Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

67725875 .. 67729068

Gene Structure 3194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG504900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGCTAGCTTTTTGTTGGATCAGGGTTTTAGGTGATAGGGGTTTAATGAAAGCCGCAGAGAAAGCTTCAAAGGGCGGCGAGATAAGCATGTCGGAGAAGCAATCTGCCAATGGAGGTGAAGTTATAGTGGAACTTCAAAATGTTGGGACGTATGAAGGTAAAGGGTCTCCTTCAACCAAGCAAAGCAAAGTGAACTTGGGAGTGACCACTGAGTCTAGTAGTACCAGGTTCGGTGGGTTTCCTTCACTGGATGTTTCAAGAGCCAGTCCCAACCCCGGTAAGCCTCCGAGGCCCCCCGCCCGCAATGAGAGCACCAATAGGAGAAAGTCATTTAATAGGTCAGTTATCTCCAAACCCAAGTCAAGATTTGGTGAACCATCGCCTGTTCTGAATGAAGATGGTAGTTCAGATCATGTTGGTTCCCCATATAGGGGGGCTTCATTCAGTAGGGCTTCCCCAAATAACATATCAGGAGCTAGGGCCATATCCATCTCTTCTAATAGGAATGCGTCTCCAGGCAGGACCAAAGATAAGGAGGATGAAGAGATTTACAAGAAGGTTAAATTGAGTAGAGATAAGCACGGGAAAATGAACAAGATACTCTTGGCTGAGTTATTTGTTTTCCTGTGCATTTTGGGTTGTTTAGTGGCTAGCTTGACTGTGGAGAAACTAGAGAATTATATGGTTTGGGGCTTGGAGATTTGGAAATGGTGTGTGCTTGTCATGGTGATATTCAGTGGCATGTTGGTTACCAATTGGGTTATGCATTTGATAGTTTTTCTGATCGAGTGCAATTTTTTGCTTCGGAAGAAGGTTTTGTATTTTGTTCATGGAATGAAGAAGAGTGTTCAGGTTTTCTTGTGGTTGTCTCTGGTTCTTCTCACATGGCTACTGTTGTTCAATCGTGGGGTTAAGCGGTCAAAGACTACCACCAAGATTTTAAATTATGTTACATGGACTATTGTCTCACTTCTCATTGGGGCATTTTTATGGTTGTTAAAAACATTGTTGCTTAAGATCTTAGCATCTAGTTTCCATGTGAATACCTTCTTTGATAGAATTCAAGAATCAATCTTCCATCAGTATGTGCTTCAGACACTTTCGGGGCATCCGCTTATGGAGGAGGCTGATAGGAACGGTGGGAAATCACCGAGCACTAGCAAACTGAGTTACAGAGCGACAAAGAAGGCAAAGGCTGGAAAGGAAAAAGAGGTCATTGACATGACAAAGCTTCAACAGATAAAGCAAGAGAAGGTTTCTTCTTGGACCATGAAGGTCTTGGTGGATGCAGTAACTAGTTCAGGGCTGTCCACGATCTCCCATACATTGGATGAGATGGAGGGTCTGAATGAACAGAGAGATAAGGAGATTACCAGTGAGATGGAAGCAACTGCTGCTGCCTATGACATATTCCTTAACGTTGCTCCGCTGGGTGCTAATTACATTGAGGAGTGGGACCTCTTGAGGTTCATGATCGAGGAAGAAGTGGAGCTTGTGTGGCCGCTAATTGACGTAAATAAGACTGGACAAGTTGATAGAAAAACTCTAACAGAGTGGGTGGTGAAGGTCTACAATGGTCGCAAAGCATTAGCTCATTCATTAACCGACACCAAAACAGCCGTAAAACAATTGAACAAACTTGTGACTAGTGTCCTGGTTATTATTACCATTATAGTGTGGCTTCTGTTGATGGAAATTGCAACTACAAAAGTACTTGTCTTCCTCTCATCACAGCTCGTAGTGGCAGCTTTTATGTTTGGAAACACTTGCAAGACTATATTCGAAGCTATTATCTTCGTTTTTGTAATGCATCCATTTGACGTTGGTGACCGCTGCGTTATTGATGGCGTTCAGTTAATGGTTGAGGAGATGAACATCTTAACTACAGTCTTCTTAAAACTCAATCAAGAAAAGGTATACTATCCCAATTCAGTTTTATCCACAAAACCGATCAGCAATTATTACAGAAGTTCAAATATGGGTGATAATGTGGAGTTCTCAATTGCTTTTACTACACCAGTGAAGAAGATAGGCGAGCTGAGAGAGAAAGTAAAGGAGTATGTGGAGGGGAATCCGACGCTTTGGCATCCAAACCACCAAATTGTGGTGCTTGAGATCGAAAATGTGAATAAGTTAAAGCTGGCACTCTACTTCAGTCACACGATGAACTTTCAAGAATGGGGAGAAAAGCAAAAGCGGAGAAGTGAAATGGTCATGGCATTGAAGAAATGTTTGGAGGACCTACACATTACATACTATCTGCTGCCCCTAGAAGTTCGTCTCACTGAAACTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

