Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

67719498 .. 67722301

Gene Structure 2804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG504800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGAAGCCGCAGAGAAAGGCTTAAAAGGAAGCAATGTAAGCATGTCGAAAAATCGATCTGGGAATGATGGAGGTGATGAAGTTGTAGTGGTGGTTCAAAGCGAAGAGATGGAAGATGAAGCAAAAGGGTCTTGTTCGAAAGGCTTAGAATCTTCAGCTCCCAATCAAATTAGCAAAGTGGAATTGCAGGTTGGCTCTCATTCCCCTGAGATTACAGGATCCAGCAACGCCCCCATCCCCAATGAGACCCTCACTAGGAGAAAGTCATCTATTAGTCTTGGTCAACAGTCGATGCGCATTGATTCTGATATTCTTGAAGAGGACACTAATTTAGAGCAGGATGGTTCCCCCGCAAATAAATCAGCATTCAAAGAGGAGGAGGAGGAGGAGGAGGAGATTTACGAGAAGGTTAACTCTAGCAGGAAAGTGAACAAGAAAATGCTGATGGAGTATATTGTTTTCGCGTGCAGTTTGGGTGTTATAGTAGCTAGCTTTACTGTCGAGAAACTAGAGAATCTTAAGGTGTGGGGATTGGAGATGTGGAAATTGTGTGTGCTTGTTATGCTCATATTCTGTGGAATGCTGGTTACGAATTGTGTTTTGACTCTGTTAGTTTTTGTGATTGAGAGGAACTTTCTGTTTACGAGGAAGAAGGTGGTGTTGTATTTGGTTTATGGAATGAAAAAGAGTGTTCAGGTTTTCCTGTGGTTCGGTATGGTGCTTCTCACATGGCTATTCTTTTTCAAATTCAATCGTGGCAATGAGAGATCAAAGACTTCCACCAAGATTTTGGATCATATTACGTGGACTCTTGTTTCGCTGCTTATTGGTGCCTTTTTGTGGATGTTATCAACTTTGTTGTTTAAGACCCTAGCATCTAAATTCATGGCCGTCGCCTATTTTGATAGGATTCAAGAATCTTTGTTCCATCAGTACGTTATTGAGACACTTTCGGGGCCTCCGTTAGTAGAGGAGGATGCCAAGATTAGGAGATCACTCAGCACAGGGTTTGTGAGTCTCAGGTCGATAAACAATGTGGAAAAGAAGGTCACTGGTAAGGTGAATCCTGCAAGGAAGGTTTCAGTTGAGACCATGGATACGTTGGTGGGTGCAGTTTCTACTAGAGATACAGAGATTACAAGTGAGTGGGAAGCCAAAGCTGCTGCCTTCAAAATATTTCGAAACGTTGCTCAGCATGGTAACAAGTACATCGAGGAGGAGGACCTCATGAGGTTCATGACTCGGGCAGAGGTGGGTAATGTATTTCCACTGTTTGACGGAGCAATGGAAAACGGCAAAATTAAAAGAAAAGATCTACGTAGCTGGATGGTAAATGTCTACCGAGAACGCAACGCATTAGCTTGTTCTATGACTGACACCAAAACAGTTCTAAAGCAATTTGAGAAATTTTTTACTAGCTTGGTGATTGTTATTACCATCGTAGTGTGGCTACTGTTGGTGGGAATTGCAAGTACAAACCTAGTTGTTTTCCTCTCAACACAGTTCTTATTGGCAGCTTTTATTTTTGGAAACACTTGCAAGAATGTATTTGAAGCTATCGTGTTCATGTTTGTGACACATCCATTTGATGTTGGTGATCGCATTGTTGTTGATGATGTTCTGTTGGTCGTTGAAGAGATGAACGTCTTAACTACCACCTTCTTGAAACCAAATAATGAAAAGGTGTACTATCCAAATTCAGTTTTGTGCACCAAAATCATCAGCAATTATTACAGAAGTCCAGAAATGGGAGATACAGTGGAATTCTCAATTATTTTGACACCAGTGGAGAAGATAGACATGTTGAGAAAGAGAATAAAGGAGTACTTGGAGAGCAAACCGCAGCATTGGCGTCCAGGCCACAGTGTGGTGGTGATTGATATCGAAGATGTGAATAAGTTAAAGATGGCACTCAATATTTGTCACACTATGAACTTTCAAGAAATTGGTGAAAGGAATAAACGGCGAACTGAGCTAGTCATCGAATTGATGAGAACTTTGGAAGACCTAAACATCACATACAGTCTGATGCCCCAAGAAGTTCACCTCACTCAAAATAAAGCAGATGCAACCGTTTCCTTCAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

