Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0018059.1

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Reverse (-)

9975 .. 14137

Gene Structure 4163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0018059.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3285 bp

atgcaagctttccttcgcttattaagtgacaggttcttgatggaagccgcagagaaaggcttaaaaggaagcagagtaagcatgtcaaaaaatcgatctgggaatgatggaggtgatgaagttgtagtggtggttcaaagcgaagagatggaagaagggtcttgttcgaaaggcttagaatcttcagctcccaatcaaattagcaaagtgaaattgcaggttggctctcattcccctgagattacaggatccagcaacgcccccatccccaatgagaccctcactaggagaaagtcatctattagtcttggtcaacagtcgatgcgcattgattctgatattcttgaagaggacactaatttagagcaggatggttcccccgcaaataaatcagcatataaagaggaggaggaggaggaggaggagatttacgagaaggttaactctagcaggaaagtgaacaagaaaatgctgatggagtatattgttttcgcgtgcagtttgggtgttatagtagctagctttactgtcgagaaactagagaatcttaaggtgtggggattggagatgtggaaattgtgtgtgcttgttatgctcatattctgtggaatgctggttacgaattgtgttttgactctgttagtttttgtgattgagagcaactttctgtttacgaggaagaaggaggtgttgtatttggtttatggaatgaaaaagagtgttcaggttttcctgtggttcgggatggtgcttctcacatggctattctttttcaaattcaatcgtggcaatgagagatcaaagacttccaccaagattttggatcatattacgtggactcttgtttcgctgcttattggtgcctttttgtggatgttatcaactttgttgtttaagaccttagcatctaaattcatggccgtcgcctattttgataggattcaagaatctttgttccatcagtacgttattgagacactttcggggcctccgttagtagaggaggatgccaagattaggagatcactcagcacagggtttgtgagtctcaggtcgataaacaatgtggaaaagaaggtcactggtaaggtgaatcctgcaaggaaggtttcagttgagaccatggatacgttggtgggtgcagtttctactagagatacagagattacaagtgagtgggaagccaaagctgcttccttcaaaatatttcgaaacgttgctcagcatggtaacaagtacatcgaggaggaggacctcatgaggttcatgactcgggcagaggtgggtagtgtatttccactgtttgacggagcaatggaaaccggcaaaattaaaagaaaagatctacgtagctgggtgtggagaaatgagaatttgattaacttgagtttgcttctatttacaataattccttcatcttttaggaaccccatccccaatgagaccctcactaggagaaagtcatctattagtcttggtcaacagtcgatgcgcattgattctgatattgttgaagaggacactaatttagagcaggatggttcccccgcaaataaatcagcatataaagaagaggaggaggaggaggagatttacgagaaggttaactctagcaggaaagtgaacaagaaaatgctgatggagtatattgttttcgcgtgcagtttgggtgttatagtagctagctttactgtcgagaaactagagaatcttaaggtgtggggattggagatgtggaaattgtgtgtgcttgttatgctcatattctgtggaatgctggttacgaattgtgttttgactctgttagtttttgtgattgagagcaactttctgtttacgaggaagaaggaggtgttgtatttggtttatggaatgaaaaagagtgttcaggttttcctgtggttcgggatggtgcttctcacatggctattctttttcaaattcaatcgtggcaatgagagatcaaagacttccaccaagattttggatcatattacgtggactcttgtttcgctgcttattggtgcctttttgtggatgttatcaactttgttgtttaagaccttagcatctaaattcatggccgtcgcctattttgataggattcaagaatctttgttccatcagtacgttattgagacactttcggggcctccgttagtagaggaggatgccaagattaggagatcactcagcacagggtttgtgagtctcaggtcgataaacaatgtggaaaagaaggtcactggtaaggtgaatcctgcaaggaaggtttcagttgagaccatggatacgttggtgggtgcagtttctactagagatacagagattacaagtgagtgggaagccaaagctgcttccttcaaaatatttcgaaacgttgctcagcatggtaacaagtacatcgaggaggaggacctcatgaggttcatgactcgggcagaggtgggtagtgtatttccactgtttgacggagcaatggaaaccggcaaaattaaaagaaaagatctacgtagctgggtggtaaatgtctaccgagaacgcaaagcattagcttgttctatgactgacaccaaaacagttctaaagcaatttgagaaattttttactagcttggtgattgttattaccatcgtagtgtggctactgttggtgggaattgcaagtacaaacctagtggttttcctctcaacacagttcttattggcagcttttatttttggaaacacttgcaagaatgtatttgaagctatcgtgttcatgtttgtgacacatccatttgatgttggtgatcacattgttgttgatgatgttctgttgatggttgaagagatgaacgtcttaactaccaccttcttgaaaccaaataatgaaaaggtgtactatccaaattcaattttgtgcaccaaaatcatcagcaattattacagaagtccagatatgggagatacagtggaattctcaattattttgacaccagtggagaagatagacatgctgagaaagagaataaaggagtacttggagagcaaaccgcagcattggcgtccaggccacagtgtggtggtgattgatatcgaagatgtgaataagttaaagatggcactcaatatttgtcacactatgaactttcaagaaattggtgaaaggaataaacggcgaactgagctagtcatcgaattgatgagaactttggaagacctaaacatcacatacagtctgatgccccaagaagttcacctcactcaaaataaagcagatgcaaccgtttccttcaagagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

1094

Amino Acids

125.15

Weight (kDa)

8.0

Isoelectric Point (pI)

41.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	326, 1493
Acc36I	ACCTGC	1 cut(s)	208
AccB1I	GGYRCC	2 cut(s)	860, 2024
AccB7I	CCANNNNNTGG	1 cut(s)	3061
AccI	GTMKAC	1 cut(s)	2532
AccII	CGCG	2 cut(s)	494, 1658
AciI	CCGC	4 cut(s)	48, 381, 1548, 3035
AclI	AACGTT	2 cut(s)	1215, 2379
AclWI	GGATC	4 cut(s)	243, 256, 831, 1995
AcoI	YGGCCR	2 cut(s)	918, 2082
AcsI	RAATTY	8 cut(s)	776, 911, 1372, 1940, 2075, 2600, 2890, 2957
AcuI	CTGAAG	1 cut(s)	168
AcyI	GRCGYC	1 cut(s)	3046
AdeI	CACNNNGTG	1 cut(s)	3061
AfaI	GTAC	7 cut(s)	965, 1238, 2129, 2402, 2668, 2882, 3020
AfiI	CCNNNNNNNGG	8 cut(s)	285, 870, 1017, 1452, 2034, 2181, 2942, 3061
AflII	CTTAAG	2 cut(s)	548, 1712
AjnI	CCWGG	1 cut(s)	3049
Alw21I	GWGCWC	1 cut(s)	2906
Alw26I	GTCTC	8 cut(s)	269, 968, 1052, 1112, 1436, 2132, 2216, 2276
Alw44I	GTGCAC	1 cut(s)	2902
AlwI	GGATC	4 cut(s)	243, 256, 831, 1995
Ama87I	CYCGRG	2 cut(s)	1272, 2436
AoxI	GGCC	5 cut(s)	918, 986, 2082, 2150, 3052
ApaLI	GTGCAC	1 cut(s)	2902
ApeKI	GCWGC	6 cut(s)	850, 1190, 2014, 2354, 2708, 3037
ApoI	RAATTY	8 cut(s)	776, 911, 1372, 1940, 2075, 2600, 2890, 2957
ArsI	GACNNNNNNTTYG	4 cut(s)	829, 861, 1993, 2025
AspLEI	GCGC	2 cut(s)	327, 1494
AspS9I	GGNCC	4 cut(s)	986, 1252, 2150, 2416
AsuHPI	GGTGA	8 cut(s)	125, 1102, 2266, 2629, 2801, 3079, 3155, 3230
AsuII	TTCGAA	3 cut(s)	167, 1210, 2374
AsuNHI	GCTAGC	2 cut(s)	518, 1682
AvaI	CYCGRG	2 cut(s)	1272, 2436
AvaII	GGWCC	2 cut(s)	1252, 2416
BaeGI	GKGCMC	1 cut(s)	2906
BaeI	ACNNNNGTAYC	4 cut(s)	1119, 1152, 2283, 2316
BamHI	GGATCC	1 cut(s)	248
BanI	GGYRCC	2 cut(s)	860, 2024
BbsI	GAAGAC	1 cut(s)	3204
Bbv12I	GWGCWC	1 cut(s)	2906
BbvI	GCAGC	6 cut(s)	837, 1177, 2001, 2341, 2720, 3049
BceAI	ACGGC	3 cut(s)	905, 2069, 3173
BciT130I	CCWGG	1 cut(s)	3051
BciVI	GTATCC	2 cut(s)	1120, 2284
BclI	TGATCA	1 cut(s)	2791
BcoDI	GTCTC	8 cut(s)	269, 968, 1052, 1112, 1436, 2132, 2216, 2276
BfrI	CTTAAG	2 cut(s)	548, 1712
BfuAI	ACCTGC	1 cut(s)	208
BfuI	GTATCC	2 cut(s)	1120, 2284
BglII	AGATCT	2 cut(s)	1342, 2506
BisI	GCNGC	7 cut(s)	48, 851, 1191, 2015, 2355, 2709, 3038
BlpI	GCTNAGC	2 cut(s)	1221, 2385
BlsI	GCNGC	7 cut(s)	49, 852, 1192, 2016, 2356, 2710, 3039
BmcAI	AGTACT	1 cut(s)	3020
Bme1390I	CCNGG	1 cut(s)	3051
Bme18I	GGWCC	2 cut(s)	1252, 2416
BmeT110I	CYCGRG	2 cut(s)	1272, 2436
BmgT120I	GGNCC	4 cut(s)	986, 1252, 2150, 2416
BmiI	GGNNCC	8 cut(s)	250, 376, 862, 987, 1427, 1543, 2026, 2151
BmrFI	CCNGG	1 cut(s)	3051
BmsI	GCATC	8 cut(s)	312, 914, 997, 1479, 2078, 2161, 3213, 3250
BmtI	GCTAGC	2 cut(s)	522, 1686
BpiI	GAAGAC	1 cut(s)	3204
Bpu10I	CCTNAGC	2 cut(s)	901, 2065
Bpu1102I	GCTNAGC	2 cut(s)	1221, 2385
Bpu14I	TTCGAA	3 cut(s)	167, 1210, 2374
BpuEI	CTTGAG	1 cut(s)	1405
Bsa29I	ATCGAT	1 cut(s)	94
BsaAI	YACGTR	4 cut(s)	834, 1349, 1998, 2513
BsaBI	GATNNNNATC	1 cut(s)	3074
BsaHI	GRCGYC	1 cut(s)	3046
BsaI	GGTCTC	4 cut(s)	269, 1112, 1436, 2276
BsaJI	CCNNGG	2 cut(s)	1122, 2286
BsaXI	ACNNNNNCTCC	6 cut(s)	677, 707, 1841, 1871, 2937, 2967
