pycom15g04990

Mechanosensitive ion channel protein 10-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
2989882 .. 2992078
2197 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g04990.5

Sequence Viewer

Length: 1416 bp
ATGGCTATTGGTGTTCAATCGGGGGGTCGAGCGATCGATCGAAAGACTTCCACCAAGATTTTGAATTATGTCACATGGACTCTTGTTTCCATTCTTGTTGGGGCATTTTTGTGGTTGTTAAAAACTTTGTTCCTTAAGATTTTAGCATCTAGTTTCCATGTGAACACCTTTTTTGATAGAATCCAAGAATCAATCTTCCATCAGTATGTTCTTCAGACACTTTCAGGGCCAGCACTTATAGAGGAGGCGGAGAGGGTTGGGAAATGTCCGAGCACTGGGCAAGTGAGTTTCAGGACGACAAAGAAGGCTAAGGCTGGGAAGGAGAAAGAGGTGATTGATATGGGAAAGCTTCAGAAGATGAAGCAAGAGAAGGTTTCAGCTTGGACCATGAAGGTATTGGTGGACGCAGTTTCGAGTTCAGGGCTGTCCACCATCTCCCATGCATTGGATGAGATGGAAGCGGGAGGAGCTGAACAGACGGATAGGGAGATTACTAATGAGATGGAAGCAACCGCCGCTGCCTATTACATTTTTCATAATGTCGCACAACCGGATTCCAAGTACATTGAGGAGGAGGACCTCATGAGGTTCATGATTAAAGAAGAGGTGGAACTTGTGTTTCCGCTGTTTGATACAGACGAGACTGGACATATTGACCGAAAAACTCTAACGGATTGGGTGGTGAAGGTGTACAATGGTCGCAAAGCATTAGCTCATGCTTTAAACGACACCAAAACAGCTGTAAGGCAATTGAACAAACTTGTGACTGGCATCCTGGTTGTTATCACCATTGTAGTGTGGCTTTTATTGATGGAAATTGCAACCACGAAAGTGCTTGTTTTCCTCTCGTCACAGCTCGTAGTTGCAGCTTTTATGTTTGGAAACACTTGCAAGACTATATTTGAAGCTATAATTTTTGTATTTGTAATGCATCCATTTGATGTTGGTGACCGCTGTGTTGTTGATGGTGTTCCGTTGATGGTTGAGGAGATGAATATCTTAAATACAGTCTTCTTGAAACTCAATATGGAGAAGGTATACTATCCGAATTCAGTTTTGTCCACAAAAGCCATCAGCAATTACTACAGAAGTCCAAACATGCAAGACATCGTCGAATTCCACATTGCTTTTTCGACAACAGTGGAGAGGATAGGCATGCTGAAAGAGAGAATAAAACATCATTTGGAGAGTAACTCGCAGCATTGGCATTCTGACCACAATCTGGTAGTGGTTGAATTTGAAAATCTCAATAAATTAAAGATGGCCCTGTATGTCACTCACACAATGAACTTTCAAGAGTTCGGAGAAAAGAATAAGCGGAGAACTGAACTAGTCATGGAATTGAAGAAAATGTTGGAAGAGCTCCAAATCAAGTACAATCTGCTGCCCCAAGAAGTTCGTCTCACTCAAACTTAA

Protein Analysis

472

Amino Acids

53.77

Weight (kDa)