696

Amino Acids

79.24

Weight (kDa)

6.41

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Msy1	PF25886	151 - 295	4.7e-06	Mechanosensitive ion channel protein Msy1-like, transmembrane domain
MS_channel_2nd	PF00924	514 - 578	1.5e-10	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	178
AccB1I	GGYRCC	1 cut(s)	830
AccB7I	CCANNNNNTGG	1 cut(s)	1867
AccI	GTMKAC	1 cut(s)	1338
AccII	CGCG	1 cut(s)	464
AciI	CCGC	3 cut(s)	9, 351, 1841
AclI	AACGTT	1 cut(s)	1185
AclWI	GGATC	3 cut(s)	213, 226, 801
AcoI	YGGCCR	1 cut(s)	888
AcsI	RAATTY	5 cut(s)	746, 881, 1406, 1696, 1763
AcuI	CTGAAG	1 cut(s)	138
AcyI	GRCGYC	1 cut(s)	1852
AdeI	CACNNNGTG	1 cut(s)	1867
AfaI	GTAC	5 cut(s)	935, 1208, 1474, 1688, 1826
AfiI	CCNNNNNNNGG	5 cut(s)	255, 840, 987, 1748, 1867
AflII	CTTAAG	1 cut(s)	518
AflIII	ACRYGT	1 cut(s)	1800
AjnI	CCWGG	1 cut(s)	1855
AjuI	GAANNNNNNNTTGG	2 cut(s)	174, 206
Alw21I	GWGCWC	1 cut(s)	1712
Alw26I	GTCTC	4 cut(s)	239, 938, 1022, 1082
Alw44I	GTGCAC	1 cut(s)	1708
AlwI	GGATC	3 cut(s)	213, 226, 801
Ama87I	CYCGRG	1 cut(s)	1242
AoxI	GGCC	3 cut(s)	888, 956, 1858
ApaLI	GTGCAC	1 cut(s)	1708
ApeKI	GCWGC	5 cut(s)	820, 1160, 1163, 1514, 1843
ApoI	RAATTY	5 cut(s)	746, 881, 1406, 1696, 1763
ArsI	GACNNNNNNTTYG	2 cut(s)	799, 831
AspLEI	GCGC	1 cut(s)	297
AspS9I	GGNCC	2 cut(s)	956, 1222
AsuHPI	GGTGA	7 cut(s)	86, 1072, 1435, 1607, 1885, 1961, 2036
AsuII	TTCGAA	2 cut(s)	137, 1180
AsuNHI	GCTAGC	1 cut(s)	488
AvaI	CYCGRG	1 cut(s)	1242
AvaII	GGWCC	1 cut(s)	1222
BaeGI	GKGCMC	1 cut(s)	1712
BaeI	ACNNNNGTAYC	2 cut(s)	1089, 1122
BamHI	GGATCC	1 cut(s)	218
BanI	GGYRCC	1 cut(s)	830
BbsI	GAAGAC	1 cut(s)	2010
Bbv12I	GWGCWC	1 cut(s)	1712
BbvI	GCAGC	5 cut(s)	807, 1147, 1150, 1526, 1855
BccI	CCATC	9 cut(s)	62, 103, 242, 335, 439, 936, 1321, 1445, 1900
BceAI	ACGGC	3 cut(s)	875, 1309, 1979
BciT130I	CCWGG	1 cut(s)	1857
BciVI	GTATCC	1 cut(s)	1090
BcoDI	GTCTC	4 cut(s)	239, 938, 1022, 1082
