Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Reverse (-)

1297906 .. 1300904

Gene Structure 2999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010393

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTCGGAGAAGCAGCAATCTCCTAGCGGAGGTGAAGTTGTAGTGGAAGTTGGAAGGGAAAAGAGCAATGAACCAAAAGGCTCAGACTCTTCAGCTAGCCAGACCCTCACTAAGAGAAAGTCATTCAGTAGGTCAGTTCTCTCCAAACCCAAGTCGAGATTCGGTGAACAATTTCCCATTATGTATGAAGAGACTAGTTTAGATCAGGCAGCTGATGCAAATTCCCCCAATGCTTCATTCAATAGGGAGTCCCCGAATGAAATCTCATTGGTTAGGACTGAGGAGAATGCACCGCCATCTCCAGGCAAAACAAAAGATGAGGAGGATGAAGAGATTTACAAGAAGGTTAAATTGAGTAGAAGAGTGAGCTGCAAAAAAATCTCGATTGAGTGGATTGTTTTTCTATCCATTTTGGGTTTTTTAGTGGCTAGCTTGACTGTCCATAAGCTAAAGAATCTTATGGTTTGGGGATTGGAGGTTTGGAAATGGTGTGCGCTTGTAATGGTGGTATTATGTGGCATGCTGATGACAAATTGGGTTATCGGTTTCATATTTTTGGTGATCGAGCACAACTTTTTGCTTAGGAAGAAGGTGTTGTATTTTGTTTATGGAATGAAGAAGGGTATTCAGTTTCTCATGTGGGGGAGTCTGATTCTTCTCACATGGCTACTCTTGATCAAGCGCGGGCATCAGCAATCGAAAGTTCCCACTAAGATTCTGGCTTACATCACGCGAAGTATCGTTGCAGTTGTTATTGGGGCATTTTTGTGGTTGTTAAAGACTTTGTTGGTTCTGATCTTAGCATCTAAATTCGAGGCGGTCACCTATTTTGATAGAATTCAAGAATCGATATTCATTCAATATGTTCTTCAGACACTTTCAGGACCGCCGTTGATGGAGGAGGCTTATGAAATATCACGATCGCGAGAAGGGAAGGAGGAACAGGTCATTGACGTGACAAAGCTTCAAAAGATAAAGCAAGAGACCTTGAAGGTATTGATCGATGCAGCAACTAGTTCAGGGCCATCCACCATCTCTCCTACATTGGAGGGGATAGAGGATCTAAATGAACAGAGAGATAAAGAGATCACCAGTGAGATGGAAGCAACTGCTGCTGCACATGACATTTTCCTTAACGTCGCTCCGCCTGGTTCTAAGTACATTGAGGAGCGGGATCTCTTGAGGTTCATGCGCAAGCAAGAGGTCGACCTTGTATGGCCGCTGATTGACGTAGTAATGACCGGACAAGTTGACAGAAAAACTCTAACAGACTGGGTGGTGAAGGTCCACACTGATCGCAAAGCATTAGCTCATGCATTGTCTGATACCAAAGCAGTTACACGGCAAGTCAACAATCTTGTGACTAGCATTGTGTTTATTATCATCATCGTTGTGAGCCTTCTAGTGGTGGAAATTGCAACCACAAGCTTTTTTGTCTTCCTATCATCACAGCTCGTATTAGCAGCTTTTGCTTTCGGAAACACTTGCAAGAATGTATTTGAATCTATCATGTTTCTATTTGTGGCTCATCCATATGATGTTGGTGACTGCATTGTTTTTGAAGGCGTTCCGATGATAGTTGAAGAGATAAACATCTTTACTACAGTTTTCTTGAGACTCAGTAATAACGAGAAGGTGTACTATCCGAATTCAGTTTTATCTGCAACATCGATCAGCAATTACTCCAGAAGTCCAGATATGAGAGATGCTGTAGAGTTCTCAATTGCTTTAACACCAGTGGAGAAGATAGTCAAGTTGAAAGAGAAAATAAAGGAATACATCGAGGGGAAGCCTCAATATTGGCATCAAAAACACAATGTGGTGGTGATGAACATTGAAGATGTCAAGTTAAATATGGCCGTGTATTGTCATCATAAAATGAACTATAAAGATTTTGAGGAAAAGAATTTGCGCAGAGCTGAGCTAAACTTCGAATTGCTGAAAATTCTTGAAGAGCTAAACATCACAGTAATATCTGCTGTCCTCCCAAAAAGTGAATCTCACTCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

