Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006781.1

Orthogroup ID

OG0000828

Physical Location & Seq

Genomic Coordinates Forward (+)

19590 .. 22864

Gene Structure 3275 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006781.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

atggagggtcaagaagaaggagatacggatggccgggattcgcgagccaaacaagcgcttccggatttggctcgggtcgtactcgactccgaaaggcagcggtcaagcatgtcggagaagcagcaatctcctaatggaggtgaagttgtggtggaagttggaagggaaaagatcaatgaaccaaaagactcttcagctagccagaccctcactaagagaaagtcattcactaggtcagttgtctccaaacccaagtcgagattcggtgatccattgcccattatgtatgaagagactaatttagatcaggcagctggggcaaattcccccaatgcttcattcaatagggagtccccgaatgaaatctcattggataggactgaatcctcctctgcgaagaatgcaccgccttctccgggcagaacacaagatgaggaagctgaagaggtttacaagacggctaatgcgaagaatgcaccaccaactccagttatagcagaagatgaagaggatgaagagatatacaacaaggttaaattgagtagagataagcgtgggaaagtgaacaagaagctctcgggggagttgattgtttttctgtccattttgggttgtttagtggctagcttgactatccataagctaaaggatcttatggtctggggcttggagatttggaaatggtgtgtgcttgtaatggtggtatcatgtggcatgttgatgacaaattgggtaatgcatttcatagttttcgtgattgagcgcaactttttgtttaggaagaaggtgttgtattttgtttacggattgaagaagaatgctcagattctcatgtgggtgggtctggttcttctcacatggctactcttgatcaaacgcgggcttcagcaatcaaaagtttccactaagattctggcttacgtcacgcgaagtattgttgcagttgttattggggcatctttgtggttgttaaagactttgttggttaagatcttagcatctaaattccaggtggtaacctattttagtagaattcaagaatcgatattccatcagtatgctcttcagacactttcaggacctccgcttatggaggatgcttttgaaagatcagaaggcagtatcacactgagttttagaacgactaacaaggcacatgcagcagggaaggagatagaggtcattgacatggcaaagcttcaaaagataaagcaagagaaggtttcttctattaccatgaagggactggtggatgcagtaattactttcgggctgtccacgatgtcccagacattggacgagaaggaagatctgaatgaacagagagataaggagattaccagtgagacggaagcaactgctgctgcctattacatattccttaatgtagctccacatggtgccaagtacattgaggagcggtatctattgaggttcatgatgaaggaagaggtagaccttgtatggccactgattgacgtagcaaagactggacaagttgacagaaaaactctaacagagtgggtggtgaaggtctacactgctcgcaaagcattagctcatgcactgtctgataccaaagcagttacagcgcaagtcgacaatcttgtgagtagcattgtgttgattatcatcatcgtcgtgggtcttctagtggtggaaattgcaaccacaagcttttttgtcttcctatcatcacagctcgtattagcggcttttgcttttggaaacacttgcaagaatgtatttgaatctatcatgtttctatttgtggcgcatccatatgatgttggtgactgcattgtttttgaaggcgttccgatgatagttgaagagatgaacatctttactacggttttcttgaaactcagtaataacgagaaggtgtactatccaaattcagttttatctgcaacatcgatcagcaattactccagaagtccagatatgagagatgttgtagagttctcaattgcattaacacctgtggagaagatagtcaatttgaaagagaaaataaaggaatacatcgaggggaagcctcaatattggcatcgaaaacacaatgtggcggtgattgacatcgaagatgttgataagttaaagatggccgtctattgtcaacacaaaatgaactttcaagattttgaggaaaagaatttgcgtagagctgagctaaacttcgaattgctgaaaattcttgaagagctaaacatcacagtaatatcagctgtcctcccaaaaagtgaatctcacccaaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

754

Amino Acids

85.07

Weight (kDa)

6.35

Isoelectric Point (pI)

