Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Reverse (-)

35676919 .. 35680904

Gene Structure 3986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G406100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGTCGGAGAAGCATTCTGCCAATGGAGGTGAAGTTGTATTGGAAGTTCGAACCGAAGTTAGCAATGGAGCAAAAGGGTCTTCTTCAAAAGGCTCGGAATCTTCTGCCCCCAAGCCAAGCAAAGTGGGCTCACCCGCCAAAGGGTCCACTGAGTCCAGCACTGGGGTTTCTAAGTCAGTCCCAGTGAGCTTCCCTTCCCCTGAAATTTCAAGATCCAGTCCCGGTAAGCCTCCCAAGATCCCCACCGCAAATGAGACCCTCACTAAGAGAAAGTCATTCACTAGGTTAGTTTCCAAACCCAAGTCAAGGTTTGGTGAACAATCAGTACCCATTGATCCCAATATGTTTGAAGAGAGTGGTTTAGATCAAGTTGGTGCAAATTCTCCCTATTCCCCATATAGGGGTTCATTCAATAGGGCTTCCCCGGGGATTAGGACTGTTTCAATCTCTTCGAGGGTACCAGTGATGCCGTCTCCGGGCAGGGTCAAAGAGCAGGAGGATGAAGAGATTTACAAGAAGGTGAAATTGAGTAGAGATAAGCATAGGAAAGTGAAGACTAAGGTCTTGTTCGAGTGGGTTGTTTTTCTGGGCATTCTGGCTTGTTTAGTGTCTAGCTTGACTGTTGAGAAATTAGAGAATTTTAACATGTGGGGGTTGGAGGTATGGAAATGGTGTGTGCTTGTGATGGTGATATTCTGTGGCATGTTGGTTACAAACTGGTTTATGCATTTCGTAGTGTTTGTCATTGAGAGGAACTTTTTGCTTAGGAAGAAGGTGTTGTATTTTGTTCATGGAATGAAGAAGAGTGTTCAGGTTTTCATTTGGTTGGCTTTGGTTCTTCTCACATGGCTACTGGTGTTCAATGGTGGCAAGGTCGAGCGATCAGAGACTTCCACCAAGATTTTGAATTACGTCACATGGACTCTTGTTTCCGTTCTTATTGGGGCATTTTTGTGGTTGTTAAAGACTTTGTTACTTAAGATCTTAGCATCTAGTTTCCATGTGAACACCTTTTTTGATAGAATCCAAGAATCAATCTTCCATCAGTATGTTCTTCAGACACTTTCAGGGCCTGCACTTATAGAGGAGGCTGAGAGGGTTGGGAGATCACCGAGCACTGGGCAACTGAGTTTCAGGACGACAAAGAAGGCTAAAGCTGGGAAGGAGAAAGAAGTGATTGATATGGGAAAGCTTCAGAAGATGAAGCAAGAGAAGGTTTCAGCTTGGACCATGAAGGTATTGGTGGATGCAGTTTCTACTTCAGGGCTGTCCACTATCTCCCATACATTGGATGAGATGGAACATGGAGGGGTTGAACAGACAGATAAGGAGATTACCAATGAGATGGAAGCAACTGCCGCTGCCTATCACATTTTTTTGAACGTTGCGCCAGCTGGTTCCAAGTACATAGAGGAGGAGGACCTCATGAGGTTCATGATTAAGGAAGAGGTGGATCTTGTGTTTCCGCTGTTTGAAGGAGCAGACACCGGACGTATTGACAGAAAAGCTCTAACAGATTGGGTGGTGAAGGTCTACAATGGTCGCAAAGCATTAGCTCATTCTTTAAATGACACCAAAACAGCTGTAAGGCAATTGAACAAACTTGTGACTGGCATCCTGGTTGTTATTACCGTTGTAGTGTGGCTTCTATTGATGGAAATTGCAACCACAAAAGTGCTTGTGTTCCTTTCATCACAGCTCGTAGTGGCAGCTTTTATGTTTGGAAACACTTGCAAGACAATATTTGAGGCTATCATTTTTGTATTTGTAATGCATCCATTTGATGTTGGTGACCGCTGTGTTGTTGATGGCGTTCCGTTGATGGTTGAGGAGATGAACATCTTAAACACAGTCTTCTTGAAACTCAATAATGAGAAGATTTACTATCCAAATTCCGTTTTATCCACGAAACCCATCAGCAATTATTACAGAAGTCCAGATATGGGCGATATTGTGGAATTCTCGATTGCTTTTATGACCTCGGTGGAGAAGATAGGCTTGCTGAAAGAGAAAATAAACAAGCATTTGGAGAGGAACTCGCAACATTGGCATCCTAACCACAATCTGGTGGTGATTGAAATTGAAAATCTGAATAAGTTAAAGATGGGTCTCTATGTGAATCACACTATGAACTTTCAGGAATTTGGAGAAAAGAATAAGCGGCGAACTGAACTAGTCATCGAGTTGAAGAAAATATTAGAAGAGCTAAACATCACATACAATCTGCTGCCCCAAGAAGTTCATATAACTCAAACTAAAATAGATGCAACTGTTGCCAGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

762

Amino Acids

85.67

Weight (kDa)

9.19

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	457
AccB1I	GGYRCC	1 cut(s)	457
AccB7I	CCANNNNNTGG	2 cut(s)	1288, 2065
AccI	GTMKAC	1 cut(s)	1533
AciI	CCGC	6 cut(s)	135, 246, 1359, 1466, 1795, 2161
AclI	AACGTT	1 cut(s)	1383
AclWI	GGATC	4 cut(s)	207, 232, 329, 1461
AcsI	RAATTY	6 cut(s)	204, 379, 637, 1891, 1958, 2141
AcuI	CTGAAG	3 cut(s)	1040, 1178, 1245
AfaI	GTAC	3 cut(s)	327, 459, 1406
AflII	CTTAAG	1 cut(s)	977
AflIII	ACRYGT	1 cut(s)	645
AhlI	ACTAGT	1 cut(s)	2173
AjnI	CCWGG	1 cut(s)	1617
AleI	CACNNNNGTG	1 cut(s)	1673
Alw21I	GWGCWC	1 cut(s)	1118
Alw26I	GTCTC	4 cut(s)	248, 477, 881, 2114
AlwI	GGATC	4 cut(s)	207, 232, 329, 1461
AlwNI	CAGNNNCTG	1 cut(s)	1073
Ama87I	CYCGRG	1 cut(s)	424
AoxI	GGCC	1 cut(s)	1070
ApeKI	GCWGC	3 cut(s)	1361, 1709, 2227
ApoI	RAATTY	6 cut(s)	204, 379, 637, 1891, 1958, 2141
Asp718I	GGTACC	1 cut(s)	457
AspLEI	GCGC	1 cut(s)	1390
AspS9I	GGNCC	4 cut(s)	144, 1070, 1227, 1420
AsuC2I	CCSGG	4 cut(s)	222, 425, 426, 477
AsuHPI	GGTGA	9 cut(s)	41, 123, 326, 532, 700, 1101, 1537, 1802, 2083
AsuII	TTCGAA	1 cut(s)	49
AvaI	CYCGRG	1 cut(s)	424
AvaII	GGWCC	3 cut(s)	144, 1227, 1420
BanI	GGYRCC	1 cut(s)	457
BanII	GRGCYC	1 cut(s)	131
BarI	GAAGNNNNNNTAC	2 cut(s)	1629, 1661
BbsI	GAAGAC	3 cut(s)	72, 560, 1846
Bbv12I	GWGCWC	1 cut(s)	1118
BbvI	GCAGC	3 cut(s)	1348, 1721, 2214
BccI	CCATC	9 cut(s)	679, 1050, 1291, 1339, 1648, 1802, 1816, 1922, 2098
BceAI	ACGGC	1 cut(s)	454
BciT130I	CCWGG	1 cut(s)	1619
BcnI	CCSGG	4 cut(s)	222, 425, 426, 477
BcoDI	GTCTC	4 cut(s)	248, 477, 881, 2114
