Rmu_sc0001706.1_g000009

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001706.1
OG0000540
Physical Location & Seq
Reverse (-)
38865 .. 41360
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001706.1_g000009.1.cds

Sequence Viewer

Length: 2496 bp
atggtccagactctaacgcagcaagtgttcacagctctaatgaaccaggctgaatttgcactcgacttcagcggccagtttgagcagttgaagacagggcttgatctcaccaaggccttacttgcagacacggagagtctcaaccacaagaacaacactgtcaaggcagcattgtttgacttaagggaagtcatctacaaagcagacgatgtactcactgattgcttggttagagatgaatacagaaaggatggatcttgttccggttcctggcttcacgatccattcttcctgcatcgtacaggaaagaaattgagagacatcaatttgcgtatgaaggagatagagaagaccttgggccggtttttgagggcaccagacagcatccatagagaagatgcataccaagttagagtgatggtgtcacaagactggaatccaactgagataattgggttggatagcgatgtggagaagattaagggttggattttcgacaccagcaagttacttcaccacgtaggcattgtgggaatgggaggcctcgggaaaaccaccattgctcaaaagatatttcatgatctagaagtagtaggccactttcacaagctgatatgggtgtgtgtttcgcggtcattcagcgctgagcggattatgaggagaatcctagaaggtctaggagaaaatgtctctggagccggggttactcagattttgagcagaattcagcaagtacttaaagataagagctgtttgattgtcatggatgatgtgtggaatcacacagaatttgattggtggaccaatctctgctccgttatacccaaacaaagcagctgcatcatagttacaactagaaatgaagaagctgcaattggtatgggagttgaaagctcacgaatccaccgtcccaagactcttaatgatgaggaaagctggtgtttattctccaagtttgcatttcctacaagcaggggattgtgtctggaggactggattgataaattaggaaaagaactcttgaagaagtgtggtggactcccgcttgcaatcaagactataggatccttgttggcatcaaagatcgactccccttctaagtggaggcgagttctagagagctttcatgctttgacaaccgagggaaaaactagctcagttatggcctctttgcgattgagctatgatgaactcccgcctggtctgaagcaatgcctgctgtgtttctccatctatcctgaagactatgagatacgtgctgatcagttaatccactggtggattggagaaggtttcgtgcaaagcaaaggctcaaggccagcagcagaagtgggatatgagtatctcgcggaactaatcagcagatgcttggttgaaattgtgcagaggagaggatttgatgggagagtctacaagtgcaagatacacgatatggtgcgggaactgataataatgattgcagaggaagaggaattttgcggctttgacgaacgaggcagacagaaattgacagcaaagactaggtggttatgctttattgatgaaatggaggagaagtccttgaaacgtagttcaaagctcagggcattgttgctgatgtcaagccgcagatttgactttgaaaggaattcggggtttctgcgatccctcagaatgttggatctatcaaactgcactgtggatgagcattgtgtggaggatctcttcagctggatcagctctcttaagcgcttggcatctctgaacttaagtggtattcaagccctgaaagaagtgccctcttcaattcataaactcctcaacctccaaattttacttttaacaggttgcagcaatctagtaaaaatacacccttccatcactaatttgaagaagctgattattttggacctaggctggtgtccaatccaatacttgcctccgggattgggaaggctttcttatcttcaggagctctccggattcaaggttgtgagtcagcctagaaagccaagtttccagcttcttgagattagggaattgatcaacctgagagtactgcgtatacatgtaagcagtaccacagttatcgcagacaatgaacttgatgtcctctctcagcttagaaggctcaatgttctagctattgatgcagaagattgtagaaataacaatgttttggaaatgctagaaggcctgacccctcctccaagcctccaagagctgtatctcaggaattacaagaaggaaactctacccaactgggttaatcctggacaactttcacgattgctgtatctttgcatcgagaatggtgaccttgtcaagctaagcagtggtcaaaccacctggaatcttgaaggcctgtgtctcaagtacttgatgaggctagaggtagactggaaggacttggagaaggatatgcctgtacttcactacatggagatcagtcattgttacaacttgacagatttcccatgttcggttatggaacctggggtctggagaaagcattaa

Protein Analysis

831

Amino Acids

95.1

Weight (kDa)

6.88

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000540)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50950 AT3G50950
fragaria_vesca FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata RLG00000017001
rosa_multiflora Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 373
AccBSI CCGCTC 1 cut(s) 649
AccI GTMKAC 3 cut(s) 1410, 2044, 2376
AccII CGCG 2 cut(s) 631, 1349
AccIII TCCGGA 1 cut(s) 1958
AciI CCGC 9 cut(s) 72, 631, 649, 1043, 1196, 1349, 1438, 1479, 1606
AclWI GGATC 8 cut(s) 262, 275, 1059, 1072, 1638, 1668, 1707, 1721
AcoI YGGCCR 1 cut(s) 73
AcsI RAATTY 6 cut(s) 53, 723, 788, 1472, 1627, 1809
AcuI CTGAAG 5 cut(s) 52, 1226, 1260, 1690, 1931
AfaI GTAC 7 cut(s) 213, 301, 735, 2037, 2059, 2357, 2409
AfeI AGCGCT 2 cut(s) 643, 1730
AfiI CCNNNNNNNGG 4 cut(s) 270, 360, 1928, 2461
AflII CTTAAG 3 cut(s) 181, 1724, 1747
AflIII ACRYGT 1 cut(s) 2047
AjnI CCWGG 6 cut(s) 45, 269, 1198, 2251, 2327, 2473
AjuI GAANNNNNNNTTGG 2 cut(s) 858, 890
AloI GAACNNNNNNTCC 2 cut(s) 2073, 2105
Alw21I GWGCWC 1 cut(s) 1956
Alw26I GTCTC 4 cut(s) 143, 312, 694, 2354
AlwI GGATC 8 cut(s) 262, 275, 1059, 1072, 1638, 1668, 1707, 1721
Ama87I CYCGRG 1 cut(s) 545
Aor13HI TCCGGA 1 cut(s) 1958
Aor51HI AGCGCT 2 cut(s) 643, 1730
AoxI GGCC 9 cut(s) 73, 114, 358, 541, 595, 1164, 1316, 2173, 2341
ApeKI GCWGC 7 cut(s) 19, 167, 834, 837, 869, 1322, 1830
ApoI RAATTY 6 cut(s) 53, 723, 788, 1472, 1627, 1809
ArsI GACNNNNNNTTYG 2 cut(s) 892, 924
Asp700I GAANNNNTTC 1 cut(s) 1936
AspA2I CCTAGG 1 cut(s) 1891
AspLEI GCGC 2 cut(s) 644, 1731
AspS9I GGNCC 4 cut(s) 4, 358, 801, 1888
AsuC2I CCSGG 2 cut(s) 700, 1923