43.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12080 AT5G12080 AT5G12080 AT5G19520 AT5G19520
fragaria_vesca	FvH4_2g31211 FvH4_2g31220 FvH4_2g31230 FvH4_2g31240
malus_domestica	MD08G1070000.v1.1 MD15G1052100.v1.1
prunus_persica	Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1 Prupe.1G406100_v2.0.a1
pyrus_communis	pycom08g05800 pycom15g04990 pycom16g12570
rosa_chinensis	RchiOBHm_Chr1g0326931 RchiOBHm_Chr1g0326941 RchiOBHm_Chr6g0276141 RchiOBHm_Chr6g0283901 RchiOBHm_Chr6g0311561 RchiOBHm_Chr6g0311571 RchiOBHm_Chr6g0311581 RchiOBHm_Chr6g0311591
rosa_laevigata	RLG00000010389 RLG00000010390 RLG00000010391 RLG00000010393 RLG00000012788 RLG00000030050
rosa_multiflora	Rmu_sc0003315.1_g000003 Rmu_sc0006781.1_g000009 Rmu_sc0007556.1_g000006 Rmu_sc0018059.1_g000002 Rmu_sc0018059.1_g000003
rosa_roxburghii	Rroxscaffold_4G00323490 Rroxscaffold_7G00157470 Rroxscaffold_7G00157480 Rroxscaffold_7G00157490 Rroxscaffold_7G00185080
rosa_rugosa	Rorug01G0062100 Rorug01G0062300 Rorug06G0158200 Rorug06G0158300 Rorug06G0389800.1 Rorug06G0389900
rosa_samantha	Rh1AG079400 Rh1BG063600 Rh1CG077000 Rh1DG083500 Rh6AG504700 Rh6AG504800 Rh6AG504900 Rh6BG272400 Rh6BG515600 Rh6BG515700 Rh6BG515800 Rh6CG521400 Rh6CG521600 Rh6DG266500 Rh6DG507300 Rh6DG507400
rosa_wichuraiana	Rw1G006300 Rw6G018310 Rw6G023400 Rw6G043960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1400
AccB7I	CCANNNNNTGG	1 cut(s)	1294
AccBSI	CCGCTC	1 cut(s)	1420
AccI	GTMKAC	3 cut(s)	1455, 1536, 1599
AccII	CGCG	3 cut(s)	43, 879, 928
AccIII	TCCGGA	1 cut(s)	61
AciI	CCGC	7 cut(s)	100, 407, 879, 1085, 1420, 1712, 2072
AclWI	GGATC	2 cut(s)	263, 657
AcoI	YGGCCR	3 cut(s)	31, 1466, 2109
AcsI	RAATTY	6 cut(s)	322, 1004, 1032, 1897, 2158, 2196
AcuI	CTGAAG	4 cut(s)	177, 462, 869, 1049
AdeI	CACNNNGTG	2 cut(s)	1400, 2068
AfaI	GTAC	3 cut(s)	81, 1409, 1889
AfeI	AGCGCT	1 cut(s)	57
AfiI	CCNNNNNNNGG	3 cut(s)	137, 416, 1294
AjnI	CCWGG	1 cut(s)	1008
AjuI	GAANNNNNNNTTGG	6 cut(s)	175, 207, 245, 277, 323, 355
Alw26I	GTCTC	3 cut(s)	247, 287, 1340
AlwI	GGATC	2 cut(s)	263, 657
Ama87I	CYCGRG	2 cut(s)	72, 577
Aor13HI	TCCGGA	1 cut(s)	61
Aor51HI	AGCGCT	1 cut(s)	57
AoxI	GGCC	3 cut(s)	31, 1466, 2109
ApeKI	GCWGC	6 cut(s)	97, 121, 311, 1160, 1361, 1364
