Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 92 | 2.6e-11 | Rx N-terminal domain |
| NB-ARC | PF00931 | 165 - 341 | 2.2e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 429 - 501 | 1.1e-17 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 552 - 795 | 3.6e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 700 - 798 | 2.4e-08 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1467 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 377 |
| Acc16I | TGCGCA | 1 cut(s) | 758 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1909 |
| AccBSI | CCGCTC | 1 cut(s) | 685 |
| AccI | GTMKAC | 1 cut(s) | 138 |
| AciI | CCGC | 4 cut(s) | 314, 685, 1492, 1514 |
| AclWI | GGATC | 6 cut(s) | 296, 309, 685, 698, 1446, 1806 |
| AcoI | YGGCCR | 4 cut(s) | 446, 2076, 2349, 2563 |
| AcsI | RAATTY | 5 cut(s) | 673, 951, 1172, 1702, 2545 |
| AcuI | CTGAAG | 6 cut(s) | 716, 992, 1131, 1314, 1789, 2250 |
| AfaI | GTAC | 1 cut(s) | 1451 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 250, 1096, 1360, 1909, 2017 |
| AflII | CTTAAG | 1 cut(s) | 2273 |
| AflIII | ACRYGT | 1 cut(s) | 916 |
| AhlI | ACTAGT | 3 cut(s) | 1408, 1432, 1933 |
| AjiI | CACGTC | 2 cut(s) | 364, 1788 |
| AjnI | CCWGG | 4 cut(s) | 801, 905, 1036, 1713 |
| Alw21I | GWGCWC | 2 cut(s) | 857, 2109 |
| Alw26I | GTCTC | 6 cut(s) | 670, 1063, 1262, 1283, 1782, 2395 |
| AlwI | GGATC | 6 cut(s) | 296, 309, 685, 698, 1446, 1806 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 404, 444 |
| AoxI | GGCC | 8 cut(s) | 21, 446, 815, 1087, 1345, 2076, 2349, 2563 |
| ApoI | RAATTY | 5 cut(s) | 673, 951, 1172, 1702, 2545 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1147, 1179 |
| AseI | ATTAAT | 2 cut(s) | 345, 768 |
| AspLEI | GCGC | 4 cut(s) | 55, 759, 1793, 2096 |
| AspS9I | GGNCC | 3 cut(s) | 1345, 1984, 2212 |
| AsuHPI | GGTGA | 3 cut(s) | 1052, 2044, 2080 |
| AsuII | TTCGAA | 2 cut(s) | 1015, 2137 |
| AvaII | GGWCC | 2 cut(s) | 1984, 2212 |
| AxyI | CCTNAGG | 1 cut(s) | 1724 |
| BalI | TGGCCA | 2 cut(s) | 448, 2565 |
| BamHI | GGATCC | 2 cut(s) | 301, 690 |
| BanII | GRGCYC | 2 cut(s) | 1367, 2109 |
| BbsI | GAAGAC | 5 cut(s) | 723, 987, 1302, 1617, 2030 |
| Bbv12I | GWGCWC | 2 cut(s) | 857, 2109 |
| BbvCI | CCTCAGC | 2 cut(s) | 1794, 2459 |
| BccI | CCATC | 8 cut(s) | 316, 440, 485, 568, 1440, 1448, 1587, 1957 |
| BceAI | ACGGC | 2 cut(s) | 8, 544 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1292, 1326, 2515, 2549 |
| BciT130I | CCWGG | 4 cut(s) | 803, 907, 1038, 1715 |
| BciVI | GTATCC | 2 cut(s) | 513, 2195 |
| BclI | TGATCA | 1 cut(s) | 1042 |
| BcoDI | GTCTC | 6 cut(s) | 670, 1063, 1262, 1283, 1782, 2395 |
| BcuI | ACTAGT | 3 cut(s) | 1408, 1432, 1933 |
