pycom02g11110

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7851586 .. 7853709
2124 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g11110.1

Sequence Viewer

Length: 2124 bp
ATGCACAAAATGACCTATTGCCTAGATGGAGCGGTCCTGTGTATGATCGATACGCAGGTCGTTGGTTTGGAAGGTGATGCGAGTAAGATCAAACAATGGTTATTTGAAGCTGACAAGGGCATACTAGCCATTGGAGTTGTGGGAATGGGTGGACTTGGCAAGACTACTATTGCTCAAAAAGTATTTAATGACAGGAAAATTGAGGAGCGCTTCGAAAGAAGAATTTGGGTATCGGTTTCTCAAAAATTCGATGAAGAACAAATCATGAGAAGTATTTTACGGAACTTGGGAGATGCTAGTGTAGGAGACGACAAGGGTGAATTATTGAAGAAGATAAATGAATATCTTTTAGGCAAGAGGTATTTGATTGTGATGGATGATGTGTGGAGCTTGGATGTTGCTTGGTGGCTTAGAATTTATGAAGCATTGCCAAAAGGAAATGGAAGTAGTGTCATCATTACTACGAGGATAGAGAAGGTTGCACAGAAGATGGGAGTGAAGGAAGCAAGATCACATTGGCCCAAATGCCTCAGCAAAGATGATAGTTGGCTGCTCTTTCGGAAGATTGCATTTGCGGCAAATGGAGGTGAGTGTATGTATCCAGAGCTAGAAAATGTTGGAAAGGAGATTGTTGAGAAGTGTAAGGGCCTTCCACTAGCAATCAAGGCGGTTGGAGGAATAATGCTTTGTAAACCATCGCGCTATCATGAGTGGAGGCGAATTGCAGACCATTTTCGTGATGAGTTAGCAGAAAATGATAACTCGGTTATGGCTTCTCTACAATTGAGTTACGATGAACTTCCATCTTACTTGAAGTCATGCTTCCTCTGCTTGTCACTTTACCCGGAGGATTGCATCATAGCCAAAGACCAGTTGGTCCATTGGTGGCTTGGAGAAGGTTTTATTCCTTTGAGAAGTGGTAGATCAGCAATTGCAGCAGGGGAAGATTGCTTCTCAGGGCTAACAAATCGATGTTTGCTAGAAGTGATCAACAAGACTTATCATGGAACAATCTCCACGTGTAAAATTCATGACATGGTACGCGATGTGGTGATAAAAATGGCGGATGATGATGCATTTTTCAGACCGGATGATAGAAATTGCCGCCATTTGGGCATTACAGGTAGTATGCTTCAGAAGGACAATCATAAGTTGAGAGCATTGTTGTCTACAACTAAGACCGGTGAAGTGAACAAGATTGCTTCACACACTGCAAAGAAATTTTGCAAGTCTAGATACCTTCGCGCAATGGATATTTCGAGGTCACTCTTCAGTATGCCTCTCTCTAGTCTTTTAAATCAGATTGGATTTTTGCAGCACCTAACTTACCTCAACTTAAGCAACACGCATCCATTGGTTCAACTCCCGCCTTCGCTCGACAAGCTTAACAACCTTCAGATATTGGATGTCAGCTACTGTCAAAACTTAAAGACATTGCCTCCCTGCATTGTGACATTCAAGAAGTTAAGGGTTTTAGACATAAGCAATTGCGGTTCGCTCAAATATCTACCTAAAGGCTTGGGAAGGCTTTCAAATCTTGAAGTGTTATCAGGATTCAAACCCGCCAAATCAAGCCAGTTAGAAGGTTGCAGGATCGGCGAGATCAGAAATTTAATTCGACTTAGGACACTCGGGCTTCAACTAACCTGCTCCGATGAGATTGGAGATACTGAGGTCAATGTGTTGATAAATCTACAAGAACTGCAGCATCTGTCAATAAGTTGTTTCGATAGTCAAAACAATGATGATCTCGTCACCAAGCTTGACAAGTTGTTCCCTCCTCAGCAGCTCCATGAGCTGAGTCTAAAGTTTTATCCCGGACAGATTAGTCCAGTCTGGCTCAATCCCATCTCGCTTCCTATTTTGAGGTACCTTTCGATATCATCAGGCAATCTTGAGAAGATGAATGAAAGGTTTTGGGGGCTTAATGACAATGCTGTTTGGAAAATTGAGGGCTTAATGTTGGAATCTCTTTCGGATTTCCACGAAGAATGGGCTAGGGTTGGACAAGTTATGCCGGCGTTAAGAGTTGTAATTGTAAGTTGGTGTCCGGAGTTGGTGTCTTTTCCGATTGAGGATGTCGGGTTTAGAGGTGGTGTCTGGAAGGAAGAAACGAAAACATGA

Protein Analysis

708

Amino Acids

80.01

Weight (kDa)

7.94

