Rorug06G0158300

Mechanosensitive ion channel protein 10-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
22627607 .. 22631742
4136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0158300.1

Sequence Viewer

Length: 3576 bp
ATGGAGATGGCGTCAACCTCTTCTCGTCGTCAATGGAAATACGATGTGTTTCTAAGTTTCAGGGGGGAAGATACCCGCAAGGGTTTTACCGAGTATCTGTATTCTGTACTAACTCAGAGAGGAATCGTCACCTTTCGGGATGACCGAGAGCTTGAGAGAGGAAAATCCATTAGGCCTGAACTTTTAGCTGCAATTGAGGTGTCTAGATCTGCGATTGTCATTCTCTCCCCCAGATATGCTTCTTCGTCGTGGTGCTTGGATGAACTCGTCAAGATTATTCAATGCATGAAAGAGATGGGCCAACAAGTCTTCCCCATCTTCTACGGTGTGGATCCTTCTTCTGTTAGGCACCACAGGCGTTTTGAGCTCAAATGGGAACCCGAAGTGAGGGAACATGAAGAAGTTTATAGGAAGAATGAGGAGAGACTAAATGCGTGGAGAGCTGCTTTAACTGAGGTCGCCAATCTTTCTGGCTGGGATTTCAAGAATTATTCAACTGTAACAAAACTAATTGAGGAAATTGCTAATCATATGCTAAAGAAGTCCGTGTATGCATCTTCAAGTGTTGACAAGGGCTTCATCGGAATGGATTCCCGCATTCATGACTTATTAAGAAATTACATACGTCCACAGCTTGGTGGGGTGCGTTTTATAGGGATCCATGGCATGCGGGGCATAGGTAAGACAACACTTGCTCGAGCTATCCATGATGAAATTTGTCAGGATTTTTACCGAACCTGCTTTCTTTCCAATGTTAGAGAAACGTCCAAAAACAATGGCCTAGTTTCTCTACAAGAAAAACTTCTTTCCATAATCCAGAAGGCAAAAGTTGAAAATATAGAGGATGAATACACAGGAGCTGCTATGATAGAAAGGGTGTTGGGTAGAATGAAGGTGCTTGTTGTTATTGATGATGTGGATCAGTTGACACAATTAGATAAATTGGCTGGAAGTCGCAACTGGTTTGGTCCAGGGAGTAGAATTATCATAACCACCACAGATGTTCAGTTGTTAAAGGCTCATGGTGTTGATGCTACATACAAGGCTGACGGGTTAAACTGTGATGAAGCACTTCAACTTTTGAGTTTGAAGGCTTTTAAGAAATGTCCCCCACCAGAAGATTATTTGCATCTGTGCTACCATATTTTAGGGTATGCTCAGGGGCTTCCGTTGGCTCTTGTGGTTTTAGGTTCTTTTCTATTTGGTCGAAGCGCTGACGAATGGGCAAGTGCAATAGATAGGCTAAAGTACACACCACATAAACGCATTACTGAGGTGCTTCGGATTAGTTTTGATGGACTGGACCAAAAAGACAAAGAAATATTCCTACATATCGCTTGCTTTTACAAGGGGAAGGATAAGGATCGTGTGACACAAATACTAGACTATTGCCAGCTAAACCCTGTCATTGGTTTAAGTGTTCTTGCTGATAGATCTCTCATAACTATCTCCAACAACGAACTGTCGATGCATGATTTGCTACAAGAAACGGGCTGGGAAATTGTTCGTGAACAGTCTCCTACAGATCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCAACAATGTGCTGAAGAATAATAAGGGAACAGATTCAATCCAAGGCATGGTAATGGAGTTGACTAAATTACAAGTGGCTCATTGGGAGCCAGAAGCCTTTTCAAATTTGTCTCAACTTAGTCTTCTCCATATTCGTAATGTGGACCTTCCCAAAGGCCTCACTTGTCTTTCTAATTCCTTGAGACTCCTCGAATGGACTGGGTGTCCCTTAAGATCTCTCCCAAAAAAATTTAAAGCAGATGAACTTATTGAACTTAACTTGTGCCACAGCAACATTAAACAGCTTTGGAAGGGAACAAAGAATTTCGACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAACATTGCGGAGACCCCAGACCTCGCAGGGGTTCAGAATCTTGAGACTTTAGATCTTGAAGGATGTGAGAATTTGGTAAGAATCCATCAATCCCTTGGATTTCTCAAAAAGCTTATTTTCCTGAATCTTAAAGACTGCAAAAGTCTCAAGAGTCTGCCAAGTAGAATTGAAATGGAATCTCTTGAAACATTAATTCTTTCTAACTGCTCAAAAGTTAAGAAGATTCCTGAGTTTGTTGGAAATATGGAATGTTTATCGATGCTTTATCTTGATGAGACTGCCATTAAGGAACTGCCTGTTTCAATTGAACGGCTGAGTGGCCTTGTGTCATTGAATCTAAGAAACTGCAGAAATCTTGTCTGTCTTCCGAGCACCATCAACAAATTGAAGTCTATTAAAAAACTTACTCTTTCTGGATGCTTGAAACTCGGCAAACATCAGGTGAATGTGGGGGAGATGGATTGTTTTGAGGAAAATAATGTGAATAGTGGGTCTGCAATAGAAATGTCATCTACCCATGGTCTCATAAAATATGTGAGAGGTTCAATCTTTCATGGATGTGAAGTAGTTTGGGGATCTTTAAGTAAGCTCTTGCCTTCTGGATTGGTGCAAAAAGTGAATACAGAGCCAATGAGTTTCTGCTTGCCTATATCTGGTCTCTGTAATTTAACATATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAACGAATTTGGTTACTTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTTGTTCGTCTTCCTTCAGGCATTGGATTGCTTTCTAAGCTTGAGAACTTTAACTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCAGACCTTCCATCAAATAGTATACTAGATTTAAGGGCAGATGGTTGTACTTCACTGAAATACTTGTTTGATGCGTCAAATTTGAACAGATTAAACAAATCATATTTCAATTTCATCAACTGCTTCAGTCTAAATGGCAATCAAGGATGCAATAACATAGCATTTGAAATGCTGAAGACATTCATGTATCAGGGAATCTCTAATAAGAGGGAAACTTTTCAAATTGTAATTCCTGGAAGTAATATTCATGAGTGGTTCAGCCATCAGAGTGTTGGGTGTTCATTAAGTGTATATCTACCTGTACATTGGAATAACAGTCGGTTTTTGGGATTTGCTTTGTGTGCTGTTTTTGTACTCCATGAACACCATCCGGTGGATTCGCTTTATATAAATGAATTCAAGACTTTTAATGCAACACATCATCTTGTATGTTGCCTGAAGCTCGATGGAACAGAATTGGAAGTATATGGCAGACAGCCTGCATTTCGCTTTAGTGAAGAATTTTGCCAGGTTGAATCAGATCACCTGTGGCTATTCTATGTATCTCGTGATAAATACTTTGGTACAGAGTGGTGGCATAACAGTTGCAGTCAGCTTGAGTTCTTATTTGAAACCAGAGGGCTGGGTCTGAAGGTGAAGGAGTGTGGAGTCCGTCTGATATATGAGCAAGAAGTGCAAGAGTCGAACCAAACAACCACTCAATCAAGCAGTAGGATGTCTCCTTATGAGGATATATTGATTGGTTTTGACATTCCAGTTGCAGGGGAAACCAGTGGCACTGGTAGCAGAACTTGCACGCTTGAAGAATTGTAG

Protein Analysis

1191

Amino Acids

135.19

Weight (kDa)

6.71

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 13 - 188 5.1e-50 TIR domain
TIR_2 PF13676 16 - 124 2.4e-13 TIR domain
NB-ARC PF00931 214 - 368 1.9e-18 NB-ARC domain
AAA_22 PF13401 216 - 310 7.6e-07 AAA domain
NACHT PF05729 218 - 316 4.1e-07 NACHT domain
