Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000540

Physical Location & Seq

Genomic Coordinates Reverse (-)

96016951 .. 96024902

Gene Structure 7952 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00075210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGATCTGGGTGTCTGTTTCACAGAACTTTAGTATGAGGCGGATTCTGAAGTGCATGCTGGAAAAGGCAAATCTGCAAGCAGCGGATGTTTCCGAATCTGATGACATGTTCACCAGCCTTAGACAAGGACTTAAAGATCAATCCTATCTCATTGTCATGGATGATGTGTGGCCTCATAAAAATTTAAGTAGTTTTTGGACCAACCTCTTTGACTCGCTACCAGCAAAAGTTGATAAAAGCAGCTGCATCATAATTACTACAAGGGATCGAGACGTTGCAAGAGTCATGGTGCACCAAGACTCACAAATACTTGAGCCCCCTATTCTGAATGACAGGGACAGCTGGTCTTTGTTCAGCGGATTTGCATTTCGATCAACCAAGGGAGAATGCCCGGATGAGAGCTTTGAGGAGGAAGGACATGCTATCGTGAAGAGATGTGGTGGGCTTCCACTGGCAATCAAGACATTAGGAGGTTATTTGGCCAAGGAGAGTCGTCCTTCTGAGTGGACCAAGACAAAAGAAAAATTTCATTCATTGACTACCGATGGAAAAACAGAATCACTTATGCTTTGTCTACAAGTGAGCTATGATGAACTTCCAAACGATATGAAGCAATGCCTATTGTGTCTCTCCGTTTATCCTGAAGACTTTGAGATACACGCTGATCAGCTAATTCACTGGTGGTTTGGAGAGGGCCTTATCCGGGGCAAGAAAGGCGACTCAAAAACAGCAGTAGAAGTGGGCTACGAAAATCTGGCAAAACTAGCCAATAGATGCCTATTGGAAGTCGTGGAGCGCCGAGGCTATGATGGAAGGATTATTAAGTTCAAATTACACGATATGGTACGGGAGTTAATAATCAGGATTGCAGAAAAAGAGAAATTTTGCAGCTTCAGCGAAGAATGTACGCAGATAGGGATTGAAGACTCTCGGTGGTTATGTCTCACTGAAGAGATGGCAGCTGAGGTTAAGAAGCCATGGATCAAAAGAAAGTCAAAGATGAGGTCACTTTTACTGATGTCAAGCCCTTCATTGGTTGACTTCAGCAAGAACTTTGAGTTGTTGGAGTCACTCAGGGTATTGGACTTGTCTTTCTCGAAGTTAGATGTGATTATTGTTGAAGATAGCAACACAGCCTCTTCAGGGATTTGTGTAGAGAAGCTCTTCGACATGATCACTTCTCTGAAACGCCTAGCATGTCTAAACCTCAGTGGAGTTCAGAAACTATTAGAACTGCCATCTTCGATTGAGAAACTCCTTAACCTCCAGGTCTTGGTGTTGAATGGATGCAGAAATTTGGGCAAAATACACGCCAAAACCACAAGTTTGAAGAGGCTTGTTGTCTTGGACATTGGAACATGTCCCCTCGAGCACCTGCCTCGGGACCTAGGGAGCCTCTCTTATCTTCAAGAACTCTCTGGATTCAGGGTGGAAAGTCGGGCTAAAACACAGGGTTGCACCCTTCTTGAGCTTGGAAAACTGAAGCAGCTAAGAGTTCTTCGAATTACAATAGGTGATGTGGCTGAAATCTCCGAAAACGAAAAGAAGAGCCTATCAAGTCTCCAGAACCTCAAGGTTCTAGCTATTGATGCTGCAGATACATGCAATCAAGAAGATCTGGAAATGATAGATGAGCTGGAGTTGCCTCGAAAGATAGAGGAGCTGTATCTCAGGAATTACCGCTCCCGAAAAATGCCAAACTGGTTTAGTCCCTTGAGGCTTCCTAAATTGCATTATCTTTCTATTGAGGATTGCGACGTTGAAAGCCTAAAGGACAACTGCCGTTGGAAAATTGAAGGTTTGTATTTAAAATTGTTAAATATGTTAGAGGTAGACTGGAATGACTTGAAGAGGGTTGTGCCAGCATTACGCTACATGGAGATTAGCAGATGTTCCAAATTGAAAAACTTTCCCATTGACGTTGTCAATCCAGGGGTTTGGAGAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0023052 GO:0042742 GO:0043207 GO:0043621 GO:0044464 GO:0050789 GO:0050794 GO:0050829 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

