MD17G1026300.v1.1

Altered inheritance of mitochondria protein 32-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001205
Physical Location & Seq
Reverse (-)
1888966 .. 1892147
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1026300.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGCGCACTGCGCACCTACACCCATACCGCACTGCGCACCTACGCCCATACCGACACCACCGTTCCCTCCTCAGCCTCCTCATATTATCAACACCAACAACCAAACAACAACGCTCTTTCTCTCTCATCTTTTCCCTCTCTACTCCTTCGACTTCAACCCTCTCTAAACCCCTTCCTCCTCCGCCTCCACCTCCTCGAACTGTAGCAATGGCCTCCGACGACCTCGCCGCCGCCGTTCCCGCCGCAGAAGACGAGACGTATGGTTTCAAGAGATCGGAGATGTTCAAGGAAAAGCTTGCCGGCACCGTCAACGCCTACGACCGCCACGTCTTCCTCTGCTACAAGAGTCCCGAGGCCTGGCCGTCGCGCGTCGAAGGCTCTGAGTCCGATCCGCTCCCTAAGTTCTTCGCCTCCGCTCTCAAAGCTCGCAAGAACGACATCGCCTTTAAGACGTTGCTGACAGTAATTGAAGGACGCGAAGGAACTGAGTTTTCCGACGGTGATGTGTTGATTTTCCCACAAATGATCAAATACAAGGGCTTGAAAGAGTCGGATGTGGACAACTTTGTTGACGATGTCCTTGTGAATGATAAACCATGGGCTTCTGGAGTGCAAGAGGCCTTGACTGGCTCCCATGTATTTGTATGTGCACATGGTAGTCGAGATAAAAGGTGTGGTGTTTGTGGACCTGTTCTGATTGATAAGTTCAAAGAGGAGACTGAGTTGCGAGGACTGTCGAATCAGGTGTTTGTTATTCCTTGCTCTCACATTGGAGGCCACAAGTATGCTGGAAACTTGATTATTTACAGCCCAGGTTCAGATGGAAGCATAACAGGCCATTGGTATGGCTACGTCACTCCTGATGATGTGCCAGAATTGCTTGATCAGCATATTGGGAAGGGAGAGATCATAGAGCGACTTTGGAGGGGCCAAATGGGTGCATCTTCTGATGAAGCTGAAAAAATTAATGGCCAGAAGCTTCCAAATGGAGGAGAAAGTAAGAAAATCAAGGAGAAGCCCCAAGAAAATGGCAACCAAACTCACCAAGAAAACGTCAATCAGATTCAGAGTAATGAGAACTTTTCAGGCTGTTGCCAGGGTGCTGATAGTAATGGATTTACATGCTGCCAAGAAGTAAGTTTGGAGCAAAAAGGTGGAAGTGAGGAAAAGAAGCTGAAAGAGACCACAAAGGCGTGTGCCAGGAGGGATGCCTCGGGGAAGCTGTCAAGCTTGATCGGGAAATGGGAGCAAAGTGATGTTCTTGCAGCTGCTGCGGTGGTTGGAGCAGTGGCAACAGTGGCTGTGGCCTACAGCTTTTATAGAAGGTCAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Suc_Fer-like

Protein Analysis

445

Amino Acids

48.63

Weight (kDa)

6.9

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Suc_Fer-like PF06999 99 - 310 3.5e-48 Sucrase/ferredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 326
Acc16I TGCGCA 3 cut(s) 5, 12, 36
AccB1I GGYRCC 1 cut(s) 302
AccBSI CCGCTC 2 cut(s) 394, 416
AccII CGCG 3 cut(s) 367, 369, 477
AclWI GGATC 1 cut(s) 383
AcoI YGGCCR 2 cut(s) 359, 970
AfiI CCNNNNNNNGG 2 cut(s) 357, 989
AgsI TTSAA 6 cut(s) 156, 268, 286, 470, 544, 709
AjiI CACGTC 1 cut(s) 328
AjnI CCWGG 4 cut(s) 356, 811, 1095, 1199
AluBI AGCT 9 cut(s) 295, 425, 956, 979, 1174, 1222, 1230, 1268, 1314
AluI AGCT 9 cut(s) 295, 425, 956, 979, 1174, 1222, 1230, 1268, 1314
Alw21I GWGCWC 1 cut(s) 652
Alw26I GTCTC 3 cut(s) 248, 710, 1175
Alw44I GTGCAC 1 cut(s) 648
