Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001706.1

Orthogroup ID

OG0000540

Physical Location & Seq

Genomic Coordinates Reverse (-)

91471 .. 93742

Gene Structure 2272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001706.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

atgtcgttaatagtggaggctatggtccagactctaacgcagcaagtgttcacagctctaatgaaccaggctgaatttgcactcgacttcagcggccagtttgagcagttgaagacagggcttgatctcaccaaggccttacttgcagacacggagagtctcaaccacaagaacaacactgtcaaggcagcattgtttgacttaagggaagtcatctacaaagcagacgatgtactcactgattgcttggttagagatgaatacagaaaggatggatcttgttccggttcctggcttcacgatccattcttcctgcatcgtacgggaaagaaattgagagacatcaatttgcgtatgaaggagatagagaagaccttgggccggtttttgagggcaccagacagcatccatagagaagatgcataccaaattagagtgatggtgtcacaagactggaatccaactgagataattgggttggatagcgatgtggagaagattaagggttggattttcgacaccagcaagttacttcaccacgtaggcattgtgggaatgggaggcctcgggaaaaccaccattgctcaaaagatatttcatgatctagaagtagtaggccactttcacaagctgatatggtttgcatttcctacaagcaagggattatgcccggaggacaggcttgagaaattaggaaaagaactcttgaagaagtgtggtggactcccactcgcaatcaagaccataggatccttgttggcatcaaagatcgactccccttctcaatggagacgagttctggagagctttcatgctttgacaaccgagggaaaaactagctcagttatggcctctttgcgattgagctatgatgaactcccgcctggtctgaagcaatgcctgctgtgtttctccatctatcctgaagactatgagatacatgctgatcagttaatccactggtggattggagaaggcgtcgtgcaaagcaagggctcaagaacagcaatagaagtgggatatgagtatctcgcagaactaatcagcagatgcttggttgaaattgtgcagaggagaggatttgatgggagagtctacaaatgcaagatacacgatatggtgcgggaactgataataatgattgcagaggaagaggaattttgcggctttgacgaacgaggcagacaagaattgacagcaaagactaggtggttatgctttattgatgaaatggaggagaagtccttgaaacatagttcaaagctcagggcattattgctgatgtcaagccgcagatttgactttgaaaggaattcggggtttctgcgatccctcagaatgttggatctatcaaactgcactgtggatgagcattgtgtggaggatctcttcagctggatcagctcccttaagcgcttggcatctctgaacttaagtggtattcaagcgctgaaagaagtgccctcttcaattcataaactcctcaacctccaaattttacttttaacaggttgcagcaatctagtaaaaatacacccttccatcactaatttgaagaagctgattattttggacctaggcgggtgtccaatccaatacttgcctcagggattgggaaggctttattatcttcaagagctctccggattcaaggttgtgagtcagcctagaaagccaagtttccggcttcttgagattagggaattgatcaacctgagagtactgcgtatacatgtaagcagtaccacagttatcgcagacaatgaacttgatgtcctctctcagcttagaaggctcaatgttctagctattgatgcagaagattgtagaaataacaatgttttggaaatgctagaaggcctgacccctcctccaagcctccaagagctgtatctcaggaattacaagaaggaaactctacccaactgggttaatcccggacagctttcgcgattgcagtatctttgcatcgagaatggagaccttgtcgagctaagcagtggtcaaaccacctggaatcttgaaggcctatgtctcaagtacttgatgaggctagaggtagactggaaggacttggagaaggatatgcctgtacttcactacatggagatcagtcattgttacaacttgacggatttcccatgttcggttatggaacctggggtctggagaaagcattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0023052 GO:0042742 GO:0043207 GO:0043621 GO:0044464 GO:0050789 GO:0050794 GO:0050829 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

726

Amino Acids

83.12

Weight (kDa)