765

Amino Acids

86.54

Weight (kDa)

9.26

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Msy1	PF25886	203 - 345	5.5e-06	Mechanosensitive ion channel protein Msy1-like, transmembrane domain
MS_channel_2nd	PF00924	598 - 655	4.9e-09	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	211
AccB7I	CCANNNNNTGG	2 cut(s)	1327, 2104
AccI	GTMKAC	2 cut(s)	1569, 1917
AclI	AACGTT	1 cut(s)	1419
AclWI	GGATC	1 cut(s)	26
AcoI	YGGCCR	1 cut(s)	1499
AcsI	RAATTY	1 cut(s)	1059
AcuI	CTGAAG	2 cut(s)	1076, 2137
AfaI	GTAC	2 cut(s)	223, 1713
AfiI	CCNNNNNNNGG	6 cut(s)	275, 429, 430, 431, 1327, 2104
AflII	CTTAAG	1 cut(s)	1013
AhlI	ACTAGT	2 cut(s)	1295, 1646
AjnI	CCWGG	3 cut(s)	224, 514, 1653
AjuI	GAANNNNNNNTTGG	2 cut(s)	2216, 2248
Alw21I	GWGCWC	2 cut(s)	314, 1157
Alw26I	GTCTC	5 cut(s)	171, 516, 873, 970, 2285
AlwI	GGATC	1 cut(s)	26
AoxI	GGCC	3 cut(s)	290, 480, 1499
ApeKI	GCWGC	5 cut(s)	1394, 1397, 1745, 1833, 2263
ApoI	RAATTY	1 cut(s)	1059
Asp700I	GAANNNNTTC	1 cut(s)	1046
AspS9I	GGNCC	6 cut(s)	291, 480, 522, 1266, 1456, 2239
AsuC2I	CCSGG	1 cut(s)	276
AsuHPI	GGTGA	8 cut(s)	44, 128, 383, 739, 1140, 1573, 1838, 1994
AsuII	TTCGAA	1 cut(s)	1782
AsuNHI	GCTAGC	2 cut(s)	4, 650
AvaII	GGWCC	4 cut(s)	522, 1266, 1456, 2239
BbsI	GAAGAC	2 cut(s)	1711, 1882
Bbv12I	GWGCWC	2 cut(s)	314, 1157
BbvI	GCAGC	5 cut(s)	1381, 1384, 1757, 1820, 2250
BccI	CCATC	8 cut(s)	385, 392, 497, 1086, 1330, 1375, 1684, 1838
BceAI	ACGGC	1 cut(s)	1604
BciT130I	CCWGG	3 cut(s)	226, 516, 1655
BcnI	CCSGG	1 cut(s)	276
BcoDI	GTCTC	5 cut(s)	171, 516, 873, 970, 2285
BcuI	ACTAGT	2 cut(s)	1295, 1646
BfmI	CTRYAG	1 cut(s)	1884
BfrI	CTTAAG	1 cut(s)	1013
BglI	GCCNNNNNGGC	1 cut(s)	289
BglII	AGATCT	1 cut(s)	1017
BisI	GCNGC	8 cut(s)	54, 76, 1395, 1398, 1502, 1746, 1834, 2264
BlsI	GCNGC	8 cut(s)	55, 77, 1396, 1399, 1503, 1747, 1835, 2265
BmcAI	AGTACT	1 cut(s)	1713
Bme1390I	CCNGG	4 cut(s)	226, 276, 516, 1655
Bme18I	GGWCC	4 cut(s)	522, 1266, 1456, 2239
BmgT120I	GGNCC	6 cut(s)	291, 480, 522, 1266, 1456, 2239
BmiI	GGNNCC	3 cut(s)	293, 421, 1457