BcuI	ACTAGT	1 cut(s)	2173
BfaI	CTAG	4 cut(s)	282, 612, 993, 2174
BfrI	CTTAAG	1 cut(s)	977
BglII	AGATCT	1 cut(s)	981
BisI	GCNGC	5 cut(s)	1359, 1362, 1710, 2162, 2228
BlsI	GCNGC	5 cut(s)	1360, 1363, 1711, 2163, 2229
Bme1390I	CCNGG	5 cut(s)	222, 425, 426, 477, 1619
Bme18I	GGWCC	3 cut(s)	144, 1227, 1420
BmeT110I	CYCGRG	1 cut(s)	424
BmgT120I	GGNCC	4 cut(s)	144, 1070, 1227, 1420
BmiI	GGNNCC	3 cut(s)	145, 459, 1399
BmrFI	CCNGG	5 cut(s)	222, 425, 426, 477, 1619
BmrI	ACTGGG	3 cut(s)	171, 176, 1128
BmsI	GCATC	7 cut(s)	456, 998, 1237, 1623, 1783, 2059, 2254
BmuI	ACTGGG	3 cut(s)	171, 176, 1128
BoxI	GACNNNNGTC	1 cut(s)	560
BpiI	GAAGAC	3 cut(s)	72, 560, 1846
BplI	GAGNNNNNCTC	2 cut(s)	2021, 2053
Bpu10I	CCTNAGC	1 cut(s)	764
Bpu14I	TTCGAA	1 cut(s)	49
BpuMI	CCSGG	4 cut(s)	222, 425, 426, 477
BsaBI	GATNNNNATC	1 cut(s)	1838
BsaI	GGTCTC	2 cut(s)	248, 2114
BsaJI	CCNNGG	4 cut(s)	423, 424, 425, 1980
BsaWI	WCCGGW	1 cut(s)	1487
BsaXI	ACNNNNNCTCC	2 cut(s)	18, 48
Bse1I	ACTGG	8 cut(s)	166, 182, 216, 461, 722, 858, 1123, 1615
Bse3DI	GCAATG	1 cut(s)	70
Bse8I	GATNNNNATC	1 cut(s)	1838
BseBI	CCWGG	1 cut(s)	1619
BseDI	CCNNGG	4 cut(s)	423, 424, 425, 1980
BseGI	GGATG	6 cut(s)	505, 1252, 1297, 1614, 1774, 2050
BseJI	GATNNNNATC	1 cut(s)	1838
BseMI	GCAATG	1 cut(s)	70
BseMII	CTCAG	3 cut(s)	141, 1083, 1118
BseNI	ACTGG	8 cut(s)	166, 182, 216, 461, 722, 858, 1123, 1615
BseRI	GAGGAG	4 cut(s)	1100, 1427, 1430, 1844
BseXI	GCAGC	3 cut(s)	1348, 1721, 2214
BseYI	CCCAGC	1 cut(s)	1157
BsgI	GTGCAG	1 cut(s)	1059
BshFI	GGCC	1 cut(s)	1072
BshNI	GGYRCC	1 cut(s)	457
BsiHKAI	GWGCWC	1 cut(s)	1118
BsiHKCI	CYCGRG	1 cut(s)	424
BsiSI	CCGG	4 cut(s)	222, 425, 476, 1488
BslFI	GGGAC	2 cut(s)	164, 204
BsmAI	GTCTC	4 cut(s)	248, 477, 881, 2114
BsmBI	CGTCTC	1 cut(s)	477
BsmFI	GGGAC	2 cut(s)	164, 204
BsmI	GAATGC	2 cut(s)	13, 591
BsnI	GGCC	1 cut(s)	1072
Bso31I	GGTCTC	2 cut(s)	248, 2114
BsoBI	CYCGRG	1 cut(s)	424
Bsp119I	TTCGAA	1 cut(s)	49
Bsp1286I	GDGCHC	2 cut(s)	131, 1118
Bsp143I	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
BspACI	CCGC	6 cut(s)	135, 246, 1359, 1466, 1795, 2161
