Rmu_co8519155.1_g000001

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8519155.1
Physical Location & Seq
Reverse (-)
972 .. 3785
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8519155.1_g000001.1.cds

Sequence Viewer

Length: 2658 bp
atggagacgctgttaggtcctatggttcaagttgtactggacaaggtatgtacggccatgttgaacagagctcaagtcatagcaaactttgaagaccagtttgagcagctgaagaaagggttaacaactacgaatgacctacttgccaaagcgatggatcttcagagcaagtatgacgaggtcatgggtgccttgagccaactaagagaagtaattgataaagctgatgatgtattgacagattgcctggttcgagttacatacaaggaaaataagtcctcactacgtttctggtttcatgatccgggatttaaacttcgagtgggcaagcagttgaaagatatcaatacgaaaatggacatggcacgtaataccttgggagaacatttgaaaattgcaaactctacagcgcctgatagaacccataacggtgaaagccatgaaaaccagagtgaaagtacttgggaattcatgtctcggaattacgacccgggtgtgacctatggattggataattacatcaaaagtttgaaagagtggatgcttggcagtaccaaggggaaactcgactttgctggcattgtggggatggggggtttaggcaaaaccaccattgccaagaagttcttcaatgatccagaagttgtatctcactttgacaagatgatctgggtgcctgtttcacggaactttagtgcgcagcggattctgaagtgcacgctggaaaaggcaaatctgcaagcaccggatgttttggaatctgataacatgttcaccagccttaaacaaggacttaaagatcaagcttatctcatcgtcatggatgatgtgtggcataatcccaatttatatattttctggactaacctccgcgactccctaccaaaaacagttaaaaaaagcagctgcatcataattactactaggaacatagaggttgcagatcgtttggtggaccaagactcactaaaattgcagcccgatactctgaatgaagaggacagctgggctttgttcagcagagttgcatttcaatcaaccgaggttaccgagctgtttaagaaggaggcaggacgggctatcgtgaataaatgtggtgggcttccactggcaatcaagacagtaggagggtatttggccaaggagagtctttttaagtggaccgagaccatagaaaaattccattcattggctatcaatgaagaaacagaatcacttatgctttgtctacaagtgagctacgatgaacttccaaccgaaatgaagcagtgcctattgtgtctctccgtttaccctgaagacgttgagatacatgctgatcagctagttcactggtggtttgtagagggcctcatccggagcaagaaaggcaactctaaaacagcactagaattgggctatgaatatctggcaaaactagccaacagatacctattggaagttgcggaaacccgaggctatgatggaagaatttataagttcaaaatacacgatatgatacgggaattaataatcagaattgcagaaaaagagaaattttgcaacttcaatgaagaatgtaggcagatacagattgaagattctcggtggttatgtctcactgaagatatggcagctgaggttgagacgccgtggatcaaaagcaaatcaagcaattcaaagctgagggcacttttactgatgtcaagcccttcaatgattgacttcaccaagaaatttgtgctgttggagtcactcagggtattggacttttcttactcgaagttagatgtgattattgttgaagatagcagcacagcctcttcagggattagtgtagagaaactcttcgacatgatcacttctctgaaacgcctagcatgtctaaacctcagtggagttcagaaactattagaagtgccatcttcaattgagaaactccttaacctccaggttttggtattgaatggatgcataaatttaggcaagatacacgccaaaatcacaagtttgaagaggcttgttgtcttggacattggaacatgtccccttgagcacttgcctcgggacctagggagactctctgatctgcaagaactctctggattgagggtggtaagtcgggctaagacatggggttgcacccttcttcagcttggaagactaaagcagctaagagttcttcgaattacaataggtaatgtggctgaaatctccgaagaagaaaagaagagcctatcaaatctccagaacctcaaggttctagctattgatgctgcagatactaacaaacaagaaaatctggaaatgatagataagctggagttgcctccaaagatagaggagctgtatctcaggaattaccgctcccgaaaaatgccaaactggtttagccccttgagacttcctaaattgcattatctttctattgaggattgcgacgttgaaagcctaaaggacaactgcagttggaaaattgaaggtttgtatttaaaattgttagaaatgttaaaggtagactggaatgacttgaagagggttatgccagcattacgctacatggagattagcaaatgttccaacttgacaaactttccagtggatgttgtcaagaaagcggtttggagaaagtgtggatcaataacaggcaggaaaaatcaccatggatctaagcattga

Protein Analysis

885

Amino Acids

101.07

Weight (kDa)

7.72

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000540)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50950 AT3G50950
fragaria_vesca FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata RLG00000017001
rosa_multiflora Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1476
Acc16I TGCGCA 1 cut(s) 699
AccB1I GGYRCC 2 cut(s) 188, 673
AccB7I CCANNNNNTGG 2 cut(s) 1189, 1936
AccBSI CCGCTC 1 cut(s) 2346
AccI GTMKAC 2 cut(s) 1228, 2496
AccII CGCG 1 cut(s) 873
AccIII TCCGGA 1 cut(s) 1356
AciI CCGC 5 cut(s) 703, 871, 1445, 2344, 2597
AclWI GGATC 6 cut(s) 165, 296, 629, 1643, 2623, 2653
AcoI YGGCCR 2 cut(s) 54, 1137
AcsI RAATTY 6 cut(s) 467, 1178, 1470, 1535, 1715, 1957
AcuI CTGAAG 7 cut(s) 131, 146, 731, 1317, 1623, 1788, 2114
AcyI GRCGYC 1 cut(s) 1628
AfaI GTAC 4 cut(s) 36, 52, 460, 553
AfiI CCNNNNNNNGG 3 cut(s) 1189, 1806, 1936
AflIII ACRYGT 2 cut(s) 768, 2021
AjnI CCWGG 2 cut(s) 246, 1929
AjuI GAANNNNNNNTTGG 2 cut(s) 611, 643
Alw21I GWGCWC 3 cut(s) 73, 719, 2037
Alw26I GTCTC 7 cut(s) 480, 1160, 1286, 1601, 1619, 2050, 2374
Alw44I GTGCAC 1 cut(s) 715
AlwI GGATC 6 cut(s) 165, 296, 629, 1643, 2623, 2653
AlwNI CAGNNNCTG 1 cut(s) 413
Ama87I CYCGRG 3 cut(s) 490, 1452, 2043
Aor13HI TCCGGA 1 cut(s) 1356
AoxI GGCC 3 cut(s) 54, 1137, 1348
ApaLI GTGCAC 1 cut(s) 715
ApeKI GCWGC 9 cut(s) 106, 700, 903, 906, 976, 1613, 1791, 2149, 2255
ApoI RAATTY 6 cut(s) 467, 1178, 1470, 1535, 1715, 1957
AseI ATTAAT 1 cut(s) 1508
Asp700I GAANNNNTTC 2 cut(s) 626, 1826
AspA2I CCTAGG 1 cut(s) 2050
AspLEI GCGC 2 cut(s) 412, 700
AspS9I GGNCC 5 cut(s) 17, 955, 1161, 1348, 2047
AsuC2I CCSGG 3 cut(s) 306, 491, 492
AsuHPI GGTGA 4 cut(s) 443, 766, 1699, 2630
AsuII TTCGAA 1 cut(s) 2164
AvaI CYCGRG 3 cut(s) 490, 1452, 2043
AvaII GGWCC 4 cut(s) 17, 955, 1161, 2047
AvrII CCTAGG 1 cut(s) 2050
BaeGI GKGCMC 2 cut(s) 719, 1672
BalI TGGCCA 1 cut(s) 1139
BanI GGYRCC 2 cut(s) 188, 673