WHD_ROQ1 PF23282 436 - 506 3.5e-22 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 695 - 780 4e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 706 - 775 3.4e-09 Leucine-rich repeat region
C-JID PF20160 998 - 1147 1.1e-17 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 746
AccB1I GGYRCC 1 cut(s) 348
AccB7I CCANNNNNTGG 3 cut(s) 635, 1612, 3136
AccI GTMKAC 1 cut(s) 2785
AciI CCGC 4 cut(s) 76, 595, 670, 1916
AclWI GGATC 8 cut(s) 326, 339, 652, 665, 927, 1371, 1520, 2491
AcsI RAATTY 9 cut(s) 714, 1669, 1793, 1867, 1978, 2630, 2842, 3158, 3263
AcuI CTGAAG 6 cut(s) 1598, 2679, 2872, 2957, 3221, 3413
AcyI GRCGYC 1 cut(s) 11
AfaI GTAC 6 cut(s) 108, 1250, 2812, 3066, 3117, 3328
AfeI AGCGCT 1 cut(s) 1213
AfiI CCNNNNNNNGG 8 cut(s) 387, 635, 1409, 1612, 1936, 2561, 3136, 3524
AflII CTTAAG 1 cut(s) 1774
AhdI GACNNNNNGTC 1 cut(s) 1767
AjnI CCWGG 4 cut(s) 970, 1528, 2995, 3270
AjuI GAANNNNNNNTTGG 2 cut(s) 2717, 2749
Alw21I GWGCWC 2 cut(s) 369, 2282
AlwI GGATC 8 cut(s) 326, 339, 652, 665, 927, 1371, 1520, 2491
AlwNI CAGNNNCTG 1 cut(s) 860
Ama87I CYCGRG 1 cut(s) 696
Aor51HI AGCGCT 1 cut(s) 1213
AoxI GGCC 5 cut(s) 173, 298, 778, 1720, 2227
ApeKI GCWGC 3 cut(s) 188, 443, 860
ApoI RAATTY 9 cut(s) 714, 1669, 1793, 1867, 1978, 2630, 2842, 3158, 3263
AseI ATTAAT 1 cut(s) 2099
Asp700I GAANNNNTTC 7 cut(s) 589, 801, 1071, 1503, 1597, 2942, 2979
AspLEI GCGC 1 cut(s) 1214
AspS9I GGNCC 4 cut(s) 298, 968, 1303, 1708
AsuHPI GGTGA 6 cut(s) 121, 2362, 2621, 2665, 3278, 3409
AvaI CYCGRG 1 cut(s) 696
AvaII GGWCC 3 cut(s) 968, 1303, 1708
BamHI GGATCC 2 cut(s) 331, 657
BanI GGYRCC 1 cut(s) 348
BanII GRGCYC 1 cut(s) 369
BauI CACGAG 1 cut(s) 3309
BbsI GAAGAC 6 cut(s) 301, 1566, 1679, 2264, 2681, 2945
Bbv12I GWGCWC 2 cut(s) 369, 2282
BbvI GCAGC 3 cut(s) 175, 430, 847
BceAI ACGGC 1 cut(s) 2234
BciT130I CCWGG 4 cut(s) 972, 1530, 2997, 3272
BfaI CTAG 4 cut(s) 204, 782, 1382, 2789
BfmI CTRYAG 2 cut(s) 1521, 2254
BfoI RGCGCY 1 cut(s) 1215
BfrI CTTAAG 1 cut(s) 1774
BfuAI ACCTGC 1 cut(s) 746
BglII AGATCT 4 cut(s) 206, 1433, 1778, 1960
BisI GCNGC 3 cut(s) 189, 444, 861
BlsI GCNGC 3 cut(s) 190, 445, 862
