pycom17g02140

Altered inheritance of mitochondria protein 32-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0001205
Physical Location & Seq
Reverse (-)
1346261 .. 1348538
2278 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g02140.2

Sequence Viewer

Length: 945 bp
ATGCGCACTGCGCACCTACACCTATACCGCACTGCGCACCTACGCCCATACCGACACCACCGTTCCCTCCTCAGCCTCCTCATATTATCAACACCAACAACCAAACAACAACGCTCTTTCTCTCTCATCTTTTCCCTCTCTACTCCTCCAACTTCAACCCTCTCAAAACCCCTTCCTCCTCCGCCTCCTCGAACTGTAGCAATGGCCTCCGACGACCTCGCCGCCGCCGTTCCCGCGGCAGAAGACGAGACGTACGGTTTCAAGAGATCGGAGATGTTCAAGGAAAAGCTTGTCGGCACAGTCAACGCCTACGACCGCCACGTCTTCCTCTGCTACAAGAGCCCCGAGGCCTGGCCGTCGCGCGTCGAAGGCTCTGAGTCCGATCCGCTCCCTAAGTTCTTCGCCTCCGCTCTCAAAGCTCGCAAGAACGACATCGCCGTTAAGACGTTGCTGACAGTAATTGAAGGACGCGAAGGAACTGAGTTTTCCGACGGCGATGTGTTGATTTTCCCGCAAATGATCAAATACAAGGGCTTGAAAGAGTCGGATGTGGACAACTTTGTTGACGATGTCCTTGTGAATGATAAACCATGGGCTTCTGGAGTGCAAGAGGCATTGACTGGCTCCCATGTATTTGTATGTGCACATGGTAGTCGAGATAAAAGATGTGGTGTTTGTGGACCTGTTCTGATTGATAAGTTCAAAGAGGAGACTGAGTTGCGAGGACTGACGAATCAGGTGTTTGTTATTCCTTGCTCTCACATTGGAGGCCACAAGTATGCTGGAAACTTGATTATTTACAGCCCAGGTTCACATGGAAGCATAACAGGCCACTGGTATGGCTACGTCACTCCTGATGATGTGCCGGAATTGCTTGATCGAGCATATTGGGAAGGGAGAGATCATAGAGCGACTTTGGAGGGGCCAAATGGGAGCATCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Suc_Fer-like

Protein Analysis

315

Amino Acids

34.88

Weight (kDa)

6.89

Isoelectric Point (pI)