6.34

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000540)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50950 AT3G50950
fragaria_vesca	FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica	MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica	Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis	pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis	RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata	RLG00000017001
rosa_multiflora	Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii	Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa	Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha	Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana	Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	394
AccI	GTMKAC	3 cut(s)	1095, 1729, 2061
AccII	CGCG	1 cut(s)	1951
AccIII	TCCGGA	1 cut(s)	1643
AciI	CCGC	6 cut(s)	93, 881, 1123, 1164, 1291, 1581
AclWI	GGATC	8 cut(s)	283, 296, 744, 757, 1323, 1353, 1392, 1406
AcoI	YGGCCR	1 cut(s)	94
AcsI	RAATTY	4 cut(s)	74, 1157, 1312, 1494
AcuI	CTGAAG	4 cut(s)	73, 911, 945, 1375
AcyI	GRCGYC	1 cut(s)	978
AfaI	GTAC	6 cut(s)	234, 322, 1722, 1744, 2042, 2094
AfeI	AGCGCT	2 cut(s)	1415, 1449
AfiI	CCNNNNNNNGG	3 cut(s)	291, 381, 2146
AflII	CTTAAG	3 cut(s)	202, 1409, 1432
AflIII	ACRYGT	1 cut(s)	1732
AjnI	CCWGG	5 cut(s)	66, 290, 883, 2012, 2158
AloI	GAACNNNNNNTCC	2 cut(s)	1758, 1790
Alw21I	GWGCWC	1 cut(s)	1641
Alw26I	GTCTC	5 cut(s)	164, 333, 784, 1974, 2039
AlwI	GGATC	8 cut(s)	283, 296, 744, 757, 1323, 1353, 1392, 1406
Ama87I	CYCGRG	1 cut(s)	566
Aor13HI	TCCGGA	1 cut(s)	1643
Aor51HI	AGCGCT	2 cut(s)	1415, 1449
AoxI	GGCC	8 cut(s)	94, 135, 379, 562, 616, 849, 1858, 2026
ApeKI	GCWGC	3 cut(s)	40, 188, 1515
ApoI	RAATTY	4 cut(s)	74, 1157, 1312, 1494
AspA2I	CCTAGG	1 cut(s)	1576
AspLEI	GCGC	2 cut(s)	1416, 1450
AspS9I	GGNCC	3 cut(s)	25, 379, 1573
AsuC2I	CCSGG	2 cut(s)	671, 1938
AsuHPI	GGTGA	2 cut(s)	121, 527
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	2 cut(s)	25, 1573
AvrII	CCTAGG	1 cut(s)	1576
AxyI	CCTNAGG	1 cut(s)	1605
BaeGI	GKGCMC	2 cut(s)	397, 1464
BamHI	GGATCC	1 cut(s)	749
BanI	GGYRCC	1 cut(s)	394
BanII	GRGCYC	2 cut(s)	998, 1641
BbsI	GAAGAC	3 cut(s)	119, 377, 933
Bbv12I	GWGCWC	1 cut(s)	1641
BbvI	GCAGC	3 cut(s)	52, 200, 1527
