Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

4370706 .. 4374393

Gene Structure 3688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g05800.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGATCTTCCATTGTTCCTTGGTGGGGTGCTGTCTCTGCTCTGTTAATAGCTCTGGTGAGGTTTCAATGAAGGCCATAGAGAGGGAAAAGCTTTTGAAAGCTGGGGAAGTAAGCATGTCGGAGAAGCTTTCTTCCCATGGAGGTGAAGTTATACTGGAAGTTCAAAGCGAGGAGAGCAATGCAGCAAAAGGATCTCCCTCAAAAGGCTCAGAATATTCAGCTCCCAGGCAAAGCAAAATTGGCTCGCCCGCCAAAGCATCCGCTGAGTCCAGCAGTGGGTTCTCTAAGTCAGTCCCGGTGAGCCACGCTTCACCTGAATTTTCGAGAGCCAGTCCTGGCAAGCCTCCCAAGATTCCCACCCGCAATGAGAGTCTTGCTAGGAGAAAGTCACTAAATAGGTCAATGTACTCGAAACCAAAGTCAAGATTTGGTGAACCATCAGTAGGCATTGATCACAATATGTTTGAAGAAGATCAAGTTGGTGCAAATTCCCCTTATAGGGTTTCATTCAATAGGGCTTCCCCAATTGATAAATCAGGTATTAGGAGTGTTTCAATCGCAGGGAGTGGGAGGATACCGCCTTCTCCAGGCAGGATTAAAGAGCAGGAGGATGAAGAGATTTACAAGAAGGTTAAATTGAGTAGAGATAATAATAGGAAAGTGAAAATGAAAACTGTGGTCTTGCTTGAGTGGGTTGCTTTTCTGGTACTTCTGGCTTGTTTAGTGTCTAGCTTGACTATCGAGAAATTGGAGAATTATATGCTTTGGGGCCTGGAAATATGGAAATGGTGTGTTCTTGTGATGGTGATTTTCTGTGGAATGTTGGTTACGAATTGGTTTATGCATTTCATAGTGTTTGTGATCGAGAGGAATTTTTTGCTGAGGAAAAAGGTTTTGTATTTTGTTCATGGCATGAAAAAGAGCGTTCAGGTTTCGATTTGGTTGGCTCTGGTTCTTCTCACATGGCTACTGGTGTTCAATCGTGGGGTCGATCGATCAGAGACTTCCACCAAGATTTTGAATTATGTCACATGGACTCTTGTTTCCATTCTTGTTGGGGCTATTTTGTGGTTGTTAAAAACTTTGTTCCTTAAGATTTTAGCATCTACTTTCCATGTCAATACCTTTTTCGATAGAATCCAAGAATCAATATTCCATCAGTACGTTCTGCAGACACTTTCAGGGCCGGCACTTATAGAGGAGGCTGAGAGGGTTGGGAAATGTCCGAGCACTGGGCAACTGAGTTTCAGGACAACAAAGAAGGCTAAGGCTGGGAAGGAGAAGGGGGTGATTGATATGGCAAAGCTTCAGAAGATGAAGCAAGAGAAGGTTTCAGCTTGGACCATGAAGGTATTGGTGGATGCAGTTTCGAGTTCAGGGCTGTCCACCATCTCCCATACATTGGATGAGATGGAAGGGGAAGGAGCTGAACAGATGGATACGGAGATTACTAATGAGATGCAAGCAACTGCCGCTGCCTATCACATTTTTTTGAACGTCGCACCACAGGGTTCCACATACATTGAGGAGGAGGACCTCATGAGGTTCATGATTAAGGAAGAGGTGGATTATGTGTTTCCGCTGTTTGATGGAGCAGAGACTAGACGTATTGACAGAAAATCTCTAACAGATTGGGTGGTGAAGGTCTACAATGGTCGCAAGGCATTGGCTCATTCTTTAAACGACACCAAAACAGCTGTAAGGCAGTTGAACAAACTTGTGACTGGCATCCTGGTTGTCATTACCATTGTAGTGTGGCTTCTATTGATGGAAATTGCGACCACAAAAGTACTTGTCCTCCTCTCGTCACAGCTCGTAGTTGCAGCTTTTATGTTTGGAAACACTTGCAAGAATATATTTGAAGCTATAATTTTTGTGTTTGTAATGCATCCATTCGATGTTGGTGACCGCTGTGTTGTTGATGGTGTTCCGTTGATGGTTGAGGAGATGAACATCTTAAGTACAGTCTTCTTGAAACTCAATATGGAGAAGGTATACTATCCGAATTCAGTTTTGTCCACGAAACCCATCAGCAATTACTTCAGAAGTCCAGACATGGGTGACGTTGTCGAATTCCAAATTGCTTTTTCGACAACAGTGGAGAGGATAGGCCTGCTGAAAGAGAAAATAAAGGAGCATTTGGAGAGGAACTCGCAGCATTGGCATCCTTACCACAGAGTGGTAGTGATTGAAATCGAAAATGTCAACAAGTTAAAGATGGCCCTGTATGTCACTCACACGATGAACTTTCAAGAGTTTGGAGAAAAGAATAAGCGGAGAACTGAACTAGTCATCGAACTGAAGAAAATGTTGGAAGAGCTCCAAATCAAGTACAACCTGCCGCCCCAAGAAGTTCATCTCACTCAAACTAAATCAGACGCAGCTTTTGCCAACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

800

Amino Acids

90.19

Weight (kDa)

9.02

Isoelectric Point (pI)

45.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2346
AccB7I	CCANNNNNTGG	2 cut(s)	1402, 2179
AccI	GTMKAC	2 cut(s)	1647, 1995
AciI	CCGC	9 cut(s)	249, 261, 361, 578, 1473, 1580, 1909, 2275, 2342
AclWI	GGATC	1 cut(s)	199
AcsI	RAATTY	5 cut(s)	317, 487, 871, 2005, 2072
AcuI	CTGAAG	3 cut(s)	1292, 2026, 2321
AdeI	CACNNNGTG	1 cut(s)	2179
AfaI	GTAC	6 cut(s)	407, 708, 1163, 1791, 1963, 2333
AflII	CTTAAG	2 cut(s)	1091, 1957
AhlI	ACTAGT	1 cut(s)	2287
AjnI	CCWGG	5 cut(s)	224, 334, 586, 771, 1731
AjuI	GAANNNNNNNTTGG	4 cut(s)	462, 494, 2294, 2326
Alw21I	GWGCWC	2 cut(s)	1232, 2322
Alw26I	GTCTC	3 cut(s)	38, 995, 1592
AlwI	GGATC	1 cut(s)	199
AoxI	GGCC	5 cut(s)	72, 769, 1184, 2110, 2220
ApeKI	GCWGC	5 cut(s)	182, 1475, 1823, 2155, 2381
ApoI	RAATTY	5 cut(s)	317, 487, 871, 2005, 2072
ArsI	GACNNNNNNTTYG	3 cut(s)	404, 436, 2369
AspS9I	GGNCC	5 cut(s)	769, 1184, 1341, 1534, 2221
AsuC2I	CCSGG	1 cut(s)	296
AvaII	GGWCC	2 cut(s)	1341, 1534
BanII	GRGCYC	1 cut(s)	2322
BarI	GAAGNNNNNNTAC	2 cut(s)	1743, 1775
BbsI	GAAGAC	1 cut(s)	1960
Bbv12I	GWGCWC	2 cut(s)	1232, 2322
BbvCI	CCTCAGC	1 cut(s)	881
BbvI	GCAGC	5 cut(s)	194, 1462, 1835, 2167, 2393
BciT130I	CCWGG	5 cut(s)	226, 336, 588, 773, 1733
BciVI	GTATCC	2 cut(s)	567, 1432
BclI	TGATCA	1 cut(s)	451
BcnI	CCSGG	1 cut(s)	296
BcoDI	GTCTC	3 cut(s)	38, 995, 1592
BcuI	ACTAGT	1 cut(s)	2287
BfaI	CTAG	4 cut(s)	378, 729, 1602, 2288
BfmI	CTRYAG	1 cut(s)	1169
BfrI	CTTAAG	2 cut(s)	1091, 1957
BfuAI	ACCTGC	1 cut(s)	2346
BfuI	GTATCC	2 cut(s)	567, 1432
BisI	GCNGC	7 cut(s)	183, 1473, 1476, 1824, 2156, 2342, 2382
BlsI	GCNGC	7 cut(s)	184, 1474, 1477, 1825, 2157, 2343, 2383
BmcAI	AGTACT	1 cut(s)	1791