6.56

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 445, 1222
AccI GTMKAC 1 cut(s) 1038
AciI CCGC 7 cut(s) 248, 461, 513, 516, 623, 952, 1318
AcsI RAATTY 3 cut(s) 1048, 1115, 1235
AcuI CTGAAG 2 cut(s) 197, 335
AfaI GTAC 3 cut(s) 563, 692, 1376
AfiI CCNNNNNNNGG 3 cut(s) 275, 445, 1222
AflII CTTAAG 1 cut(s) 134
AgsI TTSAA 9 cut(s) 17, 64, 754, 905, 1018, 1235, 1241, 1295, 1345
AhlI ACTAGT 1 cut(s) 1330
AjnI CCWGG 1 cut(s) 774
AjuI GAANNNNNNNTTGG 2 cut(s) 1337, 1369
AleI CACNNNNGTG 1 cut(s) 830
AluBI AGCT 9 cut(s) 349, 380, 470, 713, 740, 856, 869, 908, 1363
AluI AGCT 9 cut(s) 349, 380, 470, 713, 740, 856, 869, 908, 1363
Alw21I GWGCWC 2 cut(s) 275, 1365
Alw26I GTCTC 2 cut(s) 635, 1406
AoxI GGCC 2 cut(s) 227, 1263
ApeKI GCWGC 4 cut(s) 518, 866, 1198, 1384
ApoI RAATTY 3 cut(s) 1048, 1115, 1235
Asp700I GAANNNNTTC 1 cut(s) 46
AspS9I GGNCC 4 cut(s) 227, 384, 577, 1264
AsuHPI GGTGA 4 cut(s) 343, 694, 778, 959
AvaII GGWCC 2 cut(s) 384, 577
BanII GRGCYC 1 cut(s) 1365
BbsI GAAGAC 1 cut(s) 1003
Bbv12I GWGCWC 2 cut(s) 275, 1365
BbvI GCAGC 4 cut(s) 505, 878, 1210, 1371
BccI CCATC 9 cut(s) 207, 440, 448, 496, 805, 959, 973, 1079, 1255
BciT130I CCWGG 1 cut(s) 776
BcoDI GTCTC 2 cut(s) 635, 1406
BcuI ACTAGT 1 cut(s) 1330
BfaI CTAG 2 cut(s) 150, 1331
BfmI CTRYAG 1 cut(s) 1084
BfrI CTTAAG 1 cut(s) 134
BisI GCNGC 5 cut(s) 516, 519, 867, 1199, 1385
BlsI GCNGC 5 cut(s) 517, 520, 868, 1200, 1386
Bme1390I CCNGG 1 cut(s) 776
Bme18I GGWCC 2 cut(s) 384, 577
BmgT120I GGNCC 4 cut(s) 227, 384, 577, 1264
BmrFI CCNGG 1 cut(s) 776
BmrI ACTGGG 1 cut(s) 285
BmsI GCATC 3 cut(s) 155, 780, 940
BmuI ACTGGG 1 cut(s) 285
BpiI GAAGAC 1 cut(s) 1003
BplI GAGNNNNNCTC 2 cut(s) 1178, 1210
Bpu10I CCTNAGC 1 cut(s) 309
Bsa29I ATCGAT 1 cut(s) 36
BsaBI GATNNNNATC 1 cut(s) 995
BsaWI WCCGGW 1 cut(s) 550
Bsc4I CCNNNNNNNGG 3 cut(s) 275, 445, 1222
Bse1I ACTGG 3 cut(s) 280, 649, 772
Bse3DI GCAATG 1 cut(s) 1122
Bse8I GATNNNNATC 1 cut(s) 995
BseBI CCWGG 1 cut(s) 776
BseCI ATCGAT 1 cut(s) 36
BseGI GGATG 3 cut(s) 454, 771, 931
BseJI GATNNNNATC 1 cut(s) 995
BseLI CCNNNNNNNGG 3 cut(s) 275, 445, 1222
BseMI GCAATG 1 cut(s) 1122
BseNI ACTGG 3 cut(s) 280, 649, 772
BseRI GAGGAG 5 cut(s) 257, 480, 584, 587, 1001
BseXI GCAGC 4 cut(s) 505, 878, 1210, 1371
BseYI CCCAGC 1 cut(s) 314
Bsh1285I CGRYCG 2 cut(s) 36, 40
BshFI GGCC 2 cut(s) 229, 1265