BfaI	CTAG	9 cut(s)	255, 417, 489, 509, 872, 1122, 1416, 1481, 1976
BfrI	CTTAAG	1 cut(s)	518
BfuAI	ACCTGC	1 cut(s)	178
BfuI	GTATCC	1 cut(s)	1090
BglII	AGATCT	1 cut(s)	1312
BisI	GCNGC	6 cut(s)	9, 821, 1161, 1164, 1515, 1844
BlpI	GCTNAGC	1 cut(s)	1191
BlsI	GCNGC	6 cut(s)	10, 822, 1162, 1165, 1516, 1845
BmcAI	AGTACT	1 cut(s)	1826
Bme1390I	CCNGG	1 cut(s)	1857
Bme18I	GGWCC	1 cut(s)	1222
BmeT110I	CYCGRG	1 cut(s)	1242
BmgT120I	GGNCC	2 cut(s)	956, 1222
BmiI	GGNNCC	4 cut(s)	220, 346, 832, 957
BmrFI	CCNGG	1 cut(s)	1857
BmsI	GCATC	5 cut(s)	282, 884, 967, 2019, 2056
BmtI	GCTAGC	1 cut(s)	492
BpiI	GAAGAC	1 cut(s)	2010
Bpu1102I	GCTNAGC	1 cut(s)	1191
Bpu14I	TTCGAA	2 cut(s)	137, 1180
Bsa29I	ATCGAT	1 cut(s)	55
BsaAI	YACGTR	2 cut(s)	804, 1319
BsaBI	GATNNNNATC	1 cut(s)	1880
BsaHI	GRCGYC	1 cut(s)	1852
BsaI	GGTCTC	2 cut(s)	239, 1082
BsaJI	CCNNGG	1 cut(s)	1092
BsaXI	ACNNNNNCTCC	2 cut(s)	1743, 1773
Bsc4I	CCNNNNNNNGG	5 cut(s)	255, 840, 987, 1748, 1867
Bse1I	ACTGG	2 cut(s)	1057, 1784
Bse3DI	GCAATG	3 cut(s)	40, 766, 1290
Bse8I	GATNNNNATC	1 cut(s)	1880
BseBI	CCWGG	1 cut(s)	1857
BseCI	ATCGAT	1 cut(s)	55
BseDI	CCNNGG	1 cut(s)	1092
BseGI	GGATG	6 cut(s)	234, 346, 849, 982, 1332, 1579
BseJI	GATNNNNATC	1 cut(s)	1880
BseLI	CCNNNNNNNGG	5 cut(s)	255, 840, 987, 1748, 1867
BseMI	GCAATG	3 cut(s)	40, 766, 1290
BseMII	CTCAG	5 cut(s)	198, 1012, 1033, 1205, 1962
BseNI	ACTGG	2 cut(s)	1057, 1784
BseSI	GKGCMC	1 cut(s)	1712
BseXI	GCAGC	5 cut(s)	807, 1147, 1150, 1526, 1855
BsgI	GTGCAG	2 cut(s)	487, 1131
Bsh1236I	CGCG	1 cut(s)	464
BshFI	GGCC	3 cut(s)	890, 958, 1860
BshNI	GGYRCC	1 cut(s)	830
BshVI	ATCGAT	1 cut(s)	55
BsiHKAI	GWGCWC	1 cut(s)	1712
BsiHKCI	CYCGRG	1 cut(s)	1242
BslI	CCNNNNNNNGG	5 cut(s)	255, 840, 987, 1748, 1867
BsmAI	GTCTC	4 cut(s)	239, 938, 1022, 1082
BsmI	GAATGC	2 cut(s)	365, 585
BsnI	GGCC	3 cut(s)	890, 958, 1860
Bso31I	GGTCTC	2 cut(s)	239, 1082
BsoBI	CYCGRG	1 cut(s)	1242
Bsp119I	TTCGAA	2 cut(s)	137, 1180
Bsp1286I	GDGCHC	1 cut(s)	1712
Bsp143I	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
Bsp1720I	GCTNAGC	1 cut(s)	1191
Bsp19I	CCATGG	1 cut(s)	1092
BspACI	CCGC	3 cut(s)	9, 351, 1841