| BfaI | CTAG | 7 cut(s) | 5, 1409, 1433, 1637, 1934, 2024, 2361 |
| BfmI | CTRYAG | 3 cut(s) | 48, 1223, 1377 |
| BfrI | CTTAAG | 1 cut(s) | 2273 |
| BfuI | GTATCC | 2 cut(s) | 513, 2195 |
| BlpI | GCTNAGC | 2 cut(s) | 1831, 2108 |
| Bme1390I | CCNGG | 4 cut(s) | 803, 907, 1038, 1715 |
| Bme18I | GGWCC | 2 cut(s) | 1984, 2212 |
| BmgBI | CACGTC | 2 cut(s) | 364, 1788 |
| BmgT120I | GGNCC | 3 cut(s) | 1345, 1984, 2212 |
| BmiI | GGNNCC | 4 cut(s) | 303, 692, 1598, 1712 |
| BmrFI | CCNGG | 4 cut(s) | 803, 907, 1038, 1715 |
| BmsI | GCATC | 8 cut(s) | 404, 900, 1300, 1409, 1542, 1913, 2215, 2268 |
| BpiI | GAAGAC | 5 cut(s) | 723, 987, 1302, 1617, 2030 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1840, 1872 |
| BpmI | CTGGAG | 3 cut(s) | 1736, 1764, 1886 |
| Bpu10I | CCTNAGC | 3 cut(s) | 200, 1794, 2459 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1831, 2108 |
| Bpu14I | TTCGAA | 2 cut(s) | 1015, 2137 |
| BpuEI | CTTGAG | 5 cut(s) | 113, 1244, 1867, 2192, 2506 |
| BsaJI | CCNNGG | 5 cut(s) | 735, 1036, 1987, 2016, 2423 |
| BsaWI | WCCGGW | 2 cut(s) | 304, 2054 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 839, 869 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 250, 1096, 1360, 1909, 2017 |
| Bse1I | ACTGG | 5 cut(s) | 1254, 1334, 1781, 2342, 2409 |
| Bse21I | CCTNAGG | 1 cut(s) | 1724 |
| Bse3DI | GCAATG | 3 cut(s) | 42, 555, 1271 |
| BseBI | CCWGG | 4 cut(s) | 803, 907, 1038, 1715 |
| BseDI | CCNNGG | 5 cut(s) | 735, 1036, 1987, 2016, 2423 |
| BseGI | GGATG | 6 cut(s) | 496, 579, 811, 1624, 1928, 2344 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 250, 1096, 1360, 1909, 2017 |
| BseMI | GCAATG | 3 cut(s) | 42, 555, 1271 |
| BseMII | CTCAG | 8 cut(s) | 77, 1119, 1738, 1785, 1871, 2122, 2305, 2450 |
| BseNI | ACTGG | 5 cut(s) | 1254, 1334, 1781, 2342, 2409 |
| BseRI | GAGGAG | 2 cut(s) | 1535, 2586 |
| BseYI | CCCAGC | 1 cut(s) | 987 |
| BsgI | GTGCAG | 2 cut(s) | 390, 2487 |
| BshFI | GGCC | 8 cut(s) | 23, 448, 817, 1089, 1347, 2078, 2351, 2565 |
| BsiHKAI | GWGCWC | 2 cut(s) | 857, 2109 |
| BsiSI | CCGG | 4 cut(s) | 305, 2055, 2075, 2348 |
| BslFI | GGGAC | 5 cut(s) | 374, 509, 1705, 1983, 2404 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 250, 1096, 1360, 1909, 2017 |
| BsmAI | GTCTC | 6 cut(s) | 670, 1063, 1262, 1283, 1782, 2395 |
| BsmFI | GGGAC | 5 cut(s) | 374, 509, 1705, 1983, 2404 |
| BsmI | GAATGC | 1 cut(s) | 1037 |
| BsnI | GGCC | 8 cut(s) | 23, 448, 817, 1089, 1347, 2078, 2351, 2565 |
| Bsp119I | TTCGAA | 2 cut(s) | 1015, 2137 |
| Bsp1286I | GDGCHC | 3 cut(s) | 857, 1367, 2109 |
| Bsp143I | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1831, 2108 |
| BspACI | CCGC | 4 cut(s) | 314, 685, 1492, 1514 |
| BspANI | GGCC | 8 cut(s) | 23, 448, 817, 1089, 1347, 2078, 2351, 2565 |