BshVI ATCGAT 1 cut(s) 36
BsiEI CGRYCG 2 cut(s) 36, 40
BsiHKAI GWGCWC 2 cut(s) 275, 1365
BsiSI CCGG 1 cut(s) 551
BslI CCNNNNNNNGG 3 cut(s) 275, 445, 1222
BsmAI GTCTC 2 cut(s) 635, 1406
BsmBI CGTCTC 1 cut(s) 1406
BsmI GAATGC 1 cut(s) 1207
BsnI GGCC 2 cut(s) 229, 1265
Bsp1286I GDGCHC 2 cut(s) 275, 1365
Bsp1407I TGTACA 1 cut(s) 690
Bsp143I GATC 2 cut(s) 33, 37
BspACI CCGC 7 cut(s) 248, 461, 513, 516, 623, 952, 1318
BspANI GGCC 2 cut(s) 229, 1265
BspDI ATCGAT 1 cut(s) 36
BspHI TCATGA 2 cut(s) 582, 591
BspQI GCTCTTC 1 cut(s) 1353
BspTI CTTAAG 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 1122
BsrGI TGTACA 1 cut(s) 690
BsrI ACTGG 3 cut(s) 280, 649, 772
BssMI GATC 2 cut(s) 33, 37
BssNAI GTATAC 1 cut(s) 1039
Bst1107I GTATAC 1 cut(s) 1039
Bst2UI CCWGG 1 cut(s) 776
Bst4CI ACNGT 2 cut(s) 1009, 1141
Bst6I CTCTTC 2 cut(s) 597, 1353
BstAFI CTTAAG 1 cut(s) 134
BstAUI TGTACA 1 cut(s) 690
BstC8I GCNNGC 2 cut(s) 231, 1157
BstDEI CTNAG 1 cut(s) 309
BstEII GGTNACC 1 cut(s) 947
BstF5I GGATG 3 cut(s) 454, 771, 931
BstKTI GATC 2 cut(s) 36, 40
BstMAI GTCTC 2 cut(s) 635, 1406
BstMBI GATC 2 cut(s) 33, 37
BstMCI CGRYCG 2 cut(s) 36, 40
BstMWI GCNNNNNNNGC 3 cut(s) 467, 515, 1204
BstNI CCWGG 1 cut(s) 776
BstNSI RCATGY 2 cut(s) 1102, 1159
BstPI GGTNACC 1 cut(s) 947
BstSCI CCNGG 1 cut(s) 774
BstSFI CTRYAG 1 cut(s) 1084
BstV1I GCAGC 4 cut(s) 505, 878, 1210, 1371
BstV2I GAAGAC 1 cut(s) 1003
BstZ17I GTATAC 1 cut(s) 1039
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 2 cut(s) 229, 1265
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 3 cut(s) 454, 771, 931
BtsIMutI CAGTG 2 cut(s) 273, 1146
Cac8I GCNNGC 2 cut(s) 231, 1157
CciI TCATGA 2 cut(s) 582, 591
Cfr13I GGNCC 4 cut(s) 227, 384, 577, 1264
ClaI ATCGAT 1 cut(s) 36
CseI GACGC 1 cut(s) 413
Csp6I GTAC 3 cut(s) 562, 691, 1375
CviQI GTAC 3 cut(s) 562, 691, 1375
DdeI CTNAG 1 cut(s) 309
DpnI GATC 2 cut(s) 35, 39
DpnII GATC 2 cut(s) 33, 37
DraI TTTAAA 1 cut(s) 723
Eam1104I CTCTTC 2 cut(s) 597, 1353
EarI CTCTTC 2 cut(s) 597, 1353
EciI GGCGGA 1 cut(s) 263
Ecl136II GAGCTC 1 cut(s) 1363
Eco24I GRGCYC 1 cut(s) 1365
Eco47I GGWCC 2 cut(s) 384, 577
Eco53kI GAGCTC 1 cut(s) 1363
Eco57I CTGAAG 2 cut(s) 197, 335
Eco91I GGTNACC 1 cut(s) 947
EcoICRI GAGCTC 1 cut(s) 1363
EcoO109I RGGNCCY 1 cut(s) 577
EcoO65I GGTNACC 1 cut(s) 947
EcoRI GAATTC 2 cut(s) 1048, 1115
EcoRII CCWGG 1 cut(s) 774
