Rmu_sc0001706.1_g000035

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001706.1
OG0000540
Physical Location & Seq
Reverse (-)
144090 .. 146853
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001706.1_g000035.1.cds

Sequence Viewer

Length: 2610 bp
atggagacgctgagtcctatggttcaagttatactggacaaagtatctacgacaatgttgaatagagctcaagtcatagcaaagtttggagacgagtttgaccagctgagggaagggttagaaactacaagagacctactcgctgactcgatgaatcttcagagcaagtatgacaaggtcaagggtgccgtgagccaactaagagaagtaattgatgaagctgacgatgtattgacagattgcctggttcgagacatatacaaggaaaataagtcctccctacgtttctggtttcatgatccgggattctcaagtcgagtgggcaagcagttggtagatatcaattcgaaaatggacatggcacgtagtatcttgggcaaacatttgactattgcaaaatctacagcgcctgatagaacccatcatggtgaaagcgatgcaaaccagggtgaaagtgaaagggaattcatgtcacgcaattacgtcccacctgtgacctatggattggataaggacattaaaagtttgaaagagtggatgtttggcagtaccaacgggaaactcgactttgtgggcattgtggggatgggggggttgggcaaaaccaccattgccaagaaggtctttagtgatacacaagttatatctcactttaacaagatgatctgggtgtctgtttcacagaactttagtatgaggcggattctgaagtgcatgctggaaaaggcaaatctgcaagcagcggatgtttccgaatctgatgacatgttcaccagccttagacaaggacttaaagatcaatcctatctcattgtcatggatgatgtgtggcctcataaaaatttaaatagtttttggaccaacctctttgactcgctaccaacaaaagttgataaaagcagctgcatcataattactacaagggatcgagacgttgcaagagtcatggtgcaccaagactcacaaatacttgagccccctattctgaatgacagggacagctggtctttgttcagcggatttgcatttcgatcaaccaagggagaatgcccggatgagagctttgaggaggaagggcatgctatcgtgaagagatgtggtgggcttccactggcaatcaagacattaggaggttatttggccaaggagagtcgtccttctgagtggaccaagacaagagaaaaatttcattcattgacgaccgatggaaaaacagaatcacttacgctttgtctacaagtgagctatgatgaacttccaaacgatatgaagcaatgcctattgtgtctctccgtttatcctgaagactttgagatacacgctgatcagctgattcactggtggtttggagagggccttatccggggcaagaaaggcgactcaaaaacagcagtagaagtgggctacgaaaatctggcaaaactagccaatagatgcctattggaagtcgtggagcgccgaggctatgatggaaggattattaagttcaaattacacgatatggtacgggagttaataatcaggattgcagaaaaagagaaattttgcagcttcagcgaagaatgtacgcagatagggattgaagactctcggtggttatgtctcactgaagagatggcagctgaggttaagaagccatggatcaaaagaaagtcaaagatgaggtcacttttactgatatcaagcccttcattggttgacttcagcaagaactttgagttgttggagtcactcagggtattggacttgtctttctcgaagttagatgtgattattgttgaagatagcaacacagcctcttcagggatttgtgtagagaagctcttcgacatgatcacttctctgaaacgcctagcatttctaaacctcagtggagttcagaaactattagaactgccatcttcaattgagaaacttcttaacctccaggtcttggtgttgaatggatgcagaaatttaggcaaaatacacgccaaaatcacaagtttgaagaggcttgttgtcttggacattggaacatgtcccctcgagcacctgtctctggacctagggagcctttcttatcttcaagaactctctggattcagggtggtaagtcgggctaaaacacagggttgcacccttcttgagcttggaaaactggagcagctaagagttcttcgaattacaataggtgatgtggctgaaatctccgaaaaagaaaagaagagcctatcaagtctccagaacctcaaggttctagctattgatgctgcagatacatgcaatcaagaagatctggaaatgatagatgagctggagttgcctcgaaagatagaggagctgtatctcaggaattaccgctcccgaaaaatgccaaactggtttagtcccttgaggcttcctaaattgcattatctttctattgaggattgcgacgttgaaagcctaaaggacaactgctgttggaaaattgaaggtttgtatttaaaattgttaaatatgttagaggtagactggaatgacttgaagagggttgtgccagcattacactacatggagattagcagatgttccaaattgaaaaactttcccatcgacgtagtcaatccaggggtttggagaaagtga

Protein Analysis

869

Amino Acids

98.99

Weight (kDa)

6.23

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000540)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50950 AT3G50950
fragaria_vesca FvH4_1g12710 FvH4_1g12710 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820 FvH4_3g00820
malus_domestica MD02G1141100.v1.1 MD10G1333100.v1.1
prunus_persica Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.4G009300_v2.0.a1 Prupe.6G150700_v2.0.a1 Prupe.7G160100_v2.0.a1 Prupe.7G160100_v2.0.a1
pyrus_communis pycom02g11110 pycom10g28240 pycom10g28340 pycom10g28360 pycom10g28450
rosa_chinensis RchiOBHm_Chr2g0100711 RchiOBHm_Chr3g0485861 RchiOBHm_Chr4g0391451 RchiOBHm_Chr4g0391591 RchiOBHm_Chr4g0391601 RchiOBHm_Chr4g0391681 RchiOBHm_Chr5g0001141 RchiOBHm_Chr5g0001221
rosa_laevigata RLG00000017001
rosa_multiflora Rmu_co8260007.1_g000001 Rmu_co8260103.1_g000001 Rmu_co8519155.1_g000001 Rmu_sc0000060.1_g000050 Rmu_sc0000255.1_g000036 Rmu_sc0001174.1_g000023 Rmu_sc0001174.1_g000025 Rmu_sc0001659.1_g000009 Rmu_sc0001706.1_g000009 Rmu_sc0001706.1_g000024 Rmu_sc0001706.1_g000035 Rmu_sc0004189.1_g000018 Rmu_sc0004189.1_g000030 Rmu_sc0004862.1_g000002 Rmu_sc0004876.1_g000038 Rmu_sc0023741.1_g000004
rosa_roxburghii Rroxscaffold_1G00075100 Rroxscaffold_1G00075160 Rroxscaffold_1G00075210 Rroxscaffold_5G00337160 Rroxscaffold_5G00386590 Rroxscaffold_6G00396300
rosa_rugosa Rorug03G0336200 Rorug03G0336300 Rorug04G0389400
rosa_samantha Rh2AG140400 Rh2BG144100 Rh2CG145400 Rh2DG144900 Rh3AG271200 Rh4AG038000 Rh4AG038700 Rh4BG032000 Rh4BG032800 Rh4CG041100 Rh4CG041300 Rh4DG035500 Rh4DG035600 Rh5AG008800 Rh5AG009100 Rh5BG010900 Rh5BG011500 Rh5BG011600 Rh5BG012000 Rh5CG009400 Rh5CG010000 Rh5DG009800