BccI	CCATC	5 cut(s)	266, 433, 923, 1079, 1550
BciT130I	CCWGG	5 cut(s)	68, 292, 885, 2014, 2160
BclI	TGATCA	2 cut(s)	946, 1707
BcnI	CCSGG	2 cut(s)	671, 1938
BcoDI	GTCTC	5 cut(s)	164, 333, 784, 1974, 2039
BfaI	CTAG	9 cut(s)	605, 837, 1206, 1523, 1577, 1668, 1805, 1853, 2054
BfoI	RGCGCY	2 cut(s)	1417, 1451
BfrI	CTTAAG	3 cut(s)	202, 1409, 1432
BisI	GCNGC	6 cut(s)	41, 94, 189, 1165, 1291, 1516
BlnI	CCTAGG	1 cut(s)	1576
BlpI	GCTNAGC	1 cut(s)	1994
BlsI	GCNGC	6 cut(s)	42, 95, 190, 1166, 1292, 1517
BmcAI	AGTACT	2 cut(s)	1722, 2042
Bme1390I	CCNGG	7 cut(s)	68, 292, 671, 885, 1938, 2014, 2160
Bme18I	GGWCC	2 cut(s)	25, 1573
BmeT110I	CYCGRG	1 cut(s)	566
BmgT120I	GGNCC	3 cut(s)	25, 379, 1573
BmiI	GGNNCC	4 cut(s)	289, 396, 751, 2157
BmrFI	CCNGG	7 cut(s)	68, 292, 671, 885, 1938, 2014, 2160
BmrI	ACTGGG	1 cut(s)	1936
BmsI	GCATC	8 cut(s)	325, 409, 414, 770, 1040, 1430, 1804, 1977
BmuI	ACTGGG	1 cut(s)	1936
BpiI	GAAGAC	3 cut(s)	119, 377, 933
BpmI	CTGGAG	1 cut(s)	821
Bpu10I	CCTNAGC	1 cut(s)	1265
Bpu1102I	GCTNAGC	1 cut(s)	1994
BpuEI	CTTGAG	4 cut(s)	704, 982, 1712, 2021
BpuMI	CCSGG	2 cut(s)	671, 1938
BsaAI	YACGTR	1 cut(s)	541
BsaHI	GRCGYC	1 cut(s)	978
BsaI	GGTCTC	1 cut(s)	1974
BsaJI	CCNNGG	6 cut(s)	132, 375, 565, 825, 1576, 2159
BsaWI	WCCGGW	2 cut(s)	284, 1643
BsaXI	ACNNNNNCTCC	8 cut(s)	963, 993, 1226, 1256, 1855, 1885, 1971, 2001
Bsc4I	CCNNNNNNNGG	3 cut(s)	291, 381, 2146
Bse118I	RCCGGY	1 cut(s)	381
Bse1I	ACTGG	5 cut(s)	97, 458, 965, 1931, 2069
Bse21I	CCTNAGG	1 cut(s)	1605
Bse3DI	GCAATG	2 cut(s)	579, 902
BseAI	TCCGGA	1 cut(s)	1643
BseBI	CCWGG	5 cut(s)	68, 292, 885, 2014, 2160
BseDI	CCNNGG	6 cut(s)	132, 375, 565, 825, 1576, 2159
BseGI	GGATG	3 cut(s)	277, 405, 1372
BseLI	CCNNNNNNNGG	3 cut(s)	291, 381, 2146
BseMI	GCAATG	2 cut(s)	579, 902
BseMII	CTCAG	8 cut(s)	456, 855, 1279, 1348, 1619, 1706, 1796, 1909
BseNI	ACTGG	5 cut(s)	97, 458, 965, 1931, 2069
BseRI	GAGGAG	4 cut(s)	1087, 1250, 1472, 1860
BseSI	GKGCMC	2 cut(s)	397, 1464
BseXI	GCAGC	3 cut(s)	52, 200, 1527
BsgI	GTGCAG	2 cut(s)	1088, 1342
Bsh1236I	CGCG	1 cut(s)	1951
BshFI	GGCC	8 cut(s)	96, 137, 381, 564, 618, 851, 1860, 2028
BshNI	GGYRCC	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	1641
BsiHKCI	CYCGRG	1 cut(s)	566
BsiSI	CCGG	6 cut(s)	285, 382, 671, 1644, 1684, 1938
BsiWI	CGTACG	1 cut(s)	320
