Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

10191621 .. 10193768

Gene Structure 2148 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0062300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGGAAAGAACAAAAACAAATCAAACACCAGCAGTAGTAGTTCAGAAATGGGAGGAAAGCATGCTCAAACTGATTTAGGCGTCAAACCATCAAGCACCGTCTTCGCAAAATTTGAAGAAGAATCATCATCATCAGTTTCACTTGCACCACGAGCACGTAATGAAGCAGACCAACAACAACATGCCGTATCTCTCAAGAGTCTCAACGTCAAAGAGGCACCGATTGTGTCTTCCTACAACGACAAAATCCGTCCCCTCCTAGATGCCGTTGACAAGCTCCGTAACCTGATGGTTATGGAAGAAGGGATCCAGCTCCCCACTATTGTCGTCGTCGGAGACCAATCATCTGGAAAGTCTAGCGTCCTGGAATCCCTCGCGAGCATCAGCTTGCCACGTGGACAAGGTATCTGCACCAGGGTGCCTCTTATAATGAGGCTTCAACACCATTCAAGTTCAGAACCGGAGCTTTCCTTGGAATACAATGGTAAAGTTGAGCGCACTGATGAGGCCAGAGTTGCTGAAGATATTGTTAAAGCGACTGATGATATCGCAGGTGGAGGTAAGGGTATCTCTAACACGCCTTTAACTCTGTTAGTGAAGAAGAATGGTGTTCCGGATTTAACAATGGTGGATCTCCCTGGAATCACCAGAGTTCCTGTTCATGGTCAGCCTGAGAATATCTATGACCAGATCAAAGATATGATCATGGAATATATAAATCCTGAACAGAGTATCATTCTGAATGTATTATCGGCTACTGTCGATTTTACCACTTGTGAATCAATTAGGATGTCACAGAGTGTGGACAAAACTGGTGAGAGGACTCTTGCTGTGGTTACAAAAGTTGACAAGGCACCGGAGGGACTTGTAGAGAAAGTAACAGGTGATGATGTCAACATAGGGCTTGGCTATGTCTGTGTCAGGAATAGGATTGGAGAGGAAACCTATGAGGAGGCAAGGGCTTTCTCTGACCAACTATTCCAAACTCATCCTCTGCTTTCTAAAATTGATAAATCCATGGTTGGAGTTCATGTTTTAGCACAGAAGTTGGTGCAAATTCAAGCTACAAGTATAGCCAGGAGCTTACCTGAGATCGTGAAGAAGATAGATGACAAGCTGAATTTTTGTCTTTCGGAGCTGAACAAACTGCCTAAAGGTCTTTCATCTTTTGCTGAGGCGATAACGGCTTTCATGCAGATAATTGGATCGTCGAAAGAATCGCTTAGTAAAATTCTTGTGAGAGGAGAATTTGATGAGTACCCAGAAGAGAAGCACAAGCATGGGACCGCTAGACTGGTTGAATTGCTTAATCAGTATTCTGAAGAACTGCACGAGTGTGATGGAACTGATGTCGCAAGTAATTTCTTGATGCAGGAGATTAGGGTTTTAGGGGAGGCAAAACGTATGAGTCTTCCAAATTTTCTTCCCCGCAGTGCTTTTCTGGTTATTTTGCAGGGAAAAGTGAAGGGAATTTCGAGTATTCCAATTCGATTTGTTGAGAAGATATGGGGCTACATCGAGGATGTGATGATATCTGTGTTAATGAAACATTCAGAAAATTATCTTCAGCTTCAGTTGTGTGCTAAAAGAGCTGGTCATAATTTGATCGCCAAGATGAAAGAAAGATCAGGTAAGTGGATGATGGAGATTGTAGAAATGGAGAAGCAAACTGATTATACATGTAATCCGGAGTATGTTACTGAATGGCAAAAGCTTATGAATAATCTGGGTGGATTTCTCCATGGAGTCCTGGGGGATGAGCATAAACCTCCTAGCTTTGTTGTGGACGATATTGGCATGGTTGAAGTTGAAGTTTTTAGGCAGTACCCGCGGGATCTTTTATCTGAAGCTTTTGACTTGAAAATGCGGATGATTGCATATTGGAAGGTCGTTCTGAGAAGGCTCGTTGATTCCATGGCATTGCATTTCCAGCTAAGTATTGCCAATCTTGTGAACAAGGACATGGAGATGAAGATTGTTACAGAATTAATGGGACCGAATAATGCAGGTGGAATTGAGAAGATGCTGGAAGAGTCTCCGGCAGTAGCATTGAAGCGTGAGAAGCTGAAAAAGAGCATCAACAAGCTTAAAGAATCCAAGGAGGTTGTGGGTAAGATTATGGATGGCATTATCACGTATGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