AsuHPI GGTGA 3 cut(s) 100, 506, 2306
AvaI CYCGRG 1 cut(s) 545
AvaII GGWCC 3 cut(s) 4, 801, 1888
AvrII CCTAGG 1 cut(s) 1891
BaeGI GKGCMC 2 cut(s) 376, 1779
BamHI GGATCC 1 cut(s) 1064
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 1956
BbsI GAAGAC 3 cut(s) 98, 356, 1248
Bbv12I GWGCWC 1 cut(s) 1956
BbvI GCAGC 7 cut(s) 31, 179, 824, 846, 856, 1334, 1842
BccI CCATC 5 cut(s) 245, 412, 1238, 1394, 1865
BciT130I CCWGG 6 cut(s) 47, 271, 1200, 2253, 2329, 2475
BclI TGATCA 2 cut(s) 1261, 2022
BcnI CCSGG 2 cut(s) 700, 1923
BcoDI GTCTC 4 cut(s) 143, 312, 694, 2354
BfmI CTRYAG 1 cut(s) 1059
BfoI RGCGCY 2 cut(s) 645, 1732
BfrI CTTAAG 3 cut(s) 181, 1724, 1747
BlnI CCTAGG 1 cut(s) 1891
BlpI GCTNAGC 2 cut(s) 645, 2309
BmcAI AGTACT 3 cut(s) 735, 2037, 2357
Bme1390I CCNGG 8 cut(s) 47, 271, 700, 1200, 1923, 2253, 2329, 2475
Bme18I GGWCC 3 cut(s) 4, 801, 1888
BmeT110I CYCGRG 1 cut(s) 545
BmgT120I GGNCC 4 cut(s) 4, 358, 801, 1888
BmiI GGNNCC 5 cut(s) 268, 375, 697, 1066, 2472
BmrFI CCNGG 8 cut(s) 47, 271, 700, 1200, 1923, 2253, 2329, 2475
BmrI ACTGGG 1 cut(s) 2251
BmsI GCATC 9 cut(s) 304, 388, 393, 849, 1085, 1355, 1745, 2119, 2292
BmuI ACTGGG 1 cut(s) 2251
BpiI GAAGAC 3 cut(s) 98, 356, 1248
BpmI CTGGAG 2 cut(s) 714, 1007
Bpu10I CCTNAGC 1 cut(s) 1580
Bpu1102I GCTNAGC 2 cut(s) 645, 2309
BpuEI CTTGAG 3 cut(s) 1297, 2027, 2336
BpuMI CCSGG 2 cut(s) 700, 1923
BsaAI YACGTR 2 cut(s) 520, 1256
BsaJI CCNNGG 7 cut(s) 111, 354, 544, 699, 1140, 1891, 2474
BsaWI WCCGGW 2 cut(s) 263, 1958
BsaXI ACNNNNNCTCC 8 cut(s) 672, 687, 702, 717, 1541, 1571, 2170, 2200
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 360, 1928, 2461
Bse118I RCCGGY 1 cut(s) 360
Bse1I ACTGG 6 cut(s) 76, 437, 998, 1280, 2246, 2384
Bse3DI GCAATG 2 cut(s) 558, 1217
BseAI TCCGGA 1 cut(s) 1958
BseBI CCWGG 6 cut(s) 47, 271, 1200, 2253, 2329, 2475
BseDI CCNNGG 7 cut(s) 111, 354, 544, 699, 1140, 1891, 2474
BseGI GGATG 4 cut(s) 256, 384, 772, 1687
BseLI CCNNNNNNNGG 4 cut(s) 270, 360, 1928, 2461
BseMI GCAATG 2 cut(s) 558, 1217
BseMII CTCAG 9 cut(s) 435, 636, 722, 1170, 1594, 1663, 2021, 2111, 2224
BseNI ACTGG 6 cut(s) 76, 437, 998, 1280, 2246, 2384
BseRI GAGGAG 5 cut(s) 673, 1402, 1565, 1787, 2175
BseSI GKGCMC 2 cut(s) 376, 1779
