) 578, 595, 616, 634, 1073, 1145
FauI CCCGC 1 cut(s) 232
FbaI TGATCA 2 cut(s) 507, 865
Fnu4HI GCNGC 5 cut(s) 49, 1078, 1218, 1221, 1224
FokI GGATG 1 cut(s) 1172
FriOI GRGCYC 1 cut(s) 362
Fsp4HI GCNGC 5 cut(s) 49, 1078, 1218, 1221, 1224
FspAI RTGCGCAY 1 cut(s) 5
FspBI CTAG 1 cut(s) 144
FspI TGCGCA 2 cut(s) 5, 12
GlaI GCGC 2 cut(s) 5, 12
GluI GCNGC 5 cut(s) 49, 1078, 1218, 1221, 1224
GsaI CCCAGC 1 cut(s) 774
GsuI CTGGAG 1 cut(s) 609
HaeIII GGCC 7 cut(s) 200, 338, 343, 759, 819, 912, 1259
HapII CCGG 2 cut(s) 282, 609
HgaI GACGC 3 cut(s) 302, 340, 465
HhaI GCGC 2 cut(s) 6, 13
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 6 cut(s) 582, 599, 620, 638, 1077, 1149
Hin6I GCGC 2 cut(s) 4, 11
HinP1I GCGC 2 cut(s) 4, 11
HincII GTYRAC 2 cut(s) 292, 606
HindII GTYRAC 2 cut(s) 292, 606
HinfI GANTC 4 cut(s) 365, 530, 807, 1021
HpaII CCGG 2 cut(s) 282, 609
HphI GGTGA 1 cut(s) 950
Hpy166II GTNNAC 4 cut(s) 292, 606, 632, 668
Hpy188III TCNNGA 3 cut(s) 250, 588, 644
Hpy8I GTNNAC 4 cut(s) 292, 606, 632, 668
Hpy99I CGWCG 1 cut(s) 356
HpyAV CCTTC 6 cut(s) 164, 446, 455, 929, 1150, 1269
HpyCH4III ACNGT 5 cut(s) 38, 289, 445, 1106, 1249
HpyCH4IV ACGT 2 cut(s) 309, 834
HpyCH4V TGCA 5 cut(s) 595, 632, 1080, 1217, 1223
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 357, 404, 859, 868, 1223, 1250
HpyF3I CTNAG 5 cut(s) 44, 333, 381, 468, 1042
HpySE526I ACGT 2 cut(s) 309, 834
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 6 cut(s) 582, 599, 620, 638, 1077, 1149
HspAI GCGC 2 cut(s) 4, 11
KpnI GGTACC 1 cut(s) 288
Ksp22I TGATCA 2 cut(s) 507, 865
Kzo9I GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
LmnI GCTCC 7 cut(s) 168, 365, 617, 966, 1096, 1198, 1235
Lsp1109I GCAGC 5 cut(s) 60, 1064, 1207, 1229, 1235
LweI GCATC 2 cut(s) 593, 1150
MaeI CTAG 1 cut(s) 144
MaeII ACGT 2 cut(s) 309, 834
MaeIII GTNAC 2 cut(s) 67, 835
MalI GATC 7 cut(s) 256, 372, 509, 648, 867, 890, 1187
MboI GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
MboII GAAGA 8 cut(s) 123, 242, 304, 379, 663, 918, 944, 986
MhlI GDGCHC 2 cut(s) 362, 634
MluCI AATT 3 cut(s) 704, 857, 945
MlyI GAGTC 2 cut(s) 374, 539
MmeI TCCRAC 1 cut(s) 1213
MseI TTAA 3 cut(s) 62, 429, 948
MslI CAYNNNNRTG 2 cut(s) 765, 825
MspA1I CMGCKG 1 cut(s) 1220
MspI CCGG 2 cut(s) 282, 609
MspR9I CCNGG 3 cut(s) 340, 795, 1055