715

Amino Acids

79.57

Weight (kDa)

5.95

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	108 - 282	7.2e-41	Dynamin family
Dynamin_M	PF01031	289 - 573	1.7e-58	Dynamin central region
GED	PF02212	616 - 705	1.6e-10	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	428
AarI	CACCTGC	2 cut(s)	542, 1997
Acc36I	ACCTGC	2 cut(s)	542, 1997
AccB1I	GGYRCC	3 cut(s)	217, 418, 853
AccII	CGCG	2 cut(s)	377, 1831
AccIII	TCCGGA	2 cut(s)	613, 1687
AciI	CCGC	5 cut(s)	1287, 1429, 1829, 1831, 1867
AclWI	GGATC	5 cut(s)	301, 314, 639, 1213, 1842
AcsI	RAATTY	7 cut(s)	110, 1056, 1120, 1230, 1247, 1417, 1470
AcuI	CTGAAG	5 cut(s)	540, 1341, 1550, 1556, 1866
AcvI	CACGTG	1 cut(s)	395
AcyI	GRCGYC	1 cut(s)	81
AdeI	CACNNNGTG	1 cut(s)	800
AfaI	GTAC	2 cut(s)	1259, 1826
AfiI	CCNNNNNNNGG	1 cut(s)	662
AflIII	ACRYGT	1 cut(s)	1679
AgsI	TTSAA	9 cut(s)	116, 440, 450, 1061, 1301, 1805, 1811, 1861, 2053
AjnI	CCWGG	5 cut(s)	363, 413, 637, 1076, 1749
AleI	CACNNNNGTG	2 cut(s)	416, 1335
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	3 cut(s)	206, 330, 2040
AlwI	GGATC	5 cut(s)	301, 314, 639, 1213, 1842
Aor13HI	TCCGGA	2 cut(s)	613, 1687
AoxI	GGCC	1 cut(s)	507
ApoI	RAATTY	7 cut(s)	110, 1056, 1120, 1230, 1247, 1417, 1470
AseI	ATTAAT	1 cut(s)	1988
AspLEI	GCGC	1 cut(s)	498
AspS9I	GGNCC	2 cut(s)	1284, 1994
AsuHPI	GGTGA	3 cut(s)	637, 827, 896
AvaII	GGWCC	2 cut(s)	1284, 1994
BamHI	GGATCC	1 cut(s)	306
BanI	GGYRCC	3 cut(s)	217, 418, 853
BauI	CACGAG	2 cut(s)	150, 1331
BbrPI	CACGTG	1 cut(s)	395
BbsI	GAAGAC	3 cut(s)	94, 222, 1403
Bbv12I	GWGCWC	1 cut(s)	157
BbvCI	CCTCAGC	1 cut(s)	1173
BccI	CCATC	5 cut(s)	97, 283, 1334, 1636, 2117
BceAI	ACGGC	3 cut(s)	170, 251, 1200
BcgI	CGANNNNNNTGC	2 cut(s)	85, 119
BciT130I	CCWGG	5 cut(s)	365, 415, 639, 1078, 1751
BclI	TGATCA	1 cut(s)	702
BcoDI	GTCTC	3 cut(s)	206, 330, 2040
BfaI	CTAG	4 cut(s)	260, 357, 1290, 1773
BfuAI	ACCTGC	2 cut(s)	542, 1997
Bme1390I	CCNGG	5 cut(s)	365, 415, 639, 1078, 1751
Bme18I	GGWCC	2 cut(s)	1284, 1994
BmgT120I	GGNCC	2 cut(s)	1284, 1994
BmiI	GGNNCC	6 cut(s)	219, 308, 420, 855, 1285, 1995
BmrFI	CCNGG	5 cut(s)	365, 415, 639, 1078, 1751
BmsI	GCATC	5 cut(s)	253, 390, 1359, 2013, 2085
BpiI	GAAGAC	3 cut(s)	94, 222, 1403