649

Amino Acids

74.36

Weight (kDa)

6.61

Isoelectric Point (pI)

51.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	1 - 126	4.3e-21	NB-ARC domain
WHD_DRP	PF23559	212 - 286	5.2e-14	Disease resistance protein Winged helix domain
LRR_14	PF23598	350 - 583	1.5e-24	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	490 - 591	1.4e-10	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000540)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50950 AT3G50950
fragaria_vesca	FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica	MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica	Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis	pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis	RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata	RLG00000017001
rosa_multiflora	Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii	Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa	Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha	Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana	Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1383
Acc36I	ACCTGC	1 cut(s)	1383
AccB7I	CCANNNNNTGG	1 cut(s)	1273
AccBSI	CCGCTC	1 cut(s)	1683
AccI	GTMKAC	2 cut(s)	574, 1833
AciI	CCGC	4 cut(s)	40, 83, 357, 1681
AclWI	GGATC	2 cut(s)	273, 989
AcoI	YGGCCR	1 cut(s)	480
AcsI	RAATTY	4 cut(s)	181, 524, 881, 1294
AcuI	CTGAAG	7 cut(s)	68, 663, 877, 969, 1027, 1125, 1502
AfaI	GTAC	2 cut(s)	846, 907
AfiI	CCNNNNNNNGG	5 cut(s)	703, 1033, 1143, 1273, 1381
AflIII	ACRYGT	2 cut(s)	105, 1358
AhdI	GACNNNNNGTC	1 cut(s)	343
AjnI	CCWGG	2 cut(s)	1266, 1930
Alw21I	GWGCWC	2 cut(s)	294, 1374
Alw26I	GTCTC	4 cut(s)	264, 632, 947, 1565
Alw44I	GTGCAC	1 cut(s)	290
AlwI	GGATC	2 cut(s)	273, 989
Ama87I	CYCGRG	2 cut(s)	1367, 1380
AoxI	GGCC	3 cut(s)	170, 480, 694
ApaLI	GTGCAC	1 cut(s)	290
ApeKI	GCWGC	7 cut(s)	80, 240, 243, 888, 959, 1486, 1592
ApoI	RAATTY	4 cut(s)	181, 524, 881, 1294
ArsI	GACNNNNNNTTYG	2 cut(s)	989, 1021
