Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

38145856 .. 38148523

Gene Structure 2668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24772

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGTCGGAGAAGCAGCAATCTCCTAATCGAGGTGAAGTTGTGGTGGAAGTTGGAAGGGAAAAGAGCAATGAACCAAAAGACTCTTCAGCTAGCCAGACCCTCACCAAGAGAAAGTCATTCACTAGGTCAGTTGTCTCCAAACCCAAGTCGAGATTCGGTGATCCATTGCCCATTATGTATGAAGAGACTAGTTTAGATCAGGCAGCTGGGGCAAATTCCCCCAATGCTTCATTCAATAGGGAGTCCCCGAATGAAATCTCATTGGATAGGACTGAATCCTCCTCTGCGAAGAATGCACCGCCTTCTCCGGGCAGAACACAAGATGAGGAAGCTGAAGAGGTTTACAAGACGGCTAATGCGAAGAATGCACCACCAACTCCAGTTATAGCAGAAGATAAGCGTGGGAAAGTGAACAAGAAGCTCTCGGGGGAGTTGATTGTTTTTCTGTCCATTTTGGGTTGTTTAGTGGCTAGCTTGACTATCCATAAGCTAAAGGATCTTATGGTCTGGGGCTTGGAGATTTGGAAATGGTGTGTGCTTGTAATGGTGGTATCATGTGGCATGTTGATGACAAATTGGGTAATGCATTTCATAGTTTTCCTGATTGAGCGCAGCTTTTTGTTTAGGAAGAATGTGTTGTATTTTGTTTACGGATTGAAGAAGAATGCTCAGATTCTCATGTGGGTGGGTCTGGTTCTTCTCACATGGCTACTCTTGATCAAACGCGGGCTTCAGCAATCAAAAGTTTCCACTAAGATTCTGGCTTACATCACGCGAAGTATTGTTGCAGTTGTTATTGGGGCATCTTTGTGGTTGTTAAAGACTTTGATGGTTAAGATCTTAGCATCTAAATTCCAGGTGGTAACCTATTTTAGTAGAATTCAAGAATCGATATTCCATCAGTATGCTCTTCGGACACTTTCAGGACCTCCGCTTATGGAGGATGCAGAAGGCAGTATCACACTGAGTTTTACTAACAAGGCACATGCAGCAGGGAAGGAGATAGAGGTCACTGACATGGCAAAGCTTCAAAAGATAAAGCAAGAGAAGGTTTCTTCTGTTACCATGAAGGGACTGGTGGATGTAGTAACTACTTCCGGGCTGTCCGCGATGTCCCAGACATTGGACGAGAAGGAAGATCTGAATGAACAGAGATATAAGGAGATTACCAGTGAGACGGAAGCAACTGCTGCTGCTGCTGCCTATGACATCTACATTAAGGAATCTCCACATGGTGCCAAGTACATTGAGGAGCGGTATCTATTGAGGTTCATGATGAAGGAAGAGGTAGACCTTGTATGGCCACTGATTGACGTAGCAAAGACTGGACAAGTTGACAGAAAAACTCTTAACAGAGTGAAGGTCTACACTGCTCGCAAAGCATTAGCTCATGCATTGTCTGATACCAAAGCAGTTACAGCGCAAGTCGACAATCTTGTGAGTAGCATTGTGTTGATTATCATCATCGTCGTGGGTCTTCTAGTGGTGGAAATTGCAACCACAAGCTTTTTTGTCTTCCTATCATCACAGCTCGTATTAGCGGCTTTAGCTTTTGGAAACACTTGCAAGAATGTATTTGAATCTATCATGTTTCTATTTGTGGCGCATCCATATGATGTTGGTGACTGCATTGTTTTTGAAGGCGTTCCGATGATAGTTGAAGAGATGAACATCTTTACTACGGTTTTCTTGAAACTCAGTAATAACGAGAAGGTGTACTATCCAAATTCAGTTTTATCTGCAACATCGATCAGCAATTACTCCAGAAGTCCAGATATGAGAGATGCTGTAGAGTTCTCAATTGCATTAACACCTGTGGAGAAGATAGTCAATTTGAAAGAGAAAATAAAGGAATACATCGAGGGGAAGCCTCAATATTGGCATCGAAAACACAATGTGGCGGTGATTGACATCGAAGATGTTGATAAGTTAAAGATGGCCGTCTATTGTCAACACAAAATGAACTTTCAAGATTTTGAGGAAAAGAATTTGCGTAGAGCTAAGCTAAACTTCGAATTGCTGAAAATACTTGAAGAGCTAAACATCACAGTAATATCAGCTGTCCTCCCAAAAAGTGAATCTCACCCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