Bme1390I CCNGG 4 cut(s) 972, 1530, 2997, 3272
Bme18I GGWCC 3 cut(s) 968, 1303, 1708
BmeRI GACNNNNNGTC 1 cut(s) 1767
BmeT110I CYCGRG 1 cut(s) 696
BmgT120I GGNCC 4 cut(s) 298, 968, 1303, 1708
BmiI GGNNCC 5 cut(s) 333, 350, 378, 659, 1653
BmrFI CCNGG 4 cut(s) 972, 1530, 2997, 3272
BmrI ACTGGG 1 cut(s) 1773
BmsI GCATC 8 cut(s) 563, 1021, 1138, 1458, 2157, 2315, 2824, 2900
BmuI ACTGGG 1 cut(s) 1773
BpiI GAAGAC 6 cut(s) 301, 1566, 1679, 2264, 2681, 2945
Bpu10I CCTNAGC 1 cut(s) 1158
BpuEI CTTGAG 6 cut(s) 173, 1765, 1970, 2039, 2741, 3380
Bsa29I ATCGAT 1 cut(s) 2165
BsaBI GATNNNNATC 2 cut(s) 918, 1362
BsaHI GRCGYC 1 cut(s) 11
BsaI GGTCTC 4 cut(s) 1557, 1913, 2435, 2570
BsaJI CCNNGG 5 cut(s) 661, 971, 1606, 2002, 2425
BsaWI WCCGGW 1 cut(s) 3133
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 8 cut(s) 387, 635, 1409, 1612, 1936, 2561, 3136, 3524
Bse1I ACTGG 6 cut(s) 965, 1305, 1768, 3518, 3534, 3547
Bse3DI GCAATG 1 cut(s) 1911
Bse8I GATNNNNATC 2 cut(s) 918, 1362
BseBI CCWGG 4 cut(s) 972, 1530, 2997, 3272
BseCI ATCGAT 1 cut(s) 2165
BseDI CCNNGG 5 cut(s) 661, 971, 1606, 2002, 2425
BseGI GGATG 9 cut(s) 145, 265, 850, 1976, 2330, 2471, 2915, 3130, 3483
BseJI GATNNNNATC 2 cut(s) 918, 1362
BseLI CCNNNNNNNGG 8 cut(s) 387, 635, 1409, 1612, 1936, 2561, 3136, 3524
BseMI GCAATG 1 cut(s) 1911
BseMII CTCAG 7 cut(s) 128, 444, 1172, 1263, 2127, 2213, 2582
BseNI ACTGG 6 cut(s) 965, 1305, 1768, 3518, 3534, 3547
BseRI GAGGAG 2 cut(s) 434, 1742
BseXI GCAGC 3 cut(s) 175, 430, 847
BseYI CCCAGC 3 cut(s) 474, 1494, 3385
BshFI GGCC 5 cut(s) 175, 300, 780, 1722, 2229
BshNI GGYRCC 1 cut(s) 348
BshVI ATCGAT 1 cut(s) 2165
BsiHKAI GWGCWC 2 cut(s) 369, 2282
BsiHKCI CYCGRG 1 cut(s) 696
BsiSI CCGG 1 cut(s) 3134
BslFI GGGAC 2 cut(s) 1092, 1755
BslI CCNNNNNNNGG 8 cut(s) 387, 635, 1409, 1612, 1936, 2561, 3136, 3524
BsmFI GGGAC 2 cut(s) 1092, 1755
BsmI GAATGC 1 cut(s) 597
BsnI GGCC 5 cut(s) 175, 300, 780, 1722, 2229
Bso31I GGTCTC 4 cut(s) 1557, 1913, 2435, 2570
BsoBI CYCGRG 1 cut(s) 696
Bsp1286I GDGCHC 2 cut(s) 369, 2282
Bsp1407I TGTACA 1 cut(s) 3064
Bsp19I CCATGG 2 cut(s) 661, 2425
BspACI CCGC 4 cut(s) 76, 595, 670, 1916