BspANI	GGCC	1 cut(s)	1072
BspCNI	CTCAG	3 cut(s)	142, 1084, 1119
BspHI	TCATGA	2 cut(s)	1425, 1434
BspLI	GGNNCC	3 cut(s)	145, 459, 1399
BspPI	GGATC	4 cut(s)	207, 232, 329, 1461
BspQI	GCTCTTC	1 cut(s)	2196
BspT104I	TTCGAA	1 cut(s)	49
BspT107I	GGYRCC	1 cut(s)	457
BspTI	CTTAAG	1 cut(s)	977
BspTNI	GGTCTC	2 cut(s)	248, 2114
BsrDI	GCAATG	1 cut(s)	70
BsrI	ACTGG	8 cut(s)	166, 182, 216, 461, 722, 858, 1123, 1615
BssECI	CCNNGG	4 cut(s)	423, 424, 425, 1980
BssMI	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
Bst2UI	CCWGG	1 cut(s)	1619
Bst4CI	ACNGT	5 cut(s)	439, 622, 1633, 1852, 2272
Bst6I	CTCTTC	6 cut(s)	345, 454, 498, 797, 1440, 2196
BstAFI	CTTAAG	1 cut(s)	977
BstAPI	GCANNNNNTGC	1 cut(s)	2273
BstBI	TTCGAA	1 cut(s)	49
BstC8I	GCNNGC	4 cut(s)	1074, 1392, 2000, 2278
BstDEI	CTNAG	8 cut(s)	150, 171, 264, 558, 764, 985, 1092, 1127
BstEII	GGTNACC	1 cut(s)	1790
BstF5I	GGATG	6 cut(s)	505, 1252, 1297, 1614, 1774, 2050
BstHHI	GCGC	1 cut(s)	1390
BstKTI	GATC	8 cut(s)	215, 240, 337, 367, 884, 984, 1109, 1456
BstMAI	GTCTC	4 cut(s)	248, 477, 881, 2114
BstMBI	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
BstMWI	GCNNNNNNNGC	4 cut(s)	126, 1358, 2047, 2273
BstNI	CCWGG	1 cut(s)	1619
BstNSI	RCATGY	2 cut(s)	649, 706
BstPAI	GACNNNNGTC	1 cut(s)	560
BstPI	GGTNACC	1 cut(s)	1790
BstSCI	CCNGG	5 cut(s)	220, 423, 424, 475, 1617
BstV1I	GCAGC	3 cut(s)	1348, 1721, 2214
BstV2I	GAAGAC	3 cut(s)	72, 560, 1846
BstX2I	RGATCY	4 cut(s)	212, 237, 981, 1453
BstXI	CCANNNNNNTGG	1 cut(s)	1345
BstYI	RGATCY	4 cut(s)	212, 237, 981, 1453
BsuRI	GGCC	1 cut(s)	1072
BtsCI	GGATG	6 cut(s)	505, 1252, 1297, 1614, 1774, 2050
BtsIMutI	CAGTG	5 cut(s)	147, 159, 189, 468, 1116
Cac8I	GCNNGC	4 cut(s)	1074, 1392, 2000, 2278
CaiI	CAGNNNCTG	1 cut(s)	1073
CciI	TCATGA	2 cut(s)	1425, 1434
CfoI	GCGC	1 cut(s)	1390
Cfr13I	GGNCC	4 cut(s)	144, 1070, 1227, 1420
Cfr9I	CCCGGG	1 cut(s)	424
Csp6I	GTAC	3 cut(s)	326, 458, 1405
CspCI	CAANNNNNGTGG	2 cut(s)	105, 140
CviQI	GTAC	3 cut(s)	326, 458, 1405
DdeI	CTNAG	8 cut(s)	150, 171, 264, 558, 764, 985, 1092, 1127
DpnI	GATC	8 cut(s)	214, 239, 336, 366, 883, 983, 1108, 1455