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 25 - 194 2.2e-47 NB-ARC domain
WHD_DRP PF23559 280 - 351 4.5e-16 Disease resistance protein Winged helix domain
LRR_14 PF23598 411 - 633 2.1e-31 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 534 - 635 2.3e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000540)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50950 AT3G50950
fragaria_vesca FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata RLG00000017001
rosa_multiflora Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 875, 1827
Acc36I ACCTGC 2 cut(s) 46, 1655
Acc65I GGTACC 1 cut(s) 1869
AccB1I GGYRCC 1 cut(s) 1869
AccBSI CCGCTC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 1169
AccII CGCG 3 cut(s) 700, 1044, 1245
AccIII TCCGGA 1 cut(s) 2050
AciI CCGC 8 cut(s) 32, 575, 668, 1064, 1105, 1367, 1491, 1563
AclWI GGATC 1 cut(s) 1601
AcsI RAATTY 6 cut(s) 222, 245, 414, 1026, 1220, 1609
AcuI CTGAAG 3 cut(s) 1118, 1255, 1379
AcvI CACGTG 1 cut(s) 1020
AfaI GTAC 2 cut(s) 1041, 1871
AfeI AGCGCT 1 cut(s) 209
AfiI CCNNNNNNNGG 1 cut(s) 1111
AflII CTTAAG 1 cut(s) 1336
AflIII ACRYGT 1 cut(s) 1019
AgeI ACCGGT 1 cut(s) 1181
AgsI TTSAA 9 cut(s) 107, 328, 814, 1361, 1459, 1533, 1541, 1558, 1640
AluBI AGCT 8 cut(s) 110, 390, 607, 1384, 1413, 1762, 1789, 1798
AluI AGCT 8 cut(s) 110, 390, 607, 1384, 1413, 1762, 1789, 1798
Alw26I GTCTC 1 cut(s) 300
AlwI GGATC 1 cut(s) 1601
AlwNI CAGNNNCTG 2 cut(s) 1416, 1711
Ama87I CYCGRG 1 cut(s) 1631
Aor13HI TCCGGA 1 cut(s) 2050
Aor51HI AGCGCT 1 cut(s) 209
AoxI GGCC 2 cut(s) 518, 646
ApeKI GCWGC 5 cut(s) 550, 935, 1315, 1705, 1786
ApoI RAATTY 6 cut(s) 222, 245, 414, 1026, 1220, 1609
AsiGI ACCGGT 1 cut(s) 1181
Asp700I GAANNNNTTC 1 cut(s) 1528
Asp718I GGTACC 1 cut(s) 1869
AspLEI GCGC 3 cut(s) 210, 702, 1247
AspS9I GGNCC 4 cut(s) 34, 519, 646, 877
AsuC2I CCSGG 2 cut(s) 845, 1818
AsuHPI GGTGA 6 cut(s) 86, 329, 599, 1063, 1196, 1747
AsuII TTCGAA 1 cut(s) 213
AvaI CYCGRG 1 cut(s) 1631
AvaII GGWCC 2 cut(s) 34, 877
BaeI ACNNNNGTAYC 4 cut(s) 42, 75, 1659, 1692
BanI GGYRCC 1 cut(s) 1869
BbrPI CACGTG 1 cut(s) 1020
BbvCI CCTCAGC 2 cut(s) 530, 1782
BbvI GCAGC 5 cut(s) 537, 947, 1327, 1717, 1798
BccI CCATC 6 cut(s) 20, 367, 484, 703, 811, 1856
BciVI GTATCC 1 cut(s) 609
BclI TGATCA 1 cut(s) 987
BcnI CCSGG 2 cut(s) 845, 1818
BcoDI GTCTC 1 cut(s) 300
BfaI CTAG 9 cut(s) 23, 125, 297, 608, 656, 980, 1233, 1287, 1998
BfmI CTRYAG 1 cut(s) 1703
BfoI RGCGCY 1 cut(s) 211