MvaI CCWGG 3 cut(s) 340, 795, 1055
MvnI CGCG 2 cut(s) 351, 459
MwoI GCNNNNNNNGC 7 cut(s) 10, 357, 404, 859, 868, 1223, 1250
NcoI CCATGG 1 cut(s) 578
NdeII GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
NlaIII CATG 6 cut(s) 582, 599, 620, 638, 1077, 1149
NlaIV GGNNCC 4 cut(s) 286, 361, 613, 911
NmuCI GTSAC 2 cut(s) 67, 835
NsbI TGCGCA 2 cut(s) 5, 12
NspI RCATGY 2 cut(s) 1077, 1149
PceI AGGCCT 1 cut(s) 338
PcsI WCGNNNNNNNCGW 4 cut(s) 181, 285, 306, 360
PfeI GAWTC 2 cut(s) 807, 1021
PkrI GCNGC 5 cut(s) 50, 1079, 1219, 1222, 1225
PleI GAGTC 2 cut(s) 373, 538
PpsI GAGTC 2 cut(s) 373, 538
PshBI ATTAAT 2 cut(s) 62, 948
Psp6I CCWGG 3 cut(s) 338, 793, 1053
PspFI CCCAGC 1 cut(s) 770
PspGI CCWGG 3 cut(s) 338, 793, 1053
PspN4I GGNNCC 4 cut(s) 286, 361, 613, 911
PspPI GGNCC 3 cut(s) 342, 668, 910
PstI CTGCAG 1 cut(s) 1225
PstNI CAGNNNCTG 1 cut(s) 1253
PvuII CAGCTG 1 cut(s) 1220
RsaI GTAC 3 cut(s) 242, 266, 286
RsaNI GTAC 3 cut(s) 241, 265, 285
RseI CAYNNNNRTG 2 cut(s) 765, 825
SaqAI TTAA 3 cut(s) 62, 429, 948
SatI GCNGC 5 cut(s) 49, 1078, 1218, 1221, 1224
Sau3AI GATC 7 cut(s) 254, 370, 507, 646, 865, 888, 1185
Sau96I GGNCC 3 cut(s) 342, 668, 910
SchI GAGTC 2 cut(s) 374, 539
ScrFI CCNGG 3 cut(s) 340, 795, 1055
SduI GDGCHC 2 cut(s) 362, 634
SfaNI GCATC 2 cut(s) 593, 1150
SfcI CTRYAG 3 cut(s) 787, 1221, 1261
SinI GGWCC 1 cut(s) 668
SmiMI CAYNNNNRTG 2 cut(s) 765, 825
Sse9I AATT 3 cut(s) 704, 857, 945
SseBI AGGCCT 1 cut(s) 338
SsiI CCGC 3 cut(s) 225, 304, 374
SspMI CTAG 1 cut(s) 144
StuI AGGCCT 1 cut(s) 338
StyD4I CCNGG 3 cut(s) 338, 793, 1053
StyI CCWWGG 2 cut(s) 578, 1164
TaaI ACNGT 5 cut(s) 38, 289, 445, 1106, 1249
TaiI ACGT 2 cut(s) 312, 837
TaqI TCGA 3 cut(s) 354, 643, 649
TasI AATT 3 cut(s) 704, 857, 945
TfiI GAWTC 2 cut(s) 807, 1021
Tru1I TTAA 3 cut(s) 62, 429, 948
Tru9I TTAA 3 cut(s) 62, 429, 948
TscAI CASTG 4 cut(s) 827, 1111, 1245, 1254
TseFI GTSAC 2 cut(s) 67, 835
TseI GCWGC 5 cut(s) 48, 1077, 1217, 1220, 1223
Tsp45I GTSAC 2 cut(s) 67, 835
TspRI CASTG 4 cut(s) 827, 1111, 1245, 1254
VneI GTGCAC 1 cut(s) 630
VpaK11BI GGWCC 1 cut(s) 668
VspI ATTAAT 2 cut(s) 62, 948
XagI CCTNNNNNAGG 1 cut(s) 1168
XceI RCATGY 2 cut(s) 1077, 1149
XcmI CCANNNNNNNNNTGG 2 cut(s) 767, 1061
XspI CTAG 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.