671

Amino Acids

76.16

Weight (kDa)

6.89

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MS_channel_2nd	PF00924	495 - 563	1.4e-10	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1193, 1913
AccBSI	CCGCTC	1 cut(s)	1171
AccI	GTMKAC	1 cut(s)	1206
AccII	CGCG	3 cut(s)	684, 733, 925
AciI	CCGC	8 cut(s)	27, 293, 684, 818, 887, 1145, 1171, 1220
AclWI	GGATC	2 cut(s)	1068, 1182
AcoI	YGGCCR	2 cut(s)	1217, 1857
AcsI	RAATTY	6 cut(s)	220, 809, 837, 1648, 1906, 1944
AcuI	CTGAAG	2 cut(s)	75, 854
AdeI	CACNNNGTG	1 cut(s)	1819
AfaI	GTAC	2 cut(s)	1160, 1640
AfiI	CCNNNNNNNGG	3 cut(s)	29, 302, 1405
AhlI	ACTAGT	2 cut(s)	194, 1013
AjiI	CACGTC	1 cut(s)	955
AjnI	CCWGG	2 cut(s)	301, 1147
AjuI	GAANNNNNNNTTGG	4 cut(s)	143, 175, 221, 253
Alw21I	GWGCWC	1 cut(s)	570
Alw26I	GTCTC	3 cut(s)	185, 977, 1609
AlwI	GGATC	2 cut(s)	1068, 1182
AoxI	GGCC	3 cut(s)	1022, 1217, 1857
ApeKI	GCWGC	7 cut(s)	13, 209, 369, 1007, 1112, 1115, 1463
ApoI	RAATTY	6 cut(s)	220, 809, 837, 1648, 1906, 1944
Asp700I	GAANNNNTTC	2 cut(s)	171, 1566
AspLEI	GCGC	4 cut(s)	496, 684, 1194, 1914
AspS9I	GGNCC	3 cut(s)	884, 1022, 1285
AsuHPI	GGTGA	8 cut(s)	44, 176, 571, 814, 1081, 1291, 1556, 1837
AsuII	TTCGAA	1 cut(s)	1932
AsuNHI	GCTAGC	2 cut(s)	95, 428
AvaII	GGWCC	2 cut(s)	884, 1285
BbsI	GAAGAC	1 cut(s)	1429
Bbv12I	GWGCWC	1 cut(s)	570
BbvI	GCAGC	7 cut(s)	25, 221, 356, 1019, 1099, 1102, 1475
BccI	CCATC	5 cut(s)	304, 889, 1033, 1040, 1093
BceAI	ACGGC	3 cut(s)	874, 1358, 1844
BciT130I	CCWGG	2 cut(s)	303, 1149
BclI	TGATCA	1 cut(s)	675
BcoDI	GTCTC	3 cut(s)	185, 977, 1609
BcuI	ACTAGT	2 cut(s)	194, 1013
BfaI	CTAG	7 cut(s)	24, 96, 195, 429, 1014, 1365, 1403
BfmI	CTRYAG	2 cut(s)	1602, 1710
BisI	GCNGC	8 cut(s)	14, 210, 370, 1008, 1113, 1116, 1220, 1464
BlpI	GCTNAGC	1 cut(s)	1920
BlsI	GCNGC	8 cut(s)	15, 211, 371, 1009, 1114, 1117, 1221, 1465
Bme1390I	CCNGG	2 cut(s)	303, 1149
Bme18I	GGWCC	2 cut(s)	884, 1285
BmgBI	CACGTC	1 cut(s)	955
BmgT120I	GGNCC	3 cut(s)	884, 1022, 1285
BmrFI	CCNGG	2 cut(s)	303, 1149
BmrI	ACTGGG	1 cut(s)	1282
BmsI	GCATC	6 cut(s)	205, 697, 812, 994, 1696, 1813
BmtI	GCTAGC	2 cut(s)	99, 432
BmuI	ACTGGG	1 cut(s)	1282
BpiI	GAAGAC	1 cut(s)	1429
BpmI	CTGGAG	2 cut(s)	285, 1669
Bpu10I	CCTNAGC	1 cut(s)	581
Bpu1102I	GCTNAGC	1 cut(s)	1920
Bpu14I	TTCGAA	1 cut(s)	1932
BpuEI	CTTGAG	2 cut(s)	1201, 1633
Bsa29I	ATCGAT	3 cut(s)	848, 1002, 1670
BsaBI	GATNNNNATC	1 cut(s)	1592
BsaI	GGTCTC	1 cut(s)	977
BsaWI	WCCGGW	1 cut(s)	1241
BsaXI	ACNNNNNCTCC	4 cut(s)	21, 51, 1021, 1051
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 302, 1405
Bse1I	ACTGG	3 cut(s)	1092, 1277, 1736
Bse3DI	GCAATG	1 cut(s)	73
Bse8I	GATNNNNATC	1 cut(s)	1592
BseBI	CCWGG	2 cut(s)	303, 1149
BseCI	ATCGAT	3 cut(s)	848, 1002, 1670
BseGI	GGATG	3 cut(s)	331, 1025, 1528
BseJI	GATNNNNATC	1 cut(s)	1592
BseLI	CCNNNNNNNGG	3 cut(s)	29, 302, 1405
BseMI	GCAATG	1 cut(s)	73
BseMII	CTCAG	4 cut(s)	96, 270, 1633, 1911
BseNI	ACTGG	3 cut(s)	1092, 1277, 1736
BseRI	GAGGAG	4 cut(s)	296, 335, 914, 1181
BseXI	GCAGC	7 cut(s)	25, 221, 356, 1019, 1099, 1102, 1475
BsgI	GTGCAG	1 cut(s)	1101
Bsh1236I	CGCG	3 cut(s)	684, 733, 925
Bsh1285I	CGRYCG	1 cut(s)	923
BshFI	GGCC	3 cut(s)	1024, 1219, 1859
BshVI	ATCGAT	3 cut(s)	848, 1002, 1670
BsiEI	CGRYCG	1 cut(s)	923
BsiHKAI	GWGCWC	1 cut(s)	570
BsiSI	CCGG	1 cut(s)	1242
BslFI	GGGAC	1 cut(s)	235
BslI	CCNNNNNNNGG	3 cut(s)	29, 302, 1405
BsmAI	GTCTC	3 cut(s)	185, 977, 1609
BsmFI	GGGAC	1 cut(s)	235
BsmI	GAATGC	1 cut(s)	292
BsnI	GGCC	3 cut(s)	1024, 1219, 1859
Bso31I	GGTCTC	1 cut(s)	977
Bsp119I	TTCGAA	1 cut(s)	1932
Bsp1286I	GDGCHC	1 cut(s)	570
Bsp1720I	GCTNAGC	1 cut(s)	1920
Bsp68I	TCGCGA	1 cut(s)	925
BspACI	CCGC	8 cut(s)	27, 293, 684, 818, 887, 1145, 1171, 1220
BspANI	GGCC	3 cut(s)	1024, 1219, 1859
BspCNI	CTCAG	4 cut(s)	95, 271, 1632, 1912
BspDI	ATCGAT	3 cut(s)	848, 1002, 1670
BspFNI	CGCG	3 cut(s)	684, 733, 925
BspOI	GCTAGC	2 cut(s)	99, 432
BspPI	GGATC	2 cut(s)	1068, 1182
BspQI	GCTCTTC	1 cut(s)	1947
BspT104I	TTCGAA	1 cut(s)	1932
BspTNI	GGTCTC	1 cut(s)	977
BsrBI	CCGCTC	1 cut(s)	1171
BsrDI	GCAATG	1 cut(s)	73
BsrI	ACTGG	3 cut(s)	1092, 1277, 1736
Bst2UI	CCWGG	2 cut(s)	303, 1149
Bst4CI	ACNGT	3 cut(s)	439, 1606, 1969
Bst6I	CTCTTC	6 cut(s)	94, 183, 324, 355, 1578, 1947
BstAPI	GCANNNNNTGC	3 cut(s)	215, 1112, 1469
BstBI	TTCGAA	1 cut(s)	1932
BstC8I	GCNNGC	5 cut(s)	97, 430, 521, 686, 1196
BstDEI	CTNAG	9 cut(s)	82, 111, 279, 581, 711, 799, 1155, 1619, 1920
BstEII	GGTNACC	1 cut(s)	820
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	3 cut(s)	331, 1025, 1528
BstFNI	CGCG	3 cut(s)	684, 733, 925