| BspCNI | CTCAG | 8 cut(s) | 76, 1120, 1737, 1786, 1870, 2121, 2304, 2451 |
| BspLI | GGNNCC | 4 cut(s) | 303, 692, 1598, 1712 |
| BspMAI | CTGCAG | 2 cut(s) | 52, 1227 |
| BspPI | GGATC | 6 cut(s) | 296, 309, 685, 698, 1446, 1806 |
| BspT104I | TTCGAA | 2 cut(s) | 1015, 2137 |
| BspTI | CTTAAG | 1 cut(s) | 2273 |
| BsrBI | CCGCTC | 1 cut(s) | 685 |
| BsrDI | GCAATG | 3 cut(s) | 42, 555, 1271 |
| BsrI | ACTGG | 5 cut(s) | 1254, 1334, 1781, 2342, 2409 |
| BssECI | CCNNGG | 5 cut(s) | 735, 1036, 1987, 2016, 2423 |
| BssMI | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| BssT1I | CCWWGG | 4 cut(s) | 735, 1987, 2016, 2423 |
| Bst2UI | CCWGG | 4 cut(s) | 803, 907, 1038, 1715 |
| Bst4CI | ACNGT | 3 cut(s) | 162, 782, 1320 |
| Bst6I | CTCTTC | 2 cut(s) | 1808, 1961 |
| BstAFI | CTTAAG | 1 cut(s) | 2273 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 44, 401 |
| BstBI | TTCGAA | 2 cut(s) | 1015, 2137 |
| BstC8I | GCNNGC | 5 cut(s) | 446, 683, 1424, 2502, 2567 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| BstF5I | GGATG | 6 cut(s) | 496, 579, 811, 1624, 1928, 2344 |
| BstHHI | GCGC | 4 cut(s) | 55, 759, 1793, 2096 |
| BstKTI | GATC | 7 cut(s) | 169, 180, 304, 693, 1045, 1441, 1801 |
| BstMAI | GTCTC | 6 cut(s) | 670, 1063, 1262, 1283, 1782, 2395 |
| BstMBI | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 29, 44, 59, 227, 401, 1552, 1579, 2278 |
| BstNI | CCWGG | 4 cut(s) | 803, 907, 1038, 1715 |
| BstNSI | RCATGY | 1 cut(s) | 1839 |
| BstSCI | CCNGG | 4 cut(s) | 801, 905, 1036, 1713 |
| BstSFI | CTRYAG | 3 cut(s) | 48, 1223, 1377 |
| BstV2I | GAAGAC | 5 cut(s) | 723, 987, 1302, 1617, 2030 |
| BstX2I | RGATCY | 3 cut(s) | 301, 690, 1798 |
| BstYI | RGATCY | 3 cut(s) | 301, 690, 1798 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1724 |
| BsuI | GTATCC | 2 cut(s) | 513, 2195 |
| BsuRI | GGCC | 8 cut(s) | 23, 448, 817, 1089, 1347, 2078, 2351, 2565 |
| BtgZI | GCGATG | 1 cut(s) | 1459 |
| BtrI | CACGTC | 2 cut(s) | 364, 1788 |
| BtsCI | GGATG | 6 cut(s) | 496, 579, 811, 1624, 1928, 2344 |
| BtsIMutI | CAGTG | 5 cut(s) | 1006, 1327, 1788, 2157, 2416 |
| Cac8I | GCNNGC | 5 cut(s) | 446, 683, 1424, 2502, 2567 |
| CaiI | CAGNNNCTG | 2 cut(s) | 404, 444 |
| CfoI | GCGC | 4 cut(s) | 55, 759, 1793, 2096 |
| Cfr13I | GGNCC | 3 cut(s) | 1345, 1984, 2212 |
| CseI | GACGC | 1 cut(s) | 149 |
| Csp6I | GTAC | 1 cut(s) | 1450 |
| CviAII | CATG | 8 cut(s) | 285, 368, 1178, 1568, 1615, 1672, 1836, 2515 |
| CviQI | GTAC | 1 cut(s) | 1450 |
| DpnI | GATC | 7 cut(s) | 168, 179, 303, 692, 1044, 1440, 1800 |
| DpnII | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| DraI | TTTAAA | 1 cut(s) | 1051 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 377 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 377 |