BspANI	GGCC	3 cut(s)	890, 958, 1860
BspCNI	CTCAG	5 cut(s)	199, 1011, 1032, 1204, 1963
BspDI	ATCGAT	1 cut(s)	55
BspFNI	CGCG	1 cut(s)	464
BspHI	TCATGA	2 cut(s)	1227, 1236
BspLI	GGNNCC	4 cut(s)	220, 346, 832, 957
BspMI	ACCTGC	1 cut(s)	178
BspOI	GCTAGC	1 cut(s)	492
BspPI	GGATC	3 cut(s)	213, 226, 801
BspT104I	TTCGAA	2 cut(s)	137, 1180
BspT107I	GGYRCC	1 cut(s)	830
BspTI	CTTAAG	1 cut(s)	518
BspTNI	GGTCTC	2 cut(s)	239, 1082
BsrDI	GCAATG	3 cut(s)	40, 766, 1290
BsrI	ACTGG	2 cut(s)	1057, 1784
BssECI	CCNNGG	1 cut(s)	1092
BssMI	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
BssNI	GRCGYC	1 cut(s)	1852
BssT1I	CCWWGG	1 cut(s)	1092
Bst2UI	CCWGG	1 cut(s)	1857
Bst6I	CTCTTC	3 cut(s)	99, 312, 1629
BstACI	GRCGYC	1 cut(s)	1852
BstAFI	CTTAAG	1 cut(s)	518
BstBAI	YACGTR	2 cut(s)	804, 1319
BstBI	TTCGAA	2 cut(s)	137, 1180
BstC8I	GCNNGC	2 cut(s)	466, 490
BstDEI	CTNAG	6 cut(s)	145, 207, 998, 1019, 1191, 1971
BstDSI	CCRYGG	1 cut(s)	1092
BstF5I	GGATG	6 cut(s)	234, 346, 849, 982, 1332, 1579
BstFNI	CGCG	1 cut(s)	464
BstHHI	GCGC	1 cut(s)	297
BstKTI	GATC	7 cut(s)	59, 221, 770, 796, 995, 1315, 1600
BstMAI	GTCTC	4 cut(s)	239, 938, 1022, 1082
BstMBI	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
BstMWI	GCNNNNNNNGC	5 cut(s)	39, 562, 1160, 1849, 1972
BstNI	CCWGG	1 cut(s)	1857
BstNSI	RCATGY	2 cut(s)	46, 1804
BstSCI	CCNGG	1 cut(s)	1855
BstSLI	GKGCMC	1 cut(s)	1712
BstSNI	TACGTA	1 cut(s)	1319
BstUI	CGCG	1 cut(s)	464
BstV1I	GCAGC	5 cut(s)	807, 1147, 1150, 1526, 1855
BstV2I	GAAGAC	1 cut(s)	2010
BstX2I	RGATCY	2 cut(s)	218, 1312
BstXI	CCANNNNNNTGG	1 cut(s)	790
BstYI	RGATCY	2 cut(s)	218, 1312
Bsu15I	ATCGAT	1 cut(s)	55
BsuI	GTATCC	1 cut(s)	1090
BsuRI	GGCC	3 cut(s)	890, 958, 1860
BsuTUI	ATCGAT	1 cut(s)	55
BtgI	CCRYGG	1 cut(s)	1092
BtsCI	GGATG	6 cut(s)	234, 346, 849, 982, 1332, 1579
BtsIMutI	CAGTG	5 cut(s)	1050, 1268, 1764, 1791, 1870
BveI	ACCTGC	1 cut(s)	178
Cac8I	GCNNGC	2 cut(s)	466, 490
CciI	TCATGA	2 cut(s)	1227, 1236
CfoI	GCGC	1 cut(s)	297
Cfr13I	GGNCC	2 cut(s)	956, 1222
ClaI	ATCGAT	1 cut(s)	55
CseI	GACGC	1 cut(s)	1841
Csp6I	GTAC	5 cut(s)	934, 1207, 1473, 1687, 1825
CviAII	CATG	9 cut(s)	43, 729, 886, 1093, 1196, 1228, 1237, 1567, 1801
