Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG063600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGAATAGAACCAGGTTTTTCAAAGATGGTTCCCCCCCCCACCTTTCCAAAAAAACAAAAAAAATATGGTTCCTCCCACATGAATATGCTATCCTTAATTTTTTAGTGGCTCAGCGACGCAGAAAAAAGCAAATGAAAAACTCTTCCAACATTTCGGAACCACCTCGAAATGGAAGTCAACTTGTATTGATCATGCAAAGCGAAGAGGGAAATGAAGCAGCAGACGGTTCTTCTTCAGCTCCAAAGCAAAGCTCAATGGAGTCTCCCAACGGATTGCCAGCTGAAATTTCCAATGAGACTCAAACTACCAGAAAGTCATTCAATCGGTCACTTATCTCCAAACCCAAGTCCAGAAAGTCGTTCAACAGGTCAGTTCTCTCCAAGCCCAAATCCAGATTTGGGGAACCGTCAGTGCCCATTGACTCTGATTTGTTTGAAGAGAGCAATAGTGTGGAAAATTCACCTCCTAATAGTAATATGGGTTCATTCAATAGGGCCAATAATAATTCCCCTGATTTTAGAACTGTCTCCATCAGCTCTGCATGGAACCCAGTAATGGCGTCTCCAGGCAGGGCCAAAGCCAAAGAGGAGGACGAAAAGTTTTACAAGGTGATCAGGGTATTGATTGAGTGGACTGTTTTCTTGTGCATTTTGGGTGTTTTAGTGGCTAGCTTGACTGTCGAGAAACTCGAGAAGCTTAAGGTTTGGGGGTTGGAGTTTTGGAAATGGTGTGTGCTTCTGATGGTAGTATTCGGTGGCACGCTGCTCACATATTGGTTCACGCATTTCATAGTCCTTTTCACCAAGAGGAACATACTGCTCAGGAAAAAGCTATTGTACTATGTTTATGGAGTGAAGAAGAGTGTTCAGGTTTTCATGTGGTTGGCTTTGGTTCTTCTAACGTGGTTACTATTGTTCAATCCTAGTCGTCATGAGATTAATCGATCAAAGACTCGTACCAAGGTTTTGAAATATGTTACCTGGACTCTTGCTTCGGCTGTTATTGGGGCATTTCTGTGGTTGTTGAAAACTCTGTTGTTTAAGATCGTAGCACTTAAGTTCCATCTGCGCCACACCTACTTTGATAGAGTTCAAGAGTCGATCTTCCATCAGTACATTCTTCAGACACTTTCAGGGCATCCAGTTATAGAGGAAGCCAAGAGGATCGGGAGATCACCGAGCACTGGCCAACTGAGTTTCCTAAGCACCAGGAAGGTCATTGATGTGGGAAAGCTTCAAAAGATGAAGCAGGTTTCAGCTTCTACCATGGAGGTGTTGGTGGATGCACTTTCAAGTTCAGCAGGACTATCCACTTTCTCTTATACGTTGGATCGAGACAGAGGACTTAAACAGAAAGAAATGCAGATTGTCAATGAGATTCAAGCAATTGCTGCTGCCTCCCATATTTTTACCAATGTTGCTCAGCGTGATTACGAGTACATTGAGGAGGACGACCTCAGGAGGTTCATGATTAATGAAGACGTGGAACTTGTGTTTCGATTGATTGATGTCGGAGAGACGGGAAAAATTGACAAAAGAGCTCTAACAGATTGGGTGGTCAAGGTCTACAATGGTCGCAAAGCATTAGATCATGCTCTAACCGACACCAAAGCAGCTGTAAAGCAATTGAACGAAATTGTGACCGGCATCCTGATTGTTATTATCATTGTTGTGTGGCTTATATTAATGGAAGTTGCTACCACGAAAGTACTTGTTTTCATCTCATCACAGCTCGTATTAGCAGCCTTTATCTTTGGAAACACTTGCAAGAACATATTTGAAGCCATCGTATTTGTCTTTGTAATGCATCCATTTGATGTTGGTGATCGCTGTCTTGTTGATGGTGTTCCGCTGAGGGTTGAGGAGATGAACATCCTTACTACAGTTTTCTTGAAACTAAATAATGAGAGGGTATATTATCCAAACTCAGTTTTATCAACAAAGACCATTAGCAATTATTATAGAAGTTCAGACATGGGAGATACCGTGGATTTCTCAATCGATTTAATTCCAGTTGACAGGATTAACCTGCTGAAAGCAAAAATAAAGAGTTATTTGGAGAGTAACCCGCAGTATTGGCACCCAGATCACAATGTGGTGGTGATTGAGATTGAAAATGTGAATAAGTTAAAGATGGCACTCTATTTTAATCACACTATGAACTTTCAAGAATTTAGGGAAATAAACAAGCGGAGATCTGAGCTGGTGATTGAATTGATGAGAATATTTGAAGAGCTCAACATCGCATACAATCTGCTTCCTCACGATGTCAGCGTGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

760

Amino Acids

87.2

Weight (kDa)

9.47

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Msy1	PF25886	200 - 354	1.3e-06	Mechanosensitive ion channel protein Msy1-like, transmembrane domain
MS_channel_2nd	PF00924	589 - 654	6.2e-09	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1240, 2037
AccB1I	GGYRCC	1 cut(s)	2079
AccI	GTMKAC	1 cut(s)	1566
AciI	CCGC	3 cut(s)	1850, 2069, 2191
AclWI	GGATC	2 cut(s)	1172, 1338
AcoI	YGGCCR	1 cut(s)	1186
AcsI	RAATTY	3 cut(s)	285, 457, 2171
AcuI	CTGAAG	2 cut(s)	219, 1106
AcyI	GRCGYC	1 cut(s)	560
AdeI	CACNNNGTG	1 cut(s)	2095
AfaI	GTAC	5 cut(s)	839, 958, 1115, 1439, 1710
AfiI	CCNNNNNNNGG	4 cut(s)	170, 399, 556, 1184
AflII	CTTAAG	2 cut(s)	698, 1055
AjiI	CACGTC	1 cut(s)	1483
AjnI	CCWGG	4 cut(s)	11, 565, 980, 1208
Alw21I	GWGCWC	3 cut(s)	1184, 1543, 2238
Alw26I	GTCTC	6 cut(s)	267, 290, 532, 567, 1329, 1511
AlwI	GGATC	2 cut(s)	1172, 1338
Ama87I	CYCGRG	1 cut(s)	689
AoxI	GGCC	4 cut(s)	495, 573, 1186, 2277
ApeKI	GCWGC	6 cut(s)	218, 763, 1391, 1394, 1613, 1742
ApoI	RAATTY	3 cut(s)	285, 457, 2171
ArsI	GACNNNNNNTTYG	4 cut(s)	160, 192, 976, 1008
AseI	ATTAAT	3 cut(s)	939, 1473, 1685
AspLEI	GCGC	1 cut(s)	1071
AspS9I	GGNCC	2 cut(s)	495, 573
AsuHPI	GGTGA	7 cut(s)	453, 622, 793, 1167, 1835, 2113, 2218
AsuNHI	GCTAGC	1 cut(s)	668
AvaI	CYCGRG	1 cut(s)	689
AxyI	CCTNAGG	1 cut(s)	1457
BaeGI	GKGCMC	1 cut(s)	417
BalI	TGGCCA	1 cut(s)	1188
BanI	GGYRCC	1 cut(s)	2079
BanII	GRGCYC	2 cut(s)	1543, 2238
BbsI	GAAGAC	1 cut(s)	1485
Bbv12I	GWGCWC	3 cut(s)	1184, 1543, 2238
BbvCI	CCTCAGC	1 cut(s)	1853
BbvI	GCAGC	6 cut(s)	230, 750, 1378, 1381, 1625, 1754
BccI	CCATC	8 cut(s)	20, 539, 736, 1071, 1116, 1793, 1835, 2128
BciT130I	CCWGG	4 cut(s)	13, 567, 982, 1210