Asp700I	GAANNNNTTC	2 cut(s)	525, 1163
AspA2I	CCTAGG	1 cut(s)	1387
AspLEI	GCGC	1 cut(s)	798
AspS9I	GGNCC	4 cut(s)	198, 507, 694, 1384
AsuC2I	CCSGG	2 cut(s)	392, 704
AsuHPI	GGTGA	2 cut(s)	103, 1526
AsuII	TTCGAA	1 cut(s)	1501
AvaI	CYCGRG	2 cut(s)	1367, 1380
AvaII	GGWCC	3 cut(s)	198, 507, 1384
AvrII	CCTAGG	1 cut(s)	1387
BaeGI	GKGCMC	1 cut(s)	294
BaeI	ACNNNNGTAYC	2 cut(s)	836, 869
BalI	TGGCCA	1 cut(s)	482
BanII	GRGCYC	1 cut(s)	318
BbsI	GAAGAC	2 cut(s)	651, 930
Bbv12I	GWGCWC	2 cut(s)	294, 1374
BbvCI	CCTCAGC	1 cut(s)	963
BbvI	GCAGC	7 cut(s)	92, 230, 252, 900, 971, 1498, 1579
BccI	CCATC	4 cut(s)	539, 803, 949, 1246
BceAI	ACGGC	1 cut(s)	1767
BcgI	CGANNNNNNTGC	2 cut(s)	1361, 1395
BciT130I	CCWGG	2 cut(s)	1268, 1932
BclI	TGATCA	2 cut(s)	664, 1173
BcnI	CCSGG	2 cut(s)	392, 704
BcoDI	GTCTC	4 cut(s)	264, 632, 947, 1565
BfaI	CTAG	4 cut(s)	764, 1193, 1388, 1580
BfmI	CTRYAG	1 cut(s)	1593
BfoI	RGCGCY	1 cut(s)	799
BfuAI	ACCTGC	1 cut(s)	1383
BglII	AGATCT	1 cut(s)	1615
BisI	GCNGC	7 cut(s)	81, 241, 244, 889, 960, 1487, 1593
BlnI	CCTAGG	1 cut(s)	1387
BlsI	GCNGC	7 cut(s)	82, 242, 245, 890, 961, 1488, 1594
Bme1390I	CCNGG	4 cut(s)	392, 704, 1268, 1932
Bme18I	GGWCC	3 cut(s)	198, 507, 1384
BmeRI	GACNNNNNGTC	1 cut(s)	343
BmeT110I	CYCGRG	2 cut(s)	1367, 1380
BmgT120I	GGNCC	4 cut(s)	198, 507, 694, 1384
BmiI	GGNNCC	2 cut(s)	1385, 1394
BmrFI	CCNGG	4 cut(s)	392, 704, 1268, 1932
BmsI	GCATC	4 cut(s)	255, 764, 1277, 1579
BpiI	GAAGAC	2 cut(s)	651, 930
BpmI	CTGGAG	3 cut(s)	1250, 1547, 1658
Bpu10I	CCTNAGC	1 cut(s)	963
Bpu14I	TTCGAA	1 cut(s)	1501
BpuEI	CTTGAG	4 cut(s)	332, 1487, 1556, 1735
BpuMI	CCSGG	2 cut(s)	392, 704
BsaJI	CCNNGG	8 cut(s)	378, 483, 703, 799, 977, 1379, 1387, 1931
Bsc4I	CCNNNNNNNGG	5 cut(s)	703, 1033, 1143, 1273, 1381
Bse1I	ACTGG	4 cut(s)	456, 683, 1706, 1841
Bse3DI	GCAATG	1 cut(s)	620
BseBI	CCWGG	2 cut(s)	1268, 1932
BseDI	CCNNGG	8 cut(s)	378, 483, 703, 799, 977, 1379, 1387, 1931
BseGI	GGATG	4 cut(s)	91, 166, 400, 1292
BseLI	CCNNNNNNNGG	5 cut(s)	703, 1033, 1143, 1273, 1381
BseMI	GCAATG	1 cut(s)	620
BseMII	CTCAG	5 cut(s)	492, 954, 1087, 1222, 1684
BseNI	ACTGG	4 cut(s)	456, 683, 1706, 1841
BseRI	GAGGAG	2 cut(s)	422, 1673
BseSI	GKGCMC	1 cut(s)	294
BseXI	GCAGC	7 cut(s)	92, 230, 252, 900, 971, 1498, 1579