31.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
Acc16I TGCGCA 3 cut(s) 5, 12, 36
AccBSI CCGCTC 2 cut(s) 388, 410
AccII CGCG 4 cut(s) 236, 361, 363, 471
AclWI GGATC 1 cut(s) 377
AcoI YGGCCR 1 cut(s) 353
AfaI GTAC 1 cut(s) 254
AfiI CCNNNNNNNGG 1 cut(s) 351
AgsI TTSAA 6 cut(s) 156, 262, 280, 464, 538, 703
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 2 cut(s) 350, 805
AluBI AGCT 2 cut(s) 289, 419
AluI AGCT 2 cut(s) 289, 419
Alw21I GWGCWC 1 cut(s) 646
Alw26I GTCTC 2 cut(s) 242, 704
Alw44I GTGCAC 1 cut(s) 642
AlwI GGATC 1 cut(s) 377
Ama87I CYCGRG 1 cut(s) 344
AoxI GGCC 6 cut(s) 204, 348, 353, 769, 829, 923
ApaLI GTGCAC 1 cut(s) 642
AspLEI GCGC 4 cut(s) 6, 13, 37, 363
AspS9I GGNCC 2 cut(s) 680, 923
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 1 cut(s) 680
BaeGI GKGCMC 1 cut(s) 646
BanII GRGCYC 1 cut(s) 344
BbsI GAAGAC 2 cut(s) 249, 316
Bbv12I GWGCWC 1 cut(s) 646
BbvCI CCTCAGC 1 cut(s) 71
BceAI ACGGC 4 cut(s) 212, 340, 422, 508
BciT130I CCWGG 2 cut(s) 352, 807
BclI TGATCA 1 cut(s) 519
BcoDI GTCTC 2 cut(s) 242, 704
BfmI CTRYAG 1 cut(s) 195
BisI GCNGC 3 cut(s) 222, 225, 237
BlsI GCNGC 3 cut(s) 223, 226, 238
Bme1390I CCNGG 2 cut(s) 352, 807
Bme18I GGWCC 1 cut(s) 680
BmeT110I CYCGRG 1 cut(s) 344
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 2 cut(s) 680, 923
BmiI GGNNCC 2 cut(s) 625, 924
BmrFI CCNGG 2 cut(s) 352, 807
BpiI GAAGAC 2 cut(s) 249, 316
BpmI CTGGAG 1 cut(s) 621
Bpu10I CCTNAGC 1 cut(s) 71
BsaJI CCNNGG 4 cut(s) 234, 345, 590, 805
BsaXI ACNNNNNCTCC 2 cut(s) 701, 731
Bsc4I CCNNNNNNNGG 1 cut(s) 351
Bse1I ACTGG 2 cut(s) 625, 839
Bse3DI GCAATG 1 cut(s) 207
BseBI CCWGG 2 cut(s) 352, 807
BseDI CCNNGG 4 cut(s) 234, 345, 590, 805
BseGI GGATG 1 cut(s) 553
BseLI CCNNNNNNNGG 1 cut(s) 351
BseMI GCAATG 1 cut(s) 207
BseMII CTCAG 4 cut(s) 85, 366, 471, 705
BseNI ACTGG 2 cut(s) 625, 839
BseRI GAGGAG 6 cut(s) 59, 68, 135, 168, 177, 722
BseSI GKGCMC 1 cut(s) 646
Bsh1236I CGCG 4 cut(s) 236, 361, 363, 471
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 6 cut(s) 206, 350, 355, 771, 831, 925
BsiEI CGRYCG 1 cut(s) 316
BsiHKAI GWGCWC 1 cut(s) 646
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 1 cut(s) 866
BsiWI CGTACG 1 cut(s) 252
BslI CCNNNNNNNGG 1 cut(s) 351
BsmAI GTCTC 2 cut(s) 242, 704
BsmBI CGTCTC 1 cut(s) 242
BsnI GGCC 6 cut(s) 206, 350, 355, 771, 831, 925
BsoBI CYCGRG 1 cut(s) 344
Bsp1286I GDGCHC 2 cut(s) 344, 646
Bsp143I GATC 5 cut(s) 266, 382, 519, 877, 901
Bsp19I CCATGG 1 cut(s) 590
BspANI GGCC 6 cut(s) 206, 350, 355, 771, 831, 925
BspCNI CTCAG 4 cut(s) 84, 367, 472, 706
BspFNI CGCG 4 cut(s) 236, 361, 363, 471
BspLI GGNNCC 2 cut(s) 625, 924
BspPI GGATC 1 cut(s) 377
BsrBI CCGCTC 2 cut(s) 388, 410
BsrDI GCAATG 1 cut(s) 207
BsrI ACTGG 2 cut(s) 625, 839
BssECI CCNNGG 4 cut(s) 234, 345, 590, 805
BssMI GATC 5 cut(s) 266, 382, 519, 877, 901
BssT1I CCWWGG 1 cut(s) 590