BanII GRGCYC 1 cut(s) 73
BbsI GAAGAC 3 cut(s) 99, 1305, 2146
Bbv12I GWGCWC 3 cut(s) 73, 719, 2037
BbvCI CCTCAGC 2 cut(s) 1617, 1664
BbvI GCAGC 9 cut(s) 118, 712, 893, 915, 988, 1625, 1803, 2161, 2242
BccI CCATC 4 cut(s) 148, 583, 1457, 1909
BceAI ACGGC 2 cut(s) 69, 1615
BcgI CGANNNNNNTGC 2 cut(s) 2024, 2058
BciT130I CCWGG 2 cut(s) 248, 1931
BclI TGATCA 2 cut(s) 1318, 1836
BcnI CCSGG 3 cut(s) 306, 491, 492
BcoDI GTCTC 7 cut(s) 480, 1160, 1286, 1601, 1619, 2050, 2374
BfaI CTAG 7 cut(s) 924, 1325, 1388, 1418, 1856, 2051, 2243
BfmI CTRYAG 3 cut(s) 405, 2256, 2443
BfoI RGCGCY 1 cut(s) 413
BisI GCNGC 9 cut(s) 107, 701, 904, 907, 977, 1614, 1792, 2150, 2256
BlnI CCTAGG 1 cut(s) 2050
BlsI GCNGC 9 cut(s) 108, 702, 905, 908, 978, 1615, 1793, 2151, 2257
BmcAI AGTACT 1 cut(s) 460
Bme1390I CCNGG 5 cut(s) 248, 306, 491, 492, 1931
Bme18I GGWCC 4 cut(s) 17, 955, 1161, 2047
BmeT110I CYCGRG 3 cut(s) 490, 1452, 2043
BmgT120I GGNCC 5 cut(s) 17, 955, 1161, 1348, 2047
BmiI GGNNCC 3 cut(s) 190, 675, 2048
BmrFI CCNGG 5 cut(s) 248, 306, 491, 492, 1931
BmsI GCATC 4 cut(s) 531, 918, 1940, 2242
BpiI GAAGAC 3 cut(s) 99, 1305, 2146
BpmI CTGGAG 3 cut(s) 1913, 2210, 2321
Bpu10I CCTNAGC 2 cut(s) 1617, 1664
Bpu14I TTCGAA 1 cut(s) 2164
BpuEI CTTGAG 5 cut(s) 57, 214, 2051, 2219, 2398
BpuMI CCSGG 3 cut(s) 306, 491, 492
BsaAI YACGTR 1 cut(s) 368
BsaHI GRCGYC 1 cut(s) 1628
BsaI GGTCTC 1 cut(s) 1160
BsaWI WCCGGW 2 cut(s) 745, 1356
BsaXI ACNNNNNCTCC 3 cut(s) 26, 2596, 2626
Bsc4I CCNNNNNNNGG 3 cut(s) 1189, 1806, 1936
Bse1I ACTGG 7 cut(s) 42, 97, 1113, 1337, 2369, 2504, 2576
Bse3DI GCAATG 1 cut(s) 612
BseAI TCCGGA 1 cut(s) 1356
BseBI CCWGG 2 cut(s) 248, 1931
BseGI GGATG 7 cut(s) 546, 594, 754, 829, 1353, 1955, 2587
BseLI CCNNNNNNNGG 3 cut(s) 1189, 1806, 1936
BseMI GCAATG 1 cut(s) 612
BseMII CTCAG 5 cut(s) 1608, 1655, 1750, 1885, 2347
BseNI ACTGG 7 cut(s) 42, 97, 1113, 1337, 2369, 2504, 2576
BseRI GAGGAG 1 cut(s) 2336
BseSI GKGCMC 2 cut(s) 719, 1672
BseXI GCAGC 9 cut(s) 118, 712, 893, 915, 988, 1625, 1803, 2161, 2242
BseYI CCCAGC 1 cut(s) 1005
Bsh1236I CGCG 1 cut(s) 873
BshFI GGCC 3 cut(s) 56, 1139, 1350
BshNI GGYRCC 2 cut(s) 188, 673
BsiHKAI GWGCWC 3 cut(s) 73, 719, 2037
BsiHKCI CYCGRG 3 cut(s) 490, 1452, 2043
BsiSI CCGG 4 cut(s) 305, 491, 746, 1357
BslFI GGGAC 2 cut(s) 2010, 2060
BslI CCNNNNNNNGG 3 cut(s) 1189, 1806, 1936
BsmAI GTCTC 7 cut(s) 480, 1160, 1286, 1601, 1619, 2050, 2374
BsmBI CGTCTC 1 cut(s) 1619