Bsc4I	CCNNNNNNNGG	8 cut(s)	285, 870, 1017, 1452, 2034, 2181, 2942, 3061
Bse118I	RCCGGY	2 cut(s)	1322, 2486
Bse1I	ACTGG	3 cut(s)	1087, 2251, 2978
Bse3DI	GCAATG	4 cut(s)	796, 1320, 1960, 2484
Bse8I	GATNNNNATC	1 cut(s)	3074
BseBI	CCWGG	1 cut(s)	3051
BseCI	ATCGAT	1 cut(s)	94
BseDI	CCNNGG	2 cut(s)	1122, 2286
BseJI	GATNNNNATC	1 cut(s)	3074
BseLI	CCNNNNNNNGG	8 cut(s)	285, 870, 1017, 1452, 2034, 2181, 2942, 3061
BseMI	GCAATG	4 cut(s)	796, 1320, 1960, 2484
BseMII	CTCAG	9 cut(s)	228, 1042, 1063, 1235, 2206, 2227, 2399, 2990, 3156
BseNI	ACTGG	3 cut(s)	1087, 2251, 2978
BseSI	GKGCMC	1 cut(s)	2906
BseXI	GCAGC	6 cut(s)	837, 1177, 2001, 2341, 2720, 3049
BseYI	CCCAGC	2 cut(s)	1353, 2517
BsgI	GTGCAG	4 cut(s)	517, 1161, 1681, 2325
Bsh1236I	CGCG	2 cut(s)	494, 1658
BshFI	GGCC	5 cut(s)	920, 988, 2084, 2152, 3054
BshNI	GGYRCC	2 cut(s)	860, 2024
BshVI	ATCGAT	1 cut(s)	94
BsiHKAI	GWGCWC	1 cut(s)	2906
BsiHKCI	CYCGRG	2 cut(s)	1272, 2436
BsiSI	CCGG	2 cut(s)	1323, 2487
BslI	CCNNNNNNNGG	8 cut(s)	285, 870, 1017, 1452, 2034, 2181, 2942, 3061
BsmAI	GTCTC	8 cut(s)	269, 968, 1052, 1112, 1436, 2132, 2216, 2276
BsmI	GAATGC	2 cut(s)	615, 1779
BsnI	GGCC	5 cut(s)	920, 988, 2084, 2152, 3054
Bso31I	GGTCTC	4 cut(s)	269, 1112, 1436, 2276
BsoBI	CYCGRG	2 cut(s)	1272, 2436
Bsp119I	TTCGAA	3 cut(s)	167, 1210, 2374
Bsp1286I	GDGCHC	1 cut(s)	2906
Bsp1720I	GCTNAGC	2 cut(s)	1221, 2385
Bsp19I	CCATGG	2 cut(s)	1122, 2286
BspACI	CCGC	4 cut(s)	48, 381, 1548, 3035
BspANI	GGCC	5 cut(s)	920, 988, 2084, 2152, 3054
BspCNI	CTCAG	9 cut(s)	229, 1041, 1062, 1234, 2205, 2226, 2398, 2991, 3157
BspDI	ATCGAT	1 cut(s)	94
BspFNI	CGCG	2 cut(s)	494, 1658
BspHI	TCATGA	4 cut(s)	1257, 1266, 2421, 2430
BspLI	GGNNCC	8 cut(s)	250, 376, 862, 987, 1427, 1543, 2026, 2151
BspMI	ACCTGC	1 cut(s)	208
BspOI	GCTAGC	2 cut(s)	522, 1686
BspPI	GGATC	4 cut(s)	243, 256, 831, 1995
BspT104I	TTCGAA	3 cut(s)	167, 1210, 2374
BspT107I	GGYRCC	2 cut(s)	860, 2024
BspTI	CTTAAG	2 cut(s)	548, 1712
BspTNI	GGTCTC	4 cut(s)	269, 1112, 1436, 2276
BsrDI	GCAATG	4 cut(s)	796, 1320, 1960, 2484
BsrFI	RCCGGY	2 cut(s)	1322, 2486
BsrI	ACTGG	3 cut(s)	1087, 2251, 2978
BssAI	RCCGGY	2 cut(s)	1322, 2486
BssECI	CCNNGG	2 cut(s)	1122, 2286
BssNI	GRCGYC	1 cut(s)	3046
BssT1I	CCWWGG	2 cut(s)	1122, 2286