Bme1390I	CCNGG	6 cut(s)	226, 296, 336, 588, 773, 1733
Bme18I	GGWCC	2 cut(s)	1341, 1534
BmgT120I	GGNCC	5 cut(s)	769, 1184, 1341, 1534, 2221
BmiI	GGNNCC	2 cut(s)	770, 1513
BmrFI	CCNGG	6 cut(s)	226, 296, 336, 588, 773, 1733
BmrI	ACTGGG	1 cut(s)	1242
BmsI	GCATC	7 cut(s)	266, 1112, 1351, 1449, 1737, 1897, 2173
BmuI	ACTGGG	1 cut(s)	1242
BpiI	GAAGAC	1 cut(s)	1960
BplI	GAGNNNNNCTC	2 cut(s)	2135, 2167
BpmI	CTGGAG	1 cut(s)	570
Bpu10I	CCTNAGC	2 cut(s)	881, 1266
BpuEI	CTTGAG	1 cut(s)	707
BpuMI	CCSGG	1 cut(s)	296
Bsa29I	ATCGAT	1 cut(s)	994
BsaBI	GATNNNNATC	2 cut(s)	1952, 2192
BsaJI	CCNNGG	3 cut(s)	18, 136, 224
BsaXI	ACNNNNNCTCC	4 cut(s)	132, 162, 1782, 1812
Bse118I	RCCGGY	1 cut(s)	1186
Bse1I	ACTGG	5 cut(s)	159, 330, 975, 1237, 1729
Bse3DI	GCAATG	2 cut(s)	184, 370
Bse8I	GATNNNNATC	2 cut(s)	1952, 2192
BseBI	CCWGG	5 cut(s)	226, 336, 588, 773, 1733
BseCI	ATCGAT	1 cut(s)	994
BseDI	CCNNGG	3 cut(s)	18, 136, 224
BseGI	GGATG	7 cut(s)	257, 616, 1366, 1411, 1728, 1888, 2164
BseJI	GATNNNNATC	2 cut(s)	1952, 2192
BseMI	GCAATG	2 cut(s)	184, 370
BseMII	CTCAG	5 cut(s)	222, 255, 872, 1197, 1232
BseNI	ACTGG	5 cut(s)	159, 330, 975, 1237, 1729
BseRI	GAGGAG	6 cut(s)	185, 1214, 1541, 1544, 1790, 1958
BseXI	GCAGC	5 cut(s)	194, 1462, 1835, 2167, 2393
BseYI	CCCAGC	2 cut(s)	101, 1271
Bsh1285I	CGRYCG	1 cut(s)	994
BshFI	GGCC	5 cut(s)	74, 771, 1186, 2112, 2222
BshVI	ATCGAT	1 cut(s)	994
BsiEI	CGRYCG	1 cut(s)	994
BsiHKAI	GWGCWC	2 cut(s)	1232, 2322
BsiSI	CCGG	2 cut(s)	296, 1187
BslFI	GGGAC	1 cut(s)	278
BsmAI	GTCTC	3 cut(s)	38, 995, 1592
BsmFI	GGGAC	1 cut(s)	278
BsnI	GGCC	5 cut(s)	74, 771, 1186, 2112, 2222
Bsp1286I	GDGCHC	2 cut(s)	1232, 2322
Bsp143I	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
Bsp19I	CCATGG	1 cut(s)	136
BspACI	CCGC	9 cut(s)	249, 261, 361, 578, 1473, 1580, 1909, 2275, 2342
BspANI	GGCC	5 cut(s)	74, 771, 1186, 2112, 2222
BspCNI	CTCAG	5 cut(s)	221, 256, 873, 1198, 1233
BspDI	ATCGAT	1 cut(s)	994
BspHI	TCATGA	2 cut(s)	1539, 1548
BspLI	GGNNCC	2 cut(s)	770, 1513
BspMAI	CTGCAG	1 cut(s)	1173
BspMI	ACCTGC	1 cut(s)	2346
BspPI	GGATC	1 cut(s)	199
BspQI	GCTCTTC	1 cut(s)	2310
BspTI	CTTAAG	2 cut(s)	1091, 1957
BsrDI	GCAATG	2 cut(s)	184, 370
BsrFI	RCCGGY	1 cut(s)	1186