697

Amino Acids

78.34

Weight (kDa)

8.63

Isoelectric Point (pI)

40.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MS_channel_2nd	PF00924	521 - 589	7e-10	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1235
AccB7I	CCANNNNNTGG	1 cut(s)	1123
AccBSI	CCGCTC	1 cut(s)	1255
AccI	GTMKAC	3 cut(s)	1290, 1365, 1428
AccII	CGCG	3 cut(s)	726, 775, 1109
AciI	CCGC	7 cut(s)	299, 726, 932, 1107, 1255, 1541, 1901
AclWI	GGATC	2 cut(s)	155, 504
AcoI	YGGCCR	2 cut(s)	1301, 1938
AcsI	RAATTY	5 cut(s)	214, 851, 879, 1726, 1987
AcuI	CTGAAG	3 cut(s)	69, 354, 716
AdeI	CACNNNGTG	2 cut(s)	1235, 1897
AfaI	GTAC	2 cut(s)	1244, 1718
AfiI	CCNNNNNNNGG	3 cut(s)	29, 308, 1123
AhlI	ACTAGT	1 cut(s)	188
AjnI	CCWGG	1 cut(s)	855
AjuI	GAANNNNNNNTTGG	6 cut(s)	67, 99, 137, 169, 215, 247
Alw26I	GTCTC	3 cut(s)	139, 179, 1169
AlwI	GGATC	2 cut(s)	155, 504
Ama87I	CYCGRG	1 cut(s)	424
AoxI	GGCC	2 cut(s)	1301, 1938
ApeKI	GCWGC	8 cut(s)	13, 203, 612, 989, 1190, 1193, 1196, 1199
ApoI	RAATTY	5 cut(s)	214, 851, 879, 1726, 1987
Asp700I	GAANNNNTTC	1 cut(s)	1644
AspLEI	GCGC	3 cut(s)	612, 1423, 1606
AspS9I	GGNCC	1 cut(s)	926
AsuC2I	CCSGG	2 cut(s)	309, 1099
AsuHPI	GGTGA	6 cut(s)	44, 94, 170, 1634, 1915, 2075
AsuII	TTCGAA	1 cut(s)	2013
AsuNHI	GCTAGC	2 cut(s)	89, 470
AvaI	CYCGRG	1 cut(s)	424
AvaII	GGWCC	1 cut(s)	926
BalI	TGGCCA	1 cut(s)	1303
BanI	GGYRCC	1 cut(s)	1235
BbsI	GAAGAC	2 cut(s)	1469, 1507
BbvI	GCAGC	8 cut(s)	25, 215, 624, 1001, 1177, 1180, 1183, 1186
BccI	CCATC	3 cut(s)	823, 906, 1930
BceAI	ACGGC	2 cut(s)	366, 1925
BciT130I	CCWGG	1 cut(s)	857
BclI	TGATCA	1 cut(s)	717
BcnI	CCSGG	2 cut(s)	309, 1099
BcoDI	GTCTC	3 cut(s)	139, 179, 1169
BcuI	ACTAGT	1 cut(s)	188
BfaI	CTAG	5 cut(s)	90, 123, 189, 471, 1481
BfmI	CTRYAG	1 cut(s)	1788
BglII	AGATCT	2 cut(s)	837, 1138
BisI	GCNGC	9 cut(s)	14, 204, 613, 990, 1191, 1194, 1197, 1200, 1542
BlpI	GCTNAGC	1 cut(s)	2001
BlsI	GCNGC	9 cut(s)	15, 205, 614, 991, 1192, 1195, 1198, 1201, 1543
Bme1390I	CCNGG	3 cut(s)	309, 857, 1099
Bme18I	GGWCC	1 cut(s)	926
BmeT110I	CYCGRG	1 cut(s)	424
BmgT120I	GGNCC	1 cut(s)	926
BmiI	GGNNCC	1 cut(s)	1237
BmrFI	CCNGG	3 cut(s)	309, 857, 1099
BmsI	GCATC	6 cut(s)	812, 854, 934, 1615, 1774, 1891
BmtI	GCTAGC	2 cut(s)	93, 474
BpiI	GAAGAC	2 cut(s)	1469, 1507
BpmI	CTGGAG	2 cut(s)	363, 1747
Bpu1102I	GCTNAGC	1 cut(s)	2001
Bpu14I	TTCGAA	1 cut(s)	2013