rosa_wichuraiana Rw2G010940 Rw4G002950 Rw4G002990 Rw4G003000 Rw5G000880 Rw5G000950 Rw5G000960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 185
AccB7I CCANNNNNTGG 1 cut(s) 1933
AccBSI CCGCTC 1 cut(s) 2343
AccI GTMKAC 2 cut(s) 1234, 2493
AciI CCGC 4 cut(s) 700, 743, 1017, 2341
AclWI GGATC 3 cut(s) 293, 933, 1649
AcoI YGGCCR 1 cut(s) 1140
AcsI RAATTY 5 cut(s) 464, 841, 1184, 1541, 1954
AcuI CTGAAG 7 cut(s) 143, 728, 1323, 1537, 1629, 1687, 1785
AfaI GTAC 3 cut(s) 550, 1506, 1567
AfiI CCNNNNNNNGG 6 cut(s) 109, 1363, 1693, 1803, 1933, 2041
AflIII ACRYGT 2 cut(s) 765, 2018
AhdI GACNNNNNGTC 2 cut(s) 12, 1003
AjnI CCWGG 4 cut(s) 243, 444, 1926, 2590
Alw21I GWGCWC 3 cut(s) 70, 954, 2034
Alw26I GTCTC 8 cut(s) 84, 126, 246, 924, 1292, 1607, 2043, 2225
Alw44I GTGCAC 1 cut(s) 950
AlwI GGATC 3 cut(s) 293, 933, 1649
AlwNI CAGNNNCTG 1 cut(s) 410
Ama87I CYCGRG 1 cut(s) 2027
AoxI GGCC 3 cut(s) 830, 1140, 1354
ApaLI GTGCAC 1 cut(s) 950
ApeKI GCWGC 7 cut(s) 740, 900, 903, 1548, 1619, 2146, 2252
ApoI RAATTY 5 cut(s) 464, 841, 1184, 1541, 1954
ArsI GACNNNNNNTTYG 2 cut(s) 1649, 1681
Asp700I GAANNNNTTC 2 cut(s) 1185, 1823
AspA2I CCTAGG 1 cut(s) 2047
AspLEI GCGC 2 cut(s) 409, 1458
AspS9I GGNCC 4 cut(s) 858, 1167, 1354, 2044
AsuC2I CCSGG 3 cut(s) 303, 1052, 1364
AsuHPI GGTGA 4 cut(s) 440, 461, 763, 2186
AsuII TTCGAA 2 cut(s) 347, 2161
AvaI CYCGRG 1 cut(s) 2027
AvaII GGWCC 3 cut(s) 858, 1167, 2044
AvrII CCTAGG 1 cut(s) 2047
BaeGI GKGCMC 1 cut(s) 954
BaeI ACNNNNGTAYC 4 cut(s) 624, 657, 1496, 1529
BalI TGGCCA 1 cut(s) 1142
BanI GGYRCC 1 cut(s) 185
BanII GRGCYC 2 cut(s) 70, 978
BbsI GAAGAC 2 cut(s) 1311, 1590
Bbv12I GWGCWC 3 cut(s) 70, 954, 2034
BbvCI CCTCAGC 2 cut(s) 107, 1623
BbvI GCAGC 7 cut(s) 752, 890, 912, 1560, 1631, 2158, 2239
BccI CCATC 7 cut(s) 429, 580, 1199, 1463, 1609, 1906, 2582
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 4 cut(s) 245, 446, 1928, 2592
BclI TGATCA 2 cut(s) 1324, 1833
BcnI CCSGG 3 cut(s) 303, 1052, 1364
BcoDI GTCTC 8 cut(s) 84, 126, 246, 924, 1292, 1607, 2043, 2225
BfaI CTAG 4 cut(s) 1424, 1853, 2048, 2240
BfmI CTRYAG 2 cut(s) 402, 2253
BfoI RGCGCY 2 cut(s) 410, 1459
BglII AGATCT 1 cut(s) 2275
BisI GCNGC 7 cut(s) 741, 901, 904, 1549, 1620, 2147, 2253
BlnI CCTAGG 1 cut(s) 2047
BlsI GCNGC 7 cut(s) 742, 902, 905, 1550, 1621, 2148, 2254