CviQI	GTAC	5 cut(s)	934, 1207, 1473, 1687, 1825
DdeI	CTNAG	6 cut(s)	145, 207, 998, 1019, 1191, 1971
DpnI	GATC	7 cut(s)	58, 220, 769, 795, 994, 1314, 1599
DpnII	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
DraIII	CACNNNGTG	1 cut(s)	1867
EaeI	YGGCCR	1 cut(s)	888
Eam1104I	CTCTTC	3 cut(s)	99, 312, 1629
EarI	CTCTTC	3 cut(s)	99, 312, 1629
Eco105I	TACGTA	1 cut(s)	1319
Eco130I	CCWWGG	1 cut(s)	1092
Eco31I	GGTCTC	2 cut(s)	239, 1082
Eco32I	GATATC	1 cut(s)	1882
Eco47I	GGWCC	1 cut(s)	1222
Eco57I	CTGAAG	1 cut(s)	138
Eco88I	CYCGRG	1 cut(s)	1242
EcoO109I	RGGNCCY	2 cut(s)	956, 1222
EcoRI	GAATTC	1 cut(s)	1763
EcoRII	CCWGG	1 cut(s)	1855
EcoRV	GATATC	1 cut(s)	1882
EcoT14I	CCWWGG	1 cut(s)	1092
ErhI	CCWWGG	1 cut(s)	1092
FaeI	CATG	9 cut(s)	46, 732, 889, 1096, 1199, 1231, 1240, 1570, 1804
FalI	AAGNNNNNCTT	2 cut(s)	1811, 1843
FatI	CATG	9 cut(s)	42, 728, 885, 1092, 1195, 1227, 1236, 1566, 1800
FauI	CCCGC	1 cut(s)	358
FblI	GTMKAC	1 cut(s)	1338
Fnu4HI	GCNGC	6 cut(s)	9, 821, 1161, 1164, 1515, 1844
FokI	GGATG	6 cut(s)	221, 353, 856, 989, 1339, 1566
Fsp4HI	GCNGC	6 cut(s)	9, 821, 1161, 1164, 1515, 1844
FspAI	RTGCGCAY	1 cut(s)	296
FspBI	CTAG	9 cut(s)	255, 417, 489, 509, 872, 1122, 1416, 1481, 1976
FspI	TGCGCA	1 cut(s)	296
GlaI	GCGC	1 cut(s)	296
GluI	GCNGC	6 cut(s)	9, 821, 1161, 1164, 1515, 1844
HaeIII	GGCC	3 cut(s)	890, 958, 1860
HgaI	GACGC	1 cut(s)	1841
HhaI	GCGC	1 cut(s)	297
Hin1I	GRCGYC	1 cut(s)	1852
Hin1II	CATG	9 cut(s)	46, 732, 889, 1096, 1199, 1231, 1240, 1570, 1804
Hin6I	GCGC	1 cut(s)	295
HinP1I	GCGC	1 cut(s)	295
HincII	GTYRAC	2 cut(s)	284, 412
HindII	GTYRAC	2 cut(s)	284, 412
HpaI	GTTAAC	1 cut(s)	412
HphI	GGTGA	7 cut(s)	86, 1072, 1435, 1607, 1885, 1961, 2036
Hpy166II	GTNNAC	9 cut(s)	284, 412, 430, 642, 807, 1339, 1687, 1710, 2044
Hpy188I	TCNGA	2 cut(s)	307, 2028
Hpy188III	TCNNGA	9 cut(s)	314, 502, 914, 1228, 1237, 1663, 1742, 1940, 2083
Hpy8I	GTNNAC	9 cut(s)	284, 412, 430, 642, 807, 1339, 1687, 1710, 2044
Hpy99I	CGWCG	1 cut(s)	896
HpyAV	CCTTC	7 cut(s)	400, 646, 1039, 1069, 1177, 1669, 2089
HpyCH4IV	ACGT	6 cut(s)	803, 936, 1100, 1185, 1318, 1644