BsmFI GGGAC 2 cut(s) 2010, 2060
BsnI GGCC 3 cut(s) 56, 1139, 1350
Bso31I GGTCTC 1 cut(s) 1160
BsoBI CYCGRG 3 cut(s) 490, 1452, 2043
Bsp119I TTCGAA 1 cut(s) 2164
Bsp1286I GDGCHC 4 cut(s) 73, 719, 1672, 2037
Bsp13I TCCGGA 1 cut(s) 1356
Bsp19I CCATGG 1 cut(s) 2641
BspACI CCGC 5 cut(s) 703, 871, 1445, 2344, 2597
BspANI GGCC 3 cut(s) 56, 1139, 1350
BspCNI CTCAG 5 cut(s) 1609, 1656, 1749, 1884, 2346
BspEI TCCGGA 1 cut(s) 1356
BspFNI CGCG 1 cut(s) 873
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 3 cut(s) 190, 675, 2048
BspMAI CTGCAG 2 cut(s) 2260, 2447
BspPI GGATC 6 cut(s) 165, 296, 629, 1643, 2623, 2653
BspQI GCTCTTC 1 cut(s) 2204
BspT104I TTCGAA 1 cut(s) 2164
BspT107I GGYRCC 2 cut(s) 188, 673
BspTNI GGTCTC 1 cut(s) 1160
BsrBI CCGCTC 1 cut(s) 2346
BsrDI GCAATG 1 cut(s) 612
BsrI ACTGG 7 cut(s) 42, 97, 1113, 1337, 2369, 2504, 2576
BssNI GRCGYC 1 cut(s) 1628
BssT1I CCWWGG 5 cut(s) 375, 555, 1140, 2050, 2641
Bst2UI CCWGG 2 cut(s) 248, 1931
Bst4CI ACNGT 3 cut(s) 431, 892, 1123
Bst6I CTCTTC 6 cut(s) 990, 1807, 1832, 1988, 2204, 2507
BstACI GRCGYC 1 cut(s) 1628
BstBAI YACGTR 1 cut(s) 368
BstBI TTCGAA 1 cut(s) 2164
BstC8I GCNNGC 5 cut(s) 329, 577, 719, 741, 2526
BstDEI CTNAG 9 cut(s) 203, 1617, 1664, 1736, 1871, 2106, 2153, 2333, 2649
BstDSI CCRYGG 2 cut(s) 1631, 2641
BstEII GGTNACC 1 cut(s) 1045
BstF5I GGATG 7 cut(s) 546, 594, 754, 829, 1353, 1955, 2587
BstFNI CGCG 1 cut(s) 873
BstH2I RGCGCY 1 cut(s) 413
BstHHI GCGC 2 cut(s) 412, 700
BstMAI GTCTC 7 cut(s) 480, 1160, 1286, 1601, 1619, 2050, 2374
BstMWI GCNNNNNNNGC 6 cut(s) 1076, 1368, 1418, 1650, 2252, 2305
BstNI CCWGG 2 cut(s) 248, 1931
BstNSI RCATGY 4 cut(s) 772, 1316, 1863, 2025
BstPI GGTNACC 1 cut(s) 1045
BstSCI CCNGG 5 cut(s) 246, 304, 489, 490, 1929
BstSFI CTRYAG 3 cut(s) 405, 2256, 2443
BstSLI GKGCMC 2 cut(s) 719, 1672
BstUI CGCG 1 cut(s) 873
BstV1I GCAGC 9 cut(s) 118, 712, 893, 915, 988, 1625, 1803, 2161, 2242
BstV2I GAAGAC 3 cut(s) 99, 1305, 2146
BstX2I RGATCY 2 cut(s) 157, 2645
BstXI CCANNNNNNTGG 1 cut(s) 154
BstYI RGATCY 2 cut(s) 157, 2645
BsuRI GGCC 3 cut(s) 56, 1139, 1350
BtgI CCRYGG 2 cut(s) 1631, 2641
BtgZI GCGATG 1 cut(s) 167
BtsCI GGATG 7 cut(s) 546, 594, 754, 829, 1353, 1955, 2587
BtsI GCAGTG 1 cut(s) 1274
BtsIMutI CAGTG 6 cut(s) 1106, 1274, 1330, 1599, 1879, 2583
Cac8I GCNNGC 5 cut(s) 329, 577, 719, 741, 2526
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 1 cut(s) 298
CfoI GCGC 2 cut(s) 412, 700