ApoI	RAATTY	6 cut(s)	322, 1004, 1032, 1897, 2158, 2196
Asp700I	GAANNNNTTC	1 cut(s)	1815
AspLEI	GCGC	4 cut(s)	58, 765, 1594, 1777
AspS9I	GGNCC	1 cut(s)	1079
AsuC2I	CCSGG	2 cut(s)	35, 417
AsuHPI	GGTGA	6 cut(s)	152, 278, 1540, 1805, 2086, 2246
AsuII	TTCGAA	1 cut(s)	2184
AsuNHI	GCTAGC	2 cut(s)	197, 623
AvaI	CYCGRG	2 cut(s)	72, 577
AvaII	GGWCC	1 cut(s)	1079
BalI	TGGCCA	1 cut(s)	1468
BanI	GGYRCC	1 cut(s)	1400
BbsI	GAAGAC	2 cut(s)	1640, 1678
BbvI	GCAGC	6 cut(s)	109, 133, 323, 1172, 1348, 1351
BccI	CCATC	3 cut(s)	23, 1059, 2101
BceAI	ACGGC	2 cut(s)	474, 2096
BciT130I	CCWGG	1 cut(s)	1010
BclI	TGATCA	1 cut(s)	870
BcnI	CCSGG	2 cut(s)	35, 417
BcoDI	GTCTC	3 cut(s)	247, 287, 1340
BfaI	CTAG	4 cut(s)	198, 231, 624, 1652
BfoI	RGCGCY	1 cut(s)	59
BglII	AGATCT	2 cut(s)	990, 1309
BisI	GCNGC	7 cut(s)	98, 122, 312, 1161, 1362, 1365, 1713
BlpI	GCTNAGC	1 cut(s)	2172
BlsI	GCNGC	7 cut(s)	99, 123, 313, 1162, 1363, 1366, 1714
Bme1390I	CCNGG	3 cut(s)	35, 417, 1010
Bme18I	GGWCC	1 cut(s)	1079
BmeT110I	CYCGRG	2 cut(s)	72, 577
BmgT120I	GGNCC	1 cut(s)	1079
BmiI	GGNNCC	1 cut(s)	1402
BmrFI	CCNGG	3 cut(s)	35, 417, 1010
BmsI	GCATC	6 cut(s)	965, 1007, 1087, 1243, 1786, 2062
BmtI	GCTAGC	2 cut(s)	201, 627
BpiI	GAAGAC	2 cut(s)	1640, 1678
BpmI	CTGGAG	2 cut(s)	471, 1918
Bpu1102I	GCTNAGC	1 cut(s)	2172
Bpu14I	TTCGAA	1 cut(s)	2184
BpuMI	CCSGG	2 cut(s)	35, 417
Bsa29I	ATCGAT	2 cut(s)	1043, 1919
BsaBI	GATNNNNATC	3 cut(s)	1631, 1841, 2081
BsaWI	WCCGGW	1 cut(s)	61
BsaXI	ACNNNNNCTCC	2 cut(s)	129, 159
Bsc4I	CCNNNNNNNGG	3 cut(s)	137, 416, 1294
Bse1I	ACTGG	4 cut(s)	488, 1251, 1341, 1495
Bse3DI	GCAATG	1 cut(s)	272
Bse8I	GATNNNNATC	3 cut(s)	1631, 1841, 2081
BseAI	TCCGGA	1 cut(s)	61
BseBI	CCWGG	1 cut(s)	1010
BseCI	ATCGAT	2 cut(s)	1043, 1919
BseGI	GGATG	5 cut(s)	34, 517, 1102, 1258, 1777
BseJI	GATNNNNATC	3 cut(s)	1631, 1841, 2081
BseLI	CCNNNNNNNGG	3 cut(s)	137, 416, 1294
BseMI	GCAATG	1 cut(s)	272
BseMII	CTCAG	4 cut(s)	836, 1121, 1882, 2163
BseNI	ACTGG	4 cut(s)	488, 1251, 1341, 1495
BseRI	GAGGAG	2 cut(s)	379, 1430
BseXI	GCAGC	6 cut(s)	109, 133, 323, 1172, 1348, 1351
BseYI	CCCAGC	1 cut(s)	314
Bsh1236I	CGCG	3 cut(s)	43, 879, 928
BshFI	GGCC	3 cut(s)	33, 1468, 2111
BshNI	GGYRCC	1 cut(s)	1400
BshVI	ATCGAT	2 cut(s)	1043, 1919
BsiHKCI	CYCGRG	2 cut(s)	72, 577