Bst2UI CCWGG 2 cut(s) 352, 807
Bst4CI ACNGT 5 cut(s) 62, 196, 257, 301, 457
BstC8I GCNNGC 1 cut(s) 421
BstDEI CTNAG 5 cut(s) 71, 375, 393, 480, 714
BstDSI CCRYGG 2 cut(s) 234, 590
BstF5I GGATG 1 cut(s) 553
BstFNI CGCG 4 cut(s) 236, 361, 363, 471
BstHHI GCGC 4 cut(s) 6, 13, 37, 363
BstKTI GATC 5 cut(s) 269, 385, 522, 880, 904
BstMAI GTCTC 2 cut(s) 242, 704
BstMBI GATC 5 cut(s) 266, 382, 519, 877, 901
BstMCI CGRYCG 1 cut(s) 316
BstMWI GCNNNNNNNGC 7 cut(s) 10, 233, 339, 369, 416, 828, 871
BstNI CCWGG 2 cut(s) 352, 807
BstSCI CCNGG 2 cut(s) 350, 805
BstSFI CTRYAG 1 cut(s) 195
BstSLI GKGCMC 1 cut(s) 646
BstUI CGCG 4 cut(s) 236, 361, 363, 471
BstV2I GAAGAC 2 cut(s) 249, 316
BstXI CCANNNNNNTGG 1 cut(s) 839
BsuRI GGCC 6 cut(s) 206, 350, 355, 771, 831, 925
BtgI CCRYGG 2 cut(s) 234, 590
BtgZI GCGATG 2 cut(s) 418, 510
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 1 cut(s) 553
BtsI GCAGTG 2 cut(s) 6, 30
BtsIMutI CAGTG 3 cut(s) 6, 30, 832
Cac8I GCNNGC 1 cut(s) 421
CfoI GCGC 4 cut(s) 6, 13, 37, 363
Cfr13I GGNCC 2 cut(s) 680, 923
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 2 cut(s) 352, 477
Csp6I GTAC 1 cut(s) 253
CviAII CATG 4 cut(s) 591, 629, 647, 815
CviQI GTAC 1 cut(s) 253
DdeI CTNAG 5 cut(s) 71, 375, 393, 480, 714
DpnI GATC 5 cut(s) 268, 384, 521, 879, 903
DpnII GATC 5 cut(s) 266, 382, 519, 877, 901
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 1 cut(s) 353
EciI GGCGGA 1 cut(s) 171
Eco130I CCWWGG 1 cut(s) 590
Eco147I AGGCCT 1 cut(s) 350
Eco24I GRGCYC 1 cut(s) 344
Eco47I GGWCC 1 cut(s) 680
Eco88I CYCGRG 1 cut(s) 344
EcoRII CCWGG 2 cut(s) 350, 805
EcoT14I CCWWGG 1 cut(s) 590
EcoT38I GRGCYC 1 cut(s) 344
ErhI CCWWGG 1 cut(s) 590
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 4 cut(s) 594, 632, 650, 818
FatI CATG 4 cut(s) 590, 628, 646, 814
FauI CCCGC 2 cut(s) 241, 519
FbaI TGATCA 1 cut(s) 519
Fnu4HI GCNGC 3 cut(s) 222, 225, 237
FokI GGATG 1 cut(s) 560
FriOI GRGCYC 1 cut(s) 344
Fsp4HI GCNGC 3 cut(s) 222, 225, 237
FspAI RTGCGCAY 1 cut(s) 5
FspI TGCGCA 3 cut(s) 5, 12, 36
GlaI GCGC 4 cut(s) 5, 12, 36, 362
GluI GCNGC 3 cut(s) 222, 225, 237
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 6 cut(s) 206, 350, 355, 771, 831, 925
HapII CCGG 1 cut(s) 866
HgaI GACGC 2 cut(s) 352, 477
HhaI GCGC 4 cut(s) 6, 13, 37, 363
Hin1II CATG 4 cut(s) 594, 632, 650, 818
Hin6I GCGC 4 cut(s) 4, 11, 35, 361
HinP1I GCGC 4 cut(s) 4, 11, 35, 361
HincII GTYRAC 2 cut(s) 304, 565
HindII GTYRAC 2 cut(s) 304, 565
HindIII AAGCTT 1 cut(s) 287
HinfI GANTC 3 cut(s) 377, 542, 733
HpaII CCGG 1 cut(s) 866
Hpy166II GTNNAC 6 cut(s) 304, 553, 565, 644, 680, 812
Hpy188I TCNGA 8 cut(s) 211, 271, 376, 382, 490, 547, 690, 944
Hpy188III TCNNGA 4 cut(s) 262, 600, 656, 854
Hpy8I GTNNAC 6 cut(s) 304, 553, 565, 644, 680, 812
Hpy99I CGWCG 4 cut(s) 215, 361, 368, 494
HpyAV CCTTC 5 cut(s) 182, 362, 458, 467, 887