BmrFI	CCNGG	4 cut(s)	226, 276, 516, 1655
BmsI	GCATC	5 cut(s)	1034, 1117, 1276, 1819, 2095
BmtI	GCTAGC	2 cut(s)	8, 654
BoxI	GACNNNNGTC	2 cut(s)	962, 1649
BpiI	GAAGAC	2 cut(s)	1711, 1882
BpmI	CTGGAG	1 cut(s)	498
Bpu14I	TTCGAA	1 cut(s)	1782
BpuEI	CTTGAG	2 cut(s)	1483, 2132
BpuMI	CCSGG	1 cut(s)	276
BsaBI	GATNNNNATC	1 cut(s)	1874
BsaI	GGTCTC	1 cut(s)	171
BsaJI	CCNNGG	2 cut(s)	274, 287
BsaXI	ACNNNNNCTCC	4 cut(s)	105, 135, 1481, 1511
Bsc4I	CCNNNNNNNGG	6 cut(s)	275, 429, 430, 431, 1327, 2104
Bse1I	ACTGG	5 cut(s)	252, 264, 1374, 1528, 2018
Bse3DI	GCAATG	1 cut(s)	310
Bse8I	GATNNNNATC	1 cut(s)	1874
BseBI	CCWGG	3 cut(s)	226, 516, 1655
BseDI	CCNNGG	2 cut(s)	274, 287
BseGI	GGATG	7 cut(s)	256, 544, 1108, 1291, 1336, 1810, 2086
BseJI	GATNNNNATC	1 cut(s)	1874
BseLI	CCNNNNNNNGG	6 cut(s)	275, 429, 430, 431, 1327, 2104
BseMI	GCAATG	1 cut(s)	310
BseMII	CTCAG	4 cut(s)	201, 600, 1157, 2030
BseNI	ACTGG	5 cut(s)	252, 264, 1374, 1528, 2018
BseRI	GAGGAG	3 cut(s)	1136, 1463, 1880
BseXI	GCAGC	5 cut(s)	1381, 1384, 1757, 1820, 2250
BseYI	CCCAGC	1 cut(s)	1429
BshFI	GGCC	3 cut(s)	292, 482, 1501
BsiHKAI	GWGCWC	2 cut(s)	314, 1157
BsiSI	CCGG	1 cut(s)	276
BslFI	GGGAC	3 cut(s)	160, 252, 1469
BslI	CCNNNNNNNGG	6 cut(s)	275, 429, 430, 431, 1327, 2104
BsmAI	GTCTC	5 cut(s)	171, 516, 873, 970, 2285
BsmBI	CGTCTC	2 cut(s)	516, 2285
BsmFI	GGGAC	3 cut(s)	160, 252, 1469
BsmI	GAATGC	1 cut(s)	511
BsnI	GGCC	3 cut(s)	292, 482, 1501
Bso31I	GGTCTC	1 cut(s)	171
Bsp119I	TTCGAA	1 cut(s)	1782
Bsp1286I	GDGCHC	2 cut(s)	314, 1157
Bsp143I	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
BspANI	GGCC	3 cut(s)	292, 482, 1501
BspCNI	CTCAG	4 cut(s)	202, 601, 1158, 2031
BspHI	TCATGA	1 cut(s)	1470
BspLI	GGNNCC	3 cut(s)	293, 421, 1457
BspOI	GCTAGC	2 cut(s)	8, 654
BspPI	GGATC	1 cut(s)	26
BspT104I	TTCGAA	1 cut(s)	1782
BspTI	CTTAAG	1 cut(s)	1013
BspTNI	GGTCTC	1 cut(s)	171
BsrDI	GCAATG	1 cut(s)	310
BsrI	ACTGG	5 cut(s)	252, 264, 1374, 1528, 2018
BssECI	CCNNGG	2 cut(s)	274, 287
BssMI	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
BssNAI	GTATAC	1 cut(s)	1918
Bst1107I	GTATAC	1 cut(s)	1918
Bst2UI	CCWGG	3 cut(s)	226, 516, 1655
Bst4CI	ACNGT	4 cut(s)	661, 894, 1139, 1888
Bst6I	CTCTTC	3 cut(s)	499, 537, 836
BstAFI	CTTAAG	1 cut(s)	1013
BstAPI	GCANNNNNTGC	1 cut(s)	1394
BstBI	TTCGAA	1 cut(s)	1782