Cfr13I GGNCC 5 cut(s) 17, 955, 1161, 1348, 2047
Cfr9I CCCGGG 1 cut(s) 490
CseI GACGC 2 cut(s) 16, 1636
Csp6I GTAC 4 cut(s) 35, 51, 459, 552
CviQI GTAC 4 cut(s) 35, 51, 459, 552
DdeI CTNAG 9 cut(s) 203, 1617, 1664, 1736, 1871, 2106, 2153, 2333, 2649
DraI TTTAAA 2 cut(s) 313, 2472
EaeI YGGCCR 2 cut(s) 54, 1137
Eam1104I CTCTTC 6 cut(s) 990, 1807, 1832, 1988, 2204, 2507
EarI CTCTTC 6 cut(s) 990, 1807, 1832, 1988, 2204, 2507
Ecl136II GAGCTC 1 cut(s) 71
Eco130I CCWWGG 5 cut(s) 375, 555, 1140, 2050, 2641
Eco24I GRGCYC 1 cut(s) 73
Eco31I GGTCTC 1 cut(s) 1160
Eco32I GATATC 1 cut(s) 343
Eco47I GGWCC 4 cut(s) 17, 955, 1161, 2047
Eco53kI GAGCTC 1 cut(s) 71
Eco57I CTGAAG 7 cut(s) 131, 146, 731, 1317, 1623, 1788, 2114
Eco88I CYCGRG 3 cut(s) 490, 1452, 2043
Eco91I GGTNACC 1 cut(s) 1045
EcoICRI GAGCTC 1 cut(s) 71
EcoO109I RGGNCCY 3 cut(s) 17, 1348, 2047
EcoO65I GGTNACC 1 cut(s) 1045
EcoRI GAATTC 1 cut(s) 467
EcoRII CCWGG 2 cut(s) 246, 1929
EcoRV GATATC 1 cut(s) 343
EcoT14I CCWWGG 5 cut(s) 375, 555, 1140, 2050, 2641
EcoT22I ATGCAT 1 cut(s) 1955
EcoT38I GRGCYC 1 cut(s) 73
ErhI CCWWGG 5 cut(s) 375, 555, 1140, 2050, 2641
Esp3I CGTCTC 1 cut(s) 1619
FalI AAGNNNNNCTT 2 cut(s) 611, 643
FaqI GGGAC 2 cut(s) 2010, 2060
FbaI TGATCA 2 cut(s) 1318, 1836
FblI GTMKAC 2 cut(s) 1228, 2496
Fnu4HI GCNGC 9 cut(s) 107, 701, 904, 907, 977, 1614, 1792, 2150, 2256
FokI GGATG 7 cut(s) 553, 601, 761, 836, 1340, 1962, 2594
FriOI GRGCYC 1 cut(s) 73
Fsp4HI GCNGC 9 cut(s) 107, 701, 904, 907, 977, 1614, 1792, 2150, 2256
FspBI CTAG 7 cut(s) 924, 1325, 1388, 1418, 1856, 2051, 2243
FspI TGCGCA 1 cut(s) 699
GlaI GCGC 2 cut(s) 411, 699
GluI GCNGC 9 cut(s) 107, 701, 904, 907, 977, 1614, 1792, 2150, 2256
GsaI CCCAGC 1 cut(s) 1009
GsuI CTGGAG 3 cut(s) 1913, 2210, 2321
HaeII RGCGCY 1 cut(s) 413
HaeIII GGCC 3 cut(s) 56, 1139, 1350
HapII CCGG 4 cut(s) 305, 491, 746, 1357
HgaI GACGC 2 cut(s) 16, 1636
HhaI GCGC 2 cut(s) 412, 700
Hin1I GRCGYC 1 cut(s) 1628
Hin6I GCGC 2 cut(s) 410, 698
HinP1I GCGC 2 cut(s) 410, 698
HincII GTYRAC 1 cut(s) 123
HindII GTYRAC 1 cut(s) 123
HindIII AAGCTT 1 cut(s) 804
HinfI GANTC 9 cut(s) 706, 758, 875, 962, 1147, 1211, 1580, 1730, 2058
HpaI GTTAAC 1 cut(s) 123
HpaII CCGG 4 cut(s) 305, 491, 746, 1357
HphI GGTGA 4 cut(s) 443, 766, 1699, 2630
Hpy166II GTNNAC 9 cut(s) 123, 717, 774, 955, 1161, 1229, 1291, 1330, 2497
Hpy8I GTNNAC 9 cut(s) 123, 717, 774, 955, 1161, 1229, 1291, 1330, 2497
Hpy99I CGWCG 1 cut(s) 2423
HpyAV CCTTC 4 cut(s) 1057, 1701, 2135, 2453