BshFI	GGCC	3 cut(s)	172, 482, 696
BsiHKAI	GWGCWC	2 cut(s)	294, 1374
BsiHKCI	CYCGRG	2 cut(s)	1367, 1380
BsiSI	CCGG	2 cut(s)	392, 703
BslFI	GGGAC	4 cut(s)	350, 1347, 1397, 1695
BslI	CCNNNNNNNGG	5 cut(s)	703, 1033, 1143, 1273, 1381
BsmAI	GTCTC	4 cut(s)	264, 632, 947, 1565
BsmBI	CGTCTC	1 cut(s)	264
BsmFI	GGGAC	4 cut(s)	350, 1347, 1397, 1695
BsmI	GAATGC	1 cut(s)	392
BsnI	GGCC	3 cut(s)	172, 482, 696
BsoBI	CYCGRG	2 cut(s)	1367, 1380
Bsp119I	TTCGAA	1 cut(s)	1501
Bsp1286I	GDGCHC	3 cut(s)	294, 318, 1374
Bsp143I	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
Bsp19I	CCATGG	1 cut(s)	977
BspACI	CCGC	4 cut(s)	40, 83, 357, 1681
BspANI	GGCC	3 cut(s)	172, 482, 696
BspCNI	CTCAG	5 cut(s)	493, 955, 1086, 1221, 1683
BspLI	GGNNCC	2 cut(s)	1385, 1394
BspMAI	CTGCAG	1 cut(s)	1597
BspMI	ACCTGC	1 cut(s)	1383
BspPI	GGATC	2 cut(s)	273, 989
BspQI	GCTCTTC	2 cut(s)	1169, 1541
BspT104I	TTCGAA	1 cut(s)	1501
BsrBI	CCGCTC	1 cut(s)	1683
BsrDI	GCAATG	1 cut(s)	620
BsrI	ACTGG	4 cut(s)	456, 683, 1706, 1841
BssECI	CCNNGG	8 cut(s)	378, 483, 703, 799, 977, 1379, 1387, 1931
BssMI	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
BssT1I	CCWWGG	4 cut(s)	378, 483, 977, 1387
Bst2UI	CCWGG	2 cut(s)	1268, 1932
Bst6I	CTCTTC	7 cut(s)	425, 945, 1144, 1169, 1325, 1541, 1844
BstBI	TTCGAA	1 cut(s)	1501
BstC8I	GCNNGC	3 cut(s)	56, 78, 1863
BstDEI	CTNAG	7 cut(s)	119, 501, 963, 1073, 1208, 1490, 1670
BstDSI	CCRYGG	1 cut(s)	977
BstF5I	GGATG	4 cut(s)	91, 166, 400, 1292
BstH2I	RGCGCY	1 cut(s)	799
BstHHI	GCGC	1 cut(s)	798
BstKTI	GATC	8 cut(s)	6, 139, 268, 374, 667, 984, 1176, 1618
BstMAI	GTCTC	4 cut(s)	264, 632, 947, 1565
BstMBI	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
BstMWI	GCNNNNNNNGC	5 cut(s)	714, 764, 894, 1589, 1642
BstNI	CCWGG	2 cut(s)	1268, 1932
BstNSI	RCATGY	6 cut(s)	58, 109, 422, 1200, 1362, 1605
BstSCI	CCNGG	4 cut(s)	390, 702, 1266, 1930
BstSFI	CTRYAG	1 cut(s)	1593
BstSLI	GKGCMC	1 cut(s)	294
BstV1I	GCAGC	7 cut(s)	92, 230, 252, 900, 971, 1498, 1579
BstV2I	GAAGAC	2 cut(s)	651, 930
BstX2I	RGATCY	1 cut(s)	1615
BstXI	CCANNNNNNTGG	1 cut(s)	1938
BstYI	RGATCY	1 cut(s)	1615
BsuRI	GGCC	3 cut(s)	172, 482, 696
BtgI	CCRYGG	1 cut(s)	977
BtsCI	GGATG	4 cut(s)	91, 166, 400, 1292