Bst2UI	CCWGG	1 cut(s)	3051
Bst6I	CTCTTC	5 cut(s)	138, 342, 1509, 1566, 2823
BstACI	GRCGYC	1 cut(s)	3046
BstAFI	CTTAAG	2 cut(s)	548, 1712
BstBAI	YACGTR	4 cut(s)	834, 1349, 1998, 2513
BstBI	TTCGAA	3 cut(s)	167, 1210, 2374
BstC8I	GCNNGC	5 cut(s)	6, 496, 520, 1660, 1684
BstDSI	CCRYGG	2 cut(s)	1122, 2286
BstFNI	CGCG	2 cut(s)	494, 1658
BstHHI	GCGC	2 cut(s)	327, 1494
BstMAI	GTCTC	8 cut(s)	269, 968, 1052, 1112, 1436, 2132, 2216, 2276
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 592, 1190, 1756, 2354, 3043, 3166
BstNI	CCWGG	1 cut(s)	3051
BstNSI	RCATGY	2 cut(s)	85, 2998
BstSCI	CCNGG	1 cut(s)	3049
BstSLI	GKGCMC	1 cut(s)	2906
BstSNI	TACGTA	2 cut(s)	1349, 2513
BstUI	CGCG	2 cut(s)	494, 1658
BstV1I	GCAGC	6 cut(s)	837, 1177, 2001, 2341, 2720, 3049
BstV2I	GAAGAC	1 cut(s)	3204
BstX2I	RGATCY	3 cut(s)	248, 1342, 2506
BstXI	CCANNNNNNTGG	2 cut(s)	820, 1984
BstYI	RGATCY	3 cut(s)	248, 1342, 2506
Bsu15I	ATCGAT	1 cut(s)	94
BsuI	GTATCC	2 cut(s)	1120, 2284
BsuRI	GGCC	5 cut(s)	920, 988, 2084, 2152, 3054
BsuTUI	ATCGAT	1 cut(s)	94
BtgI	CCRYGG	2 cut(s)	1122, 2286
BtsIMutI	CAGTG	7 cut(s)	1080, 1298, 2244, 2462, 2958, 2985, 3064
BveI	ACCTGC	1 cut(s)	208
Cac8I	GCNNGC	5 cut(s)	6, 496, 520, 1660, 1684
CciI	TCATGA	4 cut(s)	1257, 1266, 2421, 2430
CfoI	GCGC	2 cut(s)	327, 1494
Cfr10I	RCCGGY	2 cut(s)	1322, 2486
Cfr13I	GGNCC	4 cut(s)	986, 1252, 2150, 2416
ClaI	ATCGAT	1 cut(s)	94
CseI	GACGC	1 cut(s)	3035
Csp6I	GTAC	7 cut(s)	964, 1237, 2128, 2401, 2667, 2881, 3019
CspCI	CAANNNNNGTGG	2 cut(s)	2658, 2693
CviQI	GTAC	7 cut(s)	964, 1237, 2128, 2401, 2667, 2881, 3019
DraIII	CACNNNGTG	1 cut(s)	3061
EaeI	YGGCCR	2 cut(s)	918, 2082
Eam1104I	CTCTTC	5 cut(s)	138, 342, 1509, 1566, 2823
EarI	CTCTTC	5 cut(s)	138, 342, 1509, 1566, 2823
Eco105I	TACGTA	2 cut(s)	1349, 2513
Eco130I	CCWWGG	2 cut(s)	1122, 2286
Eco31I	GGTCTC	4 cut(s)	269, 1112, 1436, 2276
Eco32I	GATATC	1 cut(s)	3076
Eco47I	GGWCC	2 cut(s)	1252, 2416
Eco57I	CTGAAG	1 cut(s)	168
Eco88I	CYCGRG	2 cut(s)	1272, 2436
EcoO109I	RGGNCCY	4 cut(s)	986, 1252, 2150, 2416
EcoRI	GAATTC	1 cut(s)	2957
EcoRII	CCWGG	1 cut(s)	3049
EcoRV	GATATC	1 cut(s)	3076
EcoT14I	CCWWGG	2 cut(s)	1122, 2286
ErhI	CCWWGG	2 cut(s)	1122, 2286
FalI	AAGNNNNNCTT	3 cut(s)	29, 3005, 3037