Bme1390I CCNGG 7 cut(s) 245, 303, 446, 1052, 1364, 1928, 2592
Bme18I GGWCC 3 cut(s) 858, 1167, 2044
BmeRI GACNNNNNGTC 2 cut(s) 12, 1003
BmeT110I CYCGRG 1 cut(s) 2027
BmgT120I GGNCC 4 cut(s) 858, 1167, 1354, 2044
BmiI GGNNCC 2 cut(s) 187, 2054
BmrFI CCNGG 7 cut(s) 245, 303, 446, 1052, 1364, 1928, 2592
BmsI GCATC 5 cut(s) 427, 915, 1424, 1937, 2239
BpiI GAAGAC 2 cut(s) 1311, 1590
BplI GAGNNNNNCTC 2 cut(s) 123, 155
BpmI CTGGAG 4 cut(s) 1910, 2162, 2207, 2318
Bpu10I CCTNAGC 2 cut(s) 107, 1623
Bpu14I TTCGAA 2 cut(s) 347, 2161
BpuEI CTTGAG 6 cut(s) 54, 295, 992, 2147, 2216, 2395
BpuMI CCSGG 3 cut(s) 303, 1052, 1364
BsaAI YACGTR 1 cut(s) 365
BsaI GGTCTC 1 cut(s) 126
BsaJI CCNNGG 8 cut(s) 445, 1038, 1143, 1363, 1459, 1637, 2047, 2591
Bsc4I CCNNNNNNNGG 6 cut(s) 109, 1363, 1693, 1803, 1933, 2041
Bse1I ACTGG 6 cut(s) 39, 1116, 1343, 2145, 2366, 2501
Bse3DI GCAATG 2 cut(s) 609, 1280
BseBI CCWGG 4 cut(s) 245, 446, 1928, 2592
BseDI CCNNGG 8 cut(s) 445, 1038, 1143, 1363, 1459, 1637, 2047, 2591
BseGI GGATG 6 cut(s) 543, 591, 751, 826, 1060, 1952
BseLI CCNNNNNNNGG 6 cut(s) 109, 1363, 1693, 1803, 1933, 2041
BseMI GCAATG 2 cut(s) 609, 1280
BseMII CTCAG 6 cut(s) 98, 1152, 1614, 1747, 1882, 2344
BseNI ACTGG 6 cut(s) 39, 1116, 1343, 2145, 2366, 2501
BseRI GAGGAG 2 cut(s) 1082, 2333
BseSI GKGCMC 1 cut(s) 954
BseXI GCAGC 7 cut(s) 752, 890, 912, 1560, 1631, 2158, 2239
Bsh1285I CGRYCG 1 cut(s) 1203
BshFI GGCC 3 cut(s) 832, 1142, 1356
BshNI GGYRCC 1 cut(s) 185
BsiEI CGRYCG 1 cut(s) 1203
BsiHKAI GWGCWC 3 cut(s) 70, 954, 2034
BsiHKCI CYCGRG 1 cut(s) 2027
BsiSI CCGG 3 cut(s) 302, 1052, 1363
BslFI GGGAC 4 cut(s) 470, 1010, 2007, 2355
BslI CCNNNNNNNGG 6 cut(s) 109, 1363, 1693, 1803, 1933, 2041
BsmAI GTCTC 8 cut(s) 84, 126, 246, 924, 1292, 1607, 2043, 2225
BsmBI CGTCTC 2 cut(s) 84, 924
BsmFI GGGAC 4 cut(s) 470, 1010, 2007, 2355
BsmI GAATGC 1 cut(s) 1052
BsnI GGCC 3 cut(s) 832, 1142, 1356
Bso31I GGTCTC 1 cut(s) 126
BsoBI CYCGRG 1 cut(s) 2027
Bsp119I TTCGAA 2 cut(s) 347, 2161
Bsp1286I GDGCHC 4 cut(s) 70, 954, 978, 2034
Bsp143I GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
Bsp19I CCATGG 1 cut(s) 1637
BspACI CCGC 4 cut(s) 700, 743, 1017, 2341
BspANI GGCC 3 cut(s) 832, 1142, 1356
BspCNI CTCAG 6 cut(s) 99, 1153, 1615, 1746, 1881, 2343