DpnII	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
DraI	TTTAAA	1 cut(s)	1566
Eam1104I	CTCTTC	6 cut(s)	345, 454, 498, 797, 1440, 2196
EarI	CTCTTC	6 cut(s)	345, 454, 498, 797, 1440, 2196
Eco24I	GRGCYC	1 cut(s)	131
Eco31I	GGTCTC	2 cut(s)	248, 2114
Eco47I	GGWCC	3 cut(s)	144, 1227, 1420
Eco57I	CTGAAG	3 cut(s)	1040, 1178, 1245
Eco88I	CYCGRG	1 cut(s)	424
Eco91I	GGTNACC	1 cut(s)	1790
EcoO109I	RGGNCCY	2 cut(s)	1070, 1420
EcoO65I	GGTNACC	1 cut(s)	1790
EcoRI	GAATTC	1 cut(s)	1958
EcoRII	CCWGG	1 cut(s)	1617
EcoT22I	ATGCAT	2 cut(s)	729, 1776
EcoT38I	GRGCYC	1 cut(s)	131
Esp3I	CGTCTC	1 cut(s)	477
FalI	AAGNNNNNCTT	2 cut(s)	1982, 2014
FaqI	GGGAC	2 cut(s)	164, 204
FauI	CCCGC	1 cut(s)	142
FblI	GTMKAC	1 cut(s)	1533
Fnu4HI	GCNGC	5 cut(s)	1359, 1362, 1710, 2162, 2228
FokI	GGATG	6 cut(s)	512, 1259, 1304, 1601, 1761, 2037
FriOI	GRGCYC	1 cut(s)	131
Fsp4HI	GCNGC	5 cut(s)	1359, 1362, 1710, 2162, 2228
FspBI	CTAG	4 cut(s)	282, 612, 993, 2174
GlaI	GCGC	1 cut(s)	1389
GluI	GCNGC	5 cut(s)	1359, 1362, 1710, 2162, 2228
GsaI	CCCAGC	1 cut(s)	1161
HaeIII	GGCC	1 cut(s)	1072
HapII	CCGG	4 cut(s)	222, 425, 476, 1488
HhaI	GCGC	1 cut(s)	1390
Hin6I	GCGC	1 cut(s)	1388
HinP1I	GCGC	1 cut(s)	1388
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	6 cut(s)	98, 152, 922, 1023, 1031, 2119
HpaII	CCGG	4 cut(s)	222, 425, 476, 1488
HphI	GGTGA	9 cut(s)	41, 123, 326, 532, 700, 1101, 1537, 1802, 2083
Hpy166II	GTNNAC	5 cut(s)	147, 317, 1006, 1272, 1534
Hpy188I	TCNGA	6 cut(s)	7, 97, 886, 1059, 1197, 2091
Hpy188III	TCNNGA	8 cut(s)	210, 1135, 1426, 1435, 1858, 1937, 1963, 2138
Hpy8I	GTNNAC	5 cut(s)	147, 317, 1006, 1272, 1534
HpyAV	CCTTC	9 cut(s)	204, 511, 766, 1141, 1156, 1207, 1228, 1469, 1522
HpyCH4III	ACNGT	5 cut(s)	439, 622, 1633, 1852, 2272
HpyCH4IV	ACGT	3 cut(s)	912, 1383, 1492
HpyCH4V	TGCA	8 cut(s)	377, 727, 1076, 1250, 1664, 1734, 1774, 2267
HpyF10VI	GCNNNNNNNGC	4 cut(s)	126, 1358, 2047, 2273
HpyF3I	CTNAG	8 cut(s)	150, 171, 264, 558, 764, 985, 1092, 1127
HpySE526I	ACGT	3 cut(s)	912, 1383, 1492
HspAI	GCGC	1 cut(s)	1388