BstC8I	GCNNGC	5 cut(s)	6, 301, 652, 2036, 2142
BstDEI	CTNAG	5 cut(s)	210, 609, 1021, 1166, 2039
BstEII	GGTNACC	2 cut(s)	748, 1826
BstF5I	GGATG	7 cut(s)	256, 544, 1108, 1291, 1336, 1810, 2086
BstKTI	GATC	8 cut(s)	21, 412, 786, 1020, 1317, 1476, 1953, 2118
BstMAI	GTCTC	5 cut(s)	171, 516, 873, 970, 2285
BstMBI	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
BstMWI	GCNNNNNNNGC	6 cut(s)	62, 84, 289, 309, 1394, 1498
BstNI	CCWGG	3 cut(s)	226, 516, 1655
BstNSI	RCATGY	2 cut(s)	91, 745
BstPAI	GACNNNNGTC	2 cut(s)	962, 1649
BstPI	GGTNACC	2 cut(s)	748, 1826
BstSCI	CCNGG	4 cut(s)	224, 274, 514, 1653
BstSFI	CTRYAG	1 cut(s)	1884
BstV1I	GCAGC	5 cut(s)	1381, 1384, 1757, 1820, 2250
BstV2I	GAAGAC	2 cut(s)	1711, 1882
BstX2I	RGATCY	1 cut(s)	1017
BstXI	CCANNNNNNTGG	1 cut(s)	1381
BstYI	RGATCY	1 cut(s)	1017
BstZ17I	GTATAC	1 cut(s)	1918
BsuRI	GGCC	3 cut(s)	292, 482, 1501
BtgZI	GCGATG	1 cut(s)	363
BtsCI	GGATG	7 cut(s)	256, 544, 1108, 1291, 1336, 1810, 2086
BtsIMutI	CAGTG	6 cut(s)	207, 245, 742, 1381, 2025, 2283
Cac8I	GCNNGC	5 cut(s)	6, 301, 652, 2036, 2142
CciI	TCATGA	1 cut(s)	1470
Cfr13I	GGNCC	6 cut(s)	291, 480, 522, 1266, 1456, 2239
CseI	GACGC	2 cut(s)	498, 2086
CsiI	ACCWGGT	1 cut(s)	224
Csp6I	GTAC	2 cut(s)	222, 1712
CviQI	GTAC	2 cut(s)	222, 1712
DdeI	CTNAG	5 cut(s)	210, 609, 1021, 1166, 2039
DpnI	GATC	8 cut(s)	20, 411, 785, 1019, 1316, 1475, 1952, 2117
DpnII	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
DraI	TTTAAA	1 cut(s)	942
DrdI	GACNNNNNNGTC	1 cut(s)	211
DseDI	GACNNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	1 cut(s)	1499
Eam1104I	CTCTTC	3 cut(s)	499, 537, 836
EarI	CTCTTC	3 cut(s)	499, 537, 836
Eco31I	GGTCTC	1 cut(s)	171
Eco47I	GGWCC	4 cut(s)	522, 1266, 1456, 2239
Eco57I	CTGAAG	2 cut(s)	1076, 2137
Eco91I	GGTNACC	2 cut(s)	748, 1826
EcoO109I	RGGNCCY	3 cut(s)	291, 1456, 2239
EcoO65I	GGTNACC	2 cut(s)	748, 1826
EcoRI	GAATTC	1 cut(s)	1059
EcoRII	CCWGG	3 cut(s)	224, 514, 1653
EcoT22I	ATGCAT	2 cut(s)	768, 1812
Esp3I	CGTCTC	2 cut(s)	516, 2285
FalI	AAGNNNNNCTT	4 cut(s)	587, 619, 1476, 1508
FaqI	GGGAC	3 cut(s)	160, 252, 1469
FauI	CCCGC	2 cut(s)	304, 308
FblI	GTMKAC	2 cut(s)	1569, 1917
Fnu4HI	GCNGC	8 cut(s)	54, 76, 1395, 1398, 1502, 1746, 1834, 2264
FokI	GGATG	7 cut(s)	263, 551, 1095, 1298, 1343, 1797, 2073
Fsp4HI	GCNGC	8 cut(s)	54, 76, 1395, 1398, 1502, 1746, 1834, 2264