AlwI GGATC 1 cut(s) 383
AlwNI CAGNNNCTG 2 cut(s) 1271, 1301
Ama87I CYCGRG 2 cut(s) 350, 1213
AoxI GGCC 9 cut(s) 210, 354, 359, 618, 775, 835, 928, 970, 1305
ApaLI GTGCAC 1 cut(s) 648
ApeKI GCWGC 4 cut(s) 1125, 1265, 1268, 1271
AseI ATTAAT 1 cut(s) 966
AspLEI GCGC 4 cut(s) 6, 13, 37, 369
AspS9I GGNCC 2 cut(s) 686, 928
AsuHPI GGTGA 2 cut(s) 512, 1034
AvaI CYCGRG 2 cut(s) 350, 1213
AvaII GGWCC 1 cut(s) 686
BaeGI GKGCMC 1 cut(s) 652
BalI TGGCCA 1 cut(s) 972
BanI GGYRCC 1 cut(s) 302
BbsI GAAGAC 2 cut(s) 255, 322
Bbv12I GWGCWC 1 cut(s) 652
BbvCI CCTCAGC 1 cut(s) 71
BbvI GCAGC 4 cut(s) 1112, 1255, 1258, 1277
BccI CCATC 1 cut(s) 815
BceAI ACGGC 2 cut(s) 218, 346
BciT130I CCWGG 4 cut(s) 358, 813, 1097, 1201
BclI TGATCA 2 cut(s) 525, 883
BcoDI GTCTC 3 cut(s) 248, 710, 1175
BfmI CTRYAG 2 cut(s) 201, 1309
BisI GCNGC 7 cut(s) 228, 231, 243, 1126, 1266, 1269, 1272
BlsI GCNGC 7 cut(s) 229, 232, 244, 1127, 1267, 1270, 1273
Bme1390I CCNGG 4 cut(s) 358, 813, 1097, 1201
Bme18I GGWCC 1 cut(s) 686
BmeT110I CYCGRG 2 cut(s) 350, 1213
BmgBI CACGTC 1 cut(s) 328
BmgT120I GGNCC 2 cut(s) 686, 928
BmiI GGNNCC 3 cut(s) 304, 631, 929
BmrFI CCNGG 4 cut(s) 358, 813, 1097, 1201
BmsI GCATC 2 cut(s) 950, 1198
BpiI GAAGAC 2 cut(s) 255, 322
BpmI CTGGAG 1 cut(s) 627
Bpu10I CCTNAGC 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 1175
BsaJI CCNNGG 5 cut(s) 351, 596, 811, 1096, 1212
BsaXI ACNNNNNCTCC 2 cut(s) 707, 737
Bsc4I CCNNNNNNNGG 2 cut(s) 357, 989
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 1 cut(s) 631
Bse3DI GCAATG 1 cut(s) 213
BseBI CCWGG 4 cut(s) 358, 813, 1097, 1201
BseDI CCNNGG 5 cut(s) 351, 596, 811, 1096, 1212
BseGI GGATG 2 cut(s) 559, 1213
BseLI CCNNNNNNNGG 2 cut(s) 357, 989
BseMI GCAATG 1 cut(s) 213
BseMII CTCAG 4 cut(s) 85, 372, 477, 711
BseNI ACTGG 1 cut(s) 631
BseRI GAGGAG 6 cut(s) 59, 68, 168, 183, 728, 1005
BseSI GKGCMC 1 cut(s) 652
BseXI GCAGC 4 cut(s) 1112, 1255, 1258, 1277
Bsh1236I CGCG 3 cut(s) 367, 369, 477
Bsh1285I CGRYCG 1 cut(s) 322
BshFI GGCC 9 cut(s) 212, 356, 361, 620, 777, 837, 930, 972, 1307
BshNI GGYRCC 1 cut(s) 302
BsiEI CGRYCG 1 cut(s) 322
BsiHKAI GWGCWC 1 cut(s) 652
BsiHKCI CYCGRG 2 cut(s) 350, 1213
BsiSI CCGG 1 cut(s) 300
BslFI GGGAC 1 cut(s) 333
BslI CCNNNNNNNGG 2 cut(s) 357, 989
BsmAI GTCTC 3 cut(s) 248, 710, 1175
BsmBI CGTCTC 1 cut(s) 248
BsmFI GGGAC 1 cut(s) 333
BsnI GGCC 9 cut(s) 212, 356, 361, 620, 777, 837, 930, 972, 1307
Bso31I GGTCTC 1 cut(s) 1175
BsoBI CYCGRG 2 cut(s) 350, 1213