BslI	CCNNNNNNNGG	3 cut(s)	291, 381, 2146
BsmAI	GTCTC	5 cut(s)	164, 333, 784, 1974, 2039
BsmBI	CGTCTC	1 cut(s)	784
BsnI	GGCC	8 cut(s)	96, 137, 381, 564, 618, 851, 1860, 2028
Bso31I	GGTCTC	1 cut(s)	1974
BsoBI	CYCGRG	1 cut(s)	566
Bsp1286I	GDGCHC	4 cut(s)	397, 998, 1464, 1641
Bsp13I	TCCGGA	1 cut(s)	1643
Bsp1720I	GCTNAGC	1 cut(s)	1994
Bsp68I	TCGCGA	1 cut(s)	1951
BspACI	CCGC	6 cut(s)	93, 881, 1123, 1164, 1291, 1581
BspANI	GGCC	8 cut(s)	96, 137, 381, 564, 618, 851, 1860, 2028
BspCNI	CTCAG	8 cut(s)	457, 854, 1278, 1347, 1618, 1707, 1795, 1908
BspEI	TCCGGA	1 cut(s)	1643
BspFNI	CGCG	1 cut(s)	1951
BspHI	TCATGA	1 cut(s)	598
BspLI	GGNNCC	4 cut(s)	289, 396, 751, 2157
BspPI	GGATC	8 cut(s)	283, 296, 744, 757, 1323, 1353, 1392, 1406
BspT107I	GGYRCC	1 cut(s)	394
BspTI	CTTAAG	3 cut(s)	202, 1409, 1432
BspTNI	GGTCTC	1 cut(s)	1974
BsrDI	GCAATG	2 cut(s)	579, 902
BsrFI	RCCGGY	1 cut(s)	381
BsrI	ACTGG	5 cut(s)	97, 458, 965, 1931, 2069
BssAI	RCCGGY	1 cut(s)	381
BssECI	CCNNGG	6 cut(s)	132, 375, 565, 825, 1576, 2159
BssNAI	GTATAC	1 cut(s)	1730
BssNI	GRCGYC	1 cut(s)	978
BssT1I	CCWWGG	3 cut(s)	132, 375, 1576
Bst1107I	GTATAC	1 cut(s)	1730
Bst2UI	CCWGG	5 cut(s)	68, 292, 885, 2014, 2160
Bst4CI	ACNGT	3 cut(s)	181, 1363, 1750
Bst6I	CTCTTC	3 cut(s)	1146, 1394, 1471
BstACI	GRCGYC	1 cut(s)	978
BstAFI	CTTAAG	3 cut(s)	202, 1409, 1432
BstAPI	GCANNNNNTGC	1 cut(s)	901
BstBAI	YACGTR	1 cut(s)	541
BstC8I	GCNNGC	1 cut(s)	902
BstF5I	GGATG	3 cut(s)	277, 405, 1372
BstFNI	CGCG	1 cut(s)	1951
BstH2I	RGCGCY	2 cut(s)	1417, 1451
BstHHI	GCGC	2 cut(s)	1416, 1450
BstMAI	GTCTC	5 cut(s)	164, 333, 784, 1974, 2039
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 143, 901, 1401, 1672, 1792, 1814
BstNI	CCWGG	5 cut(s)	68, 292, 885, 2014, 2160
BstNSI	RCATGY	2 cut(s)	944, 1736
BstSCI	CCNGG	7 cut(s)	66, 290, 669, 883, 1936, 2012, 2158
BstSLI	GKGCMC	2 cut(s)	397, 1464
BstUI	CGCG	1 cut(s)	1951
BstV1I	GCAGC	3 cut(s)	52, 200, 1527
BstV2I	GAAGAC	3 cut(s)	119, 377, 933
BstX2I	RGATCY	4 cut(s)	275, 749, 1345, 1384
BstYI	RGATCY	4 cut(s)	275, 749, 1345, 1384
BstZ17I	GTATAC	1 cut(s)	1730
Bsu36I	CCTNAGG	1 cut(s)	1605
BsuRI	GGCC	8 cut(s)	96, 137, 381, 564, 618, 851, 1860, 2028
BtgZI	GCGATG	1 cut(s)	501
BtsCI	GGATG	3 cut(s)	277, 405, 1372
BtsI	GCAGTG	1 cut(s)	2005