HpyCH4III ACNGT 5 cut(s) 62, 196, 257, 301, 457
HpyCH4IV ACGT 4 cut(s) 251, 321, 446, 846
HpyCH4V TGCA 2 cut(s) 607, 644
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 233, 339, 369, 416, 828, 871
HpyF3I CTNAG 5 cut(s) 71, 375, 393, 480, 714
HpySE526I ACGT 4 cut(s) 251, 321, 446, 846
Hsp92II CATG 4 cut(s) 594, 632, 650, 818
HspAI GCGC 4 cut(s) 4, 11, 35, 361
Ksp22I TGATCA 1 cut(s) 519
KspI CCGCGG 1 cut(s) 237
Kzo9I GATC 5 cut(s) 266, 382, 519, 877, 901
LmnI GCTCC 3 cut(s) 393, 629, 933
MaeII ACGT 4 cut(s) 251, 321, 446, 846
MaeIII GTNAC 1 cut(s) 847
MalI GATC 5 cut(s) 268, 384, 521, 879, 903
MbiI CCGCTC 2 cut(s) 388, 410
MboI GATC 5 cut(s) 266, 382, 519, 877, 901
MboII GAAGA 4 cut(s) 254, 316, 391, 931
MhlI GDGCHC 2 cut(s) 344, 646
MluCI AATT 2 cut(s) 459, 869
MlyI GAGTC 2 cut(s) 386, 551
MmeI TCCRAC 4 cut(s) 173, 234, 513, 525
MseI TTAA 1 cut(s) 441
MslI CAYNNNNRTG 2 cut(s) 777, 837
MspA1I CMGCKG 1 cut(s) 236
MspI CCGG 1 cut(s) 866
MspR9I CCNGG 2 cut(s) 352, 807
MvaI CCWGG 2 cut(s) 352, 807
MvnI CGCG 4 cut(s) 236, 361, 363, 471
MwoI GCNNNNNNNGC 7 cut(s) 10, 233, 339, 369, 416, 828, 871
NcoI CCATGG 1 cut(s) 590
NdeII GATC 5 cut(s) 266, 382, 519, 877, 901
NlaIII CATG 4 cut(s) 594, 632, 650, 818
NlaIV GGNNCC 2 cut(s) 625, 924
NmuCI GTSAC 1 cut(s) 847
NsbI TGCGCA 3 cut(s) 5, 12, 36
PceI AGGCCT 1 cut(s) 350
PcsI WCGNNNNNNNCGW 4 cut(s) 49, 225, 318, 435
PfeI GAWTC 1 cut(s) 733
Pfl23II CGTACG 1 cut(s) 252
PflFI GACNNNGTC 1 cut(s) 569
PkrI GCNGC 3 cut(s) 223, 226, 238
PleI GAGTC 2 cut(s) 385, 550
PpsI GAGTC 2 cut(s) 385, 550
Psp6I CCWGG 2 cut(s) 350, 805
PspGI CCWGG 2 cut(s) 350, 805
PspLI CGTACG 1 cut(s) 252
PspN4I GGNNCC 2 cut(s) 625, 924
PspPI GGNCC 2 cut(s) 680, 923
PsyI GACNNNGTC 1 cut(s) 569
RsaI GTAC 1 cut(s) 254
RsaNI GTAC 1 cut(s) 253
RseI CAYNNNNRTG 2 cut(s) 777, 837
SacII CCGCGG 1 cut(s) 237
SaqAI TTAA 1 cut(s) 441
SatI GCNGC 3 cut(s) 222, 225, 237
Sau3AI GATC 5 cut(s) 266, 382, 519, 877, 901
Sau96I GGNCC 2 cut(s) 680, 923
SchI GAGTC 2 cut(s) 386, 551
ScrFI CCNGG 2 cut(s) 352, 807
SduI GDGCHC 2 cut(s) 344, 646
SfcI CTRYAG 1 cut(s) 195
Sfr303I CCGCGG 1 cut(s) 237
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 1 cut(s) 680
SmiMI CAYNNNNRTG 2 cut(s) 777, 837
Sse9I AATT 2 cut(s) 459, 869
SseBI AGGCCT 1 cut(s) 350
StuI AGGCCT 1 cut(s) 350
StyD4I CCNGG 2 cut(s) 350, 805
StyI CCWWGG 1 cut(s) 590
TaaI ACNGT 5 cut(s) 62, 196, 257, 301, 457
TaiI ACGT 4 cut(s) 254, 324, 449, 849
TaqI TCGA 4 cut(s) 190, 366, 655, 880
TasI AATT 2 cut(s) 459, 869
TauI GCSGC 3 cut(s) 224, 227, 239
TfiI GAWTC 1 cut(s) 733
Tru1I TTAA 1 cut(s) 441
Tru9I TTAA 1 cut(s) 441
TscAI CASTG 3 cut(s) 13, 37, 839
TseFI GTSAC 1 cut(s) 847
Tsp45I GTSAC 1 cut(s) 847
TspRI CASTG 3 cut(s) 13, 37, 839
Tth111I GACNNNGTC 1 cut(s) 569
VneI GTGCAC 1 cut(s) 642
VpaK11BI GGWCC 1 cut(s) 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.