BsrI	ACTGG	5 cut(s)	159, 330, 975, 1237, 1729
BssAI	RCCGGY	1 cut(s)	1186
BssECI	CCNNGG	3 cut(s)	18, 136, 224
BssMI	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
BssNAI	GTATAC	1 cut(s)	1996
BssT1I	CCWWGG	2 cut(s)	18, 136
Bst1107I	GTATAC	1 cut(s)	1996
Bst2UI	CCWGG	5 cut(s)	226, 336, 588, 773, 1733
Bst4CI	ACNGT	3 cut(s)	676, 1966, 2098
Bst6I	CTCTTC	3 cut(s)	609, 1554, 2310
BstAFI	CTTAAG	2 cut(s)	1091, 1957
BstAPI	GCANNNNNTGC	1 cut(s)	2387
BstC8I	GCNNGC	6 cut(s)	245, 249, 341, 1188, 1464, 2114
BstDEI	CTNAG	7 cut(s)	208, 264, 285, 881, 1206, 1241, 1266
BstDSI	CCRYGG	1 cut(s)	136
BstEII	GGTNACC	1 cut(s)	1904
BstENI	CCTNNNNNAGG	1 cut(s)	585
BstF5I	GGATG	7 cut(s)	257, 616, 1366, 1411, 1728, 1888, 2164
BstKTI	GATC	7 cut(s)	6, 194, 454, 475, 864, 994, 998
BstMAI	GTCTC	3 cut(s)	38, 995, 1592
BstMBI	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
BstMCI	CGRYCG	1 cut(s)	994
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 174, 240, 1472, 2161, 2387
BstNI	CCWGG	5 cut(s)	226, 336, 588, 773, 1733
BstNSI	RCATGY	1 cut(s)	118
BstPI	GGTNACC	1 cut(s)	1904
BstSCI	CCNGG	6 cut(s)	224, 294, 334, 586, 771, 1731
BstSFI	CTRYAG	1 cut(s)	1169
BstV1I	GCAGC	5 cut(s)	194, 1462, 1835, 2167, 2393
BstV2I	GAAGAC	1 cut(s)	1960
BstX2I	RGATCY	1 cut(s)	191
BstYI	RGATCY	1 cut(s)	191
BstZ17I	GTATAC	1 cut(s)	1996
Bsu15I	ATCGAT	1 cut(s)	994
BsuI	GTATCC	2 cut(s)	567, 1432
BsuRI	GGCC	5 cut(s)	74, 771, 1186, 2112, 2222
BsuTUI	ATCGAT	1 cut(s)	994
BtgI	CCRYGG	1 cut(s)	136
BtsCI	GGATG	7 cut(s)	257, 616, 1366, 1411, 1728, 1888, 2164
BtsI	GCAGTG	1 cut(s)	280
BtsIMutI	CAGTG	3 cut(s)	280, 1230, 2103
BveI	ACCTGC	1 cut(s)	2346
Cac8I	GCNNGC	6 cut(s)	245, 249, 341, 1188, 1464, 2114
CciI	TCATGA	2 cut(s)	1539, 1548
Cfr10I	RCCGGY	1 cut(s)	1186
Cfr13I	GGNCC	5 cut(s)	769, 1184, 1341, 1534, 2221
ClaI	ATCGAT	1 cut(s)	994
CseI	GACGC	1 cut(s)	2387
Csp6I	GTAC	6 cut(s)	406, 707, 1162, 1790, 1962, 2332
CspCI	CAANNNNNGTGG	2 cut(s)	1504, 1539
CviQI	GTAC	6 cut(s)	406, 707, 1162, 1790, 1962, 2332
DdeI	CTNAG	7 cut(s)	208, 264, 285, 881, 1206, 1241, 1266
DpnI	GATC	7 cut(s)	5, 193, 453, 474, 863, 993, 997
DpnII	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
DraI	TTTAAA	1 cut(s)	1680