Bpu10I	CCTNAGC	1 cut(s)	1173
BpuEI	CTTGAG	1 cut(s)	179
BsaAI	YACGTR	3 cut(s)	158, 395, 2136
BsaHI	GRCGYC	1 cut(s)	81
BsaI	GGTCTC	1 cut(s)	330
BsaJI	CCNNGG	9 cut(s)	414, 471, 637, 1017, 1741, 1750, 1829, 1914, 2097
BsaWI	WCCGGW	4 cut(s)	460, 613, 856, 1687
BsaXI	ACNNNNNCTCC	2 cut(s)	1017, 1047
Bsc4I	CCNNNNNNNGG	1 cut(s)	662
Bse1I	ACTGG	2 cut(s)	817, 1299
Bse3DI	GCAATG	1 cut(s)	1919
BseAI	TCCGGA	2 cut(s)	613, 1687
BseBI	CCWGG	5 cut(s)	365, 415, 639, 1078, 1751
BseDI	CCNNGG	9 cut(s)	414, 471, 637, 1017, 1741, 1750, 1829, 1914, 2097
BseGI	GGATG	7 cut(s)	795, 988, 1528, 1644, 1762, 1875, 2128
BseLI	CCNNNNNNNGG	1 cut(s)	662
BseMI	GCAATG	1 cut(s)	1919
BseMII	CTCAG	4 cut(s)	663, 1080, 1164, 1886
BseNI	ACTGG	2 cut(s)	817, 1299
BseRI	GAGGAG	2 cut(s)	965, 1257
BsgI	GTGCAG	2 cut(s)	394, 1313
Bsh1236I	CGCG	2 cut(s)	377, 1831
BshFI	GGCC	1 cut(s)	509
BshNI	GGYRCC	3 cut(s)	217, 418, 853
BsiHKAI	GWGCWC	1 cut(s)	157
BsiSI	CCGG	5 cut(s)	461, 614, 857, 1688, 2039
BslFI	GGGAC	4 cut(s)	237, 876, 1297, 2007
BslI	CCNNNNNNNGG	1 cut(s)	662
BsmAI	GTCTC	3 cut(s)	206, 330, 2040
BsmFI	GGGAC	4 cut(s)	237, 876, 1297, 2007
BsnI	GGCC	1 cut(s)	509
Bso31I	GGTCTC	1 cut(s)	330
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp13I	TCCGGA	2 cut(s)	613, 1687
Bsp143I	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
Bsp19I	CCATGG	3 cut(s)	1017, 1741, 1914
Bsp68I	TCGCGA	1 cut(s)	377
BspACI	CCGC	5 cut(s)	1287, 1429, 1829, 1831, 1867
BspANI	GGCC	1 cut(s)	509
BspCNI	CTCAG	4 cut(s)	664, 1081, 1165, 1887
BspEI	TCCGGA	2 cut(s)	613, 1687
BspFNI	CGCG	2 cut(s)	377, 1831
BspLI	GGNNCC	6 cut(s)	219, 308, 420, 855, 1285, 1995
BspMI	ACCTGC	2 cut(s)	542, 1997
BspPI	GGATC	5 cut(s)	301, 314, 639, 1213, 1842
BspT107I	GGYRCC	3 cut(s)	217, 418, 853
BspTNI	GGTCTC	1 cut(s)	330
BsrDI	GCAATG	1 cut(s)	1919
BsrI	ACTGG	2 cut(s)	817, 1299
BssECI	CCNNGG	9 cut(s)	414, 471, 637, 1017, 1741, 1750, 1829, 1914, 2097
BssMI	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
BssNI	GRCGYC	1 cut(s)	81
BssSI	CACGAG	2 cut(s)	150, 1331
BssT1I	CCWWGG	5 cut(s)	471, 1017, 1741, 1914, 2097
Bst2BI	CACGAG	2 cut(s)	150, 1331
Bst2UI	CCWGG	5 cut(s)	365, 415, 639, 1078, 1751
Bst4CI	ACNGT	2 cut(s)	100, 760
Bst6I	CTCTTC	2 cut(s)	1260, 2025
BstACI	GRCGYC	1 cut(s)	81
BstBAI	YACGTR	3 cut(s)	158, 395, 2136
BstC8I	GCNNGC	3 cut(s)	63, 379, 389