BtsIMutI	CAGTG	4 cut(s)	449, 676, 945, 1216
BveI	ACCTGC	1 cut(s)	1383
Cac8I	GCNNGC	3 cut(s)	56, 78, 1863
CfoI	GCGC	1 cut(s)	798
Cfr13I	GGNCC	4 cut(s)	198, 507, 694, 1384
Csp6I	GTAC	2 cut(s)	845, 906
CviQI	GTAC	2 cut(s)	845, 906
DdeI	CTNAG	7 cut(s)	119, 501, 963, 1073, 1208, 1490, 1670
DpnI	GATC	8 cut(s)	5, 138, 267, 373, 666, 983, 1175, 1617
DpnII	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
DraI	TTTAAA	1 cut(s)	1809
DriI	GACNNNNNGTC	1 cut(s)	343
EaeI	YGGCCR	1 cut(s)	480
Eam1104I	CTCTTC	7 cut(s)	425, 945, 1144, 1169, 1325, 1541, 1844
Eam1105I	GACNNNNNGTC	1 cut(s)	343
EarI	CTCTTC	7 cut(s)	425, 945, 1144, 1169, 1325, 1541, 1844
EciI	GGCGGA	1 cut(s)	55
Eco130I	CCWWGG	4 cut(s)	378, 483, 977, 1387
Eco24I	GRGCYC	1 cut(s)	318
Eco47I	GGWCC	3 cut(s)	198, 507, 1384
Eco57I	CTGAAG	7 cut(s)	68, 663, 877, 969, 1027, 1125, 1502
Eco88I	CYCGRG	2 cut(s)	1367, 1380
EcoO109I	RGGNCCY	2 cut(s)	694, 1384
EcoRII	CCWGG	2 cut(s)	1266, 1930
EcoT14I	CCWWGG	4 cut(s)	378, 483, 977, 1387
EcoT38I	GRGCYC	1 cut(s)	318
ErhI	CCWWGG	4 cut(s)	378, 483, 977, 1387
Esp3I	CGTCTC	1 cut(s)	264
FaqI	GGGAC	4 cut(s)	350, 1347, 1397, 1695
FbaI	TGATCA	2 cut(s)	664, 1173
FblI	GTMKAC	2 cut(s)	574, 1833
Fnu4HI	GCNGC	7 cut(s)	81, 241, 244, 889, 960, 1487, 1593
FokI	GGATG	4 cut(s)	98, 173, 407, 1299
FriOI	GRGCYC	1 cut(s)	318
Fsp4HI	GCNGC	7 cut(s)	81, 241, 244, 889, 960, 1487, 1593
FspBI	CTAG	4 cut(s)	764, 1193, 1388, 1580
GlaI	GCGC	1 cut(s)	797
GluI	GCNGC	7 cut(s)	81, 241, 244, 889, 960, 1487, 1593
GsuI	CTGGAG	3 cut(s)	1250, 1547, 1658
HaeII	RGCGCY	1 cut(s)	799
HaeIII	GGCC	3 cut(s)	172, 482, 696
HapII	CCGG	2 cut(s)	392, 703
HhaI	GCGC	1 cut(s)	798
Hin6I	GCGC	1 cut(s)	796
HinP1I	GCGC	1 cut(s)	796
HincII	GTYRAC	1 cut(s)	1039
HindII	GTYRAC	1 cut(s)	1039
HpaII	CCGG	2 cut(s)	392, 703
HphI	GGTGA	2 cut(s)	103, 1526
Hpy166II	GTNNAC	6 cut(s)	111, 292, 507, 575, 1039, 1834
Hpy188I	TCNGA	8 cut(s)	48, 94, 100, 327, 502, 1185, 1221, 1534
Hpy8I	GTNNAC	6 cut(s)	111, 292, 507, 575, 1039, 1834
Hpy99I	CGWCG	1 cut(s)	1760
HpyAV	CCTTC	6 cut(s)	407, 507, 807, 1038, 1472, 1790
HpyCH4IV	ACGT	3 cut(s)	273, 1758, 1920
HpyF10VI	GCNNNNNNNGC	5 cut(s)	714, 764, 894, 1589, 1642