DraIII	CACNNNGTG	1 cut(s)	2179
Eam1104I	CTCTTC	3 cut(s)	609, 1554, 2310
EarI	CTCTTC	3 cut(s)	609, 1554, 2310
Ecl136II	GAGCTC	1 cut(s)	2320
Eco130I	CCWWGG	2 cut(s)	18, 136
Eco147I	AGGCCT	1 cut(s)	2112
Eco24I	GRGCYC	1 cut(s)	2322
Eco47I	GGWCC	2 cut(s)	1341, 1534
Eco53kI	GAGCTC	1 cut(s)	2320
Eco57I	CTGAAG	3 cut(s)	1292, 2026, 2321
Eco91I	GGTNACC	1 cut(s)	1904
EcoICRI	GAGCTC	1 cut(s)	2320
EcoNI	CCTNNNNNAGG	1 cut(s)	585
EcoO109I	RGGNCCY	2 cut(s)	769, 1534
EcoO65I	GGTNACC	1 cut(s)	1904
EcoRI	GAATTC	2 cut(s)	2005, 2072
EcoRII	CCWGG	5 cut(s)	224, 334, 586, 771, 1731
EcoT14I	CCWWGG	2 cut(s)	18, 136
EcoT22I	ATGCAT	2 cut(s)	846, 1890
EcoT38I	GRGCYC	1 cut(s)	2322
ErhI	CCWWGG	2 cut(s)	18, 136
FaqI	GGGAC	1 cut(s)	278
FauI	CCCGC	2 cut(s)	256, 368
FbaI	TGATCA	1 cut(s)	451
FblI	GTMKAC	2 cut(s)	1647, 1995
Fnu4HI	GCNGC	7 cut(s)	183, 1473, 1476, 1824, 2156, 2342, 2382
FokI	GGATG	7 cut(s)	244, 623, 1373, 1418, 1715, 1875, 2151
FriOI	GRGCYC	1 cut(s)	2322
Fsp4HI	GCNGC	7 cut(s)	183, 1473, 1476, 1824, 2156, 2342, 2382
FspBI	CTAG	4 cut(s)	378, 729, 1602, 2288
GluI	GCNGC	7 cut(s)	183, 1473, 1476, 1824, 2156, 2342, 2382
GsaI	CCCAGC	2 cut(s)	105, 1275
GsuI	CTGGAG	1 cut(s)	570
HaeIII	GGCC	5 cut(s)	74, 771, 1186, 2112, 2222
HapII	CCGG	2 cut(s)	296, 1187
HgaI	GACGC	1 cut(s)	2387
HincII	GTYRAC	1 cut(s)	2206
HindII	GTYRAC	1 cut(s)	2206
HindIII	AAGCTT	3 cut(s)	89, 125, 1304
HinfI	GANTC	6 cut(s)	266, 352, 370, 1036, 1137, 1145
HpaII	CCGG	2 cut(s)	296, 1187
Hpy166II	GTNNAC	6 cut(s)	434, 1386, 1648, 1996, 2019, 2206
Hpy188I	TCNGA	8 cut(s)	121, 211, 1000, 1227, 1311, 2004, 2045, 2377
Hpy8I	GTNNAC	6 cut(s)	434, 1386, 1648, 1996, 2019, 2206
Hpy99I	CGWCG	1 cut(s)	1502
HpyCH4III	ACNGT	3 cut(s)	676, 1966, 2098
HpyCH4IV	ACGT	4 cut(s)	1164, 1497, 1606, 2064
HpyCH4V	TGCA	9 cut(s)	182, 485, 844, 1171, 1364, 1462, 1823, 1848, 1888
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 174, 240, 1472, 2161, 2387
HpyF3I	CTNAG	7 cut(s)	208, 264, 285, 881, 1206, 1241, 1266
HpySE526I	ACGT	4 cut(s)	1164, 1497, 1606, 2064
KroI	GCCGGC	1 cut(s)	1186
KroNI	GCCGGC	1 cut(s)	1188
Ksp22I	TGATCA	1 cut(s)	451
Kzo9I	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
LguI	GCTCTTC	1 cut(s)	2310