BfrI CTTAAG 1 cut(s) 1336
BfuAI ACCTGC 2 cut(s) 46, 1655
BfuI GTATCC 1 cut(s) 609
BglI GCCNNNNNGGC 1 cut(s) 1113
BisI GCNGC 7 cut(s) 551, 576, 936, 1105, 1316, 1706, 1787
BlsI GCNGC 7 cut(s) 552, 577, 937, 1106, 1317, 1707, 1788
Bme1390I CCNGG 2 cut(s) 845, 1818
Bme18I GGWCC 2 cut(s) 34, 877
BmeT110I CYCGRG 1 cut(s) 1631
BmgT120I GGNCC 4 cut(s) 34, 519, 646, 877
BmiI GGNNCC 1 cut(s) 1871
BmrFI CCNGG 2 cut(s) 845, 1818
BmsI GCATC 6 cut(s) 67, 283, 864, 1063, 1357, 1717
Bpu10I CCTNAGC 2 cut(s) 530, 1782
Bpu14I TTCGAA 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 1916
BpuMI CCSGG 2 cut(s) 845, 1818
Bsa29I ATCGAT 2 cut(s) 48, 970
BsaAI YACGTR 1 cut(s) 1020
BsaWI WCCGGW 3 cut(s) 1087, 1181, 2050
BsaXI ACNNNNNCTCC 4 cut(s) 1423, 1453, 2045, 2075
Bsc4I CCNNNNNNNGG 1 cut(s) 1111
Bse118I RCCGGY 2 cut(s) 1181, 2017
Bse1I ACTGG 3 cut(s) 871, 1576, 1832
Bse3DI GCAATG 3 cut(s) 425, 1254, 1433
BseAI TCCGGA 1 cut(s) 2050
BseCI ATCGAT 2 cut(s) 48, 970
BseGI GGATG 7 cut(s) 382, 400, 1072, 1096, 1348, 1411, 2083
BseLI CCNNNNNNNGG 1 cut(s) 1111
BseMI GCAATG 3 cut(s) 425, 1254, 1433
BseMII CTCAG 5 cut(s) 544, 969, 1662, 1790, 1796
BseNI ACTGG 3 cut(s) 871, 1576, 1832
BseRI GAGGAG 2 cut(s) 218, 1770
BseXI GCAGC 5 cut(s) 537, 947, 1327, 1717, 1798
Bsh1236I CGCG 3 cut(s) 700, 1044, 1245
BshFI GGCC 2 cut(s) 520, 648
BshNI GGYRCC 1 cut(s) 1869
BshTI ACCGGT 1 cut(s) 1181
BshVI ATCGAT 2 cut(s) 48, 970
BsiHKCI CYCGRG 1 cut(s) 1631
BsiSI CCGG 6 cut(s) 845, 1088, 1182, 1818, 2018, 2051
BslI CCNNNNNNNGG 1 cut(s) 1111
BsmAI GTCTC 1 cut(s) 300
BsmBI CGTCTC 1 cut(s) 300
BsnI GGCC 2 cut(s) 520, 648
BsoBI CYCGRG 1 cut(s) 1631
Bsp119I TTCGAA 1 cut(s) 213
Bsp13I TCCGGA 1 cut(s) 2050
Bsp143I GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
BspACI CCGC 8 cut(s) 32, 575, 668, 1064, 1105, 1367, 1491, 1563
BspANI GGCC 2 cut(s) 520, 648
BspCNI CTCAG 5 cut(s) 543, 968, 1663, 1791, 1795
BspDI ATCGAT 2 cut(s) 48, 970
BspEI TCCGGA 1 cut(s) 2050
BspFNI CGCG 3 cut(s) 700, 1044, 1245
BspHI TCATGA 3 cut(s) 264, 706, 1030
BspLI GGNNCC 1 cut(s) 1871
BspMAI CTGCAG 1 cut(s) 1707
BspMI ACCTGC 2 cut(s) 46, 1655
BspPI GGATC 1 cut(s) 1601
BspT104I TTCGAA 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 1869
BspTI CTTAAG 1 cut(s) 1336
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 3 cut(s) 425, 1254, 1433
BsrFI RCCGGY 2 cut(s) 1181, 2017
BsrI ACTGG 3 cut(s) 871, 1576, 1832
BssAI RCCGGY 2 cut(s) 1181, 2017