BspANI GGCC 5 cut(s) 175, 300, 780, 1722, 2229
BspCNI CTCAG 7 cut(s) 127, 445, 1171, 1264, 2128, 2214, 2583
BspDI ATCGAT 1 cut(s) 2165
BspHI TCATGA 3 cut(s) 601, 1555, 3010
BspLI GGNNCC 5 cut(s) 333, 350, 378, 659, 1653
BspMAI CTGCAG 1 cut(s) 2258
BspMI ACCTGC 1 cut(s) 746
BspPI GGATC 8 cut(s) 326, 339, 652, 665, 927, 1371, 1520, 2491
BspT107I GGYRCC 1 cut(s) 348
BspTI CTTAAG 1 cut(s) 1774
BspTNI GGTCTC 4 cut(s) 1557, 1913, 2435, 2570
BsrDI GCAATG 1 cut(s) 1911
BsrGI TGTACA 1 cut(s) 3064
BsrI ACTGG 6 cut(s) 965, 1305, 1768, 3518, 3534, 3547
BssECI CCNNGG 5 cut(s) 661, 971, 1606, 2002, 2425
BssNAI GTATAC 1 cut(s) 2786
BssNI GRCGYC 1 cut(s) 11
BssSI CACGAG 1 cut(s) 3309
BssT1I CCWWGG 4 cut(s) 661, 1606, 2002, 2425
Bst1107I GTATAC 1 cut(s) 2786
Bst2BI CACGAG 1 cut(s) 3309
Bst2UI CCWGG 4 cut(s) 972, 1530, 2997, 3272
Bst4CI ACNGT 7 cut(s) 326, 499, 1061, 1464, 1515, 3080, 3347
Bst6I CTCTTC 1 cut(s) 25
BstACI GRCGYC 1 cut(s) 11
BstAFI CTTAAG 1 cut(s) 1774
BstAPI GCANNNNNTGC 3 cut(s) 1477, 3436, 3555
BstAUI TGTACA 1 cut(s) 3064
BstC8I GCNNGC 6 cut(s) 668, 1339, 1394, 2552, 3243, 3560
BstDSI CCRYGG 2 cut(s) 661, 2425
BstEII GGTNACC 1 cut(s) 2653
BstF5I GGATG 9 cut(s) 145, 265, 850, 1976, 2330, 2471, 2915, 3130, 3483
BstH2I RGCGCY 1 cut(s) 1215
BstHHI GCGC 1 cut(s) 1214
BstNI CCWGG 4 cut(s) 972, 1530, 2997, 3272
BstNSI RCATGY 1 cut(s) 670
BstPI GGTNACC 1 cut(s) 2653
BstSCI CCNGG 4 cut(s) 970, 1528, 2995, 3270
BstSFI CTRYAG 2 cut(s) 1521, 2254
BstV1I GCAGC 3 cut(s) 175, 430, 847
BstV2I GAAGAC 6 cut(s) 301, 1566, 1679, 2264, 2681, 2945
BstX2I RGATCY 8 cut(s) 206, 331, 657, 1433, 1525, 1778, 1960, 2483
BstXI CCANNNNNNTGG 1 cut(s) 3385
BstYI RGATCY 8 cut(s) 206, 331, 657, 1433, 1525, 1778, 1960, 2483
BstZ17I GTATAC 1 cut(s) 2786
Bsu15I ATCGAT 1 cut(s) 2165
BsuRI GGCC 5 cut(s) 175, 300, 780, 1722, 2229
BsuTUI ATCGAT 1 cut(s) 2165
BtgI CCRYGG 2 cut(s) 661, 2425
BtsCI GGATG 9 cut(s) 145, 265, 850, 1976, 2330, 2471, 2915, 3130, 3483
BtsIMutI CAGTG 3 cut(s) 2816, 3540, 3541
BveI ACCTGC 1 cut(s) 746
Cac8I GCNNGC 6 cut(s) 668, 1339, 1394, 2552, 3243, 3560
CaiI CAGNNNCTG 1 cut(s) 860
CciI TCATGA 3 cut(s) 601, 1555, 3010