LmnI	GCTCC	5 cut(s)	226, 1424, 1592, 2134, 2325
Lsp1109I	GCAGC	5 cut(s)	194, 1462, 1835, 2167, 2393
LweI	GCATC	7 cut(s)	266, 1112, 1351, 1449, 1737, 1897, 2173
MaeI	CTAG	4 cut(s)	378, 729, 1602, 2288
MaeII	ACGT	4 cut(s)	1164, 1497, 1606, 2064
MaeIII	GTNAC	8 cut(s)	387, 826, 1027, 1720, 1806, 1904, 2060, 2230
MalI	GATC	7 cut(s)	5, 193, 453, 474, 863, 993, 997
MboI	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	1 cut(s)	191
MhlI	GDGCHC	2 cut(s)	1232, 2322
MlyI	GAGTC	3 cut(s)	275, 379, 1030
MmeI	TCCRAC	2 cut(s)	99, 2292
Mph1103I	ATGCAT	2 cut(s)	846, 1890
MroNI	GCCGGC	1 cut(s)	1186
MseI	TTAA	9 cut(s)	45, 597, 633, 1076, 1092, 1554, 1679, 1958, 2213
MslI	CAYNNNNRTG	2 cut(s)	141, 1751
MspA1I	CMGCKG	5 cut(s)	263, 1475, 1582, 1697, 1911
MspCI	CTTAAG	2 cut(s)	1091, 1957
MspI	CCGG	2 cut(s)	296, 1187
MspR9I	CCNGG	6 cut(s)	226, 296, 336, 588, 773, 1733
MunI	CAATTG	1 cut(s)	525
MvaI	CCWGG	5 cut(s)	226, 336, 588, 773, 1733
MwoI	GCNNNNNNNGC	6 cut(s)	36, 174, 240, 1472, 2161, 2387
NaeI	GCCGGC	1 cut(s)	1188
NciI	CCSGG	1 cut(s)	296
NcoI	CCATGG	1 cut(s)	136
NdeII	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
NgoMIV	GCCGGC	1 cut(s)	1186
NlaIV	GGNNCC	2 cut(s)	770, 1513
NmuCI	GTSAC	7 cut(s)	387, 1027, 1720, 1806, 1904, 2060, 2230
NsiI	ATGCAT	2 cut(s)	846, 1890
NspI	RCATGY	1 cut(s)	118
PagI	TCATGA	2 cut(s)	1539, 1548
PceI	AGGCCT	1 cut(s)	2112
PciSI	GCTCTTC	1 cut(s)	2310
PdiI	GCCGGC	1 cut(s)	1188
PfeI	GAWTC	3 cut(s)	352, 1137, 1145
PflFI	GACNNNGTC	1 cut(s)	2066
PflMI	CCANNNNNTGG	2 cut(s)	1402, 2179
PkrI	GCNGC	7 cut(s)	184, 1474, 1477, 1825, 2157, 2343, 2383
Ple19I	CGATCG	1 cut(s)	994
PleI	GAGTC	3 cut(s)	274, 378, 1030
PpsI	GAGTC	3 cut(s)	274, 378, 1030
PpuMI	RGGWCCY	1 cut(s)	1534
Psp124BI	GAGCTC	1 cut(s)	2322
Psp5II	RGGWCCY	1 cut(s)	1534
Psp6I	CCWGG	5 cut(s)	224, 334, 586, 771, 1731
PspEI	GGTNACC	1 cut(s)	1904
PspFI	CCCAGC	2 cut(s)	101, 1271
PspGI	CCWGG	5 cut(s)	224, 334, 586, 771, 1731
PspN4I	GGNNCC	2 cut(s)	770, 1513
PspPI	GGNCC	5 cut(s)	769, 1184, 1341, 1534, 2221
PspPPI	RGGWCCY	1 cut(s)	1534
PstI	CTGCAG	1 cut(s)	1173
PsuI	RGATCY	1 cut(s)	191
PsyI	GACNNNGTC	1 cut(s)	2066
PvuI	CGATCG	1 cut(s)	994
PvuII	CAGCTG	1 cut(s)	1697
RsaI	GTAC	6 cut(s)	407, 708, 1163, 1791, 1963, 2333