BstDEI	CTNAG	6 cut(s)	672, 1089, 1173, 1223, 1895, 1934
BstDSI	CCRYGG	4 cut(s)	1017, 1741, 1829, 1914
BstF5I	GGATG	7 cut(s)	795, 988, 1528, 1644, 1762, 1875, 2128
BstFNI	CGCG	2 cut(s)	377, 1831
BstHHI	GCGC	1 cut(s)	498
BstKTI	GATC	9 cut(s)	309, 634, 693, 705, 1095, 1208, 1608, 1628, 1837
BstMAI	GTCTC	3 cut(s)	206, 330, 2040
BstMBI	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 515, 1184, 1589, 1828, 1930, 2062
BstNI	CCWGG	5 cut(s)	365, 415, 639, 1078, 1751
BstNSI	RCATGY	3 cut(s)	65, 185, 1683
BstSCI	CCNGG	5 cut(s)	363, 413, 637, 1076, 1749
BstUI	CGCG	2 cut(s)	377, 1831
BstV2I	GAAGAC	3 cut(s)	94, 222, 1403
BstX2I	RGATCY	3 cut(s)	306, 631, 1834
BstXI	CCANNNNNNTGG	1 cut(s)	347
BstYI	RGATCY	3 cut(s)	306, 631, 1834
BsuRI	GGCC	1 cut(s)	509
BtgI	CCRYGG	4 cut(s)	1017, 1741, 1829, 1914
BtsCI	GGATG	7 cut(s)	795, 988, 1528, 1644, 1762, 1875, 2128
BtsI	GCAGTG	1 cut(s)	1438
BtsIMutI	CAGTG	2 cut(s)	498, 1438
BtuMI	TCGCGA	1 cut(s)	377
BveI	ACCTGC	2 cut(s)	542, 1997
Cac8I	GCNNGC	3 cut(s)	63, 379, 389
CfoI	GCGC	1 cut(s)	498
Cfr13I	GGNCC	2 cut(s)	1284, 1994
Cfr42I	CCGCGG	1 cut(s)	1832
CseI	GACGC	2 cut(s)	70, 349
Csp6I	GTAC	2 cut(s)	1258, 1825
CviQI	GTAC	2 cut(s)	1258, 1825
DdeI	CTNAG	6 cut(s)	672, 1089, 1173, 1223, 1895, 1934
DpnI	GATC	9 cut(s)	308, 633, 692, 704, 1094, 1207, 1607, 1627, 1836
DpnII	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
DraIII	CACNNNGTG	1 cut(s)	800
Eam1104I	CTCTTC	2 cut(s)	1260, 2025
EarI	CTCTTC	2 cut(s)	1260, 2025
Eco130I	CCWWGG	5 cut(s)	471, 1017, 1741, 1914, 2097
Eco31I	GGTCTC	1 cut(s)	330
Eco32I	GATATC	2 cut(s)	547, 1533
Eco47I	GGWCC	2 cut(s)	1284, 1994
Eco57I	CTGAAG	5 cut(s)	540, 1341, 1550, 1556, 1866
Eco72I	CACGTG	1 cut(s)	395
EcoRII	CCWGG	5 cut(s)	363, 413, 637, 1076, 1749
EcoRV	GATATC	2 cut(s)	547, 1533
EcoT14I	CCWWGG	5 cut(s)	471, 1017, 1741, 1914, 2097
ErhI	CCWWGG	5 cut(s)	471, 1017, 1741, 1914, 2097
FalI	AAGNNNNNCTT	2 cut(s)	1206, 1238
FaqI	GGGAC	4 cut(s)	237, 876, 1297, 2007
FauI	CCCGC	3 cut(s)	1436, 1824, 1836
FbaI	TGATCA	1 cut(s)	702
FokI	GGATG	7 cut(s)	802, 975, 1535, 1651, 1769, 1882, 2135
FspBI	CTAG	4 cut(s)	260, 357, 1290, 1773
GlaI	GCGC	1 cut(s)	497
HaeIII	GGCC	1 cut(s)	509
HapII	CCGG	5 cut(s)	461, 614, 857, 1688, 2039
HgaI	GACGC	2 cut(s)	70, 349
HhaI	GCGC	1 cut(s)	498
Hin1I	GRCGYC	1 cut(s)	81