CfoI GCGC 1 cut(s) 1214
Cfr13I GGNCC 4 cut(s) 298, 968, 1303, 1708
ClaI ATCGAT 1 cut(s) 2165
CseI GACGC 1 cut(s) 2826
Csp6I GTAC 6 cut(s) 107, 1249, 2811, 3065, 3116, 3327
CviQI GTAC 6 cut(s) 107, 1249, 2811, 3065, 3116, 3327
DraI TTTAAA 1 cut(s) 1798
DriI GACNNNNNGTC 1 cut(s) 1767
Eam1104I CTCTTC 1 cut(s) 25
Eam1105I GACNNNNNGTC 1 cut(s) 1767
EarI CTCTTC 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 4 cut(s) 661, 1606, 2002, 2425
Eco147I AGGCCT 2 cut(s) 175, 1722
Eco24I GRGCYC 1 cut(s) 369
Eco31I GGTCTC 4 cut(s) 1557, 1913, 2435, 2570
Eco47I GGWCC 3 cut(s) 968, 1303, 1708
Eco47III AGCGCT 1 cut(s) 1213
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 6 cut(s) 1598, 2679, 2872, 2957, 3221, 3413
Eco88I CYCGRG 1 cut(s) 696
Eco91I GGTNACC 1 cut(s) 2653
EcoICRI GAGCTC 1 cut(s) 367
EcoO65I GGTNACC 1 cut(s) 2653
EcoRI GAATTC 1 cut(s) 3158
EcoRII CCWGG 4 cut(s) 970, 1528, 2995, 3270
EcoT14I CCWWGG 4 cut(s) 661, 1606, 2002, 2425
EcoT22I ATGCAT 3 cut(s) 287, 556, 1473
EcoT38I GRGCYC 1 cut(s) 369
ErhI CCWWGG 4 cut(s) 661, 1606, 2002, 2425
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FaqI GGGAC 2 cut(s) 1092, 1755
FauI CCCGC 3 cut(s) 83, 602, 663
FauNDI CATATG 1 cut(s) 531
FblI GTMKAC 1 cut(s) 2785
Fnu4HI GCNGC 3 cut(s) 189, 444, 861
FokI GGATG 9 cut(s) 152, 272, 857, 1983, 2337, 2478, 2922, 3117, 3490
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 3 cut(s) 189, 444, 861
FspBI CTAG 4 cut(s) 204, 782, 1382, 2789
GlaI GCGC 1 cut(s) 1213
GluI GCNGC 3 cut(s) 189, 444, 861
GsaI CCCAGC 3 cut(s) 478, 1498, 3389
HaeII RGCGCY 1 cut(s) 1215
HaeIII GGCC 5 cut(s) 175, 300, 780, 1722, 2229
HapII CCGG 1 cut(s) 3134
HgaI GACGC 1 cut(s) 2826
HhaI GCGC 1 cut(s) 1214
Hin1I GRCGYC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 1212
HinP1I GCGC 1 cut(s) 1212
HincII GTYRAC 4 cut(s) 15, 568, 927, 1626
HindII GTYRAC 4 cut(s) 15, 568, 927, 1626
HindIII AAGCTT 2 cut(s) 2018, 2717
HpaII CCGG 1 cut(s) 3134
HphI GGTGA 6 cut(s) 121, 2362, 2621, 2665, 3278, 3409
Hpy166II GTNNAC 9 cut(s) 15, 568, 629, 927, 1251, 1511, 1626, 1708, 2786
Hpy8I GTNNAC 9 cut(s) 15, 568, 629, 927, 1251, 1511, 1626, 1708, 2786