BpuMI	CCSGG	2 cut(s)	309, 1099
Bsa29I	ATCGAT	2 cut(s)	890, 1748
BsaBI	GATNNNNATC	3 cut(s)	1460, 1670, 1910
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 308, 1123
Bse1I	ACTGG	4 cut(s)	380, 1080, 1170, 1330
Bse3DI	GCAATG	2 cut(s)	73, 164
Bse8I	GATNNNNATC	3 cut(s)	1460, 1670, 1910
BseBI	CCWGG	1 cut(s)	857
BseCI	ATCGAT	2 cut(s)	890, 1748
BseGI	GGATG	3 cut(s)	949, 1087, 1606
BseJI	GATNNNNATC	3 cut(s)	1460, 1670, 1910
BseLI	CCNNNNNNNGG	3 cut(s)	29, 308, 1123
BseMI	GCAATG	2 cut(s)	73, 164
BseMII	CTCAG	3 cut(s)	683, 956, 1711
BseNI	ACTGG	4 cut(s)	380, 1080, 1170, 1330
BseRI	GAGGAG	2 cut(s)	271, 1265
BseXI	GCAGC	8 cut(s)	25, 215, 624, 1001, 1177, 1180, 1183, 1186
BseYI	CCCAGC	1 cut(s)	206
Bsh1236I	CGCG	3 cut(s)	726, 775, 1109
BshFI	GGCC	2 cut(s)	1303, 1940
BshNI	GGYRCC	1 cut(s)	1235
BshVI	ATCGAT	2 cut(s)	890, 1748
BsiHKCI	CYCGRG	1 cut(s)	424
BsiSI	CCGG	2 cut(s)	308, 1098
BslFI	GGGAC	3 cut(s)	229, 1086, 1099
BslI	CCNNNNNNNGG	3 cut(s)	29, 308, 1123
BsmAI	GTCTC	3 cut(s)	139, 179, 1169
BsmBI	CGTCTC	1 cut(s)	1169
BsmFI	GGGAC	3 cut(s)	229, 1086, 1099
BsmI	GAATGC	3 cut(s)	298, 370, 670
BsnI	GGCC	2 cut(s)	1303, 1940
BsoBI	CYCGRG	1 cut(s)	424
Bsp119I	TTCGAA	1 cut(s)	2013
Bsp143I	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
Bsp1720I	GCTNAGC	1 cut(s)	2001
BspACI	CCGC	7 cut(s)	299, 726, 932, 1107, 1255, 1541, 1901
BspANI	GGCC	2 cut(s)	1303, 1940
BspCNI	CTCAG	3 cut(s)	682, 957, 1710
BspDI	ATCGAT	2 cut(s)	890, 1748
BspFNI	CGCG	3 cut(s)	726, 775, 1109
BspHI	TCATGA	1 cut(s)	1272
BspLI	GGNNCC	1 cut(s)	1237
BspOI	GCTAGC	2 cut(s)	93, 474
BspPI	GGATC	2 cut(s)	155, 504
BspQI	GCTCTTC	2 cut(s)	915, 2028
BspT104I	TTCGAA	1 cut(s)	2013
BspT107I	GGYRCC	1 cut(s)	1235
BsrBI	CCGCTC	1 cut(s)	1255
BsrDI	GCAATG	2 cut(s)	73, 164
BsrI	ACTGG	4 cut(s)	380, 1080, 1170, 1330
BssMI	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
Bst2UI	CCWGG	1 cut(s)	857
Bst4CI	ACNGT	2 cut(s)	1684, 2050
Bst6I	CTCTTC	7 cut(s)	88, 177, 330, 915, 1278, 1656, 2028
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstBI	TTCGAA	1 cut(s)	2013
BstC8I	GCNNGC	4 cut(s)	91, 472, 728, 1375
BstDEI	CTNAG	6 cut(s)	669, 753, 841, 965, 1697, 2001
BstEII	GGTNACC	1 cut(s)	862
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	3 cut(s)	949, 1087, 1606
BstFNI	CGCG	3 cut(s)	726, 775, 1109
BstHHI	GCGC	3 cut(s)	612, 1423, 1606