Bsp1286I GDGCHC 1 cut(s) 652
Bsp143I GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
Bsp19I CCATGG 1 cut(s) 596
BspANI GGCC 9 cut(s) 212, 356, 361, 620, 777, 837, 930, 972, 1307
BspCNI CTCAG 4 cut(s) 84, 373, 478, 712
BspFNI CGCG 3 cut(s) 367, 369, 477
BspLI GGNNCC 3 cut(s) 304, 631, 929
BspPI GGATC 1 cut(s) 383
BspT107I GGYRCC 1 cut(s) 302
BspTNI GGTCTC 1 cut(s) 1175
BsrBI CCGCTC 2 cut(s) 394, 416
BsrDI GCAATG 1 cut(s) 213
BsrFI RCCGGY 1 cut(s) 299
BsrI ACTGG 1 cut(s) 631
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 5 cut(s) 351, 596, 811, 1096, 1212
BssMI GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
BssT1I CCWWGG 1 cut(s) 596
Bst2UI CCWGG 4 cut(s) 358, 813, 1097, 1201
Bst4CI ACNGT 7 cut(s) 62, 202, 307, 463, 500, 735, 1297
BstAPI GCANNNNNTGC 1 cut(s) 1271
BstC8I GCNNGC 3 cut(s) 297, 301, 427
BstDEI CTNAG 5 cut(s) 71, 381, 399, 486, 720
BstDSI CCRYGG 1 cut(s) 596
BstF5I GGATG 2 cut(s) 559, 1213
BstFNI CGCG 3 cut(s) 367, 369, 477
BstHHI GCGC 4 cut(s) 6, 13, 37, 369
BstKTI GATC 6 cut(s) 275, 391, 528, 886, 909, 1236
BstMAI GTCTC 3 cut(s) 248, 710, 1175
BstMBI GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
BstMCI CGRYCG 1 cut(s) 322
BstMWI GCNNNNNNNGC 9 cut(s) 10, 239, 375, 422, 834, 877, 886, 1271, 1298
BstNI CCWGG 4 cut(s) 358, 813, 1097, 1201
BstNSI RCATGY 1 cut(s) 1125
BstSCI CCNGG 4 cut(s) 356, 811, 1095, 1199
BstSFI CTRYAG 2 cut(s) 201, 1309
BstSLI GKGCMC 1 cut(s) 652
BstUI CGCG 3 cut(s) 367, 369, 477
BstV1I GCAGC 4 cut(s) 1112, 1255, 1258, 1277
BstV2I GAAGAC 2 cut(s) 255, 322
BstXI CCANNNNNNTGG 2 cut(s) 845, 1028
BsuRI GGCC 9 cut(s) 212, 356, 361, 620, 777, 837, 930, 972, 1307
BtgI CCRYGG 1 cut(s) 596
BtgZI GCGATG 1 cut(s) 424
BtrI CACGTC 1 cut(s) 328
BtsCI GGATG 2 cut(s) 559, 1213
BtsI GCAGTG 3 cut(s) 6, 30, 1293
BtsIMutI CAGTG 4 cut(s) 6, 30, 1293, 1302
Cac8I GCNNGC 3 cut(s) 297, 301, 427
CaiI CAGNNNCTG 2 cut(s) 1271, 1301
CfoI GCGC 4 cut(s) 6, 13, 37, 369
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 2 cut(s) 686, 928
CseI GACGC 2 cut(s) 358, 483
CviAII CATG 4 cut(s) 597, 635, 653, 1122
DdeI CTNAG 5 cut(s) 71, 381, 399, 486, 720
DpnI GATC 6 cut(s) 274, 390, 527, 885, 908, 1235
DpnII GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
EaeI YGGCCR 2 cut(s) 359, 970
EciI GGCGGA 1 cut(s) 171
Eco130I CCWWGG 1 cut(s) 596
Eco147I AGGCCT 2 cut(s) 356, 620
Eco31I GGTCTC 1 cut(s) 1175
Eco47I GGWCC 1 cut(s) 686
Eco88I CYCGRG 2 cut(s) 350, 1213
EcoRII CCWGG 4 cut(s) 356, 811, 1095, 1199