HpyF3I	CTNAG	7 cut(s)	119, 501, 963, 1073, 1208, 1490, 1670
HpySE526I	ACGT	3 cut(s)	273, 1758, 1920
HspAI	GCGC	1 cut(s)	796
Ksp22I	TGATCA	2 cut(s)	664, 1173
Kzo9I	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
LguI	GCTCTTC	2 cut(s)	1169, 1541
LmnI	GCTCC	4 cut(s)	793, 1392, 1660, 1688
Lsp1109I	GCAGC	7 cut(s)	92, 230, 252, 900, 971, 1498, 1579
LweI	GCATC	4 cut(s)	255, 764, 1277, 1579
MaeI	CTAG	4 cut(s)	764, 1193, 1388, 1580
MaeII	ACGT	3 cut(s)	273, 1758, 1920
MaeIII	GTNAC	2 cut(s)	1005, 1068
MalI	GATC	8 cut(s)	5, 138, 267, 373, 666, 983, 1175, 1617
MbiI	CCGCTC	1 cut(s)	1683
MboI	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
MflI	RGATCY	1 cut(s)	1615
MhlI	GDGCHC	3 cut(s)	294, 318, 1374
MlsI	TGGCCA	1 cut(s)	482
MluNI	TGGCCA	1 cut(s)	482
MlyI	GAGTC	7 cut(s)	206, 291, 293, 499, 713, 920, 1076
MmeI	TCCRAC	2 cut(s)	1044, 1766
Mox20I	TGGCCA	1 cut(s)	482
MroXI	GAANNNNTTC	2 cut(s)	525, 1163
MscI	TGGCCA	1 cut(s)	482
MseI	TTAA	8 cut(s)	132, 185, 822, 854, 969, 1260, 1808, 1817
MslI	CAYNNNNRTG	1 cut(s)	155
Msp20I	TGGCCA	1 cut(s)	482
MspA1I	CMGCKG	5 cut(s)	83, 243, 342, 357, 962
MspI	CCGG	2 cut(s)	392, 703
MspR9I	CCNGG	4 cut(s)	392, 704, 1268, 1932
Mva1269I	GAATGC	1 cut(s)	392
MvaI	CCWGG	2 cut(s)	1268, 1932
MwoI	GCNNNNNNNGC	5 cut(s)	714, 764, 894, 1589, 1642
NciI	CCSGG	2 cut(s)	392, 704
NcoI	CCATGG	1 cut(s)	977
NdeII	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
NlaIV	GGNNCC	2 cut(s)	1385, 1394
NmeAIII	GCCGAG	1 cut(s)	824
NmuCI	GTSAC	2 cut(s)	1005, 1068
NspI	RCATGY	6 cut(s)	58, 109, 422, 1200, 1362, 1605
NspV	TTCGAA	1 cut(s)	1501
PaeI	GCATGC	1 cut(s)	58
PaeR7I	CTCGAG	1 cut(s)	1367
PaqCI	CACCTGC	1 cut(s)	1383
PciI	ACATGT	2 cut(s)	105, 1358
PciSI	GCTCTTC	2 cut(s)	1169, 1541
PctI	GAATGC	1 cut(s)	392
PdmI	GAANNNNTTC	2 cut(s)	525, 1163
PfeI	GAWTC	4 cut(s)	43, 95, 557, 1422
PflFI	GACNNNGTC	1 cut(s)	1922
PflMI	CCANNNNNTGG	1 cut(s)	1273
PkrI	GCNGC	7 cut(s)	82, 242, 245, 890, 961, 1488, 1594
PleI	GAGTC	7 cut(s)	206, 290, 293, 498, 713, 920, 1075
PpsI	GAGTC	7 cut(s)	206, 290, 293, 498, 713, 920, 1075
PpuMI	RGGWCCY	1 cut(s)	1384
PscI	ACATGT	2 cut(s)	105, 1358
Psp5II	RGGWCCY	1 cut(s)	1384
Psp6I	CCWGG	2 cut(s)	1266, 1930
PspGI	CCWGG	2 cut(s)	1266, 1930