Hpy99I CGWCG 2 cut(s) 30, 250
HpyCH4III ACNGT 7 cut(s) 326, 499, 1061, 1464, 1515, 3080, 3347
HpyCH4IV ACGT 3 cut(s) 625, 764, 1537
HpySE526I ACGT 3 cut(s) 625, 764, 1537
Hsp92I GRCGYC 1 cut(s) 11
HspAI GCGC 1 cut(s) 1212
LmnI GCTCC 3 cut(s) 857, 1651, 2615
Lsp1109I GCAGC 3 cut(s) 175, 430, 847
LweI GCATC 8 cut(s) 563, 1021, 1138, 1458, 2157, 2315, 2824, 2900
MaeI CTAG 4 cut(s) 204, 782, 1382, 2789
MaeII ACGT 3 cut(s) 625, 764, 1537
MaeIII GTNAC 5 cut(s) 127, 499, 1369, 2636, 2653
MfeI CAATTG 2 cut(s) 192, 2211
MflI RGATCY 8 cut(s) 206, 331, 657, 1433, 1525, 1778, 1960, 2483
MhlI GDGCHC 2 cut(s) 369, 2282
MlyI GAGTC 4 cut(s) 1743, 2068, 3420, 3452
MmeI TCCRAC 2 cut(s) 1476, 2125
Mph1103I ATGCAT 3 cut(s) 287, 556, 1473
MroXI GAANNNNTTC 7 cut(s) 589, 801, 1071, 1503, 1597, 2942, 2979
MslI CAYNNNNRTG 4 cut(s) 584, 1616, 2466, 3030
MspCI CTTAAG 1 cut(s) 1774
MspI CCGG 1 cut(s) 3134
MspR9I CCNGG 4 cut(s) 972, 1530, 2997, 3272
MunI CAATTG 2 cut(s) 192, 2211
Mva1269I GAATGC 1 cut(s) 597
MvaI CCWGG 4 cut(s) 972, 1530, 2997, 3272
NcoI CCATGG 2 cut(s) 661, 2425
NdeI CATATG 1 cut(s) 531
NlaIV GGNNCC 5 cut(s) 333, 350, 378, 659, 1653
NmeAIII GCCGAG 1 cut(s) 2316
NmuCI GTSAC 3 cut(s) 127, 1369, 2653
NsiI ATGCAT 3 cut(s) 287, 556, 1473
NspI RCATGY 1 cut(s) 670
PaeI GCATGC 1 cut(s) 670
PaeR7I CTCGAG 1 cut(s) 696
PagI TCATGA 3 cut(s) 601, 1555, 3010
PceI AGGCCT 2 cut(s) 175, 1722
PcsI WCGNNNNNNNCGW 1 cut(s) 142
PctI GAATGC 1 cut(s) 597
PdmI GAANNNNTTC 7 cut(s) 589, 801, 1071, 1503, 1597, 2942, 2979
PflMI CCANNNNNTGG 3 cut(s) 635, 1612, 3136
PfoI TCCNGGA 1 cut(s) 2995
PkrI GCNGC 3 cut(s) 190, 445, 862
PleI GAGTC 4 cut(s) 1743, 2067, 3419, 3451
PpsI GAGTC 4 cut(s) 1743, 2067, 3419, 3451
PshBI ATTAAT 1 cut(s) 2099
Psp124BI GAGCTC 1 cut(s) 369
Psp6I CCWGG 4 cut(s) 970, 1528, 2995, 3270
PspEI GGTNACC 1 cut(s) 2653
PspFI CCCAGC 3 cut(s) 474, 1494, 3385
PspGI CCWGG 4 cut(s) 970, 1528, 2995, 3270
PspN4I GGNNCC 5 cut(s) 333, 350, 378, 659, 1653
PspPI GGNCC 4 cut(s) 298, 968, 1303, 1708
PspXI VCTCGAGB 1 cut(s) 696
PstI CTGCAG 1 cut(s) 2258