BssMI GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
Bst4CI ACNGT 1 cut(s) 1418
Bst6I CTCTTC 1 cut(s) 1274
BstAFI CTTAAG 1 cut(s) 1336
BstBAI YACGTR 1 cut(s) 1020
BstBI TTCGAA 1 cut(s) 213
BstC8I GCNNGC 1 cut(s) 2019
BstDEI CTNAG 8 cut(s) 410, 530, 955, 1176, 1622, 1671, 1782, 1799
BstF5I GGATG 7 cut(s) 382, 400, 1072, 1096, 1348, 1411, 2083
BstFNI CGCG 3 cut(s) 700, 1044, 1245
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 3 cut(s) 210, 702, 1247
BstKTI GATC 8 cut(s) 48, 90, 512, 926, 990, 1596, 1605, 1750
BstMAI GTCTC 1 cut(s) 300
BstMBI GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
BstMWI GCNNNNNNNGC 8 cut(s) 575, 665, 828, 935, 1113, 1381, 1596, 1795
BstSCI CCNGG 2 cut(s) 843, 1816
BstSFI CTRYAG 1 cut(s) 1703
BstUI CGCG 3 cut(s) 700, 1044, 1245
BstV1I GCAGC 5 cut(s) 537, 947, 1327, 1717, 1798
Bsu15I ATCGAT 2 cut(s) 48, 970
BsuI GTATCC 1 cut(s) 609
BsuRI GGCC 2 cut(s) 520, 648
BsuTUI ATCGAT 2 cut(s) 48, 970
BtgZI GCGATG 2 cut(s) 681, 1059
BtsCI GGATG 7 cut(s) 382, 400, 1072, 1096, 1348, 1411, 2083
BtsI GCAGTG 1 cut(s) 1209
BtsIMutI CAGTG 1 cut(s) 1209
BveI ACCTGC 2 cut(s) 46, 1655
Cac8I GCNNGC 1 cut(s) 2019
CaiI CAGNNNCTG 2 cut(s) 1416, 1711
CciI TCATGA 3 cut(s) 264, 706, 1030
CfoI GCGC 3 cut(s) 210, 702, 1247
Cfr10I RCCGGY 2 cut(s) 1181, 2017
Cfr13I GGNCC 4 cut(s) 34, 519, 646, 877
ClaI ATCGAT 2 cut(s) 48, 970
Csp6I GTAC 2 cut(s) 1040, 1870
CspAI ACCGGT 1 cut(s) 1181
CviAII CATG 8 cut(s) 265, 707, 819, 1004, 1031, 1036, 1793, 2121
CviQI GTAC 2 cut(s) 1040, 1870
DdeI CTNAG 8 cut(s) 410, 530, 955, 1176, 1622, 1671, 1782, 1799
DpnI GATC 8 cut(s) 47, 89, 511, 925, 989, 1595, 1604, 1749
DpnII GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
DraI TTTAAA 1 cut(s) 1296
DrdI GACNNNNNNGTC 2 cut(s) 875, 1827
DseDI GACNNNNNNGTC 2 cut(s) 875, 1827
Eam1104I CTCTTC 1 cut(s) 1274
EarI CTCTTC 1 cut(s) 1274
EciI GGCGGA 1 cut(s) 1079
Eco32I GATATC 1 cut(s) 1881
Eco47I GGWCC 2 cut(s) 34, 877
Eco47III AGCGCT 1 cut(s) 209
Eco57I CTGAAG 3 cut(s) 1118, 1255, 1379
Eco72I CACGTG 1 cut(s) 1020
Eco88I CYCGRG 1 cut(s) 1631
EcoO109I RGGNCCY 1 cut(s) 646
EcoRV GATATC 1 cut(s) 1881
EcoT22I ATGCAT 1 cut(s) 1078
Esp3I CGTCTC 1 cut(s) 300
FaeI CATG 8 cut(s) 268, 710, 822, 1007, 1034, 1039, 1796, 2124
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FatI CATG 8 cut(s) 264, 706, 818, 1003, 1030, 1035, 1792, 2120
FauI CCCGC 2 cut(s) 1374, 1570