EcoT22I ATGCAT 2 cut(s) 445, 933
EcoT38I GRGCYC 1 cut(s) 1365
Esp3I CGTCTC 1 cut(s) 1406
FauI CCCGC 1 cut(s) 454
FblI GTMKAC 1 cut(s) 1038
Fnu4HI GCNGC 5 cut(s) 516, 519, 867, 1199, 1385
FokI GGATG 3 cut(s) 461, 758, 918
FriOI GRGCYC 1 cut(s) 1365
Fsp4HI GCNGC 5 cut(s) 516, 519, 867, 1199, 1385
FspBI CTAG 2 cut(s) 150, 1331
GluI GCNGC 5 cut(s) 516, 519, 867, 1199, 1385
GsaI CCCAGC 1 cut(s) 318
HaeIII GGCC 2 cut(s) 229, 1265
HapII CCGG 1 cut(s) 551
HgaI GACGC 1 cut(s) 413
HindIII AAGCTT 1 cut(s) 347
HinfI GANTC 4 cut(s) 79, 180, 188, 554
HpaII CCGG 1 cut(s) 551
HphI GGTGA 4 cut(s) 343, 694, 778, 959
Hpy166II GTNNAC 6 cut(s) 163, 403, 429, 691, 1039, 1062
Hpy188I TCNGA 6 cut(s) 216, 270, 354, 1047, 1213, 1304
Hpy188III TCNNGA 5 cut(s) 292, 583, 592, 1015, 1295
Hpy8I GTNNAC 6 cut(s) 163, 403, 429, 691, 1039, 1062
Hpy99I CGWCG 1 cut(s) 1115
HpyAV CCTTC 6 cut(s) 298, 313, 364, 385, 679, 1027
HpyCH4III ACNGT 2 cut(s) 1009, 1141
HpyCH4V TGCA 6 cut(s) 443, 821, 866, 891, 931, 1102
HpyF10VI GCNNNNNNNGC 3 cut(s) 467, 515, 1204
HpyF3I CTNAG 1 cut(s) 309
Kzo9I GATC 2 cut(s) 33, 37
LguI GCTCTTC 1 cut(s) 1353
LmnI GCTCC 2 cut(s) 467, 1368
Lsp1109I GCAGC 4 cut(s) 505, 878, 1210, 1371
LweI GCATC 3 cut(s) 155, 780, 940
MaeI CTAG 2 cut(s) 150, 1331
MaeIII GTNAC 6 cut(s) 70, 763, 849, 947, 1190, 1273
MalI GATC 2 cut(s) 35, 39
MboI GATC 2 cut(s) 33, 37
MboII GAAGA 7 cut(s) 187, 203, 367, 614, 1003, 1357, 1370
MfeI CAATTG 1 cut(s) 749
MhlI GDGCHC 2 cut(s) 275, 1365
MlyI GAGTC 1 cut(s) 73
MmeI TCCRAC 1 cut(s) 1335
Mph1103I ATGCAT 2 cut(s) 445, 933
MroXI GAANNNNTTC 1 cut(s) 46
MseI TTAA 7 cut(s) 119, 135, 597, 722, 1001, 1256, 1414
MslI CAYNNNNRTG 4 cut(s) 109, 204, 794, 830
MspA1I CMGCKG 4 cut(s) 518, 625, 740, 954
MspCI CTTAAG 1 cut(s) 134
MspI CCGG 1 cut(s) 551
MspR9I CCNGG 1 cut(s) 776
MunI CAATTG 1 cut(s) 749
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 1 cut(s) 776
MwoI GCNNNNNNNGC 3 cut(s) 467, 515, 1204
NdeII GATC 2 cut(s) 33, 37
NmuCI GTSAC 5 cut(s) 70, 763, 849, 947, 1273
NsiI ATGCAT 2 cut(s) 445, 933
NspI RCATGY 2 cut(s) 1102, 1159
OliI CACNNNNGTG 1 cut(s) 830
PaeI GCATGC 1 cut(s) 1159
PagI TCATGA 2 cut(s) 582, 591
PciSI GCTCTTC 1 cut(s) 1353
PctI GAATGC 1 cut(s) 1207
PdmI GAANNNNTTC 1 cut(s) 46
PfeI GAWTC 3 cut(s) 180, 188, 554
PflFI GACNNNGTC 1 cut(s) 1109
PflMI CCANNNNNTGG 2 cut(s) 445, 1222