HpyCH4III ACNGT 3 cut(s) 431, 892, 1123
HpyCH4IV ACGT 4 cut(s) 286, 367, 1302, 2421
HpyF10VI GCNNNNNNNGC 6 cut(s) 1076, 1368, 1418, 1650, 2252, 2305
HpyF3I CTNAG 9 cut(s) 203, 1617, 1664, 1736, 1871, 2106, 2153, 2333, 2649
HpySE526I ACGT 4 cut(s) 286, 367, 1302, 2421
Hsp92I GRCGYC 1 cut(s) 1628
HspAI GCGC 2 cut(s) 410, 698
Kpn2I TCCGGA 1 cut(s) 1356
Ksp22I TGATCA 2 cut(s) 1318, 1836
KspAI GTTAAC 1 cut(s) 123
LguI GCTCTTC 1 cut(s) 2204
LmnI GCTCC 3 cut(s) 1359, 2323, 2351
Lsp1109I GCAGC 9 cut(s) 118, 712, 893, 915, 988, 1625, 1803, 2161, 2242
LweI GCATC 4 cut(s) 531, 918, 1940, 2242
MaeI CTAG 7 cut(s) 924, 1325, 1388, 1418, 1856, 2051, 2243
MaeII ACGT 4 cut(s) 286, 367, 1302, 2421
MaeIII GTNAC 4 cut(s) 256, 496, 1045, 1731
MbiI CCGCTC 1 cut(s) 2346
MfeI CAATTG 1 cut(s) 1908
MflI RGATCY 2 cut(s) 157, 2645
MhlI GDGCHC 4 cut(s) 73, 719, 1672, 2037
MlsI TGGCCA 1 cut(s) 1139
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 5 cut(s) 869, 956, 1156, 1739, 2052
MmeI TCCRAC 4 cut(s) 1277, 1707, 2429, 2583
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 1 cut(s) 1955
MroI TCCGGA 1 cut(s) 1356
MroXI GAANNNNTTC 2 cut(s) 626, 1826
MscI TGGCCA 1 cut(s) 1139
MslI CAYNNNNRTG 2 cut(s) 429, 818
Msp20I TGGCCA 1 cut(s) 1139
MspA1I CMGCKG 5 cut(s) 109, 703, 906, 1005, 1616
MspI CCGG 4 cut(s) 305, 491, 746, 1357
MspR9I CCNGG 5 cut(s) 248, 306, 491, 492, 1931
MunI CAATTG 1 cut(s) 1908
MvaI CCWGG 2 cut(s) 248, 1931
MvnI CGCG 1 cut(s) 873
MwoI GCNNNNNNNGC 6 cut(s) 1076, 1368, 1418, 1650, 2252, 2305
NciI CCSGG 3 cut(s) 306, 491, 492
NcoI CCATGG 1 cut(s) 2641
NlaIV GGNNCC 3 cut(s) 190, 675, 2048
NmuCI GTSAC 2 cut(s) 496, 1731
NsbI TGCGCA 1 cut(s) 699
NsiI ATGCAT 1 cut(s) 1955
NspI RCATGY 4 cut(s) 772, 1316, 1863, 2025
NspV TTCGAA 1 cut(s) 2164
PagI TCATGA 1 cut(s) 298
PciI ACATGT 2 cut(s) 768, 2021
PciSI GCTCTTC 1 cut(s) 2204
PdmI GAANNNNTTC 2 cut(s) 626, 1826
PfeI GAWTC 4 cut(s) 706, 758, 1211, 1580
PflFI GACNNNGTC 1 cut(s) 179
PflMI CCANNNNNTGG 2 cut(s) 1189, 1936
PfoI TCCNGGA 1 cut(s) 304
PkrI GCNGC 9 cut(s) 108, 702, 905, 908, 978, 1615, 1793, 2151, 2257
PleI GAGTC 5 cut(s) 869, 956, 1155, 1738, 2052
PpsI GAGTC 5 cut(s) 869, 956, 1155, 1738, 2052
Ppu21I YACGTR 1 cut(s) 368
PpuMI RGGWCCY 2 cut(s) 17, 2047
PscI ACATGT 2 cut(s) 768, 2021
PshBI ATTAAT 1 cut(s) 1508
PsiI TTATAA 1 cut(s) 1476
Psp124BI GAGCTC 1 cut(s) 73
Psp5II RGGWCCY 2 cut(s) 17, 2047
Psp6I CCWGG 2 cut(s) 246, 1929