BclI	TGATCA	2 cut(s)	189, 612
BcoDI	GTCTC	6 cut(s)	267, 290, 532, 567, 1329, 1511
BfaI	CTAG	2 cut(s)	669, 924
BfmI	CTRYAG	1 cut(s)	1881
BfrI	CTTAAG	2 cut(s)	698, 1055
BfuAI	ACCTGC	2 cut(s)	1240, 2037
BglII	AGATCT	1 cut(s)	2195
BisI	GCNGC	6 cut(s)	219, 764, 1392, 1395, 1614, 1743
BlpI	GCTNAGC	2 cut(s)	111, 1422
BlsI	GCNGC	6 cut(s)	220, 765, 1393, 1396, 1615, 1744
BmcAI	AGTACT	1 cut(s)	1710
Bme1390I	CCNGG	4 cut(s)	13, 567, 982, 1210
BmeT110I	CYCGRG	1 cut(s)	689
BmgBI	CACGTC	1 cut(s)	1483
BmgT120I	GGNCC	2 cut(s)	495, 573
BmiI	GGNNCC	6 cut(s)	31, 71, 159, 405, 548, 2081
BmrFI	CCNGG	4 cut(s)	13, 567, 982, 1210
BmrI	ACTGGG	1 cut(s)	545
BmsI	GCATC	4 cut(s)	1147, 1273, 1656, 1816
BmtI	GCTAGC	1 cut(s)	672
BmuI	ACTGGG	1 cut(s)	545
BpiI	GAAGAC	1 cut(s)	1485
BpmI	CTGGAG	1 cut(s)	549
Bpu10I	CCTNAGC	3 cut(s)	821, 1202, 1853
Bpu1102I	GCTNAGC	2 cut(s)	111, 1422
Bsa29I	ATCGAT	2 cut(s)	943, 2001
BsaBI	GATNNNNATC	1 cut(s)	1871
BsaHI	GRCGYC	1 cut(s)	560
BsaJI	CCNNGG	3 cut(s)	960, 1266, 1986
BsaXI	ACNNNNNCTCC	2 cut(s)	1971, 2001
Bsc4I	CCNNNNNNNGG	4 cut(s)	170, 399, 556, 1184
Bse118I	RCCGGY	1 cut(s)	1643
Bse1I	ACTGG	4 cut(s)	551, 1142, 1189, 2012
Bse21I	CCTNAGG	1 cut(s)	1457
Bse8I	GATNNNNATC	1 cut(s)	1871
BseBI	CCWGG	4 cut(s)	13, 567, 982, 1210
BseCI	ATCGAT	2 cut(s)	943, 2001
BseDI	CCNNGG	3 cut(s)	960, 1266, 1986
BseGI	GGATG	5 cut(s)	1138, 1288, 1647, 1807, 1872
BseJI	GATNNNNATC	1 cut(s)	1871
BseLI	CCNNNNNNNGG	4 cut(s)	170, 399, 556, 1184
BseMII	CTCAG	8 cut(s)	125, 835, 1184, 1436, 1471, 1844, 1941, 2190
BseNI	ACTGG	4 cut(s)	551, 1142, 1189, 2012
BseRI	GAGGAG	3 cut(s)	602, 1460, 1877
BseSI	GKGCMC	1 cut(s)	417
BseXI	GCAGC	6 cut(s)	230, 750, 1378, 1381, 1625, 1754
BshFI	GGCC	4 cut(s)	497, 575, 1188, 2279
BshNI	GGYRCC	1 cut(s)	2079
BshVI	ATCGAT	2 cut(s)	943, 2001
BsiHKAI	GWGCWC	3 cut(s)	1184, 1543, 2238
BsiHKCI	CYCGRG	1 cut(s)	689
BsiSI	CCGG	1 cut(s)	1644
BslI	CCNNNNNNNGG	4 cut(s)	170, 399, 556, 1184
BsmAI	GTCTC	6 cut(s)	267, 290, 532, 567, 1329, 1511
BsmBI	CGTCTC	2 cut(s)	567, 1511
BsnI	GGCC	4 cut(s)	497, 575, 1188, 2279
BsoBI	CYCGRG	1 cut(s)	689