BseXI GCAGC 7 cut(s) 31, 179, 824, 846, 856, 1334, 1842
BsgI GTGCAG 2 cut(s) 1403, 1657
Bsh1236I CGCG 2 cut(s) 631, 1349
BshFI GGCC 9 cut(s) 75, 116, 360, 543, 597, 1166, 1318, 2175, 2343
BshNI GGYRCC 1 cut(s) 373
BsiHKAI GWGCWC 1 cut(s) 1956
BsiHKCI CYCGRG 1 cut(s) 545
BsiSI CCGG 5 cut(s) 264, 361, 699, 1922, 1959
BslFI GGGAC 1 cut(s) 894
BslI CCNNNNNNNGG 4 cut(s) 270, 360, 1928, 2461
BsmAI GTCTC 4 cut(s) 143, 312, 694, 2354
BsmFI GGGAC 1 cut(s) 894
BsnI GGCC 9 cut(s) 75, 116, 360, 543, 597, 1166, 1318, 2175, 2343
BsoBI CYCGRG 1 cut(s) 545
Bsp1286I GDGCHC 3 cut(s) 376, 1779, 1956
Bsp13I TCCGGA 1 cut(s) 1958
Bsp1720I GCTNAGC 2 cut(s) 645, 2309
BspACI CCGC 9 cut(s) 72, 631, 649, 1043, 1196, 1349, 1438, 1479, 1606
BspANI GGCC 9 cut(s) 75, 116, 360, 543, 597, 1166, 1318, 2175, 2343
BspCNI CTCAG 9 cut(s) 436, 637, 721, 1169, 1593, 1662, 2022, 2110, 2223
BspEI TCCGGA 1 cut(s) 1958
BspFNI CGCG 2 cut(s) 631, 1349
BspHI TCATGA 1 cut(s) 577
BspLI GGNNCC 5 cut(s) 268, 375, 697, 1066, 2472
BspPI GGATC 8 cut(s) 262, 275, 1059, 1072, 1638, 1668, 1707, 1721
BspT107I GGYRCC 1 cut(s) 373
BspTI CTTAAG 3 cut(s) 181, 1724, 1747
BsrBI CCGCTC 1 cut(s) 649
BsrDI GCAATG 2 cut(s) 558, 1217
BsrFI RCCGGY 1 cut(s) 360
BsrI ACTGG 6 cut(s) 76, 437, 998, 1280, 2246, 2384
BssAI RCCGGY 1 cut(s) 360
BssECI CCNNGG 7 cut(s) 111, 354, 544, 699, 1140, 1891, 2474
BssNAI GTATAC 1 cut(s) 2045
BssT1I CCWWGG 3 cut(s) 111, 354, 1891
Bst1107I GTATAC 1 cut(s) 2045
Bst2UI CCWGG 6 cut(s) 47, 271, 1200, 2253, 2329, 2475
Bst4CI ACNGT 4 cut(s) 160, 908, 1678, 2065
Bst6I CTCTTC 3 cut(s) 1461, 1709, 1786
BstAFI CTTAAG 3 cut(s) 181, 1724, 1747
BstAPI GCANNNNNTGC 1 cut(s) 1216
BstBAI YACGTR 2 cut(s) 520, 1256
BstC8I GCNNGC 3 cut(s) 1047, 1217, 1320
BstEII GGTNACC 1 cut(s) 2294
BstF5I GGATG 4 cut(s) 256, 384, 772, 1687
BstFNI CGCG 2 cut(s) 631, 1349
BstH2I RGCGCY 2 cut(s) 645, 1732
BstHHI GCGC 2 cut(s) 644, 1731
BstMAI GTCTC 4 cut(s) 143, 312, 694, 2354
BstMWI GCNNNNNNNGC 7 cut(s) 56, 122, 1216, 1716, 1987, 2107, 2129
BstNI CCWGG 6 cut(s) 47, 271, 1200, 2253, 2329, 2475
BstNSI RCATGY 1 cut(s) 2051
BstPI GGTNACC 1 cut(s) 2294
BstSCI CCNGG 8 cut(s) 45, 269, 698, 1198, 1921, 2251, 2327, 2473