KpnI	GGTACC	1 cut(s)	461
Kzo9I	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
LguI	GCTCTTC	1 cut(s)	2196
LmnI	GCTCC	2 cut(s)	68, 1478
Lsp1109I	GCAGC	3 cut(s)	1348, 1721, 2214
LweI	GCATC	7 cut(s)	456, 998, 1237, 1623, 1783, 2059, 2254
MaeI	CTAG	4 cut(s)	282, 612, 993, 2174
MaeII	ACGT	3 cut(s)	912, 1383, 1492
MaeIII	GTNAC	5 cut(s)	709, 913, 972, 1606, 1790
MalI	GATC	8 cut(s)	214, 239, 336, 366, 883, 983, 1108, 1455
MboI	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
MfeI	CAATTG	1 cut(s)	1592
MflI	RGATCY	4 cut(s)	212, 237, 981, 1453
MhlI	GDGCHC	2 cut(s)	131, 1118
MlyI	GAGTC	2 cut(s)	161, 916
MmeI	TCCRAC	1 cut(s)	636
Mph1103I	ATGCAT	2 cut(s)	729, 1776
MseI	TTAA	7 cut(s)	642, 962, 978, 1440, 1565, 1844, 2099
MslI	CAYNNNNRTG	3 cut(s)	952, 1047, 1673
MspA1I	CMGCKG	5 cut(s)	1361, 1394, 1468, 1583, 1797
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	4 cut(s)	222, 425, 476, 1488
MspR9I	CCNGG	5 cut(s)	222, 425, 426, 477, 1619
MunI	CAATTG	1 cut(s)	1592
Mva1269I	GAATGC	2 cut(s)	13, 591
MvaI	CCWGG	1 cut(s)	1619
MwoI	GCNNNNNNNGC	4 cut(s)	126, 1358, 2047, 2273
NciI	CCSGG	4 cut(s)	222, 425, 426, 477
NdeII	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
NlaIV	GGNNCC	3 cut(s)	145, 459, 1399
NmuCI	GTSAC	3 cut(s)	913, 1606, 1790
NsiI	ATGCAT	2 cut(s)	729, 1776
NspI	RCATGY	2 cut(s)	649, 706
NspV	TTCGAA	1 cut(s)	49
OliI	CACNNNNGTG	1 cut(s)	1673
PagI	TCATGA	2 cut(s)	1425, 1434
PciI	ACATGT	1 cut(s)	645
PciSI	GCTCTTC	1 cut(s)	2196
PctI	GAATGC	2 cut(s)	13, 591
PfeI	GAWTC	4 cut(s)	98, 1023, 1031, 2119
PflMI	CCANNNNNTGG	2 cut(s)	1288, 2065
PkrI	GCNGC	5 cut(s)	1360, 1363, 1711, 2163, 2229
PleI	GAGTC	2 cut(s)	160, 916
PpsI	GAGTC	2 cut(s)	160, 916
PpuMI	RGGWCCY	1 cut(s)	1420
PscI	ACATGT	1 cut(s)	645
PshAI	GACNNNNGTC	1 cut(s)	560
Psp1406I	AACGTT	1 cut(s)	1383
Psp5II	RGGWCCY	1 cut(s)	1420
Psp6I	CCWGG	1 cut(s)	1617
PspEI	GGTNACC	1 cut(s)	1790
PspFI	CCCAGC	1 cut(s)	1157
PspGI	CCWGG	1 cut(s)	1617
PspN4I	GGNNCC	3 cut(s)	145, 459, 1399
PspPI	GGNCC	4 cut(s)	144, 1070, 1227, 1420
PspPPI	RGGWCCY	1 cut(s)	1420
PsrI	GAACNNNNNNTAC	4 cut(s)	30, 62, 309, 341