FbaI TGATCA 1 cut(s) 987
FblI GTMKAC 1 cut(s) 1169
Fnu4HI GCNGC 7 cut(s) 551, 576, 936, 1105, 1316, 1706, 1787
FokI GGATG 7 cut(s) 389, 407, 1079, 1103, 1335, 1418, 2090
Fsp4HI GCNGC 7 cut(s) 551, 576, 936, 1105, 1316, 1706, 1787
FspBI CTAG 9 cut(s) 23, 125, 297, 608, 656, 980, 1233, 1287, 1998
GlaI GCGC 3 cut(s) 209, 701, 1246
GluI GCNGC 7 cut(s) 551, 576, 936, 1105, 1316, 1706, 1787
HaeII RGCGCY 1 cut(s) 211
HaeIII GGCC 2 cut(s) 520, 648
HapII CCGG 6 cut(s) 845, 1088, 1182, 1818, 2018, 2051
HhaI GCGC 3 cut(s) 210, 702, 1247
Hin1II CATG 8 cut(s) 268, 710, 822, 1007, 1034, 1039, 1796, 2124
Hin6I GCGC 3 cut(s) 208, 700, 1245
HinP1I GCGC 3 cut(s) 208, 700, 1245
HindIII AAGCTT 2 cut(s) 1382, 1760
HinfI GANTC 3 cut(s) 1554, 1801, 1967
HpaII CCGG 6 cut(s) 845, 1088, 1182, 1818, 2018, 2051
HphI GGTGA 6 cut(s) 86, 329, 599, 1063, 1196, 1747
Hpy166II GTNNAC 4 cut(s) 152, 692, 1170, 1192
Hpy188I TCNGA 9 cut(s) 561, 1085, 1137, 1302, 1398, 1607, 1654, 1978, 2070
Hpy8I GTNNAC 4 cut(s) 152, 692, 1170, 1192
HpyCH4III ACNGT 1 cut(s) 1418
HpyCH4IV ACGT 1 cut(s) 1019
HpyF10VI GCNNNNNNNGC 8 cut(s) 575, 665, 828, 935, 1113, 1381, 1596, 1795
HpyF3I CTNAG 8 cut(s) 410, 530, 955, 1176, 1622, 1671, 1782, 1799
HpySE526I ACGT 1 cut(s) 1019
Hsp92II CATG 8 cut(s) 268, 710, 822, 1007, 1034, 1039, 1796, 2124
HspAI GCGC 3 cut(s) 208, 700, 1245
Kpn2I TCCGGA 1 cut(s) 2050
KpnI GGTACC 1 cut(s) 1873
KroI GCCGGC 1 cut(s) 2017
KroNI GCCGGC 1 cut(s) 2019
Ksp22I TGATCA 1 cut(s) 987
Kzo9I GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
LmnI GCTCC 5 cut(s) 29, 205, 387, 1655, 1794
Lsp1109I GCAGC 5 cut(s) 537, 947, 1327, 1717, 1798
LweI GCATC 6 cut(s) 67, 283, 864, 1063, 1357, 1717
MaeI CTAG 9 cut(s) 23, 125, 297, 608, 656, 980, 1233, 1287, 1998
MaeII ACGT 1 cut(s) 1019
MaeIII GTNAC 5 cut(s) 788, 834, 1263, 1450, 1753
MalI GATC 8 cut(s) 47, 89, 511, 925, 989, 1595, 1604, 1749
MbiI CCGCTC 1 cut(s) 32
MboI GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
MfeI CAATTG 3 cut(s) 782, 930, 1486
MlyI GAGTC 1 cut(s) 1810
MmeI TCCRAC 4 cut(s) 598, 652, 1944, 1984
Mph1103I ATGCAT 1 cut(s) 1078
MroI TCCGGA 1 cut(s) 2050
MroNI GCCGGC 1 cut(s) 2017
MroXI GAANNNNTTC 1 cut(s) 1528
MslI CAYNNNNRTG 1 cut(s) 735
MspCI CTTAAG 1 cut(s) 1336
MspI CCGG 6 cut(s) 845, 1088, 1182, 1818, 2018, 2051
MspR9I CCNGG 2 cut(s) 845, 1818
MunI CAATTG 3 cut(s) 782, 930, 1486
MvnI CGCG 3 cut(s) 700, 1044, 1245