PkrI GCNGC 5 cut(s) 517, 520, 868, 1200, 1386
Ple19I CGATCG 2 cut(s) 36, 40
PleI GAGTC 1 cut(s) 73
PpsI GAGTC 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 577
Psp124BI GAGCTC 1 cut(s) 1365
Psp5II RGGWCCY 1 cut(s) 577
Psp6I CCWGG 1 cut(s) 774
PspEI GGTNACC 1 cut(s) 947
PspFI CCCAGC 1 cut(s) 314
PspGI CCWGG 1 cut(s) 774
PspPI GGNCC 4 cut(s) 227, 384, 577, 1264
PspPPI RGGWCCY 1 cut(s) 577
PsyI GACNNNGTC 1 cut(s) 1109
PvuI CGATCG 2 cut(s) 36, 40
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 3 cut(s) 563, 692, 1376
RsaNI GTAC 3 cut(s) 562, 691, 1375
RseI CAYNNNNRTG 4 cut(s) 109, 204, 794, 830
SacI GAGCTC 1 cut(s) 1365
SapI GCTCTTC 1 cut(s) 1353
SaqAI TTAA 7 cut(s) 119, 135, 597, 722, 1001, 1256, 1414
SatI GCNGC 5 cut(s) 516, 519, 867, 1199, 1385
Sau3AI GATC 2 cut(s) 33, 37
Sau96I GGNCC 4 cut(s) 227, 384, 577, 1264
SchI GAGTC 1 cut(s) 73
ScrFI CCNGG 1 cut(s) 776
SduI GDGCHC 2 cut(s) 275, 1365
SfaNI GCATC 3 cut(s) 155, 780, 940
SfcI CTRYAG 1 cut(s) 1084
SinI GGWCC 2 cut(s) 384, 577
SmiMI CAYNNNNRTG 4 cut(s) 109, 204, 794, 830
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
SpeI ACTAGT 1 cut(s) 1330
SphI GCATGC 1 cut(s) 1159
SsiI CCGC 7 cut(s) 248, 461, 513, 516, 623, 952, 1318
SspMI CTAG 2 cut(s) 150, 1331
SstI GAGCTC 1 cut(s) 1365
StyD4I CCNGG 1 cut(s) 774
TaaI ACNGT 2 cut(s) 1009, 1141
TaqI TCGA 6 cut(s) 28, 36, 40, 413, 1113, 1133
TaqII GACCGA 1 cut(s) 672
TatI WGTACW 3 cut(s) 561, 690, 1374
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 3 cut(s) 180, 188, 554
Tru1I TTAA 7 cut(s) 119, 135, 597, 722, 1001, 1256, 1414
Tru9I TTAA 7 cut(s) 119, 135, 597, 722, 1001, 1256, 1414
TscAI CASTG 2 cut(s) 280, 1146
TseFI GTSAC 5 cut(s) 70, 763, 849, 947, 1273
TseI GCWGC 4 cut(s) 518, 866, 1198, 1384
Tsp45I GTSAC 5 cut(s) 70, 763, 849, 947, 1273
TspDTI ATGAA 6 cut(s) 374, 404, 524, 580, 1007, 1301
TspGWI ACGGA 3 cut(s) 494, 686, 963
TspRI CASTG 2 cut(s) 280, 1146
Tth111I GACNNNGTC 1 cut(s) 1109
Van91I CCANNNNNTGG 2 cut(s) 445, 1222
Vha464I CTTAAG 1 cut(s) 134
VpaK11BI GGWCC 2 cut(s) 384, 577
XapI RAATTY 3 cut(s) 1048, 1115, 1235
XceI RCATGY 2 cut(s) 1102, 1159
XcmI CCANNNNNNNNNTGG 1 cut(s) 394
XmiI GTMKAC 1 cut(s) 1038
XmnI GAANNNNTTC 1 cut(s) 46
XspI CTAG 2 cut(s) 150, 1331
Zsp2I ATGCAT 2 cut(s) 445, 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.