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 376, 1779
BstUI CGCG 2 cut(s) 631, 1349
BstV1I GCAGC 7 cut(s) 31, 179, 824, 846, 856, 1334, 1842
BstV2I GAAGAC 3 cut(s) 98, 356, 1248
BstX2I RGATCY 4 cut(s) 254, 1064, 1660, 1699
BstYI RGATCY 4 cut(s) 254, 1064, 1660, 1699
BstZ17I GTATAC 1 cut(s) 2045
BsuRI GGCC 9 cut(s) 75, 116, 360, 543, 597, 1166, 1318, 2175, 2343
BtgZI GCGATG 1 cut(s) 480
BtsCI GGATG 4 cut(s) 256, 384, 772, 1687
BtsI GCAGTG 1 cut(s) 2320
BtsIMutI CAGTG 5 cut(s) 156, 216, 1273, 1674, 2320
Cac8I GCNNGC 3 cut(s) 1047, 1217, 1320
CciI TCATGA 1 cut(s) 577
CfoI GCGC 2 cut(s) 644, 1731
Cfr10I RCCGGY 1 cut(s) 360
Cfr13I GGNCC 4 cut(s) 4, 358, 801, 1888
Csp6I GTAC 7 cut(s) 212, 300, 734, 2036, 2058, 2356, 2408
CviAII CATG 6 cut(s) 578, 763, 1127, 2048, 2419, 2457
CviQI GTAC 7 cut(s) 212, 300, 734, 2036, 2058, 2356, 2408
EaeI YGGCCR 1 cut(s) 73
Eam1104I CTCTTC 3 cut(s) 1461, 1709, 1786
EarI CTCTTC 3 cut(s) 1461, 1709, 1786
Ecl136II GAGCTC 1 cut(s) 1954
Eco130I CCWWGG 3 cut(s) 111, 354, 1891
Eco147I AGGCCT 4 cut(s) 116, 543, 2175, 2343
Eco24I GRGCYC 1 cut(s) 1956
Eco47I GGWCC 3 cut(s) 4, 801, 1888
Eco47III AGCGCT 2 cut(s) 643, 1730
Eco53kI GAGCTC 1 cut(s) 1954
Eco57I CTGAAG 5 cut(s) 52, 1226, 1260, 1690, 1931
Eco88I CYCGRG 1 cut(s) 545
Eco91I GGTNACC 1 cut(s) 2294
EcoICRI GAGCTC 1 cut(s) 1954
EcoO65I GGTNACC 1 cut(s) 2294
EcoRI GAATTC 2 cut(s) 723, 1627
EcoRII CCWGG 6 cut(s) 45, 269, 1198, 2251, 2327, 2473
EcoT14I CCWWGG 3 cut(s) 111, 354, 1891
EcoT22I ATGCAT 1 cut(s) 403
EcoT38I GRGCYC 1 cut(s) 1956
ErhI CCWWGG 3 cut(s) 111, 354, 1891
FaeI CATG 6 cut(s) 581, 766, 1130, 2051, 2422, 2460
FalI AAGNNNNNCTT 2 cut(s) 1924, 1956
FaqI GGGAC 1 cut(s) 894
FatI CATG 6 cut(s) 577, 762, 1126, 2047, 2418, 2456
FauI CCCGC 3 cut(s) 1050, 1203, 1431
FbaI TGATCA 2 cut(s) 1261, 2022
FblI GTMKAC 3 cut(s) 1410, 2044, 2376
FokI GGATG 4 cut(s) 263, 371, 779, 1694
FriOI GRGCYC 1 cut(s) 1956
GlaI GCGC 2 cut(s) 643, 1730
GsuI CTGGAG 2 cut(s) 714, 1007
HaeII RGCGCY 2 cut(s) 645, 1732
HaeIII GGCC 9 cut(s) 75, 116, 360, 543, 597, 1166, 1318, 2175, 2343
HapII CCGG 5 cut(s) 264, 361, 699, 1922, 1959
HhaI GCGC 2 cut(s) 644, 1731
Hin1II CATG 6 cut(s) 581, 766, 1130, 2051, 2422, 2460
Hin6I GCGC 2 cut(s) 642, 1729