HpyCH4V	TGCA	8 cut(s)	187, 468, 1070, 1112, 1469, 1539, 1710, 2069
HpyF10VI	GCNNNNNNNGC	5 cut(s)	39, 562, 1160, 1849, 1972
HpyF3I	CTNAG	6 cut(s)	145, 207, 998, 1019, 1191, 1971
HpySE526I	ACGT	6 cut(s)	803, 936, 1100, 1185, 1318, 1644
Hsp92I	GRCGYC	1 cut(s)	1852
Hsp92II	CATG	9 cut(s)	46, 732, 889, 1096, 1199, 1231, 1240, 1570, 1804
HspAI	GCGC	1 cut(s)	295
KspAI	GTTAAC	1 cut(s)	412
Kzo9I	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
LmnI	GCTCC	2 cut(s)	163, 1280
Lsp1109I	GCAGC	5 cut(s)	807, 1147, 1150, 1526, 1855
LweI	GCATC	5 cut(s)	282, 884, 967, 2019, 2056
MaeI	CTAG	9 cut(s)	255, 417, 489, 509, 872, 1122, 1416, 1481, 1976
MaeII	ACGT	6 cut(s)	803, 936, 1100, 1185, 1318, 1644
MaeIII	GTNAC	5 cut(s)	586, 1048, 1199, 1573, 1922
MalI	GATC	7 cut(s)	58, 220, 769, 795, 994, 1314, 1599
MboI	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
MboII	GAAGA	9 cut(s)	116, 125, 144, 329, 661, 1646, 1804, 1898, 2015
MflI	RGATCY	2 cut(s)	218, 1312
MhlI	GDGCHC	1 cut(s)	1712
MlyI	GAGTC	4 cut(s)	598, 802, 1024, 1234
MseI	TTAA	7 cut(s)	23, 411, 519, 864, 1302, 1649, 1901
MslI	CAYNNNNRTG	2 cut(s)	1442, 1571
MspCI	CTTAAG	1 cut(s)	518
MspR9I	CCNGG	1 cut(s)	1857
Mva1269I	GAATGC	2 cut(s)	365, 585
MvaI	CCWGG	1 cut(s)	1857
MvnI	CGCG	1 cut(s)	464
MwoI	GCNNNNNNNGC	5 cut(s)	39, 562, 1160, 1849, 1972
NcoI	CCATGG	1 cut(s)	1092
NdeII	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
NheI	GCTAGC	1 cut(s)	488
NlaIII	CATG	9 cut(s)	46, 732, 889, 1096, 1199, 1231, 1240, 1570, 1804
NlaIV	GGNNCC	4 cut(s)	220, 346, 832, 957
NmuCI	GTSAC	3 cut(s)	1048, 1573, 1922
NsbI	TGCGCA	1 cut(s)	296
NspI	RCATGY	2 cut(s)	46, 1804
NspV	TTCGAA	2 cut(s)	137, 1180
PagI	TCATGA	2 cut(s)	1227, 1236
PciI	ACATGT	1 cut(s)	1800
PcsI	WCGNNNNNNNCGW	1 cut(s)	959
PctI	GAATGC	2 cut(s)	365, 585
PfeI	GAWTC	6 cut(s)	149, 302, 514, 910, 917, 1063
PflMI	CCANNNNNTGG	1 cut(s)	1867
PkrI	GCNGC	6 cut(s)	10, 822, 1162, 1165, 1516, 1845
PleI	GAGTC	4 cut(s)	598, 802, 1023, 1234
PpsI	GAGTC	4 cut(s)	598, 802, 1023, 1234
Ppu21I	YACGTR	2 cut(s)	804, 1319
PpuMI	RGGWCCY	1 cut(s)	1222
PscI	ACATGT	1 cut(s)	1800
Psp1406I	AACGTT	1 cut(s)	1185