BsiSI	CCGG	3 cut(s)	34, 62, 416
BslFI	GGGAC	3 cut(s)	337, 1257, 1270
BslI	CCNNNNNNNGG	3 cut(s)	137, 416, 1294
BsmAI	GTCTC	3 cut(s)	247, 287, 1340
BsmBI	CGTCTC	1 cut(s)	1340
BsmFI	GGGAC	3 cut(s)	337, 1257, 1270
BsmI	GAATGC	3 cut(s)	406, 478, 823
BsnI	GGCC	3 cut(s)	33, 1468, 2111
BsoBI	CYCGRG	2 cut(s)	72, 577
Bsp119I	TTCGAA	1 cut(s)	2184
Bsp13I	TCCGGA	1 cut(s)	61
Bsp143I	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
Bsp1720I	GCTNAGC	1 cut(s)	2172
Bsp68I	TCGCGA	1 cut(s)	43
BspACI	CCGC	7 cut(s)	100, 407, 879, 1085, 1420, 1712, 2072
BspANI	GGCC	3 cut(s)	33, 1468, 2111
BspCNI	CTCAG	4 cut(s)	835, 1122, 1881, 2164
BspDI	ATCGAT	2 cut(s)	1043, 1919
BspEI	TCCGGA	1 cut(s)	61
BspFNI	CGCG	3 cut(s)	43, 879, 928
BspHI	TCATGA	1 cut(s)	1437
BspLI	GGNNCC	1 cut(s)	1402
BspOI	GCTAGC	2 cut(s)	201, 627
BspPI	GGATC	2 cut(s)	263, 657
BspQI	GCTCTTC	2 cut(s)	1068, 2199
BspT104I	TTCGAA	1 cut(s)	2184
BspT107I	GGYRCC	1 cut(s)	1400
BsrBI	CCGCTC	1 cut(s)	1420
BsrDI	GCAATG	1 cut(s)	272
BsrI	ACTGG	4 cut(s)	488, 1251, 1341, 1495
BssMI	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
Bst2UI	CCWGG	1 cut(s)	1010
Bst4CI	ACNGT	3 cut(s)	1569, 1855, 2221
Bst6I	CTCTTC	9 cut(s)	196, 285, 438, 501, 510, 1068, 1443, 1827, 2199
BstAPI	GCANNNNNTGC	1 cut(s)	1361
BstBI	TTCGAA	1 cut(s)	2184
BstC8I	GCNNGC	5 cut(s)	45, 199, 625, 881, 1546
BstDEI	CTNAG	7 cut(s)	213, 822, 906, 994, 1130, 1868, 2172
BstEII	GGTNACC	1 cut(s)	1015
BstENI	CCTNNNNNAGG	1 cut(s)	135
BstF5I	GGATG	5 cut(s)	34, 517, 1102, 1258, 1777
BstFNI	CGCG	3 cut(s)	43, 879, 928
BstH2I	RGCGCY	1 cut(s)	59
BstHHI	GCGC	4 cut(s)	58, 765, 1594, 1777
BstKTI	GATC	9 cut(s)	174, 271, 307, 652, 873, 993, 1112, 1312, 1923
BstMAI	GTCTC	3 cut(s)	247, 287, 1340
BstMBI	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 317, 401, 473, 1160, 1361, 1550, 1589, 1718
BstNI	CCWGG	1 cut(s)	1010
BstNSI	RCATGY	3 cut(s)	112, 718, 1160
BstPI	GGTNACC	1 cut(s)	1015
BstSCI	CCNGG	3 cut(s)	33, 415, 1008
BstUI	CGCG	3 cut(s)	43, 879, 928
BstV1I	GCAGC	6 cut(s)	109, 133, 323, 1172, 1348, 1351
BstV2I	GAAGAC	2 cut(s)	1640, 1678
BstX2I	RGATCY	3 cut(s)	649, 990, 1309
BstYI	RGATCY	3 cut(s)	649, 990, 1309
Bsu15I	ATCGAT	2 cut(s)	1043, 1919
BsuRI	GGCC	3 cut(s)	33, 1468, 2111