EcoT14I CCWWGG 1 cut(s) 596
ErhI CCWWGG 1 cut(s) 596
Esp3I CGTCTC 1 cut(s) 248
FaeI CATG 4 cut(s) 600, 638, 656, 1125
FaqI GGGAC 1 cut(s) 333
FatI CATG 4 cut(s) 596, 634, 652, 1121
FauI CCCGC 1 cut(s) 247
FbaI TGATCA 2 cut(s) 525, 883
Fnu4HI GCNGC 7 cut(s) 228, 231, 243, 1126, 1266, 1269, 1272
FokI GGATG 2 cut(s) 566, 1220
Fsp4HI GCNGC 7 cut(s) 228, 231, 243, 1126, 1266, 1269, 1272
FspAI RTGCGCAY 1 cut(s) 5
FspI TGCGCA 3 cut(s) 5, 12, 36
GlaI GCGC 4 cut(s) 5, 12, 36, 368
GluI GCNGC 7 cut(s) 228, 231, 243, 1126, 1266, 1269, 1272
GsuI CTGGAG 1 cut(s) 627
HaeIII GGCC 9 cut(s) 212, 356, 361, 620, 777, 837, 930, 972, 1307
HapII CCGG 1 cut(s) 300
HgaI GACGC 2 cut(s) 358, 483
HhaI GCGC 4 cut(s) 6, 13, 37, 369
Hin1II CATG 4 cut(s) 600, 638, 656, 1125
Hin6I GCGC 4 cut(s) 4, 11, 35, 367
HinP1I GCGC 4 cut(s) 4, 11, 35, 367
HincII GTYRAC 2 cut(s) 310, 571
HindII GTYRAC 2 cut(s) 310, 571
HindIII AAGCTT 3 cut(s) 293, 977, 1228
HinfI GANTC 5 cut(s) 346, 383, 548, 739, 1063
HpaII CCGG 1 cut(s) 300
HphI GGTGA 2 cut(s) 512, 1034
Hpy166II GTNNAC 5 cut(s) 310, 559, 571, 650, 686
Hpy188III TCNNGA 6 cut(s) 268, 350, 606, 662, 860, 1237
Hpy8I GTNNAC 5 cut(s) 310, 559, 571, 650, 686
Hpy99I CGWCG 4 cut(s) 221, 367, 374, 500
HpyAV CCTTC 7 cut(s) 156, 182, 368, 464, 473, 892, 1317
HpyCH4III ACNGT 7 cut(s) 62, 202, 307, 463, 500, 735, 1297
HpyCH4IV ACGT 5 cut(s) 257, 327, 452, 852, 1053
HpyCH4V TGCA 4 cut(s) 613, 650, 941, 1265
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 239, 375, 422, 834, 877, 886, 1271, 1298
HpyF3I CTNAG 5 cut(s) 71, 381, 399, 486, 720
HpySE526I ACGT 5 cut(s) 257, 327, 452, 852, 1053
Hsp92II CATG 4 cut(s) 600, 638, 656, 1125
HspAI GCGC 4 cut(s) 4, 11, 35, 367
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
Ksp22I TGATCA 2 cut(s) 525, 883
Kzo9I GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
LmnI GCTCC 5 cut(s) 399, 635, 1144, 1246, 1283
Lsp1109I GCAGC 4 cut(s) 1112, 1255, 1258, 1277
LweI GCATC 2 cut(s) 950, 1198
MaeII ACGT 5 cut(s) 257, 327, 452, 852, 1053
MaeIII GTNAC 1 cut(s) 853
MalI GATC 6 cut(s) 274, 390, 527, 885, 908, 1235
MbiI CCGCTC 2 cut(s) 394, 416
MboI GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
MboII GAAGA 4 cut(s) 260, 322, 397, 936
MhlI GDGCHC 1 cut(s) 652
MlsI TGGCCA 1 cut(s) 972
MluCI AATT 3 cut(s) 465, 875, 963
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 3 cut(s) 355, 392, 557
MmeI TCCRAC 4 cut(s) 240, 519, 531, 1261
Mox20I TGGCCA 1 cut(s) 972
MroNI GCCGGC 1 cut(s) 299