RsaNI	GTAC	6 cut(s)	406, 707, 1162, 1790, 1962, 2332
RseI	CAYNNNNRTG	2 cut(s)	141, 1751
SacI	GAGCTC	1 cut(s)	2322
SapI	GCTCTTC	1 cut(s)	2310
SaqAI	TTAA	9 cut(s)	45, 597, 633, 1076, 1092, 1554, 1679, 1958, 2213
SatI	GCNGC	7 cut(s)	183, 1473, 1476, 1824, 2156, 2342, 2382
Sau3AI	GATC	7 cut(s)	3, 191, 451, 472, 861, 991, 995
Sau96I	GGNCC	5 cut(s)	769, 1184, 1341, 1534, 2221
ScaI	AGTACT	1 cut(s)	1791
SchI	GAGTC	3 cut(s)	275, 379, 1030
ScrFI	CCNGG	6 cut(s)	226, 296, 336, 588, 773, 1733
SduI	GDGCHC	2 cut(s)	1232, 2322
SfaNI	GCATC	7 cut(s)	266, 1112, 1351, 1449, 1737, 1897, 2173
SfcI	CTRYAG	1 cut(s)	1169
SinI	GGWCC	2 cut(s)	1341, 1534
SmiMI	CAYNNNNRTG	2 cut(s)	141, 1751
SmlI	CTYRAG	3 cut(s)	686, 1091, 1957
SmoI	CTYRAG	3 cut(s)	686, 1091, 1957
SpeI	ACTAGT	1 cut(s)	2287
SseBI	AGGCCT	1 cut(s)	2112
SsiI	CCGC	9 cut(s)	249, 261, 361, 578, 1473, 1580, 1909, 2275, 2342
SspI	AATATT	2 cut(s)	215, 1152
SspMI	CTAG	4 cut(s)	378, 729, 1602, 2288
SstI	GAGCTC	1 cut(s)	2322
StuI	AGGCCT	1 cut(s)	2112
StyD4I	CCNGG	6 cut(s)	224, 294, 334, 586, 771, 1731
StyI	CCWWGG	2 cut(s)	18, 136
TaaI	ACNGT	3 cut(s)	676, 1966, 2098
TaiI	ACGT	4 cut(s)	1167, 1500, 1609, 2067
TatI	WGTACW	4 cut(s)	405, 1789, 1961, 2331
TauI	GCSGC	2 cut(s)	1475, 2344
TfiI	GAWTC	3 cut(s)	352, 1137, 1145
Tru1I	TTAA	9 cut(s)	45, 597, 633, 1076, 1092, 1554, 1679, 1958, 2213
Tru9I	TTAA	9 cut(s)	45, 597, 633, 1076, 1092, 1554, 1679, 1958, 2213
TscAI	CASTG	3 cut(s)	280, 1237, 2103
TseFI	GTSAC	7 cut(s)	387, 1027, 1720, 1806, 1904, 2060, 2230
TseI	GCWGC	5 cut(s)	182, 1475, 1823, 2155, 2381
Tsp45I	GTSAC	7 cut(s)	387, 1027, 1720, 1806, 1904, 2060, 2230
TspGWI	ACGGA	2 cut(s)	1457, 1920
TspRI	CASTG	3 cut(s)	280, 1237, 2103
Tth111I	GACNNNGTC	1 cut(s)	2066
Van91I	CCANNNNNTGG	2 cut(s)	1402, 2179
Vha464I	CTTAAG	2 cut(s)	1091, 1957
VpaK11BI	GGWCC	2 cut(s)	1341, 1534
XagI	CCTNNNNNAGG	1 cut(s)	585
XapI	RAATTY	5 cut(s)	317, 487, 871, 2005, 2072
XceI	RCATGY	1 cut(s)	118
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1351
XmiI	GTMKAC	2 cut(s)	1647, 1995
XspI	CTAG	4 cut(s)	378, 729, 1602, 2288
ZrmI	AGTACT	1 cut(s)	1791
Zsp2I	ATGCAT	2 cut(s)	846, 1890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.