BstHHI	GCGC	4 cut(s)	496, 684, 1194, 1914
BstMAI	GTCTC	3 cut(s)	185, 977, 1609
BstMCI	CGRYCG	1 cut(s)	923
BstMWI	GCNNNNNNNGC	3 cut(s)	215, 1112, 1469
BstNI	CCWGG	2 cut(s)	303, 1149
BstNSI	RCATGY	1 cut(s)	523
BstPI	GGTNACC	1 cut(s)	820
BstSCI	CCNGG	2 cut(s)	301, 1147
BstSFI	CTRYAG	2 cut(s)	1602, 1710
BstUI	CGCG	3 cut(s)	684, 733, 925
BstV1I	GCAGC	7 cut(s)	25, 221, 356, 1019, 1099, 1102, 1475
BstV2I	GAAGAC	1 cut(s)	1429
BstX2I	RGATCY	2 cut(s)	1060, 1174
BstXI	CCANNNNNNTGG	1 cut(s)	1099
BstYI	RGATCY	2 cut(s)	1060, 1174
Bsu15I	ATCGAT	3 cut(s)	848, 1002, 1670
BsuRI	GGCC	3 cut(s)	1024, 1219, 1859
BsuTUI	ATCGAT	3 cut(s)	848, 1002, 1670
BtrI	CACGTC	1 cut(s)	955
BtsCI	GGATG	3 cut(s)	331, 1025, 1528
BtsIMutI	CAGTG	3 cut(s)	1099, 1290, 1743
BtuMI	TCGCGA	1 cut(s)	925
Cac8I	GCNNGC	5 cut(s)	97, 430, 521, 686, 1196
CfoI	GCGC	4 cut(s)	496, 684, 1194, 1914
Cfr13I	GGNCC	3 cut(s)	884, 1022, 1285
ClaI	ATCGAT	3 cut(s)	848, 1002, 1670
Csp6I	GTAC	2 cut(s)	1159, 1639
CviAII	CATG	7 cut(s)	520, 637, 663, 1121, 1189, 1313, 1510
CviQI	GTAC	2 cut(s)	1159, 1639
DdeI	CTNAG	9 cut(s)	82, 111, 279, 581, 711, 799, 1155, 1619, 1920
DraIII	CACNNNGTG	1 cut(s)	1819
EaeI	YGGCCR	2 cut(s)	1217, 1857
Eam1104I	CTCTTC	6 cut(s)	94, 183, 324, 355, 1578, 1947
EarI	CTCTTC	6 cut(s)	94, 183, 324, 355, 1578, 1947
EciI	GGCGGA	1 cut(s)	1134
Eco31I	GGTCTC	1 cut(s)	977
Eco47I	GGWCC	2 cut(s)	884, 1285
Eco57I	CTGAAG	2 cut(s)	75, 854
Eco91I	GGTNACC	1 cut(s)	820
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoO65I	GGTNACC	1 cut(s)	820
EcoRI	GAATTC	2 cut(s)	837, 1648
EcoRII	CCWGG	2 cut(s)	301, 1147
EcoT22I	ATGCAT	1 cut(s)	1318
FaeI	CATG	7 cut(s)	523, 640, 666, 1124, 1192, 1316, 1513
FaqI	GGGAC	1 cut(s)	235
FatI	CATG	7 cut(s)	519, 636, 662, 1120, 1188, 1312, 1509
FauI	CCCGC	2 cut(s)	677, 1164
FauNDI	CATATG	1 cut(s)	1534
FbaI	TGATCA	1 cut(s)	675
FblI	GTMKAC	1 cut(s)	1206
Fnu4HI	GCNGC	8 cut(s)	14, 210, 370, 1008, 1113, 1116, 1220, 1464
FokI	GGATG	3 cut(s)	338, 1012, 1515
Fsp4HI	GCNGC	8 cut(s)	14, 210, 370, 1008, 1113, 1116, 1220, 1464
FspBI	CTAG	7 cut(s)	24, 96, 195, 429, 1014, 1365, 1403
FspI	TGCGCA	2 cut(s)	1193, 1913
GlaI	GCGC	4 cut(s)	495, 683, 1193, 1913
GluI	GCNGC	8 cut(s)	14, 210, 370, 1008, 1113, 1116, 1220, 1464
GsuI	CTGGAG	2 cut(s)	285, 1669
HaeIII	GGCC	3 cut(s)	1024, 1219, 1859