GluI	GCNGC	8 cut(s)	54, 76, 1395, 1398, 1502, 1746, 1834, 2264
GsaI	CCCAGC	1 cut(s)	1433
GsuI	CTGGAG	1 cut(s)	498
HaeIII	GGCC	3 cut(s)	292, 482, 1501
HapII	CCGG	1 cut(s)	276
HgaI	GACGC	2 cut(s)	498, 2086
HindIII	AAGCTT	2 cut(s)	63, 1229
HinfI	GANTC	3 cut(s)	212, 1067, 2071
HpaII	CCGG	1 cut(s)	276
HphI	GGTGA	8 cut(s)	44, 128, 383, 739, 1140, 1573, 1838, 1994
Hpy166II	GTNNAC	5 cut(s)	193, 374, 1311, 1570, 1918
Hpy188I	TCNGA	9 cut(s)	94, 288, 390, 409, 783, 807, 1095, 1347, 2076
Hpy188III	TCNNGA	8 cut(s)	258, 363, 471, 1064, 1462, 1471, 1907, 2174
Hpy8I	GTNNAC	5 cut(s)	193, 374, 1311, 1570, 1918
Hpy99I	CGWCG	1 cut(s)	2080
HpyCH4III	ACNGT	4 cut(s)	661, 894, 1139, 1888
HpyCH4IV	ACGT	4 cut(s)	149, 1419, 1512, 1821
HpyCH4V	TGCA	7 cut(s)	630, 766, 792, 1289, 1700, 1770, 1810
HpyF10VI	GCNNNNNNNGC	6 cut(s)	62, 84, 289, 309, 1394, 1498
HpyF3I	CTNAG	5 cut(s)	210, 609, 1021, 1166, 2039
HpySE526I	ACGT	4 cut(s)	149, 1419, 1512, 1821
Kzo9I	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
LmnI	GCTCC	3 cut(s)	473, 1429, 1489
Lsp1109I	GCAGC	5 cut(s)	1381, 1384, 1757, 1820, 2250
LweI	GCATC	5 cut(s)	1034, 1117, 1276, 1819, 2095
MabI	ACCWGGT	1 cut(s)	224
MaeII	ACGT	4 cut(s)	149, 1419, 1512, 1821
MaeIII	GTNAC	8 cut(s)	202, 748, 949, 1169, 1291, 1642, 1826, 2156
MalI	GATC	8 cut(s)	20, 411, 785, 1019, 1316, 1475, 1952, 2117
MboI	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
MfeI	CAATTG	3 cut(s)	754, 1628, 2001
MflI	RGATCY	1 cut(s)	1017
MhlI	GDGCHC	2 cut(s)	314, 1157
MlyI	GAGTC	1 cut(s)	221
MmeI	TCCRAC	2 cut(s)	72, 2099
Mph1103I	ATGCAT	2 cut(s)	768, 1812
MroXI	GAANNNNTTC	1 cut(s)	1046
MslI	CAYNNNNRTG	4 cut(s)	988, 1083, 1220, 1673
MspA1I	CMGCKG	2 cut(s)	1429, 1833
MspCI	CTTAAG	1 cut(s)	1013
MspI	CCGG	1 cut(s)	276
MspR9I	CCNGG	4 cut(s)	226, 276, 516, 1655
MunI	CAATTG	3 cut(s)	754, 1628, 2001
Mva1269I	GAATGC	1 cut(s)	511
MvaI	CCWGG	3 cut(s)	226, 516, 1655
MwoI	GCNNNNNNNGC	6 cut(s)	62, 84, 289, 309, 1394, 1498
NciI	CCSGG	1 cut(s)	276
NdeII	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
NheI	GCTAGC	2 cut(s)	4, 650
NlaIV	GGNNCC	3 cut(s)	293, 421, 1457
NmuCI	GTSAC	4 cut(s)	202, 1642, 1826, 2156
NsiI	ATGCAT	2 cut(s)	768, 1812
NspI	RCATGY	2 cut(s)	91, 745
NspV	TTCGAA	1 cut(s)	1782
PagI	TCATGA	1 cut(s)	1470
PctI	GAATGC	1 cut(s)	511