| EaeI | YGGCCR | 4 cut(s) | 446, 2076, 2349, 2563 |
| Eam1104I | CTCTTC | 2 cut(s) | 1808, 1961 |
| EarI | CTCTTC | 2 cut(s) | 1808, 1961 |
| Ecl136II | GAGCTC | 1 cut(s) | 2107 |
| Eco130I | CCWWGG | 4 cut(s) | 735, 1987, 2016, 2423 |
| Eco24I | GRGCYC | 2 cut(s) | 1367, 2109 |
| Eco32I | GATATC | 1 cut(s) | 1813 |
| Eco47I | GGWCC | 2 cut(s) | 1984, 2212 |
| Eco53kI | GAGCTC | 1 cut(s) | 2107 |
| Eco57I | CTGAAG | 6 cut(s) | 716, 992, 1131, 1314, 1789, 2250 |
| Eco81I | CCTNAGG | 1 cut(s) | 1724 |
| EcoICRI | GAGCTC | 1 cut(s) | 2107 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1345, 2212 |
| EcoRII | CCWGG | 4 cut(s) | 801, 905, 1036, 1713 |
| EcoRV | GATATC | 1 cut(s) | 1813 |
| EcoT14I | CCWWGG | 4 cut(s) | 735, 1987, 2016, 2423 |
| EcoT22I | ATGCAT | 1 cut(s) | 1012 |
| EcoT38I | GRGCYC | 2 cut(s) | 1367, 2109 |
| ErhI | CCWWGG | 4 cut(s) | 735, 1987, 2016, 2423 |
| FaeI | CATG | 8 cut(s) | 288, 371, 1181, 1571, 1618, 1675, 1839, 2518 |
| FaqI | GGGAC | 5 cut(s) | 374, 509, 1705, 1983, 2404 |
| FatI | CATG | 8 cut(s) | 284, 367, 1177, 1567, 1614, 1671, 1835, 2514 |
| FauI | CCCGC | 4 cut(s) | 321, 678, 1485, 1507 |
| FauNDI | CATATG | 1 cut(s) | 481 |
| FbaI | TGATCA | 1 cut(s) | 1042 |
| FblI | GTMKAC | 1 cut(s) | 138 |
| FokI | GGATG | 6 cut(s) | 503, 586, 818, 1631, 1935, 2331 |
| FriOI | GRGCYC | 2 cut(s) | 1367, 2109 |
| FspBI | CTAG | 7 cut(s) | 5, 1409, 1433, 1637, 1934, 2024, 2361 |
| FspI | TGCGCA | 1 cut(s) | 758 |
| GlaI | GCGC | 4 cut(s) | 54, 758, 1792, 2095 |
| GsaI | CCCAGC | 1 cut(s) | 991 |
| GsuI | CTGGAG | 3 cut(s) | 1736, 1764, 1886 |
| HaeIII | GGCC | 8 cut(s) | 23, 448, 817, 1089, 1347, 2078, 2351, 2565 |
| HapII | CCGG | 4 cut(s) | 305, 2055, 2075, 2348 |
| HgaI | GACGC | 1 cut(s) | 149 |
| HhaI | GCGC | 4 cut(s) | 55, 759, 1793, 2096 |
| Hin1II | CATG | 8 cut(s) | 288, 371, 1181, 1571, 1618, 1675, 1839, 2518 |
| Hin6I | GCGC | 4 cut(s) | 53, 757, 1791, 2094 |
| HinP1I | GCGC | 4 cut(s) | 53, 757, 1791, 2094 |
| HincII | GTYRAC | 2 cut(s) | 139, 718 |
| HindII | GTYRAC | 2 cut(s) | 139, 718 |
| HindIII | AAGCTT | 2 cut(s) | 1117, 2354 |
| HpaI | GTTAAC | 1 cut(s) | 718 |
| HpaII | CCGG | 4 cut(s) | 305, 2055, 2075, 2348 |
| HphI | GGTGA | 3 cut(s) | 1052, 2044, 2080 |
| Hpy166II | GTNNAC | 4 cut(s) | 139, 336, 461, 718 |
| Hpy8I | GTNNAC | 4 cut(s) | 139, 336, 461, 718 |
| Hpy99I | CGWCG | 2 cut(s) | 143, 536 |
| HpyAV | CCTTC | 7 cut(s) | 532, 1100, 1126, 1155, 1187, 1624, 2108 |
| HpyCH4III | ACNGT | 3 cut(s) | 162, 782, 1320 |
| HpyCH4IV | ACGT | 5 cut(s) | 363, 720, 728, 918, 1787 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 29, 44, 59, 227, 401, 1552, 1579, 2278 |