HapII	CCGG	1 cut(s)	1242
HhaI	GCGC	4 cut(s)	496, 684, 1194, 1914
Hin1II	CATG	7 cut(s)	523, 640, 666, 1124, 1192, 1316, 1513
Hin6I	GCGC	4 cut(s)	494, 682, 1192, 1912
HinP1I	GCGC	4 cut(s)	494, 682, 1192, 1912
HincII	GTYRAC	3 cut(s)	1207, 1252, 1351
HindII	GTYRAC	3 cut(s)	1207, 1252, 1351
HindIII	AAGCTT	2 cut(s)	962, 1426
HpaII	CCGG	1 cut(s)	1242
HphI	GGTGA	8 cut(s)	44, 176, 571, 814, 1081, 1291, 1556, 1837
Hpy166II	GTNNAC	6 cut(s)	167, 1207, 1252, 1288, 1351, 1639
Hpy188I	TCNGA	9 cut(s)	7, 85, 651, 795, 873, 1324, 1478, 1572, 1647
Hpy8I	GTNNAC	6 cut(s)	167, 1207, 1252, 1288, 1351, 1639
Hpy99I	CGWCG	1 cut(s)	1142
HpyCH4III	ACNGT	3 cut(s)	439, 1606, 1969
HpyCH4IV	ACGT	3 cut(s)	954, 1137, 1230
HpyF10VI	GCNNNNNNNGC	3 cut(s)	215, 1112, 1469
HpyF3I	CTNAG	9 cut(s)	82, 111, 279, 581, 711, 799, 1155, 1619, 1920
HpySE526I	ACGT	3 cut(s)	954, 1137, 1230
Hsp92II	CATG	7 cut(s)	523, 640, 666, 1124, 1192, 1316, 1513
HspAI	GCGC	4 cut(s)	494, 682, 1192, 1912
Ksp22I	TGATCA	1 cut(s)	675
LguI	GCTCTTC	1 cut(s)	1947
LmnI	GCTCC	2 cut(s)	1147, 1168
Lsp1109I	GCAGC	7 cut(s)	25, 221, 356, 1019, 1099, 1102, 1475
LweI	GCATC	6 cut(s)	205, 697, 812, 994, 1696, 1813
MaeI	CTAG	7 cut(s)	24, 96, 195, 429, 1014, 1365, 1403
MaeII	ACGT	3 cut(s)	954, 1137, 1230
MaeIII	GTNAC	5 cut(s)	820, 955, 1336, 1360, 1544
MbiI	CCGCTC	1 cut(s)	1171
MfeI	CAATTG	1 cut(s)	1722
MflI	RGATCY	2 cut(s)	1060, 1174
MhlI	GDGCHC	1 cut(s)	570
MlyI	GAGTC	4 cut(s)	80, 257, 655, 1611
MmeI	TCCRAC	1 cut(s)	31
Mph1103I	ATGCAT	1 cut(s)	1318
MroXI	GAANNNNTTC	2 cut(s)	171, 1566
MseI	TTAA	5 cut(s)	348, 776, 1134, 1730, 1850
MslI	CAYNNNNRTG	5 cut(s)	524, 766, 953, 1391, 1533
MspA1I	CMGCKG	2 cut(s)	212, 1222
MspI	CCGG	1 cut(s)	1242
MspR9I	CCNGG	2 cut(s)	303, 1149
MunI	CAATTG	1 cut(s)	1722
Mva1269I	GAATGC	1 cut(s)	292
MvaI	CCWGG	2 cut(s)	303, 1149
MvnI	CGCG	3 cut(s)	684, 733, 925
MwoI	GCNNNNNNNGC	3 cut(s)	215, 1112, 1469
NdeI	CATATG	1 cut(s)	1534
NheI	GCTAGC	2 cut(s)	95, 428
NlaIII	CATG	7 cut(s)	523, 640, 666, 1124, 1192, 1316, 1513
NmuCI	GTSAC	4 cut(s)	820, 955, 1360, 1544
NruI	TCGCGA	1 cut(s)	925
NsbI	TGCGCA	2 cut(s)	1193, 1913
NsiI	ATGCAT	1 cut(s)	1318
NspI	RCATGY	1 cut(s)	523
NspV	TTCGAA	1 cut(s)	1932
PaeI	GCATGC	1 cut(s)	523
PciSI	GCTCTTC	1 cut(s)	1947
PctI	GAATGC	1 cut(s)	292