Bsp1286I	GDGCHC	4 cut(s)	417, 1184, 1543, 2238
Bsp1720I	GCTNAGC	2 cut(s)	111, 1422
Bsp19I	CCATGG	1 cut(s)	1266
BspACI	CCGC	3 cut(s)	1850, 2069, 2191
BspANI	GGCC	4 cut(s)	497, 575, 1188, 2279
BspCNI	CTCAG	8 cut(s)	124, 834, 1185, 1435, 1470, 1845, 1940, 2191
BspDI	ATCGAT	2 cut(s)	943, 2001
BspHI	TCATGA	2 cut(s)	931, 1467
BspLI	GGNNCC	6 cut(s)	31, 71, 159, 405, 548, 2081
BspMI	ACCTGC	2 cut(s)	1240, 2037
BspOI	GCTAGC	1 cut(s)	672
BspPI	GGATC	2 cut(s)	1172, 1338
BspQI	GCTCTTC	1 cut(s)	2226
BspT107I	GGYRCC	1 cut(s)	2079
BspTI	CTTAAG	2 cut(s)	698, 1055
BsrFI	RCCGGY	1 cut(s)	1643
BsrI	ACTGG	4 cut(s)	551, 1142, 1189, 2012
BssAI	RCCGGY	1 cut(s)	1643
BssECI	CCNNGG	3 cut(s)	960, 1266, 1986
BssNI	GRCGYC	1 cut(s)	560
BssT1I	CCWWGG	2 cut(s)	960, 1266
Bst2UI	CCWGG	4 cut(s)	13, 567, 982, 1210
Bst4CI	ACNGT	7 cut(s)	227, 408, 526, 637, 679, 1885, 1987
Bst6I	CTCTTC	5 cut(s)	148, 198, 432, 854, 2226
BstACI	GRCGYC	1 cut(s)	560
BstAFI	CTTAAG	2 cut(s)	698, 1055
BstAPI	GCANNNNNTGC	1 cut(s)	1391
BstC8I	GCNNGC	3 cut(s)	279, 670, 761
BstDEI	CTNAG	9 cut(s)	111, 821, 1193, 1202, 1422, 1457, 1853, 1927, 2199
BstDSI	CCRYGG	2 cut(s)	1266, 1986
BstF5I	GGATG	5 cut(s)	1138, 1288, 1647, 1807, 1872
BstHHI	GCGC	1 cut(s)	1071
BstMAI	GTCTC	6 cut(s)	267, 290, 532, 567, 1329, 1511
BstMWI	GCNNNNNNNGC	2 cut(s)	1391, 2077
BstNI	CCWGG	4 cut(s)	13, 567, 982, 1210
BstSCI	CCNGG	4 cut(s)	11, 565, 980, 1208
BstSFI	CTRYAG	1 cut(s)	1881
BstSLI	GKGCMC	1 cut(s)	417
BstV1I	GCAGC	6 cut(s)	230, 750, 1378, 1381, 1625, 1754
BstV2I	GAAGAC	1 cut(s)	1485
BstX2I	RGATCY	1 cut(s)	2195
BstYI	RGATCY	1 cut(s)	2195
Bsu15I	ATCGAT	2 cut(s)	943, 2001
Bsu36I	CCTNAGG	1 cut(s)	1457
BsuRI	GGCC	4 cut(s)	497, 575, 1188, 2279
BsuTUI	ATCGAT	2 cut(s)	943, 2001
BtgI	CCRYGG	2 cut(s)	1266, 1986
BtgZI	GCGATG	1 cut(s)	2227
BtrI	CACGTC	1 cut(s)	1483
BtsCI	GGATG	5 cut(s)	1138, 1288, 1647, 1807, 1872
BtsIMutI	CAGTG	2 cut(s)	417, 1182
BveI	ACCTGC	2 cut(s)	1240, 2037
Cac8I	GCNNGC	3 cut(s)	279, 670, 761
CciI	TCATGA	2 cut(s)	931, 1467
CfoI	GCGC	1 cut(s)	1071
Cfr10I	RCCGGY	1 cut(s)	1643
Cfr13I	GGNCC	2 cut(s)	495, 573