| HpySE526I | ACGT | 5 cut(s) | 363, 720, 728, 918, 1787 |
| Hsp92II | CATG | 8 cut(s) | 288, 371, 1181, 1571, 1618, 1675, 1839, 2518 |
| HspAI | GCGC | 4 cut(s) | 53, 757, 1791, 2094 |
| Ksp22I | TGATCA | 1 cut(s) | 1042 |
| KspAI | GTTAAC | 1 cut(s) | 718 |
| Kzo9I | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| LmnI | GCTCC | 2 cut(s) | 860, 2296 |
| LweI | GCATC | 8 cut(s) | 404, 900, 1300, 1409, 1542, 1913, 2215, 2268 |
| MaeI | CTAG | 7 cut(s) | 5, 1409, 1433, 1637, 1934, 2024, 2361 |
| MaeII | ACGT | 5 cut(s) | 363, 720, 728, 918, 1787 |
| MaeIII | GTNAC | 7 cut(s) | 25, 702, 1411, 1783, 1870, 2390, 2411 |
| MalI | GATC | 7 cut(s) | 168, 179, 303, 692, 1044, 1440, 1800 |
| MbiI | CCGCTC | 1 cut(s) | 685 |
| MboI | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| MflI | RGATCY | 3 cut(s) | 301, 690, 1798 |
| MhlI | GDGCHC | 3 cut(s) | 857, 1367, 2109 |
| MlsI | TGGCCA | 2 cut(s) | 448, 2565 |
| MluNI | TGGCCA | 2 cut(s) | 448, 2565 |
| MlyI | GAGTC | 4 cut(s) | 756, 1199, 1727, 2426 |
| MmeI | TCCRAC | 1 cut(s) | 1713 |
| Mox20I | TGGCCA | 2 cut(s) | 448, 2565 |
| Mph1103I | ATGCAT | 1 cut(s) | 1012 |
| MscI | TGGCCA | 2 cut(s) | 448, 2565 |
| Msp20I | TGGCCA | 2 cut(s) | 448, 2565 |
| MspA1I | CMGCKG | 4 cut(s) | 401, 444, 888, 987 |
| MspCI | CTTAAG | 1 cut(s) | 2273 |
| MspI | CCGG | 4 cut(s) | 305, 2055, 2075, 2348 |
| MspR9I | CCNGG | 4 cut(s) | 803, 907, 1038, 1715 |
| Mva1269I | GAATGC | 1 cut(s) | 1037 |
| MvaI | CCWGG | 4 cut(s) | 803, 907, 1038, 1715 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 29, 44, 59, 227, 401, 1552, 1579, 2278 |
| NdeI | CATATG | 1 cut(s) | 481 |
| NdeII | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| NlaIII | CATG | 8 cut(s) | 288, 371, 1181, 1571, 1618, 1675, 1839, 2518 |
| NlaIV | GGNNCC | 4 cut(s) | 303, 692, 1598, 1712 |
| NmuCI | GTSAC | 5 cut(s) | 1411, 1783, 1870, 2390, 2411 |
| NsbI | TGCGCA | 1 cut(s) | 758 |
| NsiI | ATGCAT | 1 cut(s) | 1012 |
| NspI | RCATGY | 1 cut(s) | 1839 |
| NspV | TTCGAA | 2 cut(s) | 1015, 2137 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 369, 1597 |
| PctI | GAATGC | 1 cut(s) | 1037 |
| PfeI | GAWTC | 6 cut(s) | 620, 1324, 2058, 2071, 2196, 2287 |
| PflFI | GACNNNGTC | 1 cut(s) | 1208 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1909 |
| PfoI | TCCNGGA | 2 cut(s) | 801, 1713 |
| PleI | GAGTC | 4 cut(s) | 756, 1199, 1726, 2425 |
| PpsI | GAGTC | 4 cut(s) | 756, 1199, 1726, 2425 |
| PpuMI | RGGWCCY | 1 cut(s) | 2212 |
| PshBI | ATTAAT | 2 cut(s) | 345, 768 |
| PsiI | TTATAA | 1 cut(s) | 1467 |
| Psp124BI | GAGCTC | 1 cut(s) | 2109 |
| Psp5II | RGGWCCY | 1 cut(s) | 2212 |
| Psp6I | CCWGG | 4 cut(s) | 801, 905, 1036, 1713 |