BtsIMutI	CAGTG	5 cut(s)	177, 237, 958, 1359, 2005
BtuMI	TCGCGA	1 cut(s)	1951
Cac8I	GCNNGC	1 cut(s)	902
CciI	TCATGA	1 cut(s)	598
CfoI	GCGC	2 cut(s)	1416, 1450
Cfr10I	RCCGGY	1 cut(s)	381
Cfr13I	GGNCC	3 cut(s)	25, 379, 1573
CseI	GACGC	1 cut(s)	967
Csp6I	GTAC	6 cut(s)	233, 321, 1721, 1743, 2041, 2093
CspCI	CAANNNNNGTGG	2 cut(s)	996, 1031
CviAII	CATG	6 cut(s)	599, 812, 941, 1733, 2104, 2142
CviQI	GTAC	6 cut(s)	233, 321, 1721, 1743, 2041, 2093
EaeI	YGGCCR	1 cut(s)	94
Eam1104I	CTCTTC	3 cut(s)	1146, 1394, 1471
EarI	CTCTTC	3 cut(s)	1146, 1394, 1471
Ecl136II	GAGCTC	1 cut(s)	1639
Eco130I	CCWWGG	3 cut(s)	132, 375, 1576
Eco147I	AGGCCT	4 cut(s)	137, 564, 1860, 2028
Eco24I	GRGCYC	2 cut(s)	998, 1641
Eco31I	GGTCTC	1 cut(s)	1974
Eco47I	GGWCC	2 cut(s)	25, 1573
Eco47III	AGCGCT	2 cut(s)	1415, 1449
Eco53kI	GAGCTC	1 cut(s)	1639
Eco57I	CTGAAG	4 cut(s)	73, 911, 945, 1375
Eco81I	CCTNAGG	1 cut(s)	1605
Eco88I	CYCGRG	1 cut(s)	566
EcoICRI	GAGCTC	1 cut(s)	1639
EcoRI	GAATTC	1 cut(s)	1312
EcoRII	CCWGG	5 cut(s)	66, 290, 883, 2012, 2158
EcoT14I	CCWWGG	3 cut(s)	132, 375, 1576
EcoT22I	ATGCAT	1 cut(s)	424
EcoT38I	GRGCYC	2 cut(s)	998, 1641
ErhI	CCWWGG	3 cut(s)	132, 375, 1576
Esp3I	CGTCTC	1 cut(s)	784
FaeI	CATG	6 cut(s)	602, 815, 944, 1736, 2107, 2145
FatI	CATG	6 cut(s)	598, 811, 940, 1732, 2103, 2141
FauI	CCCGC	3 cut(s)	888, 1116, 1574
FbaI	TGATCA	2 cut(s)	946, 1707
FblI	GTMKAC	3 cut(s)	1095, 1729, 2061
Fnu4HI	GCNGC	6 cut(s)	41, 94, 189, 1165, 1291, 1516
FokI	GGATG	3 cut(s)	284, 392, 1379
FriOI	GRGCYC	2 cut(s)	998, 1641
Fsp4HI	GCNGC	6 cut(s)	41, 94, 189, 1165, 1291, 1516
FspBI	CTAG	9 cut(s)	605, 837, 1206, 1523, 1577, 1668, 1805, 1853, 2054
GlaI	GCGC	2 cut(s)	1415, 1449
GluI	GCNGC	6 cut(s)	41, 94, 189, 1165, 1291, 1516
GsuI	CTGGAG	1 cut(s)	821
HaeII	RGCGCY	2 cut(s)	1417, 1451
HaeIII	GGCC	8 cut(s)	96, 137, 381, 564, 618, 851, 1860, 2028
HapII	CCGG	6 cut(s)	285, 382, 671, 1644, 1684, 1938
HgaI	GACGC	1 cut(s)	967
HhaI	GCGC	2 cut(s)	1416, 1450
Hin1I	GRCGYC	1 cut(s)	978
Hin1II	CATG	6 cut(s)	602, 815, 944, 1736, 2107, 2145
Hin6I	GCGC	2 cut(s)	1414, 1448
HinP1I	GCGC	2 cut(s)	1414, 1448
HinfI	GANTC	9 cut(s)	31, 157, 457, 723, 773, 1092, 1647, 1660, 2017
HpaII	CCGG	6 cut(s)	285, 382, 671, 1644, 1684, 1938
HphI	GGTGA	2 cut(s)	121, 527