ClaI	ATCGAT	2 cut(s)	943, 2001
CseI	GACGC	2 cut(s)	126, 549
CsiI	ACCWGGT	1 cut(s)	11
Csp6I	GTAC	5 cut(s)	838, 957, 1114, 1438, 1709
CviAII	CATG	9 cut(s)	80, 193, 543, 877, 932, 1267, 1468, 1592, 1975
CviQI	GTAC	5 cut(s)	838, 957, 1114, 1438, 1709
DdeI	CTNAG	9 cut(s)	111, 821, 1193, 1202, 1422, 1457, 1853, 1927, 2199
DraIII	CACNNNGTG	1 cut(s)	2095
EaeI	YGGCCR	1 cut(s)	1186
Eam1104I	CTCTTC	5 cut(s)	148, 198, 432, 854, 2226
EarI	CTCTTC	5 cut(s)	148, 198, 432, 854, 2226
Ecl136II	GAGCTC	2 cut(s)	1541, 2236
Eco130I	CCWWGG	2 cut(s)	960, 1266
Eco24I	GRGCYC	2 cut(s)	1543, 2238
Eco53kI	GAGCTC	2 cut(s)	1541, 2236
Eco57I	CTGAAG	2 cut(s)	219, 1106
Eco81I	CCTNAGG	1 cut(s)	1457
Eco88I	CYCGRG	1 cut(s)	689
EcoICRI	GAGCTC	2 cut(s)	1541, 2236
EcoRII	CCWGG	4 cut(s)	11, 565, 980, 1208
EcoT14I	CCWWGG	2 cut(s)	960, 1266
EcoT22I	ATGCAT	1 cut(s)	1809
EcoT38I	GRGCYC	2 cut(s)	1543, 2238
ErhI	CCWWGG	2 cut(s)	960, 1266
Esp3I	CGTCTC	2 cut(s)	567, 1511
FaeI	CATG	9 cut(s)	83, 196, 546, 880, 935, 1270, 1471, 1595, 1978
FatI	CATG	9 cut(s)	79, 192, 542, 876, 931, 1266, 1467, 1591, 1974
FauI	CCCGC	1 cut(s)	2076
FbaI	TGATCA	2 cut(s)	189, 612
FblI	GTMKAC	1 cut(s)	1566
Fnu4HI	GCNGC	6 cut(s)	219, 764, 1392, 1395, 1614, 1743
FokI	GGATG	5 cut(s)	1125, 1295, 1634, 1794, 1859
FriOI	GRGCYC	2 cut(s)	1543, 2238
Fsp4HI	GCNGC	6 cut(s)	219, 764, 1392, 1395, 1614, 1743
FspBI	CTAG	2 cut(s)	669, 924
GlaI	GCGC	1 cut(s)	1070
GluI	GCNGC	6 cut(s)	219, 764, 1392, 1395, 1614, 1743
GsuI	CTGGAG	1 cut(s)	549
HaeIII	GGCC	4 cut(s)	497, 575, 1188, 2279
HapII	CCGG	1 cut(s)	1644
HgaI	GACGC	2 cut(s)	126, 549
HhaI	GCGC	1 cut(s)	1071
Hin1I	GRCGYC	1 cut(s)	560
Hin1II	CATG	9 cut(s)	83, 196, 546, 880, 935, 1270, 1471, 1595, 1978
Hin6I	GCGC	1 cut(s)	1069
HinP1I	GCGC	1 cut(s)	1069
HincII	GTYRAC	2 cut(s)	179, 2017
HindII	GTYRAC	2 cut(s)	179, 2017
HindIII	AAGCTT	2 cut(s)	695, 1232
HinfI	GANTC	7 cut(s)	260, 298, 422, 952, 985, 1097, 1378
HpaII	CCGG	1 cut(s)	1644
HphI	GGTGA	7 cut(s)	453, 622, 793, 1167, 1835, 2113, 2218
Hpy166II	GTNNAC	5 cut(s)	179, 633, 780, 1567, 2017
Hpy188I	TCNGA	7 cut(s)	157, 427, 741, 1125, 1514, 1972, 2200