| PspFI | CCCAGC | 1 cut(s) | 987 |
| PspGI | CCWGG | 4 cut(s) | 801, 905, 1036, 1713 |
| PspN4I | GGNNCC | 4 cut(s) | 303, 692, 1598, 1712 |
| PspPI | GGNCC | 3 cut(s) | 1345, 1984, 2212 |
| PspPPI | RGGWCCY | 1 cut(s) | 2212 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 32 |
| PstI | CTGCAG | 2 cut(s) | 52, 1227 |
| PstNI | CAGNNNCTG | 2 cut(s) | 404, 444 |
| PsuI | RGATCY | 3 cut(s) | 301, 690, 1798 |
| PsyI | GACNNNGTC | 1 cut(s) | 1208 |
| PvuII | CAGCTG | 4 cut(s) | 401, 444, 888, 987 |
| RsaI | GTAC | 1 cut(s) | 1451 |
| RsaNI | GTAC | 1 cut(s) | 1450 |
| SacI | GAGCTC | 1 cut(s) | 2109 |
| SalI | GTCGAC | 1 cut(s) | 137 |
| Sau3AI | GATC | 7 cut(s) | 166, 177, 301, 690, 1042, 1438, 1798 |
| Sau96I | GGNCC | 3 cut(s) | 1345, 1984, 2212 |
| SchI | GAGTC | 4 cut(s) | 756, 1199, 1727, 2426 |
| ScrFI | CCNGG | 4 cut(s) | 803, 907, 1038, 1715 |
| SduI | GDGCHC | 3 cut(s) | 857, 1367, 2109 |
| SfaNI | GCATC | 8 cut(s) | 404, 900, 1300, 1409, 1542, 1913, 2215, 2268 |
| SfcI | CTRYAG | 3 cut(s) | 48, 1223, 1377 |
| SfuI | TTCGAA | 2 cut(s) | 1015, 2137 |
| SinI | GGWCC | 2 cut(s) | 1984, 2212 |
| SmlI | CTYRAG | 6 cut(s) | 92, 1259, 1846, 2207, 2273, 2485 |
| SmoI | CTYRAG | 6 cut(s) | 92, 1259, 1846, 2207, 2273, 2485 |
| SpeI | ACTAGT | 3 cut(s) | 1408, 1432, 1933 |
| SsiI | CCGC | 4 cut(s) | 314, 685, 1492, 1514 |
| SspI | AATATT | 2 cut(s) | 188, 753 |
| SspMI | CTAG | 7 cut(s) | 5, 1409, 1433, 1637, 1934, 2024, 2361 |
| SstI | GAGCTC | 1 cut(s) | 2109 |
| StyD4I | CCNGG | 4 cut(s) | 801, 905, 1036, 1713 |
| StyI | CCWWGG | 4 cut(s) | 735, 1987, 2016, 2423 |
| TaaI | ACNGT | 3 cut(s) | 162, 782, 1320 |
| TaiI | ACGT | 5 cut(s) | 366, 723, 731, 921, 1790 |
| TaqI | TCGA | 7 cut(s) | 138, 1015, 1302, 1758, 2137, 2382, 2535 |
| TfiI | GAWTC | 6 cut(s) | 620, 1324, 2058, 2071, 2196, 2287 |
| TscAI | CASTG | 5 cut(s) | 1006, 1334, 1788, 2164, 2416 |
| TseFI | GTSAC | 5 cut(s) | 1411, 1783, 1870, 2390, 2411 |
| Tsp45I | GTSAC | 5 cut(s) | 1411, 1783, 1870, 2390, 2411 |
| TspGWI | ACGGA | 3 cut(s) | 251, 1051, 1589 |
| TspRI | CASTG | 5 cut(s) | 1006, 1334, 1788, 2164, 2416 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1208 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1909 |
| Vha464I | CTTAAG | 1 cut(s) | 2273 |
| VpaK11BI | GGWCC | 2 cut(s) | 1984, 2212 |
| VspI | ATTAAT | 2 cut(s) | 345, 768 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| XapI | RAATTY | 5 cut(s) | 673, 951, 1172, 1702, 2545 |
| XbaI | TCTAGA | 1 cut(s) | 2360 |
| XceI | RCATGY | 1 cut(s) | 1839 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1423 |
| XmiI | GTMKAC | 1 cut(s) | 138 |
| XspI | CTAG | 7 cut(s) | 5, 1409, 1433, 1637, 1934, 2024, 2361 |
| Zsp2I | ATGCAT | 1 cut(s) | 1012 |