PspN4I	GGNNCC	2 cut(s)	1385, 1394
PspPI	GGNCC	4 cut(s)	198, 507, 694, 1384
PspPPI	RGGWCCY	1 cut(s)	1384
PspXI	VCTCGAGB	1 cut(s)	1367
PstI	CTGCAG	1 cut(s)	1597
PsuI	RGATCY	1 cut(s)	1615
PsyI	GACNNNGTC	1 cut(s)	1922
PvuII	CAGCTG	3 cut(s)	243, 342, 962
RsaI	GTAC	2 cut(s)	846, 907
RsaNI	GTAC	2 cut(s)	845, 906
RseI	CAYNNNNRTG	1 cut(s)	155
SapI	GCTCTTC	2 cut(s)	1169, 1541
SaqAI	TTAA	8 cut(s)	132, 185, 822, 854, 969, 1260, 1808, 1817
SatI	GCNGC	7 cut(s)	81, 241, 244, 889, 960, 1487, 1593
Sau3AI	GATC	8 cut(s)	3, 136, 265, 371, 664, 981, 1173, 1615
Sau96I	GGNCC	4 cut(s)	198, 507, 694, 1384
SchI	GAGTC	7 cut(s)	206, 291, 293, 499, 713, 920, 1076
ScrFI	CCNGG	4 cut(s)	392, 704, 1268, 1932
SduI	GDGCHC	3 cut(s)	294, 318, 1374
SfaNI	GCATC	4 cut(s)	255, 764, 1277, 1579
SfcI	CTRYAG	1 cut(s)	1593
Sfr274I	CTCGAG	1 cut(s)	1367
SfuI	TTCGAA	1 cut(s)	1501
SinI	GGWCC	3 cut(s)	198, 507, 1384
SlaI	CTCGAG	1 cut(s)	1367
SmiMI	CAYNNNNRTG	1 cut(s)	155
SmlI	CTYRAG	5 cut(s)	311, 1367, 1466, 1571, 1714
SmoI	CTYRAG	5 cut(s)	311, 1367, 1466, 1571, 1714
SphI	GCATGC	1 cut(s)	58
SsiI	CCGC	4 cut(s)	40, 83, 357, 1681
SspMI	CTAG	4 cut(s)	764, 1193, 1388, 1580
StyD4I	CCNGG	4 cut(s)	390, 702, 1266, 1930
StyI	CCWWGG	4 cut(s)	378, 483, 977, 1387
TaiI	ACGT	3 cut(s)	276, 1761, 1923
TaqI	TCGA	8 cut(s)	268, 370, 1097, 1167, 1244, 1368, 1501, 1648
TfiI	GAWTC	4 cut(s)	43, 95, 557, 1422
Tru1I	TTAA	8 cut(s)	132, 185, 822, 854, 969, 1260, 1808, 1817
Tru9I	TTAA	8 cut(s)	132, 185, 822, 854, 969, 1260, 1808, 1817
TscAI	CASTG	4 cut(s)	456, 683, 952, 1216
TseFI	GTSAC	2 cut(s)	1005, 1068
TseI	GCWGC	7 cut(s)	80, 240, 243, 888, 959, 1486, 1592
Tsp45I	GTSAC	2 cut(s)	1005, 1068
TspDTI	ATGAA	5 cut(s)	518, 522, 606, 623, 1020
TspGWI	ACGGA	1 cut(s)	622
TspRI	CASTG	4 cut(s)	456, 683, 952, 1216
Tth111I	GACNNNGTC	1 cut(s)	1922
Van91I	CCANNNNNTGG	1 cut(s)	1273
VneI	GTGCAC	1 cut(s)	290
VpaK11BI	GGWCC	3 cut(s)	198, 507, 1384
XapI	RAATTY	4 cut(s)	181, 524, 881, 1294
XceI	RCATGY	6 cut(s)	58, 109, 422, 1200, 1362, 1605
XhoI	CTCGAG	1 cut(s)	1367
XmaJI	CCTAGG	1 cut(s)	1387
XmiI	GTMKAC	2 cut(s)	574, 1833
XmnI	GAANNNNTTC	2 cut(s)	525, 1163
XspI	CTAG	4 cut(s)	764, 1193, 1388, 1580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.