BstKTI	GATC	7 cut(s)	163, 199, 499, 720, 840, 1141, 1752
BstMAI	GTCTC	3 cut(s)	139, 179, 1169
BstMBI	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
BstNI	CCWGG	1 cut(s)	857
BstNSI	RCATGY	2 cut(s)	565, 989
BstPI	GGTNACC	1 cut(s)	862
BstSCI	CCNGG	3 cut(s)	307, 855, 1097
BstSFI	CTRYAG	1 cut(s)	1788
BstUI	CGCG	3 cut(s)	726, 775, 1109
BstV1I	GCAGC	8 cut(s)	25, 215, 624, 1001, 1177, 1180, 1183, 1186
BstV2I	GAAGAC	2 cut(s)	1469, 1507
BstX2I	RGATCY	3 cut(s)	496, 837, 1138
BstYI	RGATCY	3 cut(s)	496, 837, 1138
Bsu15I	ATCGAT	2 cut(s)	890, 1748
BsuRI	GGCC	2 cut(s)	1303, 1940
BsuTUI	ATCGAT	2 cut(s)	890, 1748
BtgZI	GCGATG	1 cut(s)	1124
BtsCI	GGATG	3 cut(s)	949, 1087, 1606
BtsI	GCAGTG	1 cut(s)	1368
BtsIMutI	CAGTG	5 cut(s)	962, 1011, 1177, 1304, 1368
Cac8I	GCNNGC	4 cut(s)	91, 472, 728, 1375
CciI	TCATGA	1 cut(s)	1272
CfoI	GCGC	3 cut(s)	612, 1423, 1606
Cfr13I	GGNCC	1 cut(s)	926
ClaI	ATCGAT	2 cut(s)	890, 1748
Csp6I	GTAC	2 cut(s)	1243, 1717
CviQI	GTAC	2 cut(s)	1243, 1717
DdeI	CTNAG	6 cut(s)	669, 753, 841, 965, 1697, 2001
DpnI	GATC	7 cut(s)	162, 198, 498, 719, 839, 1140, 1751
DpnII	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
DraIII	CACNNNGTG	2 cut(s)	1235, 1897
EaeI	YGGCCR	2 cut(s)	1301, 1938
Eam1104I	CTCTTC	7 cut(s)	88, 177, 330, 915, 1278, 1656, 2028
EarI	CTCTTC	7 cut(s)	88, 177, 330, 915, 1278, 1656, 2028
Eco47I	GGWCC	1 cut(s)	926
Eco57I	CTGAAG	3 cut(s)	69, 354, 716
Eco88I	CYCGRG	1 cut(s)	424
Eco91I	GGTNACC	1 cut(s)	862
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoO109I	RGGNCCY	1 cut(s)	926
EcoO65I	GGTNACC	1 cut(s)	862
EcoRI	GAATTC	1 cut(s)	879
EcoRII	CCWGG	1 cut(s)	855
EcoT22I	ATGCAT	2 cut(s)	588, 1396
Esp3I	CGTCTC	1 cut(s)	1169
FalI	AAGNNNNNCTT	2 cut(s)	1994, 2026
FaqI	GGGAC	3 cut(s)	229, 1086, 1099
FauI	CCCGC	1 cut(s)	719
FauNDI	CATATG	1 cut(s)	1612
FbaI	TGATCA	1 cut(s)	717
FblI	GTMKAC	3 cut(s)	1290, 1365, 1428
Fnu4HI	GCNGC	9 cut(s)	14, 204, 613, 990, 1191, 1194, 1197, 1200, 1542
FokI	GGATG	3 cut(s)	956, 1094, 1593
Fsp4HI	GCNGC	9 cut(s)	14, 204, 613, 990, 1191, 1194, 1197, 1200, 1542
FspBI	CTAG	5 cut(s)	90, 123, 189, 471, 1481
GlaI	GCGC	3 cut(s)	611, 1422, 1605
GluI	GCNGC	9 cut(s)	14, 204, 613, 990, 1191, 1194, 1197, 1200, 1542
GsaI	CCCAGC	1 cut(s)	210
GsuI	CTGGAG	2 cut(s)	363, 1747
HaeIII	GGCC	2 cut(s)	1303, 1940
HapII	CCGG	2 cut(s)	308, 1098
HhaI	GCGC	3 cut(s)	612, 1423, 1606
Hin6I	GCGC	3 cut(s)	610, 1421, 1604