Hpy166II	GTNNAC	5 cut(s)	51, 722, 1096, 1730, 2062
Hpy188I	TCNGA	3 cut(s)	891, 1337, 1428
Hpy8I	GTNNAC	5 cut(s)	51, 722, 1096, 1730, 2062
Hpy99I	CGWCG	1 cut(s)	983
HpyCH4III	ACNGT	3 cut(s)	181, 1363, 1750
HpyCH4IV	ACGT	1 cut(s)	540
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 143, 901, 1401, 1672, 1792, 1814
HpySE526I	ACGT	1 cut(s)	540
Hsp92I	GRCGYC	1 cut(s)	978
Hsp92II	CATG	6 cut(s)	602, 815, 944, 1736, 2107, 2145
HspAI	GCGC	2 cut(s)	1414, 1448
Kpn2I	TCCGGA	1 cut(s)	1643
Ksp22I	TGATCA	2 cut(s)	946, 1707
LmnI	GCTCC	1 cut(s)	1409
Lsp1109I	GCAGC	3 cut(s)	52, 200, 1527
LweI	GCATC	8 cut(s)	325, 409, 414, 770, 1040, 1430, 1804, 1977
MaeI	CTAG	9 cut(s)	605, 837, 1206, 1523, 1577, 1668, 1805, 1853, 2054
MaeII	ACGT	1 cut(s)	540
MaeIII	GTNAC	3 cut(s)	444, 528, 2120
MflI	RGATCY	4 cut(s)	275, 749, 1345, 1384
MhlI	GDGCHC	4 cut(s)	397, 998, 1464, 1641
MlyI	GAGTC	6 cut(s)	25, 166, 717, 767, 1101, 1669
MmeI	TCCRAC	4 cut(s)	459, 485, 488, 1323
Mph1103I	ATGCAT	1 cut(s)	424
MroI	TCCGGA	1 cut(s)	1643
MseI	TTAA	9 cut(s)	8, 203, 501, 953, 1410, 1433, 1505, 1932, 2179
MspA1I	CMGCKG	2 cut(s)	93, 1395
MspCI	CTTAAG	3 cut(s)	202, 1409, 1432
MspI	CCGG	6 cut(s)	285, 382, 671, 1644, 1684, 1938
MspR9I	CCNGG	7 cut(s)	68, 292, 671, 885, 1938, 2014, 2160
MvaI	CCWGG	5 cut(s)	68, 292, 885, 2014, 2160
MvnI	CGCG	1 cut(s)	1951
MwoI	GCNNNNNNNGC	7 cut(s)	77, 143, 901, 1401, 1672, 1792, 1814
NciI	CCSGG	2 cut(s)	671, 1938
NlaIII	CATG	6 cut(s)	602, 815, 944, 1736, 2107, 2145
NlaIV	GGNNCC	4 cut(s)	289, 396, 751, 2157
NmuCI	GTSAC	1 cut(s)	444
NruI	TCGCGA	1 cut(s)	1951
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	2 cut(s)	944, 1736
PagI	TCATGA	1 cut(s)	598
PceI	AGGCCT	4 cut(s)	137, 564, 1860, 2028
PciI	ACATGT	1 cut(s)	1732
PfeI	GAWTC	3 cut(s)	457, 1647, 2017
Pfl23II	CGTACG	1 cut(s)	320
PflFI	GACNNNGTC	1 cut(s)	1985
PfoI	TCCNGGA	1 cut(s)	1936
PkrI	GCNGC	6 cut(s)	42, 95, 190, 1166, 1292, 1517
PleI	GAGTC	6 cut(s)	25, 165, 717, 767, 1100, 1668
PpsI	GAGTC	6 cut(s)	25, 165, 717, 767, 1100, 1668
Ppu21I	YACGTR	1 cut(s)	541
PscI	ACATGT	1 cut(s)	1732
Psp124BI	GAGCTC	1 cut(s)	1641
Psp6I	CCWGG	5 cut(s)	66, 290, 883, 2012, 2158
PspGI	CCWGG	5 cut(s)	66, 290, 883, 2012, 2158
PspLI	CGTACG	1 cut(s)	320
PspN4I	GGNNCC	4 cut(s)	289, 396, 751, 2157