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 2 cut(s) 187, 2054
BspMAI CTGCAG 1 cut(s) 2257
BspPI GGATC 3 cut(s) 293, 933, 1649
BspQI GCTCTTC 2 cut(s) 1829, 2201
BspT104I TTCGAA 2 cut(s) 347, 2161
BspT107I GGYRCC 1 cut(s) 185
BspTNI GGTCTC 1 cut(s) 126
BsrBI CCGCTC 1 cut(s) 2343
BsrDI GCAATG 2 cut(s) 609, 1280
BsrI ACTGG 6 cut(s) 39, 1116, 1343, 2145, 2366, 2501
BssECI CCNNGG 8 cut(s) 445, 1038, 1143, 1363, 1459, 1637, 2047, 2591
BssMI GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
BssT1I CCWWGG 4 cut(s) 1038, 1143, 1637, 2047
Bst2UI CCWGG 4 cut(s) 245, 446, 1928, 2592
Bst6I CTCTTC 7 cut(s) 1085, 1605, 1804, 1829, 1985, 2201, 2504
BstBAI YACGTR 1 cut(s) 365
BstBI TTCGAA 2 cut(s) 347, 2161
BstC8I GCNNGC 5 cut(s) 326, 716, 738, 1080, 2523
BstDSI CCRYGG 1 cut(s) 1637
BstF5I GGATG 6 cut(s) 543, 591, 751, 826, 1060, 1952
BstH2I RGCGCY 2 cut(s) 410, 1459
BstHHI GCGC 2 cut(s) 409, 1458
BstKTI GATC 9 cut(s) 301, 666, 799, 928, 1034, 1327, 1644, 1836, 2278
BstMAI GTCTC 8 cut(s) 84, 126, 246, 924, 1292, 1607, 2043, 2225
BstMBI GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
BstMCI CGRYCG 1 cut(s) 1203
BstMWI GCNNNNNNNGC 5 cut(s) 1374, 1424, 1554, 2249, 2302
BstNI CCWGG 4 cut(s) 245, 446, 1928, 2592
BstNSI RCATGY 5 cut(s) 718, 769, 1082, 2022, 2265
BstSCI CCNGG 7 cut(s) 243, 301, 444, 1050, 1362, 1926, 2590
BstSFI CTRYAG 2 cut(s) 402, 2253
BstSLI GKGCMC 1 cut(s) 954
BstV1I GCAGC 7 cut(s) 752, 890, 912, 1560, 1631, 2158, 2239
BstV2I GAAGAC 2 cut(s) 1311, 1590
BstX2I RGATCY 1 cut(s) 2275
BstXI CCANNNNNNTGG 1 cut(s) 2598
BstYI RGATCY 1 cut(s) 2275
BsuRI GGCC 3 cut(s) 832, 1142, 1356
BtgI CCRYGG 1 cut(s) 1637
BtgZI GCGATG 1 cut(s) 450
BtsCI GGATG 6 cut(s) 543, 591, 751, 826, 1060, 1952
BtsIMutI CAGTG 4 cut(s) 1109, 1336, 1605, 1876
Cac8I GCNNGC 5 cut(s) 326, 716, 738, 1080, 2523
CaiI CAGNNNCTG 1 cut(s) 410
CciI TCATGA 1 cut(s) 295
CfoI GCGC 2 cut(s) 409, 1458
Cfr13I GGNCC 4 cut(s) 858, 1167, 1354, 2044
CseI GACGC 1 cut(s) 16
Csp6I GTAC 3 cut(s) 549, 1505, 1566
CspCI CAANNNNNGTGG 2 cut(s) 300, 335
CviQI GTAC 3 cut(s) 549, 1505, 1566
DpnI GATC 9 cut(s) 300, 665, 798, 927, 1033, 1326, 1643, 1835, 2277
DpnII GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
DraI TTTAAA 2 cut(s) 846, 2469
DriI GACNNNNNGTC 2 cut(s) 12, 1003
EaeI YGGCCR 1 cut(s) 1140