MscI TGGCCA 1 cut(s) 972
MseI TTAA 2 cut(s) 447, 966
MslI CAYNNNNRTG 2 cut(s) 783, 843
Msp20I TGGCCA 1 cut(s) 972
MspA1I CMGCKG 1 cut(s) 1268
MspI CCGG 1 cut(s) 300
MspR9I CCNGG 4 cut(s) 358, 813, 1097, 1201
MvaI CCWGG 4 cut(s) 358, 813, 1097, 1201
MvnI CGCG 3 cut(s) 367, 369, 477
MwoI GCNNNNNNNGC 9 cut(s) 10, 239, 375, 422, 834, 877, 886, 1271, 1298
NaeI GCCGGC 1 cut(s) 301
NcoI CCATGG 1 cut(s) 596
NdeII GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
NgoMIV GCCGGC 1 cut(s) 299
NlaIII CATG 4 cut(s) 600, 638, 656, 1125
NlaIV GGNNCC 3 cut(s) 304, 631, 929
NmuCI GTSAC 1 cut(s) 853
NsbI TGCGCA 3 cut(s) 5, 12, 36
NspI RCATGY 1 cut(s) 1125
PceI AGGCCT 2 cut(s) 356, 620
PcsI WCGNNNNNNNCGW 3 cut(s) 49, 231, 324
PdiI GCCGGC 1 cut(s) 301
PfeI GAWTC 2 cut(s) 739, 1063
PflFI GACNNNGTC 1 cut(s) 575
PkrI GCNGC 7 cut(s) 229, 232, 244, 1127, 1267, 1270, 1273
PleI GAGTC 3 cut(s) 354, 391, 556
PpsI GAGTC 3 cut(s) 354, 391, 556
PshBI ATTAAT 1 cut(s) 966
Psp6I CCWGG 4 cut(s) 356, 811, 1095, 1199
PspGI CCWGG 4 cut(s) 356, 811, 1095, 1199
PspN4I GGNNCC 3 cut(s) 304, 631, 929
PspPI GGNCC 2 cut(s) 686, 928
PstNI CAGNNNCTG 2 cut(s) 1271, 1301
PsyI GACNNNGTC 1 cut(s) 575
PvuII CAGCTG 1 cut(s) 1268
RseI CAYNNNNRTG 2 cut(s) 783, 843
SaqAI TTAA 2 cut(s) 447, 966
SatI GCNGC 7 cut(s) 228, 231, 243, 1126, 1266, 1269, 1272
Sau3AI GATC 6 cut(s) 272, 388, 525, 883, 906, 1233
Sau96I GGNCC 2 cut(s) 686, 928
SchI GAGTC 3 cut(s) 355, 392, 557
ScrFI CCNGG 4 cut(s) 358, 813, 1097, 1201
SduI GDGCHC 1 cut(s) 652
SfaNI GCATC 2 cut(s) 950, 1198
SfcI CTRYAG 2 cut(s) 201, 1309
SinI GGWCC 1 cut(s) 686
SmiMI CAYNNNNRTG 2 cut(s) 783, 843
Sse9I AATT 3 cut(s) 465, 875, 963
SseBI AGGCCT 2 cut(s) 356, 620
StuI AGGCCT 2 cut(s) 356, 620
StyD4I CCNGG 4 cut(s) 356, 811, 1095, 1199
StyI CCWWGG 1 cut(s) 596
TaaI ACNGT 7 cut(s) 62, 202, 307, 463, 500, 735, 1297
TaiI ACGT 5 cut(s) 260, 330, 455, 855, 1056
TaqI TCGA 5 cut(s) 149, 196, 372, 661, 737
TasI AATT 3 cut(s) 465, 875, 963
TauI GCSGC 3 cut(s) 230, 233, 245
TfiI GAWTC 2 cut(s) 739, 1063
Tru1I TTAA 2 cut(s) 447, 966
Tru9I TTAA 2 cut(s) 447, 966
TscAI CASTG 4 cut(s) 13, 37, 1293, 1302
TseFI GTSAC 1 cut(s) 853
TseI GCWGC 4 cut(s) 1125, 1265, 1268, 1271
Tsp45I GTSAC 1 cut(s) 853
TspDTI ATGAA 1 cut(s) 966
TspRI CASTG 4 cut(s) 13, 37, 1293, 1302
Tth111I GACNNNGTC 1 cut(s) 575
VneI GTGCAC 1 cut(s) 648
VpaK11BI GGWCC 1 cut(s) 686
VspI ATTAAT 1 cut(s) 966
XceI RCATGY 1 cut(s) 1125
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.