HinP1I GCGC 2 cut(s) 642, 1729
HpaII CCGG 5 cut(s) 264, 361, 699, 1922, 1959
HphI GGTGA 3 cut(s) 100, 506, 2306
Hpy166II GTNNAC 6 cut(s) 30, 801, 1037, 1411, 2045, 2377
Hpy188I TCNGA 4 cut(s) 711, 1206, 1652, 1743
Hpy8I GTNNAC 6 cut(s) 30, 801, 1037, 1411, 2045, 2377
HpyCH4III ACNGT 4 cut(s) 160, 908, 1678, 2065
HpyCH4IV ACGT 3 cut(s) 519, 1255, 1567
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 122, 1216, 1716, 1987, 2107, 2129
HpySE526I ACGT 3 cut(s) 519, 1255, 1567
Hsp92II CATG 6 cut(s) 581, 766, 1130, 2051, 2422, 2460
HspAI GCGC 2 cut(s) 642, 1729
Kpn2I TCCGGA 1 cut(s) 1958
Ksp22I TGATCA 2 cut(s) 1261, 2022
LmnI GCTCC 3 cut(s) 695, 818, 1951
Lsp1109I GCAGC 7 cut(s) 31, 179, 824, 846, 856, 1334, 1842
LweI GCATC 9 cut(s) 304, 388, 393, 849, 1085, 1355, 1745, 2119, 2292
MaeII ACGT 3 cut(s) 519, 1255, 1567
MaeIII GTNAC 6 cut(s) 423, 507, 703, 847, 2294, 2435
MbiI CCGCTC 1 cut(s) 649
MfeI CAATTG 1 cut(s) 873
MflI RGATCY 4 cut(s) 254, 1064, 1660, 1699
MhlI GDGCHC 3 cut(s) 376, 1779, 1956
MlyI GAGTC 7 cut(s) 4, 145, 910, 1032, 1082, 1416, 1984
MmeI TCCRAC 4 cut(s) 438, 464, 467, 1638
Mph1103I ATGCAT 1 cut(s) 403
MroI TCCGGA 1 cut(s) 1958
MroXI GAANNNNTTC 1 cut(s) 1936
MspA1I CMGCKG 3 cut(s) 72, 837, 1710
MspCI CTTAAG 3 cut(s) 181, 1724, 1747
MspI CCGG 5 cut(s) 264, 361, 699, 1922, 1959
MspR9I CCNGG 8 cut(s) 47, 271, 700, 1200, 1923, 2253, 2329, 2475
MunI CAATTG 1 cut(s) 873
MvaI CCWGG 6 cut(s) 47, 271, 1200, 2253, 2329, 2475
MvnI CGCG 2 cut(s) 631, 1349
MwoI GCNNNNNNNGC 7 cut(s) 56, 122, 1216, 1716, 1987, 2107, 2129
NciI CCSGG 2 cut(s) 700, 1923
NlaIII CATG 6 cut(s) 581, 766, 1130, 2051, 2422, 2460
NlaIV GGNNCC 5 cut(s) 268, 375, 697, 1066, 2472
NmuCI GTSAC 2 cut(s) 423, 2294
NsiI ATGCAT 1 cut(s) 403
NspI RCATGY 1 cut(s) 2051
PagI TCATGA 1 cut(s) 577
PceI AGGCCT 4 cut(s) 116, 543, 2175, 2343
PciI ACATGT 1 cut(s) 2047
PcsI WCGNNNNNNNCGW 1 cut(s) 904
PdmI GAANNNNTTC 1 cut(s) 1936
PfeI GAWTC 6 cut(s) 436, 663, 778, 900, 1962, 2332
PflFI GACNNNGTC 1 cut(s) 2300
PfoI TCCNGGA 2 cut(s) 1921, 2251
PleI GAGTC 7 cut(s) 4, 144, 910, 1032, 1082, 1415, 1983
PpsI GAGTC 7 cut(s) 4, 144, 910, 1032, 1082, 1415, 1983
Ppu21I YACGTR 2 cut(s) 520, 1256
PscI ACATGT 1 cut(s) 2047