Hin6I	GCGC	1 cut(s)	496
HinP1I	GCGC	1 cut(s)	496
HincII	GTYRAC	3 cut(s)	271, 847, 895
HindII	GTYRAC	3 cut(s)	271, 847, 895
HindIII	AAGCTT	3 cut(s)	1712, 1848, 2084
HpaII	CCGG	5 cut(s)	461, 614, 857, 1688, 2039
HphI	GGTGA	3 cut(s)	637, 827, 896
Hpy166II	GTNNAC	7 cut(s)	271, 398, 805, 847, 895, 1786, 1954
Hpy188III	TCNNGA	9 cut(s)	196, 348, 376, 614, 722, 922, 1096, 1366, 1688
Hpy8I	GTNNAC	7 cut(s)	271, 398, 805, 847, 895, 1786, 1954
Hpy99I	CGWCG	3 cut(s)	332, 335, 1213
HpyAV	CCTTC	4 cut(s)	296, 1459, 1879, 1893
HpyCH4III	ACNGT	2 cut(s)	100, 760
HpyCH4IV	ACGT	5 cut(s)	157, 207, 394, 1402, 2135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 515, 1184, 1589, 1828, 1930, 2062
HpyF3I	CTNAG	6 cut(s)	672, 1089, 1173, 1223, 1895, 1934
HpySE526I	ACGT	5 cut(s)	157, 207, 394, 1402, 2135
Hsp92I	GRCGYC	1 cut(s)	81
HspAI	GCGC	1 cut(s)	496
Kpn2I	TCCGGA	2 cut(s)	613, 1687
Ksp22I	TGATCA	1 cut(s)	702
KspI	CCGCGG	1 cut(s)	1832
Kzo9I	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
LmnI	GCTCC	5 cut(s)	282, 318, 463, 1080, 1135
LweI	GCATC	5 cut(s)	253, 390, 1359, 2013, 2085
MaeI	CTAG	4 cut(s)	260, 357, 1290, 1773
MaeII	ACGT	5 cut(s)	157, 207, 394, 1402, 2135
MaeIII	GTNAC	6 cut(s)	281, 792, 835, 877, 1696, 1978
MalI	GATC	9 cut(s)	308, 633, 692, 704, 1094, 1207, 1607, 1627, 1836
MboI	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
MflI	RGATCY	3 cut(s)	306, 631, 1834
MhlI	GDGCHC	1 cut(s)	157
MlyI	GAGTC	5 cut(s)	208, 817, 1417, 1755, 2042
MmeI	TCCRAC	2 cut(s)	313, 1003
MroI	TCCGGA	2 cut(s)	613, 1687
MseI	TTAA	8 cut(s)	531, 584, 620, 1308, 1541, 1988, 2088, 2146
MslI	CAYNNNNRTG	4 cut(s)	416, 1278, 1335, 1967
MspA1I	CMGCKG	1 cut(s)	1831
MspI	CCGG	5 cut(s)	461, 614, 857, 1688, 2039
MspR9I	CCNGG	5 cut(s)	365, 415, 639, 1078, 1751
MvaI	CCWGG	5 cut(s)	365, 415, 639, 1078, 1751
MvnI	CGCG	2 cut(s)	377, 1831
MwoI	GCNNNNNNNGC	7 cut(s)	152, 515, 1184, 1589, 1828, 1930, 2062
NcoI	CCATGG	3 cut(s)	1017, 1741, 1914
NdeII	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
NlaIV	GGNNCC	6 cut(s)	219, 308, 420, 855, 1285, 1995
NmuCI	GTSAC	1 cut(s)	792
NruI	TCGCGA	1 cut(s)	377
NspI	RCATGY	3 cut(s)	65, 185, 1683
OliI	CACNNNNGTG	2 cut(s)	416, 1335
PaeI	GCATGC	1 cut(s)	65
PaqCI	CACCTGC	2 cut(s)	542, 1997
PciI	ACATGT	1 cut(s)	1679
PfeI	GAWTC	7 cut(s)	122, 368, 642, 779, 1217, 1910, 2093