PdmI	GAANNNNTTC	2 cut(s)	171, 1566
PfeI	GAWTC	7 cut(s)	159, 454, 652, 715, 845, 1502, 1997
PkrI	GCNGC	8 cut(s)	15, 211, 371, 1009, 1114, 1117, 1221, 1465
Ple19I	CGATCG	1 cut(s)	923
PleI	GAGTC	4 cut(s)	80, 256, 654, 1611
PpsI	GAGTC	4 cut(s)	80, 256, 654, 1611
Psp6I	CCWGG	2 cut(s)	301, 1147
PspEI	GGTNACC	1 cut(s)	820
PspGI	CCWGG	2 cut(s)	301, 1147
PspPI	GGNCC	3 cut(s)	884, 1022, 1285
PsuI	RGATCY	2 cut(s)	1060, 1174
PvuI	CGATCG	1 cut(s)	923
PvuII	CAGCTG	1 cut(s)	212
RruI	TCGCGA	1 cut(s)	925
RsaI	GTAC	2 cut(s)	1160, 1640
RsaNI	GTAC	2 cut(s)	1159, 1639
RseI	CAYNNNNRTG	5 cut(s)	524, 766, 953, 1391, 1533
SalI	GTCGAC	1 cut(s)	1205
SapI	GCTCTTC	1 cut(s)	1947
SaqAI	TTAA	5 cut(s)	348, 776, 1134, 1730, 1850
SatI	GCNGC	8 cut(s)	14, 210, 370, 1008, 1113, 1116, 1220, 1464
Sau96I	GGNCC	3 cut(s)	884, 1022, 1285
SchI	GAGTC	4 cut(s)	80, 257, 655, 1611
ScrFI	CCNGG	2 cut(s)	303, 1149
SduI	GDGCHC	1 cut(s)	570
SfaNI	GCATC	6 cut(s)	205, 697, 812, 994, 1696, 1813
SfcI	CTRYAG	2 cut(s)	1602, 1710
SfuI	TTCGAA	1 cut(s)	1932
SinI	GGWCC	2 cut(s)	884, 1285
SmiMI	CAYNNNNRTG	5 cut(s)	524, 766, 953, 1391, 1533
SmlI	CTYRAG	2 cut(s)	1180, 1612
SmoI	CTYRAG	2 cut(s)	1180, 1612
SpeI	ACTAGT	2 cut(s)	194, 1013
SphI	GCATGC	1 cut(s)	523
SsiI	CCGC	8 cut(s)	27, 293, 684, 818, 887, 1145, 1171, 1220
SspI	AATATT	1 cut(s)	1799
SspMI	CTAG	7 cut(s)	24, 96, 195, 429, 1014, 1365, 1403
StyD4I	CCNGG	2 cut(s)	301, 1147
TaaI	ACNGT	3 cut(s)	439, 1606, 1969
TaiI	ACGT	3 cut(s)	957, 1140, 1233
TatI	WGTACW	2 cut(s)	1158, 1638
TauI	GCSGC	1 cut(s)	1222
TfiI	GAWTC	7 cut(s)	159, 454, 652, 715, 845, 1502, 1997
Tru1I	TTAA	5 cut(s)	348, 776, 1134, 1730, 1850
Tru9I	TTAA	5 cut(s)	348, 776, 1134, 1730, 1850
TscAI	CASTG	3 cut(s)	1099, 1297, 1743
TseFI	GTSAC	4 cut(s)	820, 955, 1360, 1544
TseI	GCWGC	7 cut(s)	13, 209, 369, 1007, 1112, 1115, 1463
Tsp45I	GTSAC	4 cut(s)	820, 955, 1360, 1544
TspRI	CASTG	3 cut(s)	1099, 1297, 1743
VpaK11BI	GGWCC	2 cut(s)	884, 1285
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	6 cut(s)	220, 809, 837, 1648, 1906, 1944
XceI	RCATGY	1 cut(s)	523
XcmI	CCANNNNNNNNNTGG	1 cut(s)	715
XmiI	GTMKAC	1 cut(s)	1206
XmnI	GAANNNNTTC	2 cut(s)	171, 1566
XspI	CTAG	7 cut(s)	24, 96, 195, 429, 1014, 1365, 1403
Zsp2I	ATGCAT	1 cut(s)	1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.