Psp124BI GAGCTC 1 cut(s) 1956
Psp6I CCWGG 6 cut(s) 45, 269, 1198, 2251, 2327, 2473
PspEI GGTNACC 1 cut(s) 2294
PspGI CCWGG 6 cut(s) 45, 269, 1198, 2251, 2327, 2473
PspN4I GGNNCC 5 cut(s) 268, 375, 697, 1066, 2472
PspPI GGNCC 4 cut(s) 4, 358, 801, 1888
PsuI RGATCY 4 cut(s) 254, 1064, 1660, 1699
PsyI GACNNNGTC 1 cut(s) 2300
PvuII CAGCTG 2 cut(s) 837, 1710
RsaI GTAC 7 cut(s) 213, 301, 735, 2037, 2059, 2357, 2409
RsaNI GTAC 7 cut(s) 212, 300, 734, 2036, 2058, 2356, 2408
SacI GAGCTC 1 cut(s) 1956
Sau96I GGNCC 4 cut(s) 4, 358, 801, 1888
ScaI AGTACT 3 cut(s) 735, 2037, 2357
SchI GAGTC 7 cut(s) 4, 145, 910, 1032, 1082, 1416, 1984
ScrFI CCNGG 8 cut(s) 47, 271, 700, 1200, 1923, 2253, 2329, 2475
SduI GDGCHC 3 cut(s) 376, 1779, 1956
SfaNI GCATC 9 cut(s) 304, 388, 393, 849, 1085, 1355, 1745, 2119, 2292
SfcI CTRYAG 1 cut(s) 1059
SinI GGWCC 3 cut(s) 4, 801, 1888
SmlI CTYRAG 6 cut(s) 181, 1312, 1724, 1747, 2006, 2351
SmoI CTYRAG 6 cut(s) 181, 1312, 1724, 1747, 2006, 2351
SseBI AGGCCT 4 cut(s) 116, 543, 2175, 2343
SsiI CCGC 9 cut(s) 72, 631, 649, 1043, 1196, 1349, 1438, 1479, 1606
SstI GAGCTC 1 cut(s) 1956
StuI AGGCCT 4 cut(s) 116, 543, 2175, 2343
StyD4I CCNGG 8 cut(s) 45, 269, 698, 1198, 1921, 2251, 2327, 2473
StyI CCWWGG 3 cut(s) 111, 354, 1891
TaaI ACNGT 4 cut(s) 160, 908, 1678, 2065
TaiI ACGT 3 cut(s) 522, 1258, 1570
TaqI TCGA 4 cut(s) 63, 495, 1086, 2286
TatI WGTACW 5 cut(s) 211, 733, 2035, 2355, 2407
TauI GCSGC 3 cut(s) 75, 1482, 1608
TfiI GAWTC 6 cut(s) 436, 663, 778, 900, 1962, 2332
TscAI CASTG 5 cut(s) 163, 223, 1280, 1681, 2320
TseFI GTSAC 2 cut(s) 423, 2294
TseI GCWGC 7 cut(s) 19, 167, 834, 837, 869, 1322, 1830
Tsp45I GTSAC 2 cut(s) 423, 2294
TspGWI ACGGA 2 cut(s) 146, 805
TspRI CASTG 5 cut(s) 163, 223, 1280, 1681, 2320
Tth111I GACNNNGTC 1 cut(s) 2300
Vha464I CTTAAG 3 cut(s) 181, 1724, 1747
VpaK11BI GGWCC 3 cut(s) 4, 801, 1888
XapI RAATTY 6 cut(s) 53, 723, 788, 1472, 1627, 1809
XbaI TCTAGA 2 cut(s) 583, 1114
XceI RCATGY 1 cut(s) 2051
XcmI CCANNNNNNNNNTGG 1 cut(s) 1280
XmaJI CCTAGG 1 cut(s) 1891
XmiI GTMKAC 3 cut(s) 1410, 2044, 2376
XmnI GAANNNNTTC 1 cut(s) 1936
ZrmI AGTACT 3 cut(s) 735, 2037, 2357
Zsp2I ATGCAT 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.