Eam1104I CTCTTC 7 cut(s) 1085, 1605, 1804, 1829, 1985, 2201, 2504
Eam1105I GACNNNNNGTC 2 cut(s) 12, 1003
EarI CTCTTC 7 cut(s) 1085, 1605, 1804, 1829, 1985, 2201, 2504
EciI GGCGGA 1 cut(s) 715
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 4 cut(s) 1038, 1143, 1637, 2047
Eco24I GRGCYC 2 cut(s) 70, 978
Eco31I GGTCTC 1 cut(s) 126
Eco32I GATATC 2 cut(s) 340, 1680
Eco47I GGWCC 3 cut(s) 858, 1167, 2044
Eco53kI GAGCTC 1 cut(s) 68
Eco57I CTGAAG 7 cut(s) 143, 728, 1323, 1537, 1629, 1687, 1785
Eco88I CYCGRG 1 cut(s) 2027
EcoICRI GAGCTC 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 1354
EcoRI GAATTC 1 cut(s) 464
EcoRII CCWGG 4 cut(s) 243, 444, 1926, 2590
EcoRV GATATC 2 cut(s) 340, 1680
EcoT14I CCWWGG 4 cut(s) 1038, 1143, 1637, 2047
EcoT38I GRGCYC 2 cut(s) 70, 978
ErhI CCWWGG 4 cut(s) 1038, 1143, 1637, 2047
Esp3I CGTCTC 2 cut(s) 84, 924
FalI AAGNNNNNCTT 2 cut(s) 608, 640
FaqI GGGAC 4 cut(s) 470, 1010, 2007, 2355
FbaI TGATCA 2 cut(s) 1324, 1833
FblI GTMKAC 2 cut(s) 1234, 2493
Fnu4HI GCNGC 7 cut(s) 741, 901, 904, 1549, 1620, 2147, 2253
FokI GGATG 6 cut(s) 550, 598, 758, 833, 1067, 1959
FriOI GRGCYC 2 cut(s) 70, 978
Fsp4HI GCNGC 7 cut(s) 741, 901, 904, 1549, 1620, 2147, 2253
FspBI CTAG 4 cut(s) 1424, 1853, 2048, 2240
GlaI GCGC 2 cut(s) 408, 1457
GluI GCNGC 7 cut(s) 741, 901, 904, 1549, 1620, 2147, 2253
GsuI CTGGAG 4 cut(s) 1910, 2162, 2207, 2318
HaeII RGCGCY 2 cut(s) 410, 1459
HaeIII GGCC 3 cut(s) 832, 1142, 1356
HapII CCGG 3 cut(s) 302, 1052, 1363
HgaI GACGC 1 cut(s) 16
HhaI GCGC 2 cut(s) 409, 1458
Hin6I GCGC 2 cut(s) 407, 1456
HinP1I GCGC 2 cut(s) 407, 1456
HincII GTYRAC 1 cut(s) 1699
HindII GTYRAC 1 cut(s) 1699
HpaII CCGG 3 cut(s) 302, 1052, 1363
HphI GGTGA 4 cut(s) 440, 461, 763, 2186
Hpy166II GTNNAC 6 cut(s) 771, 952, 1167, 1235, 1699, 2494
Hpy188I TCNGA 9 cut(s) 162, 708, 754, 760, 987, 1162, 1845, 1881, 2194
Hpy8I GTNNAC 6 cut(s) 771, 952, 1167, 1235, 1699, 2494
Hpy99I CGWCG 2 cut(s) 2420, 2582
HpyAV CCTTC 8 cut(s) 107, 613, 1067, 1167, 1467, 1698, 2132, 2450
HpyCH4IV ACGT 6 cut(s) 283, 364, 483, 933, 2418, 2580
HpyF10VI GCNNNNNNNGC 5 cut(s) 1374, 1424, 1554, 2249, 2302
HpySE526I ACGT 6 cut(s) 283, 364, 483, 933, 2418, 2580
HspAI GCGC 2 cut(s) 407, 1456
Ksp22I TGATCA 2 cut(s) 1324, 1833
Kzo9I GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