PfoI	TCCNGGA	1 cut(s)	363
PleI	GAGTC	5 cut(s)	207, 817, 1416, 1754, 2041
PmaCI	CACGTG	1 cut(s)	395
PmlI	CACGTG	1 cut(s)	395
PpsI	GAGTC	5 cut(s)	207, 817, 1416, 1754, 2041
Ppu21I	YACGTR	3 cut(s)	158, 395, 2136
PscI	ACATGT	1 cut(s)	1679
PshBI	ATTAAT	1 cut(s)	1988
PsiI	TTATAA	1 cut(s)	428
Psp6I	CCWGG	5 cut(s)	363, 413, 637, 1076, 1749
PspCI	CACGTG	1 cut(s)	395
PspGI	CCWGG	5 cut(s)	363, 413, 637, 1076, 1749
PspN4I	GGNNCC	6 cut(s)	219, 308, 420, 855, 1285, 1995
PspPI	GGNCC	2 cut(s)	1284, 1994
PsuI	RGATCY	3 cut(s)	306, 631, 1834
RruI	TCGCGA	1 cut(s)	377
RsaI	GTAC	2 cut(s)	1259, 1826
RsaNI	GTAC	2 cut(s)	1258, 1825
RseI	CAYNNNNRTG	4 cut(s)	416, 1278, 1335, 1967
SacII	CCGCGG	1 cut(s)	1832
SaqAI	TTAA	8 cut(s)	531, 584, 620, 1308, 1541, 1988, 2088, 2146
Sau3AI	GATC	9 cut(s)	306, 631, 690, 702, 1092, 1205, 1605, 1625, 1834
Sau96I	GGNCC	2 cut(s)	1284, 1994
SchI	GAGTC	5 cut(s)	208, 817, 1417, 1755, 2042
ScrFI	CCNGG	5 cut(s)	365, 415, 639, 1078, 1751
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	5 cut(s)	253, 390, 1359, 2013, 2085
Sfr303I	CCGCGG	1 cut(s)	1832
SgrBI	CCGCGG	1 cut(s)	1832
SinI	GGWCC	2 cut(s)	1284, 1994
SmiMI	CAYNNNNRTG	4 cut(s)	416, 1278, 1335, 1967
SmlI	CTYRAG	1 cut(s)	194
SmoI	CTYRAG	1 cut(s)	194
SphI	GCATGC	1 cut(s)	65
SsiI	CCGC	5 cut(s)	1287, 1429, 1829, 1831, 1867
SspMI	CTAG	4 cut(s)	260, 357, 1290, 1773
StyD4I	CCNGG	5 cut(s)	363, 413, 637, 1076, 1749
StyI	CCWWGG	5 cut(s)	471, 1017, 1741, 1914, 2097
TaaI	ACNGT	2 cut(s)	100, 760
TaiI	ACGT	5 cut(s)	160, 210, 397, 1405, 2138
TaqI	TCGA	5 cut(s)	762, 1211, 1475, 1489, 1518
TaqII	GACCGA	1 cut(s)	2011
TfiI	GAWTC	7 cut(s)	122, 368, 642, 779, 1217, 1910, 2093
Tru1I	TTAA	8 cut(s)	531, 584, 620, 1308, 1541, 1988, 2088, 2146
Tru9I	TTAA	8 cut(s)	531, 584, 620, 1308, 1541, 1988, 2088, 2146
TscAI	CASTG	2 cut(s)	505, 1438
TseFI	GTSAC	1 cut(s)	792
Tsp45I	GTSAC	1 cut(s)	792
TspDTI	ATGAA	9 cut(s)	177, 650, 1019, 1152, 1180, 1559, 1631, 1733, 1985
TspGWI	ACGGA	2 cut(s)	239, 269
TspRI	CASTG	2 cut(s)	505, 1438
VpaK11BI	GGWCC	2 cut(s)	1284, 1994
VspI	ATTAAT	1 cut(s)	1988
XapI	RAATTY	7 cut(s)	110, 1056, 1120, 1230, 1247, 1417, 1470
XceI	RCATGY	3 cut(s)	65, 185, 1683
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2104
XspI	CTAG	4 cut(s)	260, 357, 1290, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.