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 8 cut(s) 206, 331, 657, 1433, 1525, 1778, 1960, 2483
RsaI GTAC 6 cut(s) 108, 1250, 2812, 3066, 3117, 3328
RsaNI GTAC 6 cut(s) 107, 1249, 2811, 3065, 3116, 3327
RseI CAYNNNNRTG 4 cut(s) 584, 1616, 2466, 3030
SacI GAGCTC 1 cut(s) 369
SatI GCNGC 3 cut(s) 189, 444, 861
Sau96I GGNCC 4 cut(s) 298, 968, 1303, 1708
SchI GAGTC 4 cut(s) 1743, 2068, 3420, 3452
ScrFI CCNGG 4 cut(s) 972, 1530, 2997, 3272
SduI GDGCHC 2 cut(s) 369, 2282
SfaNI GCATC 8 cut(s) 563, 1021, 1138, 1458, 2157, 2315, 2824, 2900
SfcI CTRYAG 2 cut(s) 1521, 2254
Sfr274I CTCGAG 1 cut(s) 696
SinI GGWCC 3 cut(s) 968, 1303, 1708
SlaI CTCGAG 1 cut(s) 696
SmiMI CAYNNNNRTG 4 cut(s) 584, 1616, 2466, 3030
SmlI CTYRAG 8 cut(s) 152, 696, 1744, 1774, 1949, 2054, 2720, 3359
SmoI CTYRAG 8 cut(s) 152, 696, 1744, 1774, 1949, 2054, 2720, 3359
SphI GCATGC 1 cut(s) 670
SseBI AGGCCT 2 cut(s) 175, 1722
SsiI CCGC 4 cut(s) 76, 595, 670, 1916
SspI AATATT 2 cut(s) 1323, 3007
SspMI CTAG 4 cut(s) 204, 782, 1382, 2789
SstI GAGCTC 1 cut(s) 369
StuI AGGCCT 2 cut(s) 175, 1722
StyD4I CCNGG 4 cut(s) 970, 1528, 2995, 3270
StyI CCWWGG 4 cut(s) 661, 1606, 2002, 2425
TaaI ACNGT 7 cut(s) 326, 499, 1061, 1464, 1515, 3080, 3347
TaiI ACGT 3 cut(s) 628, 767, 1540
TaqI TCGA 8 cut(s) 697, 1207, 1466, 1755, 1872, 2165, 3207, 3446
TaqII GACCGA 1 cut(s) 159
TatI WGTACW 5 cut(s) 106, 1248, 2810, 3064, 3115
TscAI CASTG 3 cut(s) 2823, 3541, 3547
TseFI GTSAC 3 cut(s) 127, 1369, 2653
TseI GCWGC 3 cut(s) 188, 443, 860
Tsp45I GTSAC 3 cut(s) 127, 1369, 2653
TspGWI ACGGA 3 cut(s) 535, 1158, 3404
TspRI CASTG 3 cut(s) 2823, 3541, 3547
Van91I CCANNNNNTGG 3 cut(s) 635, 1612, 3136
Vha464I CTTAAG 1 cut(s) 1774
VpaK11BI GGWCC 3 cut(s) 968, 1303, 1708
VspI ATTAAT 1 cut(s) 2099
XapI RAATTY 9 cut(s) 714, 1669, 1793, 1867, 1978, 2630, 2842, 3158, 3263
XbaI TCTAGA 1 cut(s) 203
XceI RCATGY 1 cut(s) 670
XcmI CCANNNNNNNNNTGG 2 cut(s) 2000, 3032
XhoI CTCGAG 1 cut(s) 696
XmiI GTMKAC 1 cut(s) 2785
XmnI GAANNNNTTC 7 cut(s) 589, 801, 1071, 1503, 1597, 2942, 2979
XspI CTAG 4 cut(s) 204, 782, 1382, 2789
Zsp2I ATGCAT 3 cut(s) 287, 556, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.