LguI GCTCTTC 2 cut(s) 1829, 2201
LmnI GCTCC 5 cut(s) 1453, 2052, 2143, 2320, 2348
Lsp1109I GCAGC 7 cut(s) 752, 890, 912, 1560, 1631, 2158, 2239
LweI GCATC 5 cut(s) 427, 915, 1424, 1937, 2239
MaeI CTAG 4 cut(s) 1424, 1853, 2048, 2240
MaeII ACGT 6 cut(s) 283, 364, 483, 933, 2418, 2580
MaeIII GTNAC 4 cut(s) 471, 493, 1665, 1728
MalI GATC 9 cut(s) 300, 665, 798, 927, 1033, 1326, 1643, 1835, 2277
MbiI CCGCTC 1 cut(s) 2343
MboI GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
MfeI CAATTG 1 cut(s) 1905
MflI RGATCY 1 cut(s) 2275
MhlI GDGCHC 4 cut(s) 70, 954, 978, 2034
MlsI TGGCCA 1 cut(s) 1142
MluNI TGGCCA 1 cut(s) 1142
MlyI GAGTC 9 cut(s) 22, 140, 866, 951, 953, 1159, 1373, 1580, 1736
MmeI TCCRAC 2 cut(s) 1704, 2426
Mox20I TGGCCA 1 cut(s) 1142
MroXI GAANNNNTTC 2 cut(s) 1185, 1823
MscI TGGCCA 1 cut(s) 1142
MslI CAYNNNNRTG 2 cut(s) 426, 815
Msp20I TGGCCA 1 cut(s) 1142
MspA1I CMGCKG 7 cut(s) 106, 743, 903, 1002, 1017, 1330, 1622
MspI CCGG 3 cut(s) 302, 1052, 1363
MspR9I CCNGG 7 cut(s) 245, 303, 446, 1052, 1364, 1928, 2592
MunI CAATTG 1 cut(s) 1905
Mva1269I GAATGC 1 cut(s) 1052
MvaI CCWGG 4 cut(s) 245, 446, 1928, 2592
MwoI GCNNNNNNNGC 5 cut(s) 1374, 1424, 1554, 2249, 2302
NciI CCSGG 3 cut(s) 303, 1052, 1364
NcoI CCATGG 1 cut(s) 1637
NdeII GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
NlaIV GGNNCC 2 cut(s) 187, 2054
NmeAIII GCCGAG 1 cut(s) 1484
NmuCI GTSAC 4 cut(s) 471, 493, 1665, 1728
NspI RCATGY 5 cut(s) 718, 769, 1082, 2022, 2265
NspV TTCGAA 2 cut(s) 347, 2161
PaeI GCATGC 2 cut(s) 718, 1082
PaeR7I CTCGAG 1 cut(s) 2027
PagI TCATGA 1 cut(s) 295
PciI ACATGT 2 cut(s) 765, 2018
PciSI GCTCTTC 2 cut(s) 1829, 2201
PcsI WCGNNNNNNNCGW 1 cut(s) 561
PctI GAATGC 1 cut(s) 1052
PdmI GAANNNNTTC 2 cut(s) 1185, 1823
PfeI GAWTC 7 cut(s) 154, 306, 703, 755, 1217, 1333, 2082
PflFI GACNNNGTC 2 cut(s) 176, 2582
PflMI CCANNNNNTGG 1 cut(s) 1933
PfoI TCCNGGA 1 cut(s) 301
PkrI GCNGC 7 cut(s) 742, 902, 905, 1550, 1621, 2148, 2254
PleI GAGTC 9 cut(s) 21, 140, 866, 950, 953, 1158, 1373, 1580, 1735
PpsI GAGTC 9 cut(s) 21, 140, 866, 950, 953, 1158, 1373, 1580, 1735
Ppu21I YACGTR 1 cut(s) 365
PscI ACATGT 2 cut(s) 765, 2018
Psp124BI GAGCTC 1 cut(s) 70
Psp6I CCWGG 4 cut(s) 243, 444, 1926, 2590
PspGI CCWGG 4 cut(s) 243, 444, 1926, 2590
PspN4I GGNNCC 2 cut(s) 187, 2054