FauI	CCCGC	2 cut(s)	388, 1555
FbaI	TGATCA	1 cut(s)	2791
FblI	GTMKAC	1 cut(s)	2532
Fnu4HI	GCNGC	7 cut(s)	48, 851, 1191, 2015, 2355, 2709, 3038
Fsp4HI	GCNGC	7 cut(s)	48, 851, 1191, 2015, 2355, 2709, 3038
FspAI	RTGCGCAY	2 cut(s)	326, 1493
FspI	TGCGCA	2 cut(s)	326, 1493
GlaI	GCGC	2 cut(s)	326, 1493
GluI	GCNGC	7 cut(s)	48, 851, 1191, 2015, 2355, 2709, 3038
GsaI	CCCAGC	2 cut(s)	1357, 2521
HaeIII	GGCC	5 cut(s)	920, 988, 2084, 2152, 3054
HapII	CCGG	2 cut(s)	1323, 2487
HgaI	GACGC	1 cut(s)	3035
HhaI	GCGC	2 cut(s)	327, 1494
Hin1I	GRCGYC	1 cut(s)	3046
Hin6I	GCGC	2 cut(s)	325, 1492
HinP1I	GCGC	2 cut(s)	325, 1492
HincII	GTYRAC	4 cut(s)	314, 442, 1481, 1606
HindII	GTYRAC	4 cut(s)	314, 442, 1481, 1606
HindIII	AAGCTT	1 cut(s)	6
HpaI	GTTAAC	2 cut(s)	442, 1606
HpaII	CCGG	2 cut(s)	1323, 2487
HphI	GGTGA	8 cut(s)	125, 1102, 2266, 2629, 2801, 3079, 3155, 3230
Hpy188I	TCNGA	3 cut(s)	337, 1504, 3222
Hpy99I	CGWCG	2 cut(s)	926, 2090
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 592, 1190, 1756, 2354, 3043, 3166
Hsp92I	GRCGYC	1 cut(s)	3046
HspAI	GCGC	2 cut(s)	325, 1492
Ksp22I	TGATCA	1 cut(s)	2791
KspAI	GTTAAC	2 cut(s)	442, 1606
LmnI	GCTCC	3 cut(s)	193, 1310, 2474
Lsp1109I	GCAGC	6 cut(s)	837, 1177, 2001, 2341, 2720, 3049
LweI	GCATC	8 cut(s)	312, 914, 997, 1479, 2078, 2161, 3213, 3250
MaeIII	GTNAC	9 cut(s)	26, 616, 1078, 1229, 1780, 2242, 2393, 2767, 3116
MflI	RGATCY	3 cut(s)	248, 1342, 2506
MhlI	GDGCHC	1 cut(s)	2906
MlyI	GAGTC	8 cut(s)	628, 832, 1054, 1264, 1792, 1996, 2218, 2428
MslI	CAYNNNNRTG	2 cut(s)	2636, 2765
MspCI	CTTAAG	2 cut(s)	548, 1712
MspI	CCGG	2 cut(s)	1323, 2487
MspR9I	CCNGG	1 cut(s)	3051
Mva1269I	GAATGC	2 cut(s)	615, 1779
MvaI	CCWGG	1 cut(s)	3051
MvnI	CGCG	2 cut(s)	494, 1658
MwoI	GCNNNNNNNGC	7 cut(s)	78, 592, 1190, 1756, 2354, 3043, 3166
NcoI	CCATGG	2 cut(s)	1122, 2286
NheI	GCTAGC	2 cut(s)	518, 1682
NlaIV	GGNNCC	8 cut(s)	250, 376, 862, 987, 1427, 1543, 2026, 2151
NmuCI	GTSAC	5 cut(s)	26, 1078, 2242, 2767, 3116
NsbI	TGCGCA	2 cut(s)	326, 1493
NspI	RCATGY	2 cut(s)	85, 2998
NspV	TTCGAA	3 cut(s)	167, 1210, 2374
PagI	TCATGA	4 cut(s)	1257, 1266, 2421, 2430
PcsI	WCGNNNNNNNCGW	2 cut(s)	989, 2153
PctI	GAATGC	2 cut(s)	615, 1779
PflMI	CCANNNNNTGG	1 cut(s)	3061