BsuTUI	ATCGAT	2 cut(s)	1043, 1919
BtsCI	GGATG	5 cut(s)	34, 517, 1102, 1258, 1777
BtsI	GCAGTG	1 cut(s)	1539
BtsIMutI	CAGTG	5 cut(s)	1127, 1348, 1469, 1539, 1565
BtuMI	TCGCGA	1 cut(s)	43
Cac8I	GCNNGC	5 cut(s)	45, 199, 625, 881, 1546
CciI	TCATGA	1 cut(s)	1437
CfoI	GCGC	4 cut(s)	58, 765, 1594, 1777
Cfr13I	GGNCC	1 cut(s)	1079
ClaI	ATCGAT	2 cut(s)	1043, 1919
Csp6I	GTAC	3 cut(s)	80, 1408, 1888
CviQI	GTAC	3 cut(s)	80, 1408, 1888
DdeI	CTNAG	7 cut(s)	213, 822, 906, 994, 1130, 1868, 2172
DpnI	GATC	9 cut(s)	173, 270, 306, 651, 872, 992, 1111, 1311, 1922
DpnII	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
DraIII	CACNNNGTG	2 cut(s)	1400, 2068
EaeI	YGGCCR	3 cut(s)	31, 1466, 2109
Eam1104I	CTCTTC	9 cut(s)	196, 285, 438, 501, 510, 1068, 1443, 1827, 2199
EarI	CTCTTC	9 cut(s)	196, 285, 438, 501, 510, 1068, 1443, 1827, 2199
Eco47I	GGWCC	1 cut(s)	1079
Eco47III	AGCGCT	1 cut(s)	57
Eco57I	CTGAAG	4 cut(s)	177, 462, 869, 1049
Eco88I	CYCGRG	2 cut(s)	72, 577
Eco91I	GGTNACC	1 cut(s)	1015
EcoNI	CCTNNNNNAGG	1 cut(s)	135
EcoO109I	RGGNCCY	1 cut(s)	1079
EcoO65I	GGTNACC	1 cut(s)	1015
EcoRI	GAATTC	1 cut(s)	1032
EcoRII	CCWGG	1 cut(s)	1008
EcoT22I	ATGCAT	1 cut(s)	741
Esp3I	CGTCTC	1 cut(s)	1340
FaqI	GGGAC	3 cut(s)	337, 1257, 1270
FauI	CCCGC	1 cut(s)	872
FauNDI	CATATG	1 cut(s)	1783
FbaI	TGATCA	1 cut(s)	870
FblI	GTMKAC	3 cut(s)	1455, 1536, 1599
Fnu4HI	GCNGC	7 cut(s)	98, 122, 312, 1161, 1362, 1365, 1713
FokI	GGATG	5 cut(s)	41, 524, 1109, 1265, 1764
Fsp4HI	GCNGC	7 cut(s)	98, 122, 312, 1161, 1362, 1365, 1713
FspBI	CTAG	4 cut(s)	198, 231, 624, 1652
GlaI	GCGC	4 cut(s)	57, 764, 1593, 1776
GluI	GCNGC	7 cut(s)	98, 122, 312, 1161, 1362, 1365, 1713
GsaI	CCCAGC	1 cut(s)	318
GsuI	CTGGAG	2 cut(s)	471, 1918
HaeII	RGCGCY	1 cut(s)	59
HaeIII	GGCC	3 cut(s)	33, 1468, 2111
HapII	CCGG	3 cut(s)	34, 62, 416
HhaI	GCGC	4 cut(s)	58, 765, 1594, 1777
Hin6I	GCGC	4 cut(s)	56, 763, 1592, 1775
HinP1I	GCGC	4 cut(s)	56, 763, 1592, 1775
HincII	GTYRAC	3 cut(s)	1501, 1600, 2123
HindII	GTYRAC	3 cut(s)	1501, 1600, 2123
HindIII	AAGCTT	2 cut(s)	1196, 1675
HpaII	CCGG	3 cut(s)	34, 62, 416
HphI	GGTGA	6 cut(s)	152, 278, 1540, 1805, 2086, 2246
Hpy188I	TCNGA	8 cut(s)	91, 115, 825, 1068, 1114, 1314, 1573, 1821
Hpy99I	CGWCG	1 cut(s)	1643
HpyCH4III	ACNGT	3 cut(s)	1569, 1855, 2221