HinP1I	GCGC	3 cut(s)	610, 1421, 1604
HincII	GTYRAC	3 cut(s)	1336, 1429, 1952
HindII	GTYRAC	3 cut(s)	1336, 1429, 1952
HindIII	AAGCTT	2 cut(s)	1025, 1504
HpaII	CCGG	2 cut(s)	308, 1098
HphI	GGTGA	6 cut(s)	44, 94, 170, 1634, 1915, 2075
Hpy166II	GTNNAC	9 cut(s)	343, 412, 649, 1291, 1336, 1366, 1429, 1717, 1952
Hpy188I	TCNGA	6 cut(s)	7, 672, 915, 1143, 1402, 1650
Hpy8I	GTNNAC	9 cut(s)	343, 412, 649, 1291, 1336, 1366, 1429, 1717, 1952
Hpy99I	CGWCG	1 cut(s)	1472
HpyCH4III	ACNGT	2 cut(s)	1684, 2050
HpyCH4IV	ACGT	1 cut(s)	1314
HpyF3I	CTNAG	6 cut(s)	669, 753, 841, 965, 1697, 2001
HpySE526I	ACGT	1 cut(s)	1314
HspAI	GCGC	3 cut(s)	610, 1421, 1604
Ksp22I	TGATCA	1 cut(s)	717
Kzo9I	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
LguI	GCTCTTC	2 cut(s)	915, 2028
LmnI	GCTCC	1 cut(s)	1252
Lsp1109I	GCAGC	8 cut(s)	25, 215, 624, 1001, 1177, 1180, 1183, 1186
LweI	GCATC	6 cut(s)	812, 854, 934, 1615, 1774, 1891
MaeI	CTAG	5 cut(s)	90, 123, 189, 471, 1481
MaeII	ACGT	1 cut(s)	1314
MaeIII	GTNAC	6 cut(s)	862, 1009, 1060, 1087, 1414, 1622
MalI	GATC	7 cut(s)	162, 198, 498, 719, 839, 1140, 1751
MbiI	CCGCTC	1 cut(s)	1255
MboI	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
MfeI	CAATTG	1 cut(s)	1800
MflI	RGATCY	3 cut(s)	496, 837, 1138
MlsI	TGGCCA	1 cut(s)	1303
MluNI	TGGCCA	1 cut(s)	1303
MlyI	GAGTC	2 cut(s)	74, 251
MmeI	TCCRAC	1 cut(s)	31
Mox20I	TGGCCA	1 cut(s)	1303
Mph1103I	ATGCAT	2 cut(s)	588, 1396
MroXI	GAANNNNTTC	1 cut(s)	1644
MscI	TGGCCA	1 cut(s)	1303
MseI	TTAA	6 cut(s)	818, 834, 1218, 1350, 1808, 1931
MslI	CAYNNNNRTG	7 cut(s)	566, 683, 808, 903, 1016, 1469, 1611
Msp20I	TGGCCA	1 cut(s)	1303
MspA1I	CMGCKG	2 cut(s)	206, 2060
MspI	CCGG	2 cut(s)	308, 1098
MspR9I	CCNGG	3 cut(s)	309, 857, 1099
MunI	CAATTG	1 cut(s)	1800
Mva1269I	GAATGC	3 cut(s)	298, 370, 670
MvaI	CCWGG	1 cut(s)	857
MvnI	CGCG	3 cut(s)	726, 775, 1109
NciI	CCSGG	2 cut(s)	309, 1099
NdeI	CATATG	1 cut(s)	1612
NdeII	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
NheI	GCTAGC	2 cut(s)	89, 470
NlaIV	GGNNCC	1 cut(s)	1237
NmuCI	GTSAC	2 cut(s)	1009, 1622
NsiI	ATGCAT	2 cut(s)	588, 1396
NspI	RCATGY	2 cut(s)	565, 989
NspV	TTCGAA	1 cut(s)	2013
PagI	TCATGA	1 cut(s)	1272
PciSI	GCTCTTC	2 cut(s)	915, 2028
PcsI	WCGNNNNNNNCGW	1 cut(s)	356
PctI	GAATGC	3 cut(s)	298, 370, 670
PdmI	GAANNNNTTC	1 cut(s)	1644
PfeI	GAWTC	8 cut(s)	153, 275, 673, 757, 887, 1223, 1580, 2078