PkrI	GCNGC	7 cut(s)	49, 852, 1192, 2016, 2356, 2710, 3039
PleI	GAGTC	8 cut(s)	628, 832, 1053, 1264, 1792, 1996, 2217, 2428
PpsI	GAGTC	8 cut(s)	628, 832, 1053, 1264, 1792, 1996, 2217, 2428
Ppu21I	YACGTR	4 cut(s)	834, 1349, 1998, 2513
PpuMI	RGGWCCY	2 cut(s)	1252, 2416
Psp1406I	AACGTT	2 cut(s)	1215, 2379
Psp5II	RGGWCCY	2 cut(s)	1252, 2416
Psp6I	CCWGG	1 cut(s)	3049
PspFI	CCCAGC	2 cut(s)	1353, 2517
PspGI	CCWGG	1 cut(s)	3049
PspN4I	GGNNCC	8 cut(s)	250, 376, 862, 987, 1427, 1543, 2026, 2151
PspPI	GGNCC	4 cut(s)	986, 1252, 2150, 2416
PspPPI	RGGWCCY	2 cut(s)	1252, 2416
PsrI	GAACNNNNNNTAC	2 cut(s)	117, 149
PsuI	RGATCY	3 cut(s)	248, 1342, 2506
RsaI	GTAC	7 cut(s)	965, 1238, 2129, 2402, 2668, 2882, 3020
RsaNI	GTAC	7 cut(s)	964, 1237, 2128, 2401, 2667, 2881, 3019
RseI	CAYNNNNRTG	2 cut(s)	2636, 2765
SatI	GCNGC	7 cut(s)	48, 851, 1191, 2015, 2355, 2709, 3038
Sau96I	GGNCC	4 cut(s)	986, 1252, 2150, 2416
ScaI	AGTACT	1 cut(s)	3020
SchI	GAGTC	8 cut(s)	628, 832, 1054, 1264, 1792, 1996, 2218, 2428
ScrFI	CCNGG	1 cut(s)	3051
SduI	GDGCHC	1 cut(s)	2906
SfaNI	GCATC	8 cut(s)	312, 914, 997, 1479, 2078, 2161, 3213, 3250
SfuI	TTCGAA	3 cut(s)	167, 1210, 2374
SinI	GGWCC	2 cut(s)	1252, 2416
SmiMI	CAYNNNNRTG	2 cut(s)	2636, 2765
SmlI	CTYRAG	3 cut(s)	548, 1384, 1712
SmoI	CTYRAG	3 cut(s)	548, 1384, 1712
SnaBI	TACGTA	2 cut(s)	1349, 2513
SsiI	CCGC	4 cut(s)	48, 381, 1548, 3035
SspI	AATATT	3 cut(s)	1206, 2370, 3112
StyD4I	CCNGG	1 cut(s)	3049
StyI	CCWWGG	2 cut(s)	1122, 2286
TatI	WGTACW	5 cut(s)	1236, 2400, 2666, 2880, 3018
TauI	GCSGC	1 cut(s)	50
TscAI	CASTG	7 cut(s)	1087, 1305, 2251, 2469, 2958, 2985, 3064
TseFI	GTSAC	5 cut(s)	26, 1078, 2242, 2767, 3116
TseI	GCWGC	6 cut(s)	850, 1190, 2014, 2354, 2708, 3037
Tsp45I	GTSAC	5 cut(s)	26, 1078, 2242, 2767, 3116
TspGWI	ACGGA	4 cut(s)	981, 1323, 2145, 2487
TspRI	CASTG	7 cut(s)	1087, 1305, 2251, 2469, 2958, 2985, 3064
Van91I	CCANNNNNTGG	1 cut(s)	3061
Vha464I	CTTAAG	2 cut(s)	548, 1712
VneI	GTGCAC	1 cut(s)	2902
VpaK11BI	GGWCC	2 cut(s)	1252, 2416
XapI	RAATTY	8 cut(s)	776, 911, 1372, 1940, 2075, 2600, 2890, 2957
XceI	RCATGY	2 cut(s)	85, 2998
XcmI	CCANNNNNNNNNTGG	4 cut(s)	817, 1129, 1981, 2293
XmiI	GTMKAC	1 cut(s)	2532
ZrmI	AGTACT	1 cut(s)	3020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.