PspEI GGTNACC 1 cut(s) 1045
PspFI CCCAGC 1 cut(s) 1005
PspGI CCWGG 2 cut(s) 246, 1929
PspN4I GGNNCC 3 cut(s) 190, 675, 2048
PspPI GGNCC 5 cut(s) 17, 955, 1161, 1348, 2047
PspPPI RGGWCCY 2 cut(s) 17, 2047
PstI CTGCAG 2 cut(s) 2260, 2447
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 2 cut(s) 157, 2645
PsyI GACNNNGTC 1 cut(s) 179
PvuII CAGCTG 4 cut(s) 109, 906, 1005, 1616
RsaI GTAC 4 cut(s) 36, 52, 460, 553
RsaNI GTAC 4 cut(s) 35, 51, 459, 552
RseI CAYNNNNRTG 2 cut(s) 429, 818
SacI GAGCTC 1 cut(s) 73
SapI GCTCTTC 1 cut(s) 2204
SatI GCNGC 9 cut(s) 107, 701, 904, 907, 977, 1614, 1792, 2150, 2256
Sau96I GGNCC 5 cut(s) 17, 955, 1161, 1348, 2047
ScaI AGTACT 1 cut(s) 460
SchI GAGTC 5 cut(s) 869, 956, 1156, 1739, 2052
ScrFI CCNGG 5 cut(s) 248, 306, 491, 492, 1931
SduI GDGCHC 4 cut(s) 73, 719, 1672, 2037
SfaNI GCATC 4 cut(s) 531, 918, 1940, 2242
SfcI CTRYAG 3 cut(s) 405, 2256, 2443
SfuI TTCGAA 1 cut(s) 2164
SinI GGWCC 4 cut(s) 17, 955, 1161, 2047
SmaI CCCGGG 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 429, 818
SmlI CTYRAG 5 cut(s) 72, 193, 2030, 2234, 2377
SmoI CTYRAG 5 cut(s) 72, 193, 2030, 2234, 2377
SsiI CCGC 5 cut(s) 703, 871, 1445, 2344, 2597
SspMI CTAG 7 cut(s) 924, 1325, 1388, 1418, 1856, 2051, 2243
SstI GAGCTC 1 cut(s) 73
StyD4I CCNGG 5 cut(s) 246, 304, 489, 490, 1929
StyI CCWWGG 5 cut(s) 375, 555, 1140, 2050, 2641
TaaI ACNGT 3 cut(s) 431, 892, 1123
TaiI ACGT 4 cut(s) 289, 370, 1305, 2424
TaqI TCGA 6 cut(s) 253, 319, 567, 1760, 1830, 2164
TaqII GACCGA 1 cut(s) 1178
TatI WGTACW 2 cut(s) 34, 458
TfiI GAWTC 4 cut(s) 706, 758, 1211, 1580
TscAI CASTG 6 cut(s) 1113, 1274, 1337, 1606, 1879, 2583
TseFI GTSAC 2 cut(s) 496, 1731
TseI GCWGC 9 cut(s) 106, 700, 903, 906, 976, 1613, 1791, 2149, 2255
Tsp45I GTSAC 2 cut(s) 496, 1731
TspGWI ACGGA 2 cut(s) 700, 1276
TspMI CCCGGG 1 cut(s) 490
TspRI CASTG 6 cut(s) 1113, 1274, 1337, 1606, 1879, 2583
Tth111I GACNNNGTC 1 cut(s) 179
Van91I CCANNNNNTGG 2 cut(s) 1189, 1936
VneI GTGCAC 1 cut(s) 715
VpaK11BI GGWCC 4 cut(s) 17, 955, 1161, 2047
VspI ATTAAT 1 cut(s) 1508
XapI RAATTY 6 cut(s) 467, 1178, 1470, 1535, 1715, 1957
XceI RCATGY 4 cut(s) 772, 1316, 1863, 2025
XmaI CCCGGG 1 cut(s) 490
XmaJI CCTAGG 1 cut(s) 2050
XmiI GTMKAC 2 cut(s) 1228, 2496
XmnI GAANNNNTTC 2 cut(s) 626, 1826
XspI CTAG 7 cut(s) 924, 1325, 1388, 1418, 1856, 2051, 2243
ZrmI AGTACT 1 cut(s) 460
Zsp2I ATGCAT 1 cut(s) 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.