PdmI	GAANNNNTTC	1 cut(s)	1046
PfeI	GAWTC	2 cut(s)	1067, 2071
PflMI	CCANNNNNTGG	2 cut(s)	1327, 2104
PkrI	GCNGC	8 cut(s)	55, 77, 1396, 1399, 1503, 1747, 1835, 2265
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
PpuMI	RGGWCCY	2 cut(s)	1456, 2239
PshAI	GACNNNNGTC	2 cut(s)	962, 1649
Psp1406I	AACGTT	1 cut(s)	1419
Psp5II	RGGWCCY	2 cut(s)	1456, 2239
Psp6I	CCWGG	3 cut(s)	224, 514, 1653
PspEI	GGTNACC	2 cut(s)	748, 1826
PspFI	CCCAGC	1 cut(s)	1429
PspGI	CCWGG	3 cut(s)	224, 514, 1653
PspN4I	GGNNCC	3 cut(s)	293, 421, 1457
PspPI	GGNCC	6 cut(s)	291, 480, 522, 1266, 1456, 2239
PspPPI	RGGWCCY	2 cut(s)	1456, 2239
PsuI	RGATCY	1 cut(s)	1017
RsaI	GTAC	2 cut(s)	223, 1713
RsaNI	GTAC	2 cut(s)	222, 1712
RseI	CAYNNNNRTG	4 cut(s)	988, 1083, 1220, 1673
SatI	GCNGC	8 cut(s)	54, 76, 1395, 1398, 1502, 1746, 1834, 2264
Sau3AI	GATC	8 cut(s)	18, 409, 783, 1017, 1314, 1473, 1950, 2115
Sau96I	GGNCC	6 cut(s)	291, 480, 522, 1266, 1456, 2239
ScaI	AGTACT	1 cut(s)	1713
SchI	GAGTC	1 cut(s)	221
ScrFI	CCNGG	4 cut(s)	226, 276, 516, 1655
SduI	GDGCHC	2 cut(s)	314, 1157
SexAI	ACCWGGT	1 cut(s)	224
SfaNI	GCATC	5 cut(s)	1034, 1117, 1276, 1819, 2095
SfcI	CTRYAG	1 cut(s)	1884
SfuI	TTCGAA	1 cut(s)	1782
SinI	GGWCC	4 cut(s)	522, 1266, 1456, 2239
SmiMI	CAYNNNNRTG	4 cut(s)	988, 1083, 1220, 1673
SmlI	CTYRAG	3 cut(s)	1013, 1462, 2111
SmoI	CTYRAG	3 cut(s)	1013, 1462, 2111
SpeI	ACTAGT	2 cut(s)	1295, 1646
StyD4I	CCNGG	4 cut(s)	224, 274, 514, 1653
TaaI	ACNGT	4 cut(s)	661, 894, 1139, 1888
TaiI	ACGT	4 cut(s)	152, 1422, 1515, 1824
TaqI	TCGA	4 cut(s)	786, 1476, 1782, 2118
TatI	WGTACW	1 cut(s)	1711
TauI	GCSGC	3 cut(s)	56, 78, 1504
TfiI	GAWTC	2 cut(s)	1067, 2071
TscAI	CASTG	6 cut(s)	214, 252, 742, 1381, 2025, 2290
TseFI	GTSAC	4 cut(s)	202, 1642, 1826, 2156
TseI	GCWGC	5 cut(s)	1394, 1397, 1745, 1833, 2263
Tsp45I	GTSAC	4 cut(s)	202, 1642, 1826, 2156
TspRI	CASTG	6 cut(s)	214, 252, 742, 1381, 2025, 2290
Van91I	CCANNNNNTGG	2 cut(s)	1327, 2104
Vha464I	CTTAAG	1 cut(s)	1013
VpaK11BI	GGWCC	4 cut(s)	522, 1266, 1456, 2239
XapI	RAATTY	1 cut(s)	1059
XceI	RCATGY	2 cut(s)	91, 745
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1276
XmiI	GTMKAC	2 cut(s)	1569, 1917
XmnI	GAANNNNTTC	1 cut(s)	1046
ZrmI	AGTACT	1 cut(s)	1713
Zsp2I	ATGCAT	2 cut(s)	768, 1812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.