HpyCH4IV	ACGT	2 cut(s)	921, 1479
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 317, 401, 473, 1160, 1361, 1550, 1589, 1718
HpyF3I	CTNAG	7 cut(s)	213, 822, 906, 994, 1130, 1868, 2172
HpySE526I	ACGT	2 cut(s)	921, 1479
HspAI	GCGC	4 cut(s)	56, 763, 1592, 1775
Kpn2I	TCCGGA	1 cut(s)	61
Ksp22I	TGATCA	1 cut(s)	870
Kzo9I	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
LguI	GCTCTTC	2 cut(s)	1068, 2199
LmnI	GCTCC	2 cut(s)	1396, 1417
Lsp1109I	GCAGC	6 cut(s)	109, 133, 323, 1172, 1348, 1351
LweI	GCATC	6 cut(s)	965, 1007, 1087, 1243, 1786, 2062
MaeI	CTAG	4 cut(s)	198, 231, 624, 1652
MaeII	ACGT	2 cut(s)	921, 1479
MaeIII	GTNAC	4 cut(s)	922, 1015, 1585, 1793
MalI	GATC	9 cut(s)	173, 270, 306, 651, 872, 992, 1111, 1311, 1922
MbiI	CCGCTC	1 cut(s)	1420
MboI	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
MfeI	CAATTG	1 cut(s)	1971
MflI	RGATCY	3 cut(s)	649, 990, 1309
MlsI	TGGCCA	1 cut(s)	1468
MluNI	TGGCCA	1 cut(s)	1468
MlyI	GAGTC	3 cut(s)	80, 182, 359
MmeI	TCCRAC	2 cut(s)	93, 139
Mox20I	TGGCCA	1 cut(s)	1468
Mph1103I	ATGCAT	1 cut(s)	741
MroI	TCCGGA	1 cut(s)	61
MroXI	GAANNNNTTC	1 cut(s)	1815
MscI	TGGCCA	1 cut(s)	1468
MseI	TTAA	6 cut(s)	534, 971, 987, 1383, 1979, 2102
MslI	CAYNNNNRTG	7 cut(s)	719, 836, 961, 1056, 1187, 1640, 1782
Msp20I	TGGCCA	1 cut(s)	1468
MspA1I	CMGCKG	3 cut(s)	100, 314, 2231
MspI	CCGG	3 cut(s)	34, 62, 416
MspR9I	CCNGG	3 cut(s)	35, 417, 1010
MunI	CAATTG	1 cut(s)	1971
Mva1269I	GAATGC	3 cut(s)	406, 478, 823
MvaI	CCWGG	1 cut(s)	1010
MvnI	CGCG	3 cut(s)	43, 879, 928
MwoI	GCNNNNNNNGC	9 cut(s)	53, 317, 401, 473, 1160, 1361, 1550, 1589, 1718
NciI	CCSGG	2 cut(s)	35, 417
NdeI	CATATG	1 cut(s)	1783
NdeII	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
NheI	GCTAGC	2 cut(s)	197, 623
NlaIV	GGNNCC	1 cut(s)	1402
NmuCI	GTSAC	2 cut(s)	922, 1793
NruI	TCGCGA	1 cut(s)	43
NsiI	ATGCAT	1 cut(s)	741
NspI	RCATGY	3 cut(s)	112, 718, 1160
NspV	TTCGAA	1 cut(s)	2184
PagI	TCATGA	1 cut(s)	1437
PciSI	GCTCTTC	2 cut(s)	1068, 2199
PcsI	WCGNNNNNNNCGW	1 cut(s)	464
PctI	GAATGC	3 cut(s)	406, 478, 823
PdmI	GAANNNNTTC	1 cut(s)	1815
PfeI	GAWTC	8 cut(s)	38, 261, 383, 826, 910, 1040, 1751, 2249
PflMI	CCANNNNNTGG	1 cut(s)	1294
PkrI	GCNGC	7 cut(s)	99, 123, 313, 1162, 1363, 1366, 1714