PspPI GGNCC 4 cut(s) 858, 1167, 1354, 2044
PspXI VCTCGAGB 1 cut(s) 2027
PstI CTGCAG 1 cut(s) 2257
PstNI CAGNNNCTG 1 cut(s) 410
PsuI RGATCY 1 cut(s) 2275
PsyI GACNNNGTC 2 cut(s) 176, 2582
PvuII CAGCTG 5 cut(s) 106, 903, 1002, 1330, 1622
RsaI GTAC 3 cut(s) 550, 1506, 1567
RsaNI GTAC 3 cut(s) 549, 1505, 1566
RseI CAYNNNNRTG 2 cut(s) 426, 815
SacI GAGCTC 1 cut(s) 70
SapI GCTCTTC 2 cut(s) 1829, 2201
SatI GCNGC 7 cut(s) 741, 901, 904, 1549, 1620, 2147, 2253
Sau3AI GATC 9 cut(s) 298, 663, 796, 925, 1031, 1324, 1641, 1833, 2275
Sau96I GGNCC 4 cut(s) 858, 1167, 1354, 2044
SchI GAGTC 9 cut(s) 22, 140, 866, 951, 953, 1159, 1373, 1580, 1736
ScrFI CCNGG 7 cut(s) 245, 303, 446, 1052, 1364, 1928, 2592
SduI GDGCHC 4 cut(s) 70, 954, 978, 2034
SfaNI GCATC 5 cut(s) 427, 915, 1424, 1937, 2239
SfcI CTRYAG 2 cut(s) 402, 2253
Sfr274I CTCGAG 1 cut(s) 2027
SfuI TTCGAA 2 cut(s) 347, 2161
SinI GGWCC 3 cut(s) 858, 1167, 2044
SlaI CTCGAG 1 cut(s) 2027
SmiI ATTTAAAT 1 cut(s) 846
SmiMI CAYNNNNRTG 2 cut(s) 426, 815
SmlI CTYRAG 7 cut(s) 69, 310, 971, 2027, 2126, 2231, 2374
SmoI CTYRAG 7 cut(s) 69, 310, 971, 2027, 2126, 2231, 2374
SphI GCATGC 2 cut(s) 718, 1082
SsiI CCGC 4 cut(s) 700, 743, 1017, 2341
SspMI CTAG 4 cut(s) 1424, 1853, 2048, 2240
SstI GAGCTC 1 cut(s) 70
StyD4I CCNGG 7 cut(s) 243, 301, 444, 1050, 1362, 1926, 2590
StyI CCWWGG 4 cut(s) 1038, 1143, 1637, 2047
SwaI ATTTAAAT 1 cut(s) 846
TaiI ACGT 6 cut(s) 286, 367, 486, 936, 2421, 2583
TaqII GACCGA 1 cut(s) 1217
TfiI GAWTC 7 cut(s) 154, 306, 703, 755, 1217, 1333, 2082
TscAI CASTG 4 cut(s) 1116, 1343, 1612, 1876
TseFI GTSAC 4 cut(s) 471, 493, 1665, 1728
TseI GCWGC 7 cut(s) 740, 900, 903, 1548, 1619, 2146, 2252
Tsp45I GTSAC 4 cut(s) 471, 493, 1665, 1728
TspDTI ATGAA 9 cut(s) 167, 231, 284, 457, 1178, 1182, 1266, 1283, 1680
TspGWI ACGGA 1 cut(s) 1282
TspRI CASTG 4 cut(s) 1116, 1343, 1612, 1876
Tth111I GACNNNGTC 2 cut(s) 176, 2582
Van91I CCANNNNNTGG 1 cut(s) 1933
VneI GTGCAC 1 cut(s) 950
VpaK11BI GGWCC 3 cut(s) 858, 1167, 2044
XapI RAATTY 5 cut(s) 464, 841, 1184, 1541, 1954
XceI RCATGY 5 cut(s) 718, 769, 1082, 2022, 2265
XhoI CTCGAG 1 cut(s) 2027
XmaJI CCTAGG 1 cut(s) 2047
XmiI GTMKAC 2 cut(s) 1234, 2493
XmnI GAANNNNTTC 2 cut(s) 1185, 1823
XspI CTAG 4 cut(s) 1424, 1853, 2048, 2240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.