PflMI	CCANNNNNTGG	1 cut(s)	1123
PkrI	GCNGC	9 cut(s)	15, 205, 614, 991, 1192, 1195, 1198, 1201, 1543
PleI	GAGTC	2 cut(s)	74, 250
PpsI	GAGTC	2 cut(s)	74, 250
PpuMI	RGGWCCY	1 cut(s)	926
Psp5II	RGGWCCY	1 cut(s)	926
Psp6I	CCWGG	1 cut(s)	855
PspEI	GGTNACC	1 cut(s)	862
PspFI	CCCAGC	1 cut(s)	206
PspGI	CCWGG	1 cut(s)	855
PspN4I	GGNNCC	1 cut(s)	1237
PspPI	GGNCC	1 cut(s)	926
PspPPI	RGGWCCY	1 cut(s)	926
PsuI	RGATCY	3 cut(s)	496, 837, 1138
PvuII	CAGCTG	2 cut(s)	206, 2060
RsaI	GTAC	2 cut(s)	1244, 1718
RsaNI	GTAC	2 cut(s)	1243, 1717
RseI	CAYNNNNRTG	7 cut(s)	566, 683, 808, 903, 1016, 1469, 1611
SalI	GTCGAC	1 cut(s)	1427
SapI	GCTCTTC	2 cut(s)	915, 2028
SaqAI	TTAA	6 cut(s)	818, 834, 1218, 1350, 1808, 1931
SatI	GCNGC	9 cut(s)	14, 204, 613, 990, 1191, 1194, 1197, 1200, 1542
Sau3AI	GATC	7 cut(s)	160, 196, 496, 717, 837, 1138, 1749
Sau96I	GGNCC	1 cut(s)	926
SchI	GAGTC	2 cut(s)	74, 251
ScrFI	CCNGG	3 cut(s)	309, 857, 1099
SfaNI	GCATC	6 cut(s)	812, 854, 934, 1615, 1774, 1891
SfcI	CTRYAG	1 cut(s)	1788
SfuI	TTCGAA	1 cut(s)	2013
SinI	GGWCC	1 cut(s)	926
SmiMI	CAYNNNNRTG	7 cut(s)	566, 683, 808, 903, 1016, 1469, 1611
SpeI	ACTAGT	1 cut(s)	188
SsiI	CCGC	7 cut(s)	299, 726, 932, 1107, 1255, 1541, 1901
SspI	AATATT	1 cut(s)	1877
SspMI	CTAG	5 cut(s)	90, 123, 189, 471, 1481
StyD4I	CCNGG	3 cut(s)	307, 855, 1097
TaaI	ACNGT	2 cut(s)	1684, 2050
TaiI	ACGT	1 cut(s)	1317
TaqI	TCGA	9 cut(s)	28, 149, 890, 1428, 1748, 1860, 1885, 1914, 2013
TatI	WGTACW	2 cut(s)	1242, 1716
TauI	GCSGC	1 cut(s)	1544
TfiI	GAWTC	8 cut(s)	153, 275, 673, 757, 887, 1223, 1580, 2078
Tru1I	TTAA	6 cut(s)	818, 834, 1218, 1350, 1808, 1931
Tru9I	TTAA	6 cut(s)	818, 834, 1218, 1350, 1808, 1931
TscAI	CASTG	5 cut(s)	969, 1018, 1177, 1311, 1375
TseFI	GTSAC	2 cut(s)	1009, 1622
TseI	GCWGC	8 cut(s)	13, 203, 612, 989, 1190, 1193, 1196, 1199
Tsp45I	GTSAC	2 cut(s)	1009, 1622
TspGWI	ACGGA	2 cut(s)	666, 1193
TspRI	CASTG	5 cut(s)	969, 1018, 1177, 1311, 1375
Van91I	CCANNNNNTGG	1 cut(s)	1123
VpaK11BI	GGWCC	1 cut(s)	926
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	5 cut(s)	214, 851, 879, 1726, 1987
XceI	RCATGY	2 cut(s)	565, 989
XcmI	CCANNNNNNNNNTGG	2 cut(s)	757, 1072
XmiI	GTMKAC	3 cut(s)	1290, 1365, 1428
XmnI	GAANNNNTTC	1 cut(s)	1644
XspI	CTAG	5 cut(s)	90, 123, 189, 471, 1481
Zsp2I	ATGCAT	2 cut(s)	588, 1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.