Hpy8I	GTNNAC	5 cut(s)	179, 633, 780, 1567, 2017
Hpy99I	CGWCG	1 cut(s)	120
HpyAV	CCTTC	1 cut(s)	1207
HpyCH4III	ACNGT	7 cut(s)	227, 408, 526, 637, 679, 1885, 1987
HpyCH4IV	ACGT	3 cut(s)	902, 1325, 1482
HpyCH4V	TGCA	7 cut(s)	196, 542, 648, 1286, 1363, 1767, 1807
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1391, 2077
HpyF3I	CTNAG	9 cut(s)	111, 821, 1193, 1202, 1422, 1457, 1853, 1927, 2199
HpySE526I	ACGT	3 cut(s)	902, 1325, 1482
Hsp92I	GRCGYC	1 cut(s)	560
Hsp92II	CATG	9 cut(s)	83, 196, 546, 880, 935, 1270, 1471, 1595, 1978
HspAI	GCGC	1 cut(s)	1069
Ksp22I	TGATCA	2 cut(s)	189, 612
LguI	GCTCTTC	1 cut(s)	2226
LmnI	GCTCC	1 cut(s)	244
Lsp1109I	GCAGC	6 cut(s)	230, 750, 1378, 1381, 1625, 1754
LweI	GCATC	4 cut(s)	1147, 1273, 1656, 1816
MabI	ACCWGGT	1 cut(s)	11
MaeI	CTAG	2 cut(s)	669, 924
MaeII	ACGT	3 cut(s)	902, 1325, 1482
MaeIII	GTNAC	5 cut(s)	327, 906, 976, 1639, 2063
MfeI	CAATTG	2 cut(s)	1386, 1625
MflI	RGATCY	1 cut(s)	2195
MhlI	GDGCHC	4 cut(s)	417, 1184, 1543, 2238
MlsI	TGGCCA	1 cut(s)	1188
MluNI	TGGCCA	1 cut(s)	1188
MlyI	GAGTC	6 cut(s)	269, 292, 416, 946, 979, 1106
MmeI	TCCRAC	4 cut(s)	171, 693, 1308, 1492
Mox20I	TGGCCA	1 cut(s)	1188
Mph1103I	ATGCAT	1 cut(s)	1809
MscI	TGGCCA	1 cut(s)	1188
MslI	CAYNNNNRTG	5 cut(s)	84, 1015, 1223, 1271, 1670
Msp20I	TGGCCA	1 cut(s)	1188
MspA1I	CMGCKG	3 cut(s)	281, 1616, 1852
MspCI	CTTAAG	2 cut(s)	698, 1055
MspI	CCGG	1 cut(s)	1644
MspR9I	CCNGG	4 cut(s)	13, 567, 982, 1210
MunI	CAATTG	2 cut(s)	1386, 1625
MvaI	CCWGG	4 cut(s)	13, 567, 982, 1210
MwoI	GCNNNNNNNGC	2 cut(s)	1391, 2077
NcoI	CCATGG	1 cut(s)	1266
NheI	GCTAGC	1 cut(s)	668
NlaIII	CATG	9 cut(s)	83, 196, 546, 880, 935, 1270, 1471, 1595, 1978
NlaIV	GGNNCC	6 cut(s)	31, 71, 159, 405, 548, 2081
NmuCI	GTSAC	2 cut(s)	327, 1639
NsiI	ATGCAT	1 cut(s)	1809
PaeR7I	CTCGAG	1 cut(s)	689
PagI	TCATGA	2 cut(s)	931, 1467
PciSI	GCTCTTC	1 cut(s)	2226
PcsI	WCGNNNNNNNCGW	2 cut(s)	687, 2271
PfeI	GAWTC	1 cut(s)	1378
PkrI	GCNGC	6 cut(s)	220, 765, 1393, 1396, 1615, 1744
PleI	GAGTC	6 cut(s)	268, 292, 416, 946, 979, 1105
PpsI	GAGTC	6 cut(s)	268, 292, 416, 946, 979, 1105