Psp5II	RGGWCCY	1 cut(s)	1222
Psp6I	CCWGG	1 cut(s)	1855
PspGI	CCWGG	1 cut(s)	1855
PspN4I	GGNNCC	4 cut(s)	220, 346, 832, 957
PspPI	GGNCC	2 cut(s)	956, 1222
PspPPI	RGGWCCY	1 cut(s)	1222
PsrI	GAACNNNNNNTAC	2 cut(s)	78, 110
PsuI	RGATCY	2 cut(s)	218, 1312
RsaI	GTAC	5 cut(s)	935, 1208, 1474, 1688, 1826
RsaNI	GTAC	5 cut(s)	934, 1207, 1473, 1687, 1825
RseI	CAYNNNNRTG	2 cut(s)	1442, 1571
SaqAI	TTAA	7 cut(s)	23, 411, 519, 864, 1302, 1649, 1901
SatI	GCNGC	6 cut(s)	9, 821, 1161, 1164, 1515, 1844
Sau3AI	GATC	7 cut(s)	56, 218, 767, 793, 992, 1312, 1597
Sau96I	GGNCC	2 cut(s)	956, 1222
ScaI	AGTACT	1 cut(s)	1826
SchI	GAGTC	4 cut(s)	598, 802, 1024, 1234
ScrFI	CCNGG	1 cut(s)	1857
SduI	GDGCHC	1 cut(s)	1712
SfaNI	GCATC	5 cut(s)	282, 884, 967, 2019, 2056
SfuI	TTCGAA	2 cut(s)	137, 1180
SinI	GGWCC	1 cut(s)	1222
SmiMI	CAYNNNNRTG	2 cut(s)	1442, 1571
SmlI	CTYRAG	1 cut(s)	518
SmoI	CTYRAG	1 cut(s)	518
SnaBI	TACGTA	1 cut(s)	1319
SsiI	CCGC	3 cut(s)	9, 351, 1841
SspI	AATATT	2 cut(s)	1176, 1918
SspMI	CTAG	9 cut(s)	255, 417, 489, 509, 872, 1122, 1416, 1481, 1976
StyD4I	CCNGG	1 cut(s)	1855
StyI	CCWWGG	1 cut(s)	1092
TaiI	ACGT	6 cut(s)	806, 939, 1103, 1188, 1321, 1647
TatI	WGTACW	4 cut(s)	1206, 1472, 1686, 1824
TauI	GCSGC	1 cut(s)	11
TfiI	GAWTC	6 cut(s)	149, 302, 514, 910, 917, 1063
Tru1I	TTAA	7 cut(s)	23, 411, 519, 864, 1302, 1649, 1901
Tru9I	TTAA	7 cut(s)	23, 411, 519, 864, 1302, 1649, 1901
TscAI	CASTG	5 cut(s)	1057, 1275, 1764, 1791, 1870
TseFI	GTSAC	3 cut(s)	1048, 1573, 1922
TseI	GCWGC	5 cut(s)	820, 1160, 1163, 1514, 1843
Tsp45I	GTSAC	3 cut(s)	1048, 1573, 1922
TspDTI	ATGAA	9 cut(s)	93, 132, 695, 874, 1225, 1555, 1655, 1692, 1946
TspGWI	ACGGA	2 cut(s)	951, 1293
TspRI	CASTG	5 cut(s)	1057, 1275, 1764, 1791, 1870
Van91I	CCANNNNNTGG	1 cut(s)	1867
Vha464I	CTTAAG	1 cut(s)	518
VneI	GTGCAC	1 cut(s)	1708
VpaK11BI	GGWCC	1 cut(s)	1222
XapI	RAATTY	5 cut(s)	746, 881, 1406, 1696, 1763
XceI	RCATGY	2 cut(s)	46, 1804
XcmI	CCANNNNNNNNNTGG	2 cut(s)	787, 1099
XmiI	GTMKAC	1 cut(s)	1338
XspI	CTAG	9 cut(s)	255, 417, 489, 509, 872, 1122, 1416, 1481, 1976
ZrmI	AGTACT	1 cut(s)	1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.