PstNI	CAGNNNCTG	1 cut(s)	1073
PsuI	RGATCY	4 cut(s)	212, 237, 981, 1453
PvuII	CAGCTG	2 cut(s)	1394, 1583
RsaI	GTAC	3 cut(s)	327, 459, 1406
RsaNI	GTAC	3 cut(s)	326, 458, 1405
RseI	CAYNNNNRTG	3 cut(s)	952, 1047, 1673
SapI	GCTCTTC	1 cut(s)	2196
SaqAI	TTAA	7 cut(s)	642, 962, 978, 1440, 1565, 1844, 2099
SatI	GCNGC	5 cut(s)	1359, 1362, 1710, 2162, 2228
Sau3AI	GATC	8 cut(s)	212, 237, 334, 364, 881, 981, 1106, 1453
Sau96I	GGNCC	4 cut(s)	144, 1070, 1227, 1420
SchI	GAGTC	2 cut(s)	161, 916
ScrFI	CCNGG	5 cut(s)	222, 425, 426, 477, 1619
SduI	GDGCHC	2 cut(s)	131, 1118
SfaNI	GCATC	7 cut(s)	456, 998, 1237, 1623, 1783, 2059, 2254
SfuI	TTCGAA	1 cut(s)	49
SinI	GGWCC	3 cut(s)	144, 1227, 1420
SmaI	CCCGGG	1 cut(s)	426
SmiMI	CAYNNNNRTG	3 cut(s)	952, 1047, 1673
SmlI	CTYRAG	1 cut(s)	977
SmoI	CTYRAG	1 cut(s)	977
SpeI	ACTAGT	1 cut(s)	2173
SsiI	CCGC	6 cut(s)	135, 246, 1359, 1466, 1795, 2161
SspI	AATATT	2 cut(s)	1743, 2196
SspMI	CTAG	4 cut(s)	282, 612, 993, 2174
StyD4I	CCNGG	5 cut(s)	220, 423, 424, 475, 1617
TaaI	ACNGT	5 cut(s)	439, 622, 1633, 1852, 2272
TaiI	ACGT	3 cut(s)	915, 1386, 1495
TaqI	TCGA	6 cut(s)	49, 452, 570, 876, 1964, 2181
TatI	WGTACW	1 cut(s)	1404
TauI	GCSGC	2 cut(s)	1361, 2164
TfiI	GAWTC	4 cut(s)	98, 1023, 1031, 2119
Tru1I	TTAA	7 cut(s)	642, 962, 978, 1440, 1565, 1844, 2099
Tru9I	TTAA	7 cut(s)	642, 962, 978, 1440, 1565, 1844, 2099
TscAI	CASTG	5 cut(s)	154, 166, 189, 468, 1123
TseFI	GTSAC	3 cut(s)	913, 1606, 1790
TseI	GCWGC	3 cut(s)	1361, 1709, 2227
Tsp45I	GTSAC	3 cut(s)	913, 1606, 1790
TspGWI	ACGGA	3 cut(s)	922, 1806, 1885
TspMI	CCCGGG	1 cut(s)	424
TspRI	CASTG	5 cut(s)	154, 166, 189, 468, 1123
Van91I	CCANNNNNTGG	2 cut(s)	1288, 2065
Vha464I	CTTAAG	1 cut(s)	977
VpaK11BI	GGWCC	3 cut(s)	144, 1227, 1420
XapI	RAATTY	6 cut(s)	204, 379, 637, 1891, 1958, 2141
XceI	RCATGY	2 cut(s)	649, 706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1237
XmaI	CCCGGG	1 cut(s)	424
XmiI	GTMKAC	1 cut(s)	1533
XspI	CTAG	4 cut(s)	282, 612, 993, 2174
Zsp2I	ATGCAT	2 cut(s)	729, 1776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.