PleI	GAGTC	3 cut(s)	80, 182, 358
PpsI	GAGTC	3 cut(s)	80, 182, 358
PpuMI	RGGWCCY	1 cut(s)	1079
Psp5II	RGGWCCY	1 cut(s)	1079
Psp6I	CCWGG	1 cut(s)	1008
PspEI	GGTNACC	1 cut(s)	1015
PspFI	CCCAGC	1 cut(s)	314
PspGI	CCWGG	1 cut(s)	1008
PspN4I	GGNNCC	1 cut(s)	1402
PspPI	GGNCC	1 cut(s)	1079
PspPPI	RGGWCCY	1 cut(s)	1079
PsuI	RGATCY	3 cut(s)	649, 990, 1309
PvuII	CAGCTG	2 cut(s)	314, 2231
RruI	TCGCGA	1 cut(s)	43
RsaI	GTAC	3 cut(s)	81, 1409, 1889
RsaNI	GTAC	3 cut(s)	80, 1408, 1888
RseI	CAYNNNNRTG	7 cut(s)	719, 836, 961, 1056, 1187, 1640, 1782
SalI	GTCGAC	1 cut(s)	1598
SapI	GCTCTTC	2 cut(s)	1068, 2199
SaqAI	TTAA	6 cut(s)	534, 971, 987, 1383, 1979, 2102
SatI	GCNGC	7 cut(s)	98, 122, 312, 1161, 1362, 1365, 1713
Sau3AI	GATC	9 cut(s)	171, 268, 304, 649, 870, 990, 1109, 1309, 1920
Sau96I	GGNCC	1 cut(s)	1079
SchI	GAGTC	3 cut(s)	80, 182, 359
ScrFI	CCNGG	3 cut(s)	35, 417, 1010
SfaNI	GCATC	6 cut(s)	965, 1007, 1087, 1243, 1786, 2062
SfuI	TTCGAA	1 cut(s)	2184
SinI	GGWCC	1 cut(s)	1079
SmiMI	CAYNNNNRTG	7 cut(s)	719, 836, 961, 1056, 1187, 1640, 1782
SsiI	CCGC	7 cut(s)	100, 407, 879, 1085, 1420, 1712, 2072
SspI	AATATT	1 cut(s)	2048
SspMI	CTAG	4 cut(s)	198, 231, 624, 1652
StyD4I	CCNGG	3 cut(s)	33, 415, 1008
TaaI	ACNGT	3 cut(s)	1569, 1855, 2221
TaiI	ACGT	2 cut(s)	924, 1482
TaqI	TCGA	9 cut(s)	84, 257, 1043, 1599, 1919, 2031, 2056, 2085, 2184
TatI	WGTACW	2 cut(s)	1407, 1887
TauI	GCSGC	1 cut(s)	1715
TfiI	GAWTC	8 cut(s)	38, 261, 383, 826, 910, 1040, 1751, 2249
Tru1I	TTAA	6 cut(s)	534, 971, 987, 1383, 1979, 2102
Tru9I	TTAA	6 cut(s)	534, 971, 987, 1383, 1979, 2102
TscAI	CASTG	5 cut(s)	1134, 1348, 1476, 1546, 1572
TseFI	GTSAC	2 cut(s)	922, 1793
TseI	GCWGC	6 cut(s)	97, 121, 311, 1160, 1361, 1364
Tsp45I	GTSAC	2 cut(s)	922, 1793
TspGWI	ACGGA	3 cut(s)	41, 819, 1364
TspRI	CASTG	5 cut(s)	1134, 1348, 1476, 1546, 1572
Van91I	CCANNNNNTGG	1 cut(s)	1294
VpaK11BI	GGWCC	1 cut(s)	1079
XagI	CCTNNNNNAGG	1 cut(s)	135
XapI	RAATTY	6 cut(s)	322, 1004, 1032, 1897, 2158, 2196
XceI	RCATGY	3 cut(s)	112, 718, 1160
XcmI	CCANNNNNNNNNTGG	2 cut(s)	910, 1243
XmiI	GTMKAC	3 cut(s)	1455, 1536, 1599
XmnI	GAANNNNTTC	1 cut(s)	1815
XspI	CTAG	4 cut(s)	198, 231, 624, 1652
Zsp2I	ATGCAT	1 cut(s)	741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.