PspPI	GGNCC	3 cut(s)	25, 379, 1573
PsuI	RGATCY	4 cut(s)	275, 749, 1345, 1384
PsyI	GACNNNGTC	1 cut(s)	1985
PvuII	CAGCTG	1 cut(s)	1395
RruI	TCGCGA	1 cut(s)	1951
RsaI	GTAC	6 cut(s)	234, 322, 1722, 1744, 2042, 2094
RsaNI	GTAC	6 cut(s)	233, 321, 1721, 1743, 2041, 2093
SacI	GAGCTC	1 cut(s)	1641
SaqAI	TTAA	9 cut(s)	8, 203, 501, 953, 1410, 1433, 1505, 1932, 2179
SatI	GCNGC	6 cut(s)	41, 94, 189, 1165, 1291, 1516
Sau96I	GGNCC	3 cut(s)	25, 379, 1573
ScaI	AGTACT	2 cut(s)	1722, 2042
SchI	GAGTC	6 cut(s)	25, 166, 717, 767, 1101, 1669
ScrFI	CCNGG	7 cut(s)	68, 292, 671, 885, 1938, 2014, 2160
SduI	GDGCHC	4 cut(s)	397, 998, 1464, 1641
SfaNI	GCATC	8 cut(s)	325, 409, 414, 770, 1040, 1430, 1804, 1977
SinI	GGWCC	2 cut(s)	25, 1573
SmlI	CTYRAG	7 cut(s)	202, 683, 997, 1409, 1432, 1691, 2036
SmoI	CTYRAG	7 cut(s)	202, 683, 997, 1409, 1432, 1691, 2036
SseBI	AGGCCT	4 cut(s)	137, 564, 1860, 2028
SsiI	CCGC	6 cut(s)	93, 881, 1123, 1164, 1291, 1581
SspMI	CTAG	9 cut(s)	605, 837, 1206, 1523, 1577, 1668, 1805, 1853, 2054
SstI	GAGCTC	1 cut(s)	1641
StuI	AGGCCT	4 cut(s)	137, 564, 1860, 2028
StyD4I	CCNGG	7 cut(s)	66, 290, 669, 883, 1936, 2012, 2158
StyI	CCWWGG	3 cut(s)	132, 375, 1576
TaaI	ACNGT	3 cut(s)	181, 1363, 1750
TaiI	ACGT	1 cut(s)	543
TaqI	TCGA	5 cut(s)	84, 516, 771, 1971, 1989
TatI	WGTACW	4 cut(s)	232, 1720, 2040, 2092
TauI	GCSGC	3 cut(s)	96, 1167, 1293
TfiI	GAWTC	3 cut(s)	457, 1647, 2017
Tru1I	TTAA	9 cut(s)	8, 203, 501, 953, 1410, 1433, 1505, 1932, 2179
Tru9I	TTAA	9 cut(s)	8, 203, 501, 953, 1410, 1433, 1505, 1932, 2179
TscAI	CASTG	5 cut(s)	184, 244, 965, 1366, 2005
TseFI	GTSAC	1 cut(s)	444
TseI	GCWGC	3 cut(s)	40, 188, 1515
Tsp45I	GTSAC	1 cut(s)	444
TspDTI	ATGAA	9 cut(s)	77, 273, 371, 587, 800, 888, 1242, 1463, 1779
TspGWI	ACGGA	2 cut(s)	167, 2147
TspRI	CASTG	5 cut(s)	184, 244, 965, 1366, 2005
Tth111I	GACNNNGTC	1 cut(s)	1985
Vha464I	CTTAAG	3 cut(s)	202, 1409, 1432
VpaK11BI	GGWCC	2 cut(s)	25, 1573
XapI	RAATTY	4 cut(s)	74, 1157, 1312, 1494
XbaI	TCTAGA	1 cut(s)	604
XceI	RCATGY	2 cut(s)	944, 1736
XcmI	CCANNNNNNNNNTGG	1 cut(s)	965
XmaJI	CCTAGG	1 cut(s)	1576
XmiI	GTMKAC	3 cut(s)	1095, 1729, 2061
XspI	CTAG	9 cut(s)	605, 837, 1206, 1523, 1577, 1668, 1805, 1853, 2054
ZrmI	AGTACT	2 cut(s)	1722, 2042
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.