PshBI	ATTAAT	3 cut(s)	939, 1473, 1685
Psp124BI	GAGCTC	2 cut(s)	1543, 2238
Psp6I	CCWGG	4 cut(s)	11, 565, 980, 1208
PspGI	CCWGG	4 cut(s)	11, 565, 980, 1208
PspN4I	GGNNCC	6 cut(s)	31, 71, 159, 405, 548, 2081
PspPI	GGNCC	2 cut(s)	495, 573
PsrI	GAACNNNNNNTAC	2 cut(s)	466, 498
PsuI	RGATCY	1 cut(s)	2195
PvuII	CAGCTG	2 cut(s)	281, 1616
RsaI	GTAC	5 cut(s)	839, 958, 1115, 1439, 1710
RsaNI	GTAC	5 cut(s)	838, 957, 1114, 1438, 1709
RseI	CAYNNNNRTG	5 cut(s)	84, 1015, 1223, 1271, 1670
SacI	GAGCTC	2 cut(s)	1543, 2238
SapI	GCTCTTC	1 cut(s)	2226
SatI	GCNGC	6 cut(s)	219, 764, 1392, 1395, 1614, 1743
Sau96I	GGNCC	2 cut(s)	495, 573
ScaI	AGTACT	1 cut(s)	1710
SchI	GAGTC	6 cut(s)	269, 292, 416, 946, 979, 1106
ScrFI	CCNGG	4 cut(s)	13, 567, 982, 1210
SduI	GDGCHC	4 cut(s)	417, 1184, 1543, 2238
SexAI	ACCWGGT	1 cut(s)	11
SfaNI	GCATC	4 cut(s)	1147, 1273, 1656, 1816
SfcI	CTRYAG	1 cut(s)	1881
Sfr274I	CTCGAG	1 cut(s)	689
SlaI	CTCGAG	1 cut(s)	689
SmiMI	CAYNNNNRTG	5 cut(s)	84, 1015, 1223, 1271, 1670
SmlI	CTYRAG	3 cut(s)	689, 698, 1055
SmoI	CTYRAG	3 cut(s)	689, 698, 1055
SsiI	CCGC	3 cut(s)	1850, 2069, 2191
SspI	AATATT	1 cut(s)	2226
SspMI	CTAG	2 cut(s)	669, 924
SstI	GAGCTC	2 cut(s)	1543, 2238
StyD4I	CCNGG	4 cut(s)	11, 565, 980, 1208
StyI	CCWWGG	2 cut(s)	960, 1266
TaaI	ACNGT	7 cut(s)	227, 408, 526, 637, 679, 1885, 1987
TaiI	ACGT	3 cut(s)	905, 1328, 1485
TaqI	TCGA	8 cut(s)	166, 681, 690, 943, 1100, 1333, 1498, 2001
TaqII	GACCGA	1 cut(s)	315
TatI	WGTACW	4 cut(s)	837, 1113, 1437, 1708
TfiI	GAWTC	1 cut(s)	1378
TscAI	CASTG	2 cut(s)	417, 1189
TseFI	GTSAC	2 cut(s)	327, 1639
TseI	GCWGC	6 cut(s)	218, 763, 1391, 1394, 1613, 1742
Tsp45I	GTSAC	2 cut(s)	327, 1639
TspGWI	ACGGA	1 cut(s)	285
TspRI	CASTG	2 cut(s)	417, 1189
Vha464I	CTTAAG	2 cut(s)	698, 1055
VspI	ATTAAT	3 cut(s)	939, 1473, 1685
XapI	RAATTY	3 cut(s)	285, 457, 2171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1273
XhoI	CTCGAG	1 cut(s)	689
XmiI	GTMKAC	1 cut(s)	1566
XspI	CTAG	2 cut(s)	669, 924
ZrmI	AGTACT	1 cut(s)	1710
Zsp2I	ATGCAT	1 cut(s)	1809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.