MwoI GCNNNNNNNGC 8 cut(s) 575, 665, 828, 935, 1113, 1381, 1596, 1795
NaeI GCCGGC 1 cut(s) 2019
NciI CCSGG 2 cut(s) 845, 1818
NdeII GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
NgoMIV GCCGGC 1 cut(s) 2017
NlaIII CATG 8 cut(s) 268, 710, 822, 1007, 1034, 1039, 1796, 2124
NlaIV GGNNCC 1 cut(s) 1871
NmuCI GTSAC 4 cut(s) 834, 1263, 1450, 1753
NsiI ATGCAT 1 cut(s) 1078
NspV TTCGAA 1 cut(s) 213
PagI TCATGA 3 cut(s) 264, 706, 1030
PdiI GCCGGC 1 cut(s) 2019
PdmI GAANNNNTTC 1 cut(s) 1528
PfeI GAWTC 2 cut(s) 1554, 1967
PfoI TCCNGGA 1 cut(s) 1816
PinAI ACCGGT 1 cut(s) 1181
PkrI GCNGC 7 cut(s) 552, 577, 937, 1106, 1317, 1707, 1788
PleI GAGTC 1 cut(s) 1809
PmaCI CACGTG 1 cut(s) 1020
PmlI CACGTG 1 cut(s) 1020
PpsI GAGTC 1 cut(s) 1809
Ppu21I YACGTR 1 cut(s) 1020
PspCI CACGTG 1 cut(s) 1020
PspN4I GGNNCC 1 cut(s) 1871
PspPI GGNCC 4 cut(s) 34, 519, 646, 877
PstI CTGCAG 1 cut(s) 1707
PstNI CAGNNNCTG 2 cut(s) 1416, 1711
RsaI GTAC 2 cut(s) 1041, 1871
RsaNI GTAC 2 cut(s) 1040, 1870
RseI CAYNNNNRTG 1 cut(s) 735
SatI GCNGC 7 cut(s) 551, 576, 936, 1105, 1316, 1706, 1787
Sau3AI GATC 8 cut(s) 45, 87, 509, 923, 987, 1593, 1602, 1747
Sau96I GGNCC 4 cut(s) 34, 519, 646, 877
SchI GAGTC 1 cut(s) 1810
ScrFI CCNGG 2 cut(s) 845, 1818
SfaNI GCATC 6 cut(s) 67, 283, 864, 1063, 1357, 1717
SfcI CTRYAG 1 cut(s) 1703
SfuI TTCGAA 1 cut(s) 213
SinI GGWCC 2 cut(s) 34, 877
SmiMI CAYNNNNRTG 1 cut(s) 735
SmlI CTYRAG 2 cut(s) 1336, 1895
SmoI CTYRAG 2 cut(s) 1336, 1895
SsiI CCGC 8 cut(s) 32, 575, 668, 1064, 1105, 1367, 1491, 1563
SspMI CTAG 9 cut(s) 23, 125, 297, 608, 656, 980, 1233, 1287, 1998
StyD4I CCNGG 2 cut(s) 843, 1816
TaaI ACNGT 1 cut(s) 1418
TaiI ACGT 1 cut(s) 1022
TaqI TCGA 9 cut(s) 48, 213, 249, 970, 1259, 1377, 1618, 1728, 1877
TauI GCSGC 2 cut(s) 578, 1107
TfiI GAWTC 2 cut(s) 1554, 1967
TscAI CASTG 1 cut(s) 1216
TseFI GTSAC 4 cut(s) 834, 1263, 1450, 1753
TseI GCWGC 5 cut(s) 550, 935, 1315, 1705, 1786
Tsp45I GTSAC 4 cut(s) 834, 1263, 1450, 1753
TspDTI ATGAA 7 cut(s) 267, 354, 435, 810, 1019, 1919, 1923
TspGWI ACGGA 1 cut(s) 295
TspRI CASTG 1 cut(s) 1216
Vha464I CTTAAG 1 cut(s) 1336
VpaK11BI GGWCC 2 cut(s) 34, 877
XapI RAATTY 6 cut(s) 222, 245, 414, 1026, 1220, 1609
XbaI TCTAGA 1 cut(s) 1232
XcmI CCANNNNNNNNNTGG 3 cut(s) 136, 871, 887
XmiI GTMKAC 1 cut(s) 1169
XmnI GAANNNNTTC 1 cut(s) 1528
XspI CTAG 9 cut(s) 23, 125, 297, 608, 656, 980, 1233, 